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Gene: Elk1 (ETS transcription factor ELK1) Ictidomys tridecemlineatus

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Symbol:

Elk1

Name:

ETS transcription factor ELK1

RGD ID:

12589631

Description:

ENCODES a protein that exhibits chromatin binding (ortholog); double-stranded DNA binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to gamma radiation (ortholog); cellular response to lipid (ortholog); cellular response to testosterone stimulus (ortholog); PARTICIPATES IN adenosine signaling pathway; hypoxia inducible factor pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); anxiety disorder (ortholog); autistic disorder (ortholog); FOUND IN axon terminus (ortholog); dendrite (ortholog); mitochondrial membrane (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

ELK1, ETS transcription factor; ELK1, ETS transcription factor, transcript variant X1; ELK1, ETS transcription factor, transcript variant X2; ELK1, ETS transcription factor, transcript variant X3; ETS domain-containing protein Elk-1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	33,561,981 - 33,577,464 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936502	13,402,728 - 13,418,214 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936502	13,402,726 - 13,418,214 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Elk1	Squirrel	Alzheimer's disease		ISO	ELK1 (Homo sapiens)	9068941		RGD	PMID:20126313 and REF_RGD_ID:7488914
Elk1	Squirrel	anxiety disorder	ameliorates	ISO	Elk1 (Rattus norvegicus)	9068941	associated with alcohol use disorder	RGD	PMID:18322102 and REF_RGD_ID:401938616
Elk1	Squirrel	Brain Injuries		ISO	Elk1 (Rattus norvegicus)	9068941		RGD	PMID:15362724 and REF_RGD_ID:7488910
Elk1	Squirrel	Fetal Growth Retardation		ISO	ELK1 (Homo sapiens)	9068941	mRNA:decreased expression:placenta	RGD	PMID:20008130 and REF_RGD_ID:7488901
Elk1	Squirrel	Huntington's disease		ISO	ELK1 (Homo sapiens)	9068941		RGD	PMID:20126313 and REF_RGD_ID:7488914
Elk1	Squirrel	Lewy body dementia		ISO	ELK1 (Homo sapiens)	9068941		RGD	PMID:20126313 and REF_RGD_ID:7488914
Elk1	Squirrel	schizophrenia		ISO	ELK1 (Homo sapiens)	9068941	protein:increased expression:cerebellar vermis	RGD	PMID:10891039 and REF_RGD_ID:10047412
Elk1	Squirrel	transient cerebral ischemia	treatment	ISO	Elk1 (Rattus norvegicus)	9068941		RGD	PMID:17091294 and REF_RGD_ID:7488902

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Elk1	Squirrel	autistic disorder		ISO	ELK1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Autism	ClinVar	PMID:21681106 and PMID:30208311
Elk1	Squirrel	congenital disorder of glycosylation type IIm		ISO	ELK1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 22	ClinVar	PMID:28492532
Elk1	Squirrel	immune dysregulation-polyendocrinopathy-enteropathy-X-linked syndrome		ISO	ELK1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Insulin-dependent diabetes mellitus secretory diarrhea syndrome	ClinVar	PMID:11137992 more ...
Elk1	Squirrel	neurodegeneration with brain iron accumulation 5		ISO	ELK1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Beta-propeller protein-associated neurodegeneration	ClinVar	PMID:28492532
Elk1	Squirrel	syndromic X-linked intellectual disability Lubs type		ISO	ELK1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Syndromic X-linked intellectual disability Lubs type	ClinVar	PMID:25741868
Elk1	Squirrel	X-linked epilepsy with variable learning disabilities and behavior disorders		ISO	ELK1 (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:28492532
Elk1	Squirrel	X-linked severe congenital neutropenia		ISO	ELK1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: X-linked severe congenital neutropenia	ClinVar	PMID:10698340 more ...

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Elk1	Squirrel	cell differentiation	involved_in	IEA	PANTHER:PTN001723768	150520179		TreeGrafter	GO_REF:0000118
Elk1	Squirrel	cellular response to gamma radiation		ISO	Elk1 (Rattus norvegicus)	9068941		RGD	PMID:17949253 and REF_RGD_ID:7488908
Elk1	Squirrel	cellular response to lipid		ISO	Elk1 (Rattus norvegicus)	9068941		RGD	PMID:18768922 and REF_RGD_ID:7488907
Elk1	Squirrel	cellular response to testosterone stimulus		ISO	Elk1 (Rattus norvegicus)	9068941		RGD	PMID:14766003 and REF_RGD_ID:7488909
Elk1	Squirrel	gene expression	acts_upstream_of_or_within	IEA	UniProtKB:P41969 and ensembl:ENSMUSP00000009550	150520179		Ensembl	GO_REF:0000107
Elk1	Squirrel	hippocampal neuron apoptotic process		ISO	Elk1 (Rattus norvegicus)	9068941		RGD	PMID:16549787 and REF_RGD_ID:7488911
Elk1	Squirrel	liver development	acts_upstream_of_or_within	IEA	UniProtKB:P41969 and ensembl:ENSMUSP00000009550	150520179		Ensembl	GO_REF:0000107
Elk1	Squirrel	lung development	acts_upstream_of_or_within	IEA	UniProtKB:P41969 and ensembl:ENSMUSP00000009550	150520179		Ensembl	GO_REF:0000107
Elk1	Squirrel	positive regulation of DNA-templated transcription	acts_upstream_of_or_within	IEA	UniProtKB:P19419 more ...	150520179		Ensembl	GO_REF:0000107
Elk1	Squirrel	positive regulation of DNA-templated transcription	involved_in	ISO	ELK1 (Homo sapiens)	9068941	PMID:17296730	UniProt	PMID:17296730
Elk1	Squirrel	positive regulation of DNA-templated transcription	involved_in	ISO	ELK1 (Homo sapiens)	9068941	PMID:31146003	ARUK-UCL	PMID:31146003
Elk1	Squirrel	positive regulation of transcription by RNA polymerase II	acts_upstream_of_or_within	ISO	Elk1 (Rattus norvegicus)	9068941	PMID:19029245	MGI	PMID:19029245 and REF_RGD_ID:8553977
Elk1	Squirrel	positive regulation of transcription by RNA polymerase II	involved_in	IEA	UniProtKB:P19419 and ensembl:ENSP00000366182	150520179		Ensembl	GO_REF:0000107
Elk1	Squirrel	regulation of DNA-templated transcription	involved_in	IEA	InterPro:IPR000418	150520179		InterPro	GO_REF:0000002
Elk1	Squirrel	regulation of DNA-templated transcription	acts_upstream_of_or_within	IEA	UniProtKB:P41969 and ensembl:ENSMUSP00000009550	150520179		Ensembl	GO_REF:0000107
Elk1	Squirrel	regulation of transcription by RNA polymerase II	involved_in	IEA	InterPro:IPR046328	150520179		InterPro	GO_REF:0000002
Elk1	Squirrel	regulation of transcription by RNA polymerase II	involved_in	IEA	PANTHER:PTN001723768	150520179		TreeGrafter	GO_REF:0000118
Elk1	Squirrel	response to ethanol		ISO	Elk1 (Rattus norvegicus)	9068941		RGD	PMID:18322102 and REF_RGD_ID:401938616
Elk1	Squirrel	response to fibroblast growth factor	involved_in	ISO	Elk1 (Rattus norvegicus)	9068941	PMID:17156131	UniProt	PMID:17156131 and REF_RGD_ID:10054080
Elk1	Squirrel	response to light stimulus		ISO	Elk1 (Rattus norvegicus)	9068941		RGD	PMID:10383826 and REF_RGD_ID:7488912

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Elk1	Squirrel	axon terminus		ISO	Elk1 (Rattus norvegicus)	9068941		RGD	PMID:9412502 and REF_RGD_ID:7488913
Elk1	Squirrel	dendrite		ISO	Elk1 (Rattus norvegicus)	9068941		RGD	PMID:16549787 and REF_RGD_ID:7488911
Elk1	Squirrel	mitochondrial membrane		ISO	Elk1 (Rattus norvegicus)	9068941	ex vivo electron microscopy MMO:0000110	RGD	PMID:16549787 and REF_RGD_ID:7488911
Elk1	Squirrel	neuronal cell body		ISO	Elk1 (Rattus norvegicus)	9068941		RGD	PMID:16549787 and REF_RGD_ID:7488911
Elk1	Squirrel	nucleoplasm	located_in	IEA	UniProtKB:P19419 and ensembl:ENSP00000366182	150520179		Ensembl	GO_REF:0000107
Elk1	Squirrel	nucleus	located_in	IEA	UniProtKB-SubCell:SL-0191	150520179		UniProt	GO_REF:0000044
Elk1	Squirrel	nucleus	located_in	IEA	PANTHER:PTN001723768	150520179		TreeGrafter	GO_REF:0000118
Elk1	Squirrel	nucleus	located_in	IEA	UniProtKB:P19419 and ensembl:ENSP00000366182	150520179		Ensembl	GO_REF:0000107
Elk1	Squirrel	nucleus	located_in	IEA	UniProtKB-KW:KW-0539	150520179		UniProt	GO_REF:0000043

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Elk1	Squirrel	chromatin binding		ISO	Elk1 (Rattus norvegicus)	9068941		RGD	PMID:18768922 and REF_RGD_ID:7488907
Elk1	Squirrel	DNA binding	enables	IEA	UniProtKB-KW:KW-0238	150520179		UniProt	GO_REF:0000043
Elk1	Squirrel	DNA-binding transcription activator activity, RNA polymerase II-specific	enables	IEA	UniProtKB:P19419 and ensembl:ENSP00000366182	150520179		Ensembl	GO_REF:0000107
Elk1	Squirrel	DNA-binding transcription factor activity	enables	IEA	InterPro:IPR000418 and InterPro:IPR046328	150520179		InterPro	GO_REF:0000002
Elk1	Squirrel	DNA-binding transcription factor activity	enables	IEA	UniProtKB:P19419 more ...	150520179		Ensembl	GO_REF:0000107
Elk1	Squirrel	DNA-binding transcription factor activity, RNA polymerase II-specific	enables	IEA	UniProtKB:P19419 and ensembl:ENSP00000366182	150520179		Ensembl	GO_REF:0000107
Elk1	Squirrel	DNA-binding transcription factor activity, RNA polymerase II-specific	enables	IEA	PANTHER:PTN001723768	150520179		TreeGrafter	GO_REF:0000118
Elk1	Squirrel	double-stranded DNA binding		ISO	Elk1 (Rattus norvegicus)	9068941		RGD	PMID:11557580 and REF_RGD_ID:628487
Elk1	Squirrel	mediator complex binding	enables	IEA	UniProtKB:P41969 and ensembl:ENSMUSP00000009550	150520179		Ensembl	GO_REF:0000107
Elk1	Squirrel	protein binding	enables	ISO	UniProtKB:O00358	9068941	PMID:27852061	IntAct	PMID:27852061
Elk1	Squirrel	protein binding	enables	ISO	UniProtKB:P63165	9068941	PMID:19684601	IntAct	PMID:19684601
Elk1	Squirrel	protein binding	enables	ISO	UniProtKB:P63165 and UniProtKB:P63279	9068941	PMID:17036045 and PMID:23395904	IntAct	PMID:17036045 and PMID:23395904
Elk1	Squirrel	protein binding	enables	ISO	UniProtKB:P05067 and UniProtKB:Q06787-7	9068941	PMID:32814053	IntAct	PMID:32814053
Elk1	Squirrel	protein binding	enables	ISO	UniProtKB:P27361	9068941	PMID:16291755 and PMID:25241761	IntAct	PMID:16291755 and PMID:25241761
Elk1	Squirrel	protein binding	enables	ISO	UniProtKB:Q16236	9068941	PMID:32911434	IntAct	PMID:32911434
Elk1	Squirrel	protein binding	enables	ISO	UniProtKB:Q9UI95	9068941	PMID:17296730	UniProt	PMID:17296730
Elk1	Squirrel	protein binding	enables	ISO	UniProtKB:P30275	9068941	PMID:16549787	IntAct	PMID:16549787
Elk1	Squirrel	RNA polymerase II cis-regulatory region sequence-specific DNA binding		ISO	Elk1 (Rattus norvegicus)	9068941		RGD	PMID:11557580 and REF_RGD_ID:628487
Elk1	Squirrel	RNA polymerase II cis-regulatory region sequence-specific DNA binding	enables	IEA	UniProtKB:P19419 and ensembl:ENSP00000366182	150520179		Ensembl	GO_REF:0000107
Elk1	Squirrel	RNA polymerase II-specific DNA-binding transcription factor binding	enables	IEA	UniProtKB:P19419 and ensembl:ENSP00000366182	150520179		Ensembl	GO_REF:0000107
Elk1	Squirrel	sequence-specific DNA binding	enables	IEA	InterPro:IPR000418	150520179		InterPro	GO_REF:0000002
Elk1	Squirrel	sequence-specific double-stranded DNA binding	enables	IEA	UniProtKB:P19419 and ensembl:ENSP00000366182	150520179		Ensembl	GO_REF:0000107
Elk1	Squirrel	transcription cis-regulatory region binding	enables	IEA	UniProtKB:P19419 and ensembl:ENSP00000366182	150520179		Ensembl	GO_REF:0000107
Elk1	Squirrel	transcription regulator activator activity	enables	IEA	UniProtKB:P41969 and ensembl:ENSMUSP00000009550	150520179		Ensembl	GO_REF:0000107
Elk1	Squirrel	transcription regulator inhibitor activity	enables	IEA	UniProtKB:P41969 and ensembl:ENSMUSP00000009550	150520179		Ensembl	GO_REF:0000107

Imported Annotations - SMPDB

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Elk1	Squirrel	adenosine signaling pathway		ISO	ELK1 (Homo sapiens)	9068941		SMPDB	SMP:00320 and SMP:00321

Imported Annotations - PID (archival)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Elk1	Squirrel	hypoxia inducible factor pathway		ISO	ELK1 (Homo sapiens)	9068941		PID	PID:200036
Elk1	Squirrel	platelet-derived growth factor signaling pathway		ISO	ELK1 (Homo sapiens)	9068941		PID	PID:200149 and PID:200162
Elk1	Squirrel	sphingosine 1-phosphate signaling pathway		ISO	ELK1 (Homo sapiens)	9068941		PID	PID:200211

PMID:22301074	PMID:30032202

Elk1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	33,561,981 - 33,577,464 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936502	13,402,728 - 13,418,214 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936502	13,402,726 - 13,418,214 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ELK1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	47,635,520 - 47,650,604 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	47,635,520 - 47,650,604 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	X	47,494,919 - 47,510,003 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	47,379,864 - 47,394,964 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	X	47,251,173 - 47,266,274	NCBI
Celera	X	51,690,183 - 51,705,266 (-)	NCBI		Celera
Cytogenetic Map	X	p11.23	NCBI
HuRef	X	45,207,767 - 45,222,756 (-)	NCBI		HuRef
CHM1_1	X	47,526,023 - 47,541,139 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	X	47,045,421 - 47,060,507 (-)	NCBI		T2T-CHM13v2.0

Elk1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	20,799,634 - 20,816,847 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	20,799,634 - 20,816,847 (-)	Ensembl		GRCm39 Ensembl
GRCm38	X	20,933,395 - 20,950,608 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	20,933,395 - 20,950,608 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	X	20,510,521 - 20,527,726 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	X	20,091,886 - 20,107,552 (-)	NCBI		MGSCv36	mm8
Celera	X	19,067,257 - 19,084,739 (-)	NCBI		Celera
Cytogenetic Map	X	A1.3	NCBI
cM Map	X	16.45	NCBI

Elk1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	3,692,367 - 3,709,252 (+)	NCBI		GRCr8
mRatBN7.2	X	1,138,826 - 1,155,713 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	1,139,756 - 1,155,713 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	X	1,167,915 - 1,183,790 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	4,643,607 - 4,659,482 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	964,852 - 980,733 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	1,287,875 - 1,304,822 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	1,297,099 - 1,304,822 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	X	2,102,893 - 2,119,843 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	X	12,597,863 - 12,604,248 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	X	1,708,719 - 1,724,604 (+)	NCBI		Celera
Cytogenetic Map	X	q11	NCBI

Elk1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955516	430,775 - 444,871 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955516	431,081 - 444,871 (+)	NCBI	ChiLan1.0	ChiLan1.0

ELK1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	49,261,994 - 49,277,081 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	49,265,366 - 49,280,456 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	40,071,433 - 40,086,518 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	47,967,492 - 47,982,590 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	X	47,967,492 - 47,982,579 (-)	Ensembl	panpan1.1		panPan2

ELK1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	41,256,205 - 41,270,656 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	41,257,482 - 41,270,776 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	X	15,630,809 - 15,645,355 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	X	41,390,004 - 41,404,542 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	41,390,011 - 41,404,542 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	X	41,377,550 - 41,392,091 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	41,365,833 - 41,380,367 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	41,458,515 - 41,473,055 (-)	NCBI		UU_Cfam_GSD_1.0

ELK1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	42,157,988 - 42,174,951 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	X	42,157,980 - 42,174,964 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	47,303,918 - 47,320,907 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

LOC103231899
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	X	44,812,681 - 44,827,657 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666868	398 - 6,908 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Elk1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624978	194,992 - 208,103 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624978	194,985 - 208,105 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	XM_005324028	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013358019	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021725593	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040279106	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000614	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSTOT00000009930 ⟹ ENSSTOP00000008908

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936502	13,402,728 - 13,418,214 (-)	Ensembl

RefSeq Acc Id:

XM_005324028 ⟹ XP_005324085

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	X	33,561,981 - 33,577,464 (-)	NCBI
SpeTri2.0	NW_004936502	13,402,734 - 13,418,214 (-)	NCBI

Sequence:

show sequence

CGCCGCACCACGCACAGGTACCTCTGGGATGGCGTGAGCGCTTCCCCAGCGATGGACCCATCTGTGACGCTGTGGCAGTTTCTGCTGCAGCTTTTGAGAGAGCAAGGCAATGGCCACATCATCTCCTG
GACTTCACGGGATGGTGGTGAGTTCAAGCTGGTGGACGCAGAGGAGGTGGCCCGGCTGTGGGGGCTGCGCAAGAACAAGACCAACATGAATTATGACAAGCTCAGCCGGGCCTTGCGGTACTACTATG
ACAAGAATATCATCCGCAAAGTGAGTGGCCAGAAGTTTGTCTACAAGTTTGTGTCCTACCCCGAGGTTGCAAGGTGCTCCACAGAGGACTGCCTACCCCAGGCCGAGGTATCTGTAGCCTCTGCCGTG
GCAAATGTGGCCCCTGCTGCTGTACATGCTGCCCCCGGGGACACTGCCTCTGGAAAGCCAGGCACACCCAAGGGTGCAGGAATAGCAGGCCCAGGCGGTCTGGCACGCAGCAGCCGGAATGAGTACAT
GCGCTCCGGCCTCTACTCCACCTTCACCATCCAGTCCCTGCAGCCACAGCCACCCCCTCATCCTCGGCCAGCCTCGGTGCTTCCCAACACCACCCCTGCAGGAGCAGCAGCACCTCCCCCAGGGAGCA
GGAGCACCAGTCCAAACCCCTTGGAGGCTTGTCTGGATGCAGAAGAGGCTGGCCTGCCTCTGCAGGTCATCCTGACTCCGCCTGAGGCCCCAAACATGAAATCGGAAGAACTGAATGTGGAGCCAGGT
TTGGGCCGGTCACTGCCCCCAGAGGTGAAAGTGGAAGGGCCCAAGGAAGACTTGGGAGCTGCAGGGGAGGTGGGGTTTGTGCCAGAAGCTGCCAAGGCTGGTCCCGAAGTCCCTCCTGCAGAGGGCAT
GCCAGCCCGGATGCCCGCTGTTGTTATGGAAACTACAGCACAGGTGGGTGGCCTTGCGGCCTCCACCACTGAAATCACCCAGCCACAAAAAGGCCGGAAGCCCCGGGACCTGGAGCTTCCACTCAGCC
CAAGCCTGCTGGGTGGACCAGGACCCGAACGGACTCCAGGATCAGGAACTGGCTCTGGTGTGCAGGCACCAGGGCCAGCACTAACGCCATCCCTGCTACCTACGCATACGTTGACCCCGGTGCTGCTG
ACGCCCAGCTCGCTGCCCCCCAGCATTCACTTCTGGAGCACCCTGAGTCCTATCGCACCCCGAAGCCCAGCCAAGCTCTCCTTCCAGTTTCCGTCCAGTGGCAGCGCCCAGGTGCACATCCCTTCCAT
CAGCGTGGATGGCCTCTCGACCCCCGTGGTGCTCTCCCCAGGGCCCCAGAAGCCATGACTACCGCCACCACCAACCCTTTCTGGGGTCACTCCATCTGTGACCCTGAACTTCTCTCCAGCCAGCCATC
TCAAGGAGAAACATAGTTCACTGACAGACTCAAGCTCTGGTTGTGGTGGGGTGGGGAATTCCTGGGAAGAAGGATCTCTCACTAACTCCTTCACCGAAAACCTACAACTTCTGTCTTCTTCGTCAGTC
CCCCAGTGGCCGCCCTTACACGTCTCCTACTTCAGTGGTAGGGGCGGTTTATTTATTTATTTTTTGAAGGCCACTGGGAGGAGCCTGGCCCAACCCTTTTAGGGGGGTGGTTAAGACATCTCCCCCAT
CTCCCCCATCTCCCTACTTTTTTCCCTAAGACAAGACAATCGGGGTCTGGCTTGAGAAGGACCTTTCTTTATTTATTTCTCAGCCTGCCCTTGGGGAGATGAGGGAGCCCTGTCTCCATTTTGGGGTG
TGGGTAGAAGAGCTAGTTTGCTTTGTTTTATTATTCCTGGCCATCCCAAGGGTTCAGGAAGAATTTATCCGCTTTAATGGTTTAGGAGTCTTGACCAAGAAAGGATCACACCCTGGAAAGAGGAATTT
CCACCTCCCCAACCTTTCTCTCAGACAGCTTGTCCTTTACTCGACCAACATTGTGGCCAGGGAGGAACACCCTTTTGTTGTTCTCTCCCCTGAGAAGCCATTCCTTTGTCTGCCAAACTCCCTGGGGT
CCTGCCTGTTACCTCCCAATGGAGGGTTTTTTTCGGGGGTGGTCCCCGTCTGGGGGACCCCTCCAACCAGTACTCCAAGTTTCCCTGTCTTTCACCCCCTGCCATTTTGATAGTATAATCTATTTTTA
AATGGGGCTTTTCAATAGGGGAGAGGGAGGCATCTCTTCCTATATCTGATGGGGTGGGTGGGTGGGAAGGAAGGGATTTGGGGGTGATCTTCATGCTGCCCCCAAGTGTTTATTTTTGATACCAAACG
TATTTTCAGCTCCCTCCCTCCCAGCCCCCCAATTTCCTGCGGGCGGGTACAAAGGACCCTTTAAGTGTCCCTGGAGTTGGGAGGGAGGAACAGGGGACATAAAGCCTGTCTTGTCTCAATTCCAGGCT
GGAGAGGGTGGGTTCAAAAGACACCTGAGCTCATCTCCTCTCAGCACCAGCCCAACCCAGGCCTGGGGATCTGGAGGTTGGTGATTCGGGGACGGTGCTACACTCGTCTCCTCTGTTTGTTTTACTTC
CCCAAAATGGACCTTTTTTTCTAAGAGTCCCAGAGAATGGGGAATTGTTCCTGTAAATATATATTTTTAAAGGTG

hide sequence

RefSeq Acc Id:

XM_013358019 ⟹ XP_013213473

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	X	33,561,981 - 33,573,379 (-)	NCBI
SpeTri2.0	NW_004936502	13,402,732 - 13,414,307 (-)	NCBI

Sequence:

show sequence

TTTAACTCTGAGTAAAATATCCCCATTTTATAGATGAGCAACCAGGTACAGAGAGGCTGAGTGCTTGCTCAAAGCCACACGGACAGAACAGGGCAGAGGAACATGAGACTGTTCTCCAAAGAGGAGAT
TTGCAAGAGTAGCCAGGTTATTTGATGTATTGGTTCATTTAGAAGAATGAATTCTGCCTGGTAGGTCCTGGAACATGATGATTGTGTCATGAAGAGTTCATCAGTGGAAGGAATGGCTCCCCTGGCAG
GGAGAACAGCATGAATGTATTTTCAGAGGTACCTCTGGGATGGCGTGAGCGCTTCCCCAGCGATGGACCCATCTGTGACGCTGTGGCAGTTTCTGCTGCAGCTTTTGAGAGAGCAAGGCAATGGCCAC
ATCATCTCCTGGACTTCACGGGATGGTGGTGAGTTCAAGCTGGTGGACGCAGAGGAGGTGGCCCGGCTGTGGGGGCTGCGCAAGAACAAGACCAACATGAATTATGACAAGCTCAGCCGGGCCTTGCG
GTACTACTATGACAAGAATATCATCCGCAAAGTGAGTGGCCAGAAGTTTGTCTACAAGTTTGTGTCCTACCCCGAGGTTGCAAGGTGCTCCACAGAGGACTGCCTACCCCAGGCCGAGGTATCTGTAG
CCTCTGCCGTGGCAAATGTGGCCCCTGCTGCTGTACATGCTGCCCCCGGGGACACTGCCTCTGGAAAGCCAGGCACACCCAAGGGTGCAGGAATAGCAGGCCCAGGCGGTCTGGCACGCAGCAGCCGG
AATGAGTACATGCGCTCCGGCCTCTACTCCACCTTCACCATCCAGTCCCTGCAGCCACAGCCACCCCCTCATCCTCGGCCAGCCTCGGTGCTTCCCAACACCACCCCTGCAGGAGCAGCAGCACCTCC
CCCAGGGAGCAGGAGCACCAGTCCAAACCCCTTGGAGGCTTGTCTGGATGCAGAAGAGGCTGGCCTGCCTCTGCAGGTCATCCTGACTCCGCCTGAGGCCCCAAACATGAAATCGGAAGAACTGAATG
TGGAGCCAGGTTTGGGCCGGTCACTGCCCCCAGAGGTGAAAGTGGAAGGGCCCAAGGAAGACTTGGGAGCTGCAGGGGAGGTGGGGTTTGTGCCAGAAGCTGCCAAGGCTGGTCCCGAAGTCCCTCCT
GCAGAGGGCATGCCAGCCCGGATGCCCGCTGTTGTTATGGAAACTACAGCACAGGTGGGTGGCCTTGCGGCCTCCACCACTGAAATCACCCAGCCACAAAAAGGCCGGAAGCCCCGGGACCTGGAGCT
TCCACTCAGCCCAAGCCTGCTGGGTGGACCAGGACCCGAACGGACTCCAGGATCAGGAACTGGCTCTGGTGTGCAGGCACCAGGGCCAGCACTAACGCCATCCCTGCTACCTACGCATACGTTGACCC
CGGTGCTGCTGACGCCCAGCTCGCTGCCCCCCAGCATTCACTTCTGGAGCACCCTGAGTCCTATCGCACCCCGAAGCCCAGCCAAGCTCTCCTTCCAGTTTCCGTCCAGTGGCAGCGCCCAGGTGCAC
ATCCCTTCCATCAGCGTGGATGGCCTCTCGACCCCCGTGGTGCTCTCCCCAGGGCCCCAGAAGCCATGACTACCGCCACCACCAACCCTTTCTGGGGTCACTCCATCTGTGACCCTGAACTTCTCTCC
AGCCAGCCATCTCAAGGAGAAACATAGTTCACTGACAGACTCAAGCTCTGGTTGTGGTGGGGTGGGGAATTCCTGGGAAGAAGGATCTCTCACTAACTCCTTCACCGAAAACCTACAACTTCTGTCTT
CTTCGTCAGTCCCCCAGTGGCCGCCCTTACACGTCTCCTACTTCAGTGGTAGGGGCGGTTTATTTATTTATTTTTTGAAGGCCACTGGGAGGAGCCTGGCCCAACCCTTTTAGGGGGGTGGTTAAGAC
ATCTCCCCCATCTCCCCCATCTCCCTACTTTTTTCCCTAAGACAAGACAATCGGGGTCTGGCTTGAGAAGGACCTTTCTTTATTTATTTCTCAGCCTGCCCTTGGGGAGATGAGGGAGCCCTGTCTCC
ATTTTGGGGTGTGGGTAGAAGAGCTAGTTTGCTTTGTTTTATTATTCCTGGCCATCCCAAGGGTTCAGGAAGAATTTATCCGCTTTAATGGTTTAGGAGTCTTGACCAAGAAAGGATCACACCCTGGA
AAGAGGAATTTCCACCTCCCCAACCTTTCTCTCAGACAGCTTGTCCTTTACTCGACCAACATTGTGGCCAGGGAGGAACACCCTTTTGTTGTTCTCTCCCCTGAGAAGCCATTCCTTTGTCTGCCAAA
CTCCCTGGGGTCCTGCCTGTTACCTCCCAATGGAGGGTTTTTTTCGGGGGTGGTCCCCGTCTGGGGGACCCCTCCAACCAGTACTCCAAGTTTCCCTGTCTTTCACCCCCTGCCATTTTGATAGTATA
ATCTATTTTTAAATGGGGCTTTTCAATAGGGGAGAGGGAGGCATCTCTTCCTATATCTGATGGGGTGGGTGGGTGGGAAGGAAGGGATTTGGGGGTGATCTTCATGCTGCCCCCAAGTGTTTATTTTT
GATACCAAACGTATTTTCAGCTCCCTCCCTCCCAGCCCCCCAATTTCCTGCGGGCGGGTACAAAGGACCCTTTAAGTGTCCCTGGAGTTGGGAGGGAGGAACAGGGGACATAAAGCCTGTCTTGTCTC
AATTCCAGGCTGGAGAGGGTGGGTTCAAAAGACACCTGAGCTCATCTCCTCTCAGCACCAGCCCAACCCAGGCCTGGGGATCTGGAGGTTGGTGATTCGGGGACGGTGCTACACTCGTCTCCTCTGTT
TGTTTTACTTCCCCAAAATGGACCTTTTTTTCTAAGAGTCCCAGAGAATGGGGAATTGTTCCTGTAAATATATATTTTTAAAGGTGTT

hide sequence

RefSeq Acc Id:

XM_021725593 ⟹ XP_021581268

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	X	33,561,981 - 33,573,637 (-)	NCBI
SpeTri2.0	NW_004936502	13,402,726 - 13,414,419 (-)	NCBI

Sequence:

show sequence

GATTTACATTTTTGAGTGTCTGCCATGTACCAGAAACATATTTTTAAGCCCTTCATGCATATTAACATTTAACCCGCATAAAAGCCCTTGAGGTAGATGATTTTTTTAAATATTTAACTCTGAGTAAA
ATATCCCCATTTTATAGATGAGCAACCAGGTACAGAGAGGCTGAGTGCTTGCTCAAAGCCACACGGACAGAACAGGGCAGAGGAACATGAGACTGTTCTCCAAAGAGGAGATTTGCAAGAGTAGCCAG
GTTATTTGATGTATTGGTTCATTTAGAAGAATGAATTCTGCCTGGTAGGTCCTGGAACATGATGATTGTGTCATGAAGAGTTCATCAGTGGAAGGAATGGCTCCCCTGGCAGGGAGAACAGCATGAAT
GTATTTTCAGAGGTACCTCTGGGATGGCGTGAGCGCTTCCCCAGCGATGGACCCATCTGTGACGCTGTGGCAGTTTCTGCTGCAGCTTTTGAGAGAGCAAGGCAATGGCCACATCATCTCCTGGACTT
CACGGGATGGTGGTGAGTTCAAGCTGGTGGACGCAGAGGAGGTGGCCCGGCTGTGGGGGCTGCGCAAGAACAAGACCAACATGAATTATGACAAGCTCAGCCGGGCCTTGCGGTACTACTATGACAAG
AATATCATCCGCAAAGTGAGTGGCCAGAAGTTTGTCTACAAGTTTGTGTCCTACCCCGAGGTTGCAAGGTGCTCCACAGAGGACTGCCTACCCCAGGCCGAGGTATCTGTAGCCTCTGCCGTGGCAAA
TGTGGCCCCTGCTGCTGTACATGCTGCCCCCGGGGACACTGCCTCTGGAAAGCCAGGCACACCCAAGGGTGCAGGAATAGCAGGCCCAGGCGGTCTGGCACGCAGCAGCCGGAATGAGTACATGCGCT
CCGGCCTCTACTCCACCTTCACCATCCAGTCCCTGCAGCCACAGCCACCCCCTCATCCTCGGCCAGCCTCGGTGCTTCCCAACACCACCCCTGCAGGAGCAGCAGCACCTCCCCCAGGGAGCAGGAGC
ACCAGTCCAAACCCCTTGGAGGCTTGTCTGGATGCAGAAGAGGCTGGCCTGCCTCTGCAGACCCCGGTGCTGCTGACGCCCAGCTCGCTGCCCCCCAGCATTCACTTCTGGAGCACCCTGAGTCCTAT
CGCACCCCGAAGCCCAGCCAAGCTCTCCTTCCAGTTTCCGTCCAGTGGCAGCGCCCAGGTGCACATCCCTTCCATCAGCGTGGATGGCCTCTCGACCCCCGTGGTGCTCTCCCCAGGGCCCCAGAAGC
CATGACTACCGCCACCACCAACCCTTTCTGGGGTCACTCCATCTGTGACCCTGAACTTCTCTCCAGCCAGCCATCTCAAGGAGAAACATAGTTCACTGACAGACTCAAGCTCTGGTTGTGGTGGGGTG
GGGAATTCCTGGGAAGAAGGATCTCTCACTAACTCCTTCACCGAAAACCTACAACTTCTGTCTTCTTCGTCAGTCCCCCAGTGGCCGCCCTTACACGTCTCCTACTTCAGTGGTAGGGGCGGTTTATT
TATTTATTTTTTGAAGGCCACTGGGAGGAGCCTGGCCCAACCCTTTTAGGGGGGTGGTTAAGACATCTCCCCCATCTCCCCCATCTCCCTACTTTTTTCCCTAAGACAAGACAATCGGGGTCTGGCTT
GAGAAGGACCTTTCTTTATTTATTTCTCAGCCTGCCCTTGGGGAGATGAGGGAGCCCTGTCTCCATTTTGGGGTGTGGGTAGAAGAGCTAGTTTGCTTTGTTTTATTATTCCTGGCCATCCCAAGGGT
TCAGGAAGAATTTATCCGCTTTAATGGTTTAGGAGTCTTGACCAAGAAAGGATCACACCCTGGAAAGAGGAATTTCCACCTCCCCAACCTTTCTCTCAGACAGCTTGTCCTTTACTCGACCAACATTG
TGGCCAGGGAGGAACACCCTTTTGTTGTTCTCTCCCCTGAGAAGCCATTCCTTTGTCTGCCAAACTCCCTGGGGTCCTGCCTGTTACCTCCCAATGGAGGGTTTTTTTCGGGGGTGGTCCCCGTCTGG
GGGACCCCTCCAACCAGTACTCCAAGTTTCCCTGTCTTTCACCCCCTGCCATTTTGATAGTATAATCTATTTTTAAATGGGGCTTTTCAATAGGGGAGAGGGAGGCATCTCTTCCTATATCTGATGGG
GTGGGTGGGTGGGAAGGAAGGGATTTGGGGGTGATCTTCATGCTGCCCCCAAGTGTTTATTTTTGATACCAAACGTATTTTCAGCTCCCTCCCTCCCAGCCCCCCAATTTCCTGCGGGCGGGTACAAA
GGACCCTTTAAGTGTCCCTGGAGTTGGGAGGGAGGAACAGGGGACATAAAGCCTGTCTTGTCTCAATTCCAGGCTGGAGAGGGTGGGTTCAAAAGACACCTGAGCTCATCTCCTCTCAGCACCAGCCC
AACCCAGGCCTGGGGATCTGGAGGTTGGTGATTCGGGGACGGTGCTACACTCGTCTCCTCTGTTTGTTTTACTTCCCCAAAATGGACCTTTTTTTCTAAGAGTCCCAGAGAATGGGGAATTGTTCCTG
TAAATATATATTTTTAAAGGTGTTGCTGGA

hide sequence

RefSeq Acc Id:

XM_040279106 ⟹ XP_040135040

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	X	33,561,981 - 33,571,673 (-)	NCBI


Protein RefSeqs	XP_005324085	(Get FASTA)	NCBI Sequence Viewer
	XP_013213473	(Get FASTA)	NCBI Sequence Viewer
	XP_021581268	(Get FASTA)	NCBI Sequence Viewer
	XP_040135040	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000008908.2
GenBank Protein	KAG3272029	(Get FASTA)	NCBI Sequence Viewer
	KAG3272030	(Get FASTA)	NCBI Sequence Viewer
	KAG3272031	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

XP_013213473 ⟸ XM_013358019

- Peptide Label:

isoform X1

- Sequence:

show sequence

MYFQRYLWDGVSASPAMDPSVTLWQFLLQLLREQGNGHIISWTSRDGGEFKLVDAEEVARLWGLRKNKTNMNYDKLSRALRYYYDKNIIRKVSGQKFVYKFVSYPEVARCSTEDCLPQAEVSVASAVA
NVAPAAVHAAPGDTASGKPGTPKGAGIAGPGGLARSSRNEYMRSGLYSTFTIQSLQPQPPPHPRPASVLPNTTPAGAAAPPPGSRSTSPNPLEACLDAEEAGLPLQVILTPPEAPNMKSEELNVEPGL
GRSLPPEVKVEGPKEDLGAAGEVGFVPEAAKAGPEVPPAEGMPARMPAVVMETTAQVGGLAASTTEITQPQKGRKPRDLELPLSPSLLGGPGPERTPGSGTGSGVQAPGPALTPSLLPTHTLTPVLLT
PSSLPPSIHFWSTLSPIAPRSPAKLSFQFPSSGSAQVHIPSISVDGLSTPVVLSPGPQKP

hide sequence

RefSeq Acc Id:	XP_005324085 ⟸ XM_005324028
- Peptide Label:	isoform X2
- UniProtKB:	I3MEI5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDPSVTLWQFLLQLLREQGNGHIISWTSRDGGEFKLVDAEEVARLWGLRKNKTNMNYDKLSRAL RYYYDKNIIRKVSGQKFVYKFVSYPEVARCSTEDCLPQAEVSVASAVANVAPAAVHAAPGDTASGKPGTPKGAGIAGPGGLARSSRNEYMRSGLYSTFTIQSLQPQPPPHPRPASVLPNTTPAGAAAP PPGSRSTSPNPLEACLDAEEAGLPLQVILTPPEAPNMKSEELNVEPGLGRSLPPEVKVEGPKEDLGAAGEVGFVPEAAKAGPEVPPAEGMPARMPAVVMETTAQVGGLAASTTEITQPQKGRKPRDLE LPLSPSLLGGPGPERTPGSGTGSGVQAPGPALTPSLLPTHTLTPVLLTPSSLPPSIHFWSTLSPIAPRSPAKLSFQFPSSGSAQVHIPSISVDGLSTPVVLSPGPQKP hide sequence

RefSeq Acc Id:

XP_021581268 ⟸ XM_021725593

- Peptide Label:

isoform X3

- Sequence:

show sequence

MYFQRYLWDGVSASPAMDPSVTLWQFLLQLLREQGNGHIISWTSRDGGEFKLVDAEEVARLWGLRKNKTNMNYDKLSRALRYYYDKNIIRKVSGQKFVYKFVSYPEVARCSTEDCLPQAEVSVASAVA
NVAPAAVHAAPGDTASGKPGTPKGAGIAGPGGLARSSRNEYMRSGLYSTFTIQSLQPQPPPHPRPASVLPNTTPAGAAAPPPGSRSTSPNPLEACLDAEEAGLPLQTPVLLTPSSLPPSIHFWSTLSP
IAPRSPAKLSFQFPSSGSAQVHIPSISVDGLSTPVVLSPGPQKP

hide sequence

RefSeq Acc Id:	XP_040135040 ⟸ XM_040279106
- Peptide Label:	isoform X2
- UniProtKB:	I3MEI5 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSSTOP00000008908 ⟸ ENSSTOT00000009930

Protein Domains

ETS

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000009932	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000009930.3	UniProtKB/TrEMBL
Gene3D-CATH	1.10.10.10	UniProtKB/TrEMBL
InterPro	Ets_dom	UniProtKB/TrEMBL
	ETS_fam	UniProtKB/TrEMBL
	WH-like_DNA-bd_sf	UniProtKB/TrEMBL
	WH_DNA-bd_sf	UniProtKB/TrEMBL
NCBI Gene	Elk1	ENTREZGENE
PANTHER	ETS DOMAIN-CONTAINING PROTEIN ELK-1	UniProtKB/TrEMBL
	PTHR11849	UniProtKB/TrEMBL
Pfam	Ets	UniProtKB/TrEMBL
PRINTS	ETSDOMAIN	UniProtKB/TrEMBL
PROSITE	ETS_DOMAIN_1	UniProtKB/TrEMBL
	ETS_DOMAIN_2	UniProtKB/TrEMBL
	ETS_DOMAIN_3	UniProtKB/TrEMBL
SMART	ETS	UniProtKB/TrEMBL
Superfamily-SCOP	SSF46785	UniProtKB/TrEMBL
UniProt	I3MEI5	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2019-01-29	Elk1	ETS transcription factor ELK1		ELK1, ETS transcription factor	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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Imported Disease Annotations - ClinVar

Imported Annotations - SMPDB

Imported Annotations - PID (archival)