PLAUR (Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
CanFam3.1 | 1 | 111,476,804 - 111,490,876 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 1 | 111,476,893 - 111,490,880 (+) | Ensembl | | CanFam3.1 Ensembl | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 1 | 110,957,047 - 110,970,796 (+) | NCBI | Dog10K_Boxer_Tasha | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 1 | 112,087,347 - 112,101,189 (+) | NCBI | ROS_Cfam_1.0 | ROS_Cfam_1.0 | | | UMICH_Zoey_3.1 | 1 | 111,675,381 - 111,689,348 (+) | NCBI | | UMICH_Zoey_3.1 | | |
|
PLAUR (Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCh38 | 19 | 43,646,095 - 43,670,169 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 19 | 43,645,672 - 43,670,547 (-) | Ensembl | | GRCh38.p14 Ensembl | hg38 | GRCh38 | GRCh37 | 19 | 44,150,247 - 44,174,321 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 19 | 48,842,088 - 48,866,342 (-) | NCBI | Build 36 | Build 36 | hg18 | NCBI36 | Build 34 | 19 | 48,844,571 - 48,866,342 | NCBI | | | | | Celera | 19 | 40,952,740 - 40,977,471 (-) | NCBI | | Celera | | | Cytogenetic Map | 19 | q13.31 | NCBI | | | | | HuRef | 19 | 40,580,832 - 40,605,572 (-) | NCBI | | HuRef | | | CHM1_1 | 19 | 44,151,900 - 44,176,634 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 19 | 46,467,757 - 46,492,325 (-) | NCBI | | T2T-CHM13v2.0 | | |
|
Plaur (Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCm39 | 7 | 24,161,857 - 24,175,393 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 7 | 24,161,875 - 24,175,394 (+) | Ensembl | | GRCm39 Ensembl | | GRCm39 | GRCm38 | 7 | 24,460,937 - 24,475,970 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 7 | 24,462,484 - 24,475,968 (+) | Ensembl | | GRCm38.p6 Ensembl | mm10 | GRCm38 | MGSCv37 | 7 | 25,247,519 - 25,260,892 (+) | NCBI | MGSCv37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 7 | 24,171,260 - 24,184,634 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 7 | 19,076,593 - 19,089,968 (+) | NCBI | | Celera | | | Cytogenetic Map | 7 | A3 | NCBI | | | | | cM Map | 7 | 10.92 | NCBI | | | | |
|
Plaur (Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCr8 | 1 | 89,181,363 - 89,196,308 (+) | NCBI | GRCr8 | GRCr8 | | GRCr8 | GRCr8 Ensembl | 1 | 89,178,453 - 89,198,130 (+) | Ensembl | | | | GRCr8 | mRatBN7.2 | 1 | 80,053,440 - 80,068,384 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 1 | 80,050,324 - 80,068,595 (+) | Ensembl | | | | mRatBN7.2 | UTH_Rnor_SHR_Utx | 1 | 85,446,800 - 85,461,972 (+) | NCBI | UTH_Rnor_SHR_Utx | | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 1 | 93,996,901 - 94,011,843 (+) | NCBI | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | | UTH_Rnor_WKY_Bbb_1.0 | 1 | 87,202,621 - 87,217,793 (+) | NCBI | UTH_Rnor_WKY_Bbb_1.0 | | | | Dahl_SR_JrHsd | 1 | 87,801,232 - 87,816,175 (+) | NCBI | | | | | Lyon_Normotensive | 1 | 92,938,222 - 92,953,165 (+) | NCBI | | | | | Lyon_Hypertensive | 1 | 89,482,090 - 89,497,260 (+) | NCBI | | | | | F344_StmMcwi | 1 | 87,926,812 - 87,941,755 (+) | NCBI | | | | | Rnor_6.0 | 1 | 81,328,171 - 81,344,954 (+) | NCBI | Rnor_6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 1 | 81,328,183 - 81,344,708 (+) | Ensembl | | Rnor_6.0 Ensembl | rn6 | Rnor6.0 | Rnor_5.0 | 1 | 82,587,242 - 82,602,924 (+) | NCBI | Rnor_5.0 | Rnor_5.0 | rn5 | | RGSC_v3.4 | 1 | 79,708,646 - 79,712,881 (+) | NCBI | RGSC_v3.4 | RGSC_v3.4 | rn4 | | Celera | 1 | 74,507,638 - 74,521,525 (+) | NCBI | | Celera | | | RGSC_v3.1 | 1 | 79,786,756 - 79,791,047 (+) | NCBI | | | | | Cytogenetic Map | 1 | q21 | NCBI | | | | |
|
Plaur (Chinchilla lanigera - long-tailed chinchilla) |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChiLan1.0 Ensembl | NW_004955555 | 1,378,793 - 1,393,324 (-) | Ensembl | | ChiLan1.0 Ensembl | | | ChiLan1.0 | NW_004955555 | 1,378,505 - 1,393,395 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
Plaur (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
| Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
mIctTri1.hap1 | 15 | 11,597,977 - 11,612,756 (+) | NCBI | | mIctTri1.hap1 | | | HiC_Itri_2 | NW_024409349 | 16,493,551 - 16,503,390 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 | NW_004936706 | 840,968 - 855,552 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
PLAUR (Sus scrofa - pig) |
| Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
Sscrofa11.1 Ensembl | 6 | 50,489,777 - 50,505,418 (-) | Ensembl | | Sscrofa11.1 Ensembl | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 6 | 50,489,773 - 50,505,453 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 6 | 46,349,485 - 46,365,098 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
PLAUR (Chlorocebus sabaeus - green monkey) |
| Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
mChlSab1.0.hap1 | 6 | 14,182,416 - 14,205,367 (+) | NCBI | | mChlSab1.0.hap1 | | | Vero_WHO_p1.0 | NW_023666073 | 16,711,568 - 16,734,916 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | | ChlSab1.1 | 6 | 37,161,957 - 37,191,867 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | |
|
Plaur (Heterocephalus glaber - naked mole-rat) |
| Naked Mole-Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
HetGla 1.0 | NW_004624907 | 1,174,648 - 1,188,919 (-) | NCBI | HetGla 1.0 | HetGla 1.0 | hetGla2 | | HetGla_female_1.0 Ensembl | NW_004624907 | 1,174,448 - 1,189,377 (-) | Ensembl | | HetGla_female_1.0 Ensembl | hetGla2 | HetGla_female_1.0 Ensembl | Naked mole-rat maternal Ensembl | 29 | 4,671,352 - 4,690,126 (+) | Ensembl | | | | |
|
Plaur (Rattus rattus - black rat) |
|