Symbol:
TNFRSF14
Name:
TNF receptor superfamily member 14
RGD ID:
12305980
Description:
ENCODES a protein that exhibits cytokine binding (ortholog); receptor ligand activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN CD4-positive, alpha-beta T cell proliferation (ortholog); defense response to Gram-negative bacterium (ortholog); defense response to Gram-positive bacterium (ortholog); ASSOCIATED WITH arteriosclerosis (ortholog); Brain Injuries (ortholog); celiac disease (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog)
Type:
protein-coding
RefSeq Status:
PROVISIONAL
Previously known as:
HVEM; tumor necrosis factor receptor superfamily member 14; tumor necrosis factor receptor superfamily, member 14 (herpesvirus entry mediator)
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 5 57,386,190 - 57,416,864 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 5 57,411,529 - 57,416,512 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 5 57,425,462 - 57,430,262 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 5 57,611,566 - 57,621,030 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 5 57,614,515 - 57,621,010 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 5 57,607,109 - 57,611,909 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 5 57,499,417 - 57,504,217 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 5 57,889,145 - 57,893,945 (+) NCBI UU_Cfam_GSD_1.0
JBrowse:
View Region in Genome Browser (JBrowse)
Model
TNFRSF14 Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 5 57,386,190 - 57,416,864 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 5 57,411,529 - 57,416,512 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 5 57,425,462 - 57,430,262 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 5 57,611,566 - 57,621,030 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 5 57,614,515 - 57,621,010 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 5 57,607,109 - 57,611,909 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 5 57,499,417 - 57,504,217 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 5 57,889,145 - 57,893,945 (+) NCBI UU_Cfam_GSD_1.0
TNFRSF14 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 1 2,554,234 - 2,563,829 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 1 2,555,639 - 2,565,382 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 1 2,487,810 - 2,495,268 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 1 2,479,150 - 2,486,613 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 1 2,521,454 - 2,528,915 NCBI Celera 1 90,732 - 98,195 (-) NCBI Celera Cytogenetic Map 1 p36.32 NCBI HuRef 1 1,767,040 - 1,774,503 (+) NCBI HuRef CHM1_1 1 2,474,873 - 2,482,336 (+) NCBI CHM1_1 T2T-CHM13v2.0 1 1,997,007 - 2,005,473 (+) NCBI T2T-CHM13v2.0
Tnfrsf14 Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 4 155,002,944 - 155,013,077 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 4 155,006,390 - 155,013,020 (-) Ensembl GRCm39 Ensembl GRCm38 4 154,918,487 - 154,928,620 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 4 154,921,933 - 154,928,563 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 4 154,296,319 - 154,302,186 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 4 153,766,010 - 153,771,877 (-) NCBI MGSCv36 mm8 Celera 4 157,193,781 - 157,199,645 (-) NCBI Celera Cytogenetic Map 4 E2 NCBI cM Map 4 85.81 NCBI
Tnfrsf14 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 5 170,768,413 - 170,776,749 (-) NCBI GRCr8 mRatBN7.2 5 165,486,069 - 165,494,421 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 5 165,484,262 - 165,493,703 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 5 168,191,197 - 168,198,892 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 5 170,012,607 - 170,020,302 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 5 169,975,147 - 169,982,843 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 5 172,328,259 - 172,337,221 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 5 172,328,262 - 172,335,892 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 5 175,784,222 - 175,792,597 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 5 171,727,707 - 171,735,340 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 5 171,738,202 - 171,745,835 (-) NCBI Celera 5 163,692,588 - 163,700,221 (-) NCBI Celera Cytogenetic Map 5 q36 NCBI
Tnfrsf14 Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 NW_004955486 8,670,182 - 8,684,677 (-) NCBI ChiLan1.0 ChiLan1.0
TNFRSF14 Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 1 225,684,004 - 225,692,010 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 1 224,344,543 - 224,352,496 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 1 1,288,493 - 1,296,532 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 1 2,427,421 - 2,435,615 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 1 2,427,631 - 2,435,615 (+) Ensembl panpan1.1 panPan2
Tnfrsf14
TNFRSF14 Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 20 128,992,572 - 128,999,829 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 20 128,992,489 - 129,000,338 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666054 33,335,588 - 33,343,167 (-) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Tnfrsf14
.
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
6
5
5
23
22
16
6
6
6
6
33
22
12
14
10
Too many to show, limit is 500. Download them if you would like to view them all.
Ensembl Acc Id:
ENSCAFT00000030875 ⟹ ENSCAFP00000028709
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source CanFam3.1 Ensembl 5 57,411,529 - 57,416,512 (+) Ensembl
Ensembl Acc Id:
ENSCAFT00000043591 ⟹ ENSCAFP00000039934
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source CanFam3.1 Ensembl 5 57,412,320 - 57,416,113 (+) Ensembl
Ensembl Acc Id:
ENSCAFT00845032663 ⟹ ENSCAFP00845025548
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source ROS_Cfam_1.0 Ensembl 5 57,614,515 - 57,621,010 (+) Ensembl
RefSeq Acc Id:
NM_001284454 ⟹ NP_001271383
RefSeq Status:
PROVISIONAL
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source CanFam3.1 5 57,411,595 - 57,416,395 (+) NCBI Dog10K_Boxer_Tasha 5 57,425,462 - 57,430,262 (+) NCBI ROS_Cfam_1.0 5 57,615,766 - 57,620,566 (+) NCBI UMICH_Zoey_3.1 5 57,607,109 - 57,611,909 (+) NCBI UNSW_CanFamBas_1.0 5 57,499,417 - 57,504,217 (+) NCBI UU_Cfam_GSD_1.0 5 57,889,145 - 57,893,945 (+) NCBI
Sequence:
ATGGGGCCTCTTCGAGGCTGGGAGCTGCCCCCCTGGAGCCAGGCCCCCAAGGCTGATGCCCTGAGCCAGGCCCTGTACCTCCTCCTCCTGGGGTCCCTCCCCTGGGCTCTGGCCACGGCCCCTTGCAA
hide sequence
RefSeq Acc Id:
XM_038664116 ⟹ XP_038520044
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source ROS_Cfam_1.0 5 57,614,062 - 57,621,030 (+) NCBI
RefSeq Acc Id:
XM_038664117 ⟹ XP_038520045
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source ROS_Cfam_1.0 5 57,611,566 - 57,621,030 (+) NCBI
RefSeq Acc Id:
XM_038664118 ⟹ XP_038520046
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source ROS_Cfam_1.0 5 57,613,867 - 57,621,030 (+) NCBI
RefSeq Acc Id:
XM_038664119 ⟹ XP_038520047
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source ROS_Cfam_1.0 5 57,613,867 - 57,621,030 (+) NCBI
RefSeq Acc Id:
NP_001271383 ⟸ NM_001284454
- Peptide Label:
precursor
- UniProtKB:
A0A8C0RYX0 (UniProtKB/TrEMBL), E2QXY8 (UniProtKB/TrEMBL), A0A8C0KBI4 (UniProtKB/TrEMBL)
- Sequence:
MGPLRGWELPPWSQAPKADALSQALYLLLLGSLPWALATAPCKEEEYPVGSECCPKCSPGYRVKEACGELTGTVCAPCDPGTYTAHLNGLSECLQCRMCDPAMALVTRQKCSRTENTVCACAQGHFCI
hide sequence
Ensembl Acc Id:
ENSCAFP00000028709 ⟸ ENSCAFT00000030875
Ensembl Acc Id:
ENSCAFP00000039934 ⟸ ENSCAFT00000043591
RefSeq Acc Id:
XP_038520045 ⟸ XM_038664117
- Peptide Label:
isoform X1
- UniProtKB:
A0A8C0RYX0 (UniProtKB/TrEMBL), E2QXY8 (UniProtKB/TrEMBL), A0A8C0KBI4 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_038520046 ⟸ XM_038664118
- Peptide Label:
isoform X2
RefSeq Acc Id:
XP_038520047 ⟸ XM_038664119
- Peptide Label:
isoform X3
RefSeq Acc Id:
XP_038520044 ⟸ XM_038664116
- Peptide Label:
isoform X1
- UniProtKB:
A0A8C0RYX0 (UniProtKB/TrEMBL), E2QXY8 (UniProtKB/TrEMBL), A0A8C0KBI4 (UniProtKB/TrEMBL)
Ensembl Acc Id:
ENSCAFP00845025548 ⟸ ENSCAFT00845032663
RGD ID: 13683358 Promoter ID: EPDNEW_C1426 Type: initiation region Name: TNFRSF14_1 Description: TNF receptor superfamily member 14 SO ACC ID: SO:0000170 Source: EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/ ) Experiment Methods: Single-end sequencing. Position: Dog Assembly Chr Position (strand) Source CanFam3.1 5 57,411,521 - 57,411,581 EPDNEW
