Symbol:
Slc15a4
Name:
solute carrier family 15 member 4
RGD ID:
12516345
Description:
ENCODES a protein that exhibits dipeptide transmembrane transporter activity (ortholog); L-histidine transmembrane transporter activity (ortholog); peptide:proton symporter activity (ortholog); INVOLVED IN dipeptide import across plasma membrane (ortholog); histidine transport (ortholog); L-histidine transmembrane export from vacuole (ortholog); ASSOCIATED WITH systemic lupus erythematosus (ortholog); FOUND IN early endosome membrane (ortholog); endolysosome membrane (ortholog); endosome membrane (ortholog)
Type:
protein-coding
RefSeq Status:
MODEL
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
SpeTri2.0 - Squirrel SpeTri2.0 Assembly
NCBI Annotation Information:
Annotation category: partial on reference assembly
Position:
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Slc15a4
SLC15A4 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 12 128,793,194 - 128,823,958 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 12 128,793,194 - 128,823,958 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 12 129,277,739 - 129,308,503 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 12 127,843,713 - 127,874,494 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 12 127,802,644 - 127,833,421 NCBI Celera 12 128,891,861 - 128,922,740 (-) NCBI Celera Cytogenetic Map 12 q24.33 NCBI HuRef 12 126,263,573 - 126,285,425 (-) NCBI HuRef CHM1_1 12 129,098,609 - 129,129,417 (-) NCBI CHM1_1 T2T-CHM13v2.0 12 128,825,188 - 128,855,979 (-) NCBI T2T-CHM13v2.0
Slc15a4 Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 5 127,668,795 - 127,710,356 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 5 127,672,728 - 127,709,961 (-) Ensembl GRCm39 Ensembl GRCm38 5 127,594,545 - 127,633,292 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 5 127,595,664 - 127,632,897 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 5 128,076,036 - 128,097,762 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 5 127,884,869 - 127,906,595 (-) NCBI MGSCv36 mm8 Celera 5 124,625,149 - 124,646,865 (-) NCBI Celera Cytogenetic Map 5 G1.2 NCBI cM Map 5 66.0 NCBI
Slc15a4 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 12 34,684,583 - 34,718,429 (+) NCBI GRCr8 mRatBN7.2 12 29,048,634 - 29,082,480 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 12 29,063,015 - 29,082,480 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 12 30,198,626 - 30,218,177 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 12 30,810,079 - 30,829,630 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 12 29,869,246 - 29,888,797 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 12 32,753,824 - 32,773,277 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 12 32,753,824 - 32,773,277 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 12 34,660,965 - 34,680,418 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 12 30,111,863 - 30,131,134 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 12 29,975,250 - 29,994,522 (+) NCBI Celera 12 30,749,254 - 30,768,706 (+) NCBI Celera Cytogenetic Map 12 q14 NCBI
Slc15a4 Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 NW_004955482 2,327,137 - 2,343,980 (+) NCBI ChiLan1.0 ChiLan1.0
SLC15A4 Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 10 136,865,833 - 136,896,753 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 12 136,862,353 - 136,893,242 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 12 126,418,071 - 126,448,917 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 12 130,639,525 - 130,669,822 (-) NCBI panpan1.1 PanPan1.1 panPan2
SLC15A4 Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 26 2,803,798 - 2,832,057 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 26 2,802,724 - 2,831,530 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 26 3,006,941 - 3,035,199 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 26 3,056,487 - 3,084,750 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 26 3,056,499 - 3,084,223 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 26 2,988,152 - 3,015,703 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 26 3,086,221 - 3,113,814 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 26 2,996,157 - 3,024,420 (+) NCBI UU_Cfam_GSD_1.0
SLC15A4 Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 14 26,122,386 - 26,154,781 (+) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 14 26,122,362 - 26,154,414 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 14 27,770,845 - 27,803,186 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
SLC15A4 Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 11 124,170,785 - 124,204,358 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 11 124,169,732 - 124,204,200 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666037 121,090,609 - 121,123,572 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Slc15a4
.
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
RefSeq Acc Id:
XM_040290926 ⟹ XP_040146860
Type:
CODING
Position:
Squirrel Assembly Chr Position (strand) Source HiC_Itri_2 NW_024405118 124,227,513 - 124,239,308 (+) NCBI
RefSeq Acc Id:
XP_040146860 ⟸ XM_040290926
