PLAUR (plasminogen activator, urokinase receptor) - Rat Genome Database

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Gene: PLAUR (plasminogen activator, urokinase receptor) Sus scrofa
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Symbol: PLAUR
Name: plasminogen activator, urokinase receptor
RGD ID: 13891432
Description: ENCODES a protein that exhibits enzyme binding (inferred); protein domain specific binding (inferred); signaling receptor binding (inferred); INVOLVED IN epithelial cell differentiation involved in prostate gland development (ortholog); mesenchymal cell differentiation (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH Alcoholic Liver Diseases (ortholog); autistic disorder (ortholog); Bacteremia (ortholog); FOUND IN cell surface (inferred); plasma membrane (inferred); protein complex involved in cell-matrix adhesion (inferred); INTERACTS WITH bis(2-chloroethyl) sulfide; deoxynivalenol; serpentine asbestos
Type: protein-coding
RefSeq Status: MODEL
Previously known as: urokinase plasminogen activator surface receptor
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl650,489,777 - 50,505,418 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1650,489,773 - 50,505,453 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2646,349,485 - 46,365,098 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
PLAUR
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl650,489,777 - 50,505,418 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1650,489,773 - 50,505,453 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2646,349,485 - 46,365,098 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PLAUR
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381943,646,095 - 43,670,169 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1943,646,095 - 43,670,547 (-)EnsemblGRCh38hg38GRCh38
GRCh371944,150,247 - 44,174,321 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361948,842,088 - 48,866,342 (-)NCBINCBI36Build 36hg18NCBI36
Build 341948,844,571 - 48,866,342NCBI
Celera1940,952,740 - 40,977,471 (-)NCBICelera
Cytogenetic Map19q13.31NCBI
HuRef1940,580,832 - 40,605,572 (-)NCBIHuRef
CHM1_11944,151,900 - 44,176,634 (-)NCBICHM1_1
T2T-CHM13v2.01946,467,757 - 46,492,325 (-)NCBIT2T-CHM13v2.0
Plaur
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39724,161,857 - 24,175,393 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl724,161,909 - 24,175,393 (+)EnsemblGRCm39 Ensembl
GRCm38724,460,937 - 24,475,970 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl724,462,484 - 24,475,968 (+)EnsemblGRCm38mm10GRCm38
MGSCv37725,247,519 - 25,260,892 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36724,171,260 - 24,184,634 (+)NCBIMGSCv36mm8
Celera719,076,593 - 19,089,968 (+)NCBICelera
Cytogenetic Map7A3NCBI
cM Map710.92NCBI
Plaur
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8189,181,363 - 89,196,308 (+)NCBIGRCr8
mRatBN7.2180,053,440 - 80,068,384 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl180,050,324 - 80,068,595 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx185,446,800 - 85,461,972 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0193,996,901 - 94,011,843 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0187,202,621 - 87,217,793 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0181,328,171 - 81,344,954 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl181,328,183 - 81,344,708 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0182,587,242 - 82,602,924 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4179,708,646 - 79,712,881 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1179,786,756 - 79,791,047 (+)NCBI
Celera174,507,638 - 74,521,525 (+)NCBICelera
Cytogenetic Map1q21NCBI
Plaur
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555551,378,793 - 1,393,324 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555551,378,505 - 1,393,395 (-)NCBIChiLan1.0ChiLan1.0
PLAUR
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11111,476,804 - 111,490,876 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1111,476,893 - 111,490,880 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1110,957,047 - 110,970,796 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01112,087,347 - 112,101,189 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.11111,675,381 - 111,689,348 (+)NCBIUMICH_Zoey_3.1
Plaur
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934916,493,551 - 16,503,390 (-)NCBIHiC_Itri_2
SpeTri2.0NW_004936706840,968 - 855,552 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PLAUR
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1637,161,957 - 37,191,867 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366607316,711,568 - 16,734,916 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Plaur
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249071,174,448 - 1,189,377 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249071,174,648 - 1,188,919 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in PLAUR
182 total Variants

Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
10 4 21 3 2 5 14 12 21 3 6 3

Sequence


Ensembl Acc Id: ENSSSCT00000052717   ⟹   ENSSSCP00000052797
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl650,489,777 - 50,505,418 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000075337   ⟹   ENSSSCP00000073424
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl650,489,777 - 50,505,418 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000076928   ⟹   ENSSSCP00000061353
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl650,490,084 - 50,505,418 (-)Ensembl
RefSeq Acc Id: XM_003127198   ⟹   XP_003127246
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1650,489,773 - 50,505,453 (-)NCBI
Sequence:
RefSeq Acc Id: XP_003127246   ⟸   XM_003127198
- UniProtKB: A0A287B9N1 (UniProtKB/TrEMBL),   A0A8D1E2A2 (UniProtKB/TrEMBL),   A0A8D1UC26 (UniProtKB/TrEMBL),   A0A8D1X2V2 (UniProtKB/TrEMBL),   A0A8D0YBU1 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSSCP00000073424   ⟸   ENSSSCT00000075337
Ensembl Acc Id: ENSSSCP00000052797   ⟸   ENSSSCT00000052717
Ensembl Acc Id: ENSSSCP00000061353   ⟸   ENSSSCT00000076928
Protein Domains
UPAR/Ly6


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000032434 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00015041632 UniProtKB/TrEMBL
  ENSSSCG00030073581 UniProtKB/TrEMBL
  ENSSSCG00035004267 UniProtKB/TrEMBL
  ENSSSCG00040028403 UniProtKB/TrEMBL
  ENSSSCG00045024410 UniProtKB/TrEMBL
  ENSSSCG00050014858 UniProtKB/TrEMBL
  ENSSSCG00055026925 UniProtKB/TrEMBL
  ENSSSCG00060078184 UniProtKB/TrEMBL
  ENSSSCG00065051076 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000052717 ENTREZGENE
  ENSSSCT00000052717.2 UniProtKB/TrEMBL
  ENSSSCT00000075337.1 UniProtKB/TrEMBL
  ENSSSCT00000076928.1 UniProtKB/TrEMBL
  ENSSSCT00015055660.1 UniProtKB/TrEMBL
  ENSSSCT00015055706.1 UniProtKB/TrEMBL
  ENSSSCT00015055775.1 UniProtKB/TrEMBL
  ENSSSCT00030103053.1 UniProtKB/TrEMBL
  ENSSSCT00030103057.1 UniProtKB/TrEMBL
  ENSSSCT00030103066.1 UniProtKB/TrEMBL
  ENSSSCT00035005322.1 UniProtKB/TrEMBL
  ENSSSCT00035005324.1 UniProtKB/TrEMBL
  ENSSSCT00035005325.1 UniProtKB/TrEMBL
  ENSSSCT00040038126.1 UniProtKB/TrEMBL
  ENSSSCT00040038157.1 UniProtKB/TrEMBL
  ENSSSCT00040038245.1 UniProtKB/TrEMBL
  ENSSSCT00045041654.1 UniProtKB/TrEMBL
  ENSSSCT00045041724.1 UniProtKB/TrEMBL
  ENSSSCT00045041782.1 UniProtKB/TrEMBL
  ENSSSCT00050020104.1 UniProtKB/TrEMBL
  ENSSSCT00050020110.1 UniProtKB/TrEMBL
  ENSSSCT00050020118.1 UniProtKB/TrEMBL
  ENSSSCT00055053264.1 UniProtKB/TrEMBL
  ENSSSCT00055053294.1 UniProtKB/TrEMBL
  ENSSSCT00055053325.1 UniProtKB/TrEMBL
  ENSSSCT00060107881.1 UniProtKB/TrEMBL
  ENSSSCT00060107886.1 UniProtKB/TrEMBL
  ENSSSCT00065069941.1 UniProtKB/TrEMBL
  ENSSSCT00065069944.1 UniProtKB/TrEMBL
  ENSSSCT00065069947.1 UniProtKB/TrEMBL
Gene3D-CATH 2.10.60.10 UniProtKB/TrEMBL
InterPro CD59_antigen_CS UniProtKB/TrEMBL
  LY6_UPA_recep-like UniProtKB/TrEMBL
  Snake_toxin-like_sf UniProtKB/TrEMBL
KEGG Report ssc:100521017 UniProtKB/TrEMBL
NCBI Gene PLAUR ENTREZGENE
PANTHER PTHR10624:SF6 UniProtKB/TrEMBL
  UROKINASE PLASMINOGEN ACTIVATOR SURFACE RECEPTOR-RELATED UniProtKB/TrEMBL
Pfam UPAR_LY6 UniProtKB/TrEMBL
PROSITE LY6_UPAR UniProtKB/TrEMBL
SMART SM00134 UniProtKB/TrEMBL
Superfamily-SCOP SSF57302 UniProtKB/TrEMBL
UniProt A0A287B9N1 ENTREZGENE
  A0A8D0NRC3_PIG UniProtKB/TrEMBL
  A0A8D0YBI1_PIG UniProtKB/TrEMBL
  A0A8D0YBU1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0YG91_PIG UniProtKB/TrEMBL
  A0A8D0YJU5_PIG UniProtKB/TrEMBL
  A0A8D1E2A2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1E3J6_PIG UniProtKB/TrEMBL
  A0A8D1E4E2_PIG UniProtKB/TrEMBL
  A0A8D1RTT4_PIG UniProtKB/TrEMBL
  A0A8D1UC26 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1X2V2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1ZCR1_PIG UniProtKB/TrEMBL
UniProt Secondary A0A287B9N1 UniProtKB/TrEMBL
  A0A5G2QH64 UniProtKB/TrEMBL
  A0A5G2RLW7 UniProtKB/TrEMBL
VGNC ID VGNC:91512 ENTREZGENE