Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Marchf1 (membrane associated ring-CH-type finger 1) Rattus norvegicus
Analyze
Symbol: Marchf1
Name: membrane associated ring-CH-type finger 1
Description: Predicted to have MHC protein binding activity and ubiquitin protein ligase activity. Predicted to be involved in antigen processing and presentation of peptide antigen via MHC class II; immune response; and protein polyubiquitination. Predicted to localize to the bounding membrane of organelle; endoplasmic reticulum membrane; and plasma membrane. Orthologous to human MARCHF1 (membrane associated ring-CH-type finger 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 4,4'-diaminodiphenylmethane; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: E3 ubiquitin-protein ligase MARCH1; LOC361135; March1; membrane-associated ring finger (C3HC4) 1; membrane-associated ring finger (C3HC4) 1, E3 ubiquitin protein ligase; RGD1305148; similar to hypothetical protein FLJ20668
Orthologs:
Homo sapiens (human) : MARCHF1 (membrane associated ring-CH-type finger 1)  HGNC  Alliance
Mus musculus (house mouse) : Marchf1 (membrane associated ring-CH-type finger 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Marchf1 (membrane associated ring-CH-type finger 1)
Pan paniscus (bonobo/pygmy chimpanzee) : MARCHF1 (membrane associated ring-CH-type finger 1)
Canis lupus familiaris (dog) : MARCHF1 (membrane associated ring-CH-type finger 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Marchf1 (membrane associated ring-CH-type finger 1)
Sus scrofa (pig) : MARCHF1 (membrane associated ring-CH-type finger 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01624,998,709 - 25,856,327 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1625,001,666 - 25,192,675 (-)Ensembl
Rnor_5.01624,882,375 - 25,407,999 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41624,971,361 - 25,496,590 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11624,971,358 - 25,055,466 (-)NCBI
Celera1623,375,326 - 23,888,905 (-)NCBICelera
Cytogenetic Map16p14-p13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Marchf1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1305148
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.