PLAUR (plasminogen activator, urokinase receptor) - Rat Genome Database

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Pathways
Gene: PLAUR (plasminogen activator, urokinase receptor) Canis lupus familiaris
Analyze
Symbol: PLAUR
Name: plasminogen activator, urokinase receptor
RGD ID: 12301312
Description: ENCODES a protein that exhibits cell-matrix adhesion mediator activity (ortholog); enzyme activator activity (ortholog); enzyme binding (ortholog); INVOLVED IN cell-matrix adhesion (ortholog); epithelial cell differentiation involved in prostate gland development (ortholog); mesenchymal cell differentiation (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol-associated liver disease (ortholog); autistic disorder (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog); protein complex involved in cell-matrix adhesion (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: urokinase plasminogen activator surface receptor
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11111,476,804 - 111,490,876 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1111,476,893 - 111,490,880 (+)EnsemblCanFam3.1 EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1110,957,047 - 110,970,796 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01112,087,347 - 112,101,189 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
UMICH_Zoey_3.11111,675,381 - 111,689,348 (+)NCBIUMICH_Zoey_3.1
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:26286429  


Genomics

Comparative Map Data
PLAUR
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11111,476,804 - 111,490,876 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1111,476,893 - 111,490,880 (+)EnsemblCanFam3.1 EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1110,957,047 - 110,970,796 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01112,087,347 - 112,101,189 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
UMICH_Zoey_3.11111,675,381 - 111,689,348 (+)NCBIUMICH_Zoey_3.1
PLAUR
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381943,646,095 - 43,670,169 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1943,645,672 - 43,670,547 (-)EnsemblGRCh38.p14 Ensemblhg38GRCh38
GRCh371944,150,247 - 44,174,321 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361948,842,088 - 48,866,342 (-)NCBIBuild 36Build 36hg18NCBI36
Build 341948,844,571 - 48,866,342NCBI
Celera1940,952,740 - 40,977,471 (-)NCBICelera
Cytogenetic Map19q13.31NCBI
HuRef1940,580,832 - 40,605,572 (-)NCBIHuRef
CHM1_11944,151,900 - 44,176,634 (-)NCBICHM1_1
T2T-CHM13v2.01946,467,757 - 46,492,325 (-)NCBIT2T-CHM13v2.0
Plaur
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39724,161,857 - 24,175,393 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl724,161,875 - 24,175,394 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm38724,460,937 - 24,475,970 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl724,462,484 - 24,475,968 (+)EnsemblGRCm38.p6 Ensemblmm10GRCm38
MGSCv37725,247,519 - 25,260,892 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36724,171,260 - 24,184,634 (+)NCBIMGSCv36mm8
Celera719,076,593 - 19,089,968 (+)NCBICelera
Cytogenetic Map7A3NCBI
cM Map710.92NCBI
Plaur
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8189,181,363 - 89,196,308 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl189,178,453 - 89,198,130 (+)EnsemblGRCr8
mRatBN7.2180,053,440 - 80,068,384 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl180,050,324 - 80,068,595 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx185,446,800 - 85,461,972 (+)NCBIUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0193,996,901 - 94,011,843 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0187,202,621 - 87,217,793 (+)NCBIUTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd187,801,232 - 87,816,175 (+)NCBI
Lyon_Normotensive192,938,222 - 92,953,165 (+)NCBI
Lyon_Hypertensive189,482,090 - 89,497,260 (+)NCBI
F344_StmMcwi187,926,812 - 87,941,755 (+)NCBI
Rnor_6.0181,328,171 - 81,344,954 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl181,328,183 - 81,344,708 (+)EnsemblRnor_6.0 Ensemblrn6Rnor6.0
Rnor_5.0182,587,242 - 82,602,924 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4179,708,646 - 79,712,881 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera174,507,638 - 74,521,525 (+)NCBICelera
RGSC_v3.1179,786,756 - 79,791,047 (+)NCBI
Cytogenetic Map1q21NCBI
Plaur
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555551,378,793 - 1,393,324 (-)EnsemblChiLan1.0 Ensembl
ChiLan1.0NW_0049555551,378,505 - 1,393,395 (-)NCBIChiLan1.0ChiLan1.0
Plaur
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mIctTri1.hap11511,597,977 - 11,612,756 (+)NCBImIctTri1.hap1
HiC_Itri_2NW_02440934916,493,551 - 16,503,390 (-)NCBIHiC_Itri_2
SpeTri2.0NW_004936706840,968 - 855,552 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PLAUR
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl650,489,777 - 50,505,418 (-)EnsemblSscrofa11.1 EnsemblsusScr11Sscrofa11.1
Sscrofa11.1650,489,773 - 50,505,453 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2646,349,485 - 46,365,098 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PLAUR
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mChlSab1.0.hap1614,182,416 - 14,205,367 (+)NCBImChlSab1.0.hap1
Vero_WHO_p1.0NW_02366607316,711,568 - 16,734,916 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
ChlSab1.1637,161,957 - 37,191,867 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Plaur
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046249071,174,648 - 1,188,919 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
HetGla_female_1.0 EnsemblNW_0046249071,174,448 - 1,189,377 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
Naked mole-rat maternal Ensembl294,671,352 - 4,690,126 (+)Ensembl
Plaur
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v12170,237,074 - 170,252,694 (-)NCBIRrattus_CSIRO_v1Rrattus_CSIRO_v1

Variants

.
Variants in PLAUR
206 total Variants

Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 22 16 6 6 6 6 33 22 12 14 10

Sequence


Ensembl Acc Id: ENSCAFT00000007613   ⟹   ENSCAFP00000007049
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1111,476,893 - 111,490,880 (+)Ensembl
RefSeq Acc Id: XM_014119989   ⟹   XP_013975464
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11111,476,804 - 111,490,876 (+)NCBI
Dog10K_Boxer_Tasha1110,957,047 - 110,970,796 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038467960   ⟹   XP_038323888
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11111,675,381 - 111,689,348 (+)NCBI
RefSeq Acc Id: XM_038656777   ⟹   XP_038512705
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01112,087,347 - 112,101,189 (+)NCBI
Protein Sequences
Protein RefSeqs XP_013975464 (Get FASTA)   NCBI Sequence Viewer  
  XP_038323888 (Get FASTA)   NCBI Sequence Viewer  
  XP_038512705 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_013975464   ⟸   XM_014119989
- Peptide Label: isoform X1
- Sequence:
Ensembl Acc Id: ENSCAFP00000007049   ⟸   ENSCAFT00000007613
RefSeq Acc Id: XP_038323888   ⟸   XM_038467960
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038512705   ⟸   XM_038656777
- Peptide Label: isoform X1


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000004730 Ensembl
NCBI Gene PLAUR ENTREZGENE
VGNC ID VGNC:56920 ENTREZGENE