GLB1 (galactosidase beta 1) - Rat Genome Database

Name: GLB1
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Advanced Search (OLGA)

Gene: GLB1 (galactosidase beta 1) Canis lupus familiaris

Analyze

Symbol:

GLB1

Name:

galactosidase beta 1

RGD ID:

12221620

Description:

ENCODES a protein that exhibits beta-galactosidase activity (ortholog); galactoside binding (ortholog); INVOLVED IN galactose catabolic process (ortholog); response to cortisone (ortholog); response to Thyroglobulin triiodothyronine (ortholog); PARTICIPATES IN Fabry disease pathway; galactose metabolic pathway; galactosemia pathway; ASSOCIATED WITH GM1 gangliosidosis; atopic dermatitis (ortholog); bone development disease (ortholog); FOUND IN lysosome (ortholog)

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

acid beta-galactosidase; beta-galactosidase; lactase; lysosomal beta-galactosidase

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	GLB1 (galactosidase beta 1)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Treefam
Mus musculus (house mouse):	Glb1 (galactosidase, beta 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Glb1 (galactosidase, beta 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Glb1 (galactosidase beta 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	GLB1 (galactosidase beta 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Glb1 (galactosidase beta 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	GLB1 (galactosidase beta 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	GLB1 (galactosidase beta 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Glb1 (galactosidase beta 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	23	3,721,768 - 3,814,209 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	23	3,732,040 - 3,814,191 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	23	3,776,393 - 3,858,177 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	23	3,992,209 - 4,074,051 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	23	3,992,152 - 4,074,337 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	23	3,826,915 - 3,908,721 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	23	3,954,230 - 4,036,008 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	23	3,927,851 - 4,009,519 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

atopic dermatitis (ISO)

bone development disease (ISO)

contact dermatitis (ISO)

Corneal Opacity (ISO)

genetic disease (ISO)

GM1 gangliosidosis (IAGP,ISO)

GM1 gangliosidosis type 1 (ISO)

GM1 gangliosidosis type 2 (ISO)

GM1 gangliosidosis type 3 (ISO)

high grade glioma (ISO)

intellectual disability (ISO)

mucopolysaccharidosis IV (ISO)

mucopolysaccharidosis type IVB (ISO)

neuronal ceroid lipofuscinosis 6A (ISO)

osteochondrodysplasia (ISO)

osteogenesis imperfecta type 7 (ISO)

Otitis Media with Effusion (ISO)

progressive familial intrahepatic cholestasis (ISO)

schizophrenia (ISO)

spastic ataxia (ISO)

spondyloepiphyseal dysplasia (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

carbohydrate metabolic process (IEA)

galactose catabolic process (IBA,ISO)

ganglioside catabolic process (IEA)

glycoprotein catabolic process (IEA)

keratan sulfate catabolic process (IEA)

response to cortisone (ISO)

response to Thyroglobulin triiodothyronine (ISO)

Cellular Component

cytoplasm (IEA)

extracellular space (IEA)

Golgi apparatus (IEA)

intracellular membrane-bounded organelle (IEA)

lysosome (IEA,ISO)

membrane (IEA)

vacuole (IBA)

Molecular Function

beta-galactosidase activity (IBA,IEA,ISO,ISS)

galactoside binding (ISO)

hydrolase activity (IEA)

hydrolase activity, acting on glycosyl bonds (IEA)

hydrolase activity, hydrolyzing O-glycosyl compounds (IEA)

protein binding (ISO)

protein homodimerization activity (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

Fabry disease pathway (ISO)

galactose metabolic pathway (ISO)

galactosemia pathway (ISO)

Gaucher's disease pathway (ISO)

Krabbe disease pathway (ISO)

metachromatic leukodystrophy pathway (ISO)

sphingolipid metabolic pathway (ISO)

References

Additional References at PubMed

PMID:8725782	PMID:18088383	PMID:19607915	PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

GLB1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	23	3,721,768 - 3,814,209 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	23	3,732,040 - 3,814,191 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	23	3,776,393 - 3,858,177 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	23	3,992,209 - 4,074,051 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	23	3,992,152 - 4,074,337 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	23	3,826,915 - 3,908,721 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	23	3,954,230 - 4,036,008 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	23	3,927,851 - 4,009,519 (+)	NCBI		UU_Cfam_GSD_1.0

GLB1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	32,961,108 - 33,097,146 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	32,996,609 - 33,097,202 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	33,002,600 - 33,138,638 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	33,013,104 - 33,113,698 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	3	33,013,234 - 33,113,632	NCBI
Celera	3	32,980,743 - 33,081,754 (-)	NCBI		Celera
Cytogenetic Map	3	p22.3	NCBI
HuRef	3	32,977,821 - 33,078,667 (-)	NCBI		HuRef
CHM1_1	3	32,988,097 - 33,088,744 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	3	32,962,888 - 33,098,917 (-)	NCBI		T2T-CHM13v2.0

Glb1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	114,230,146 - 114,303,447 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	114,230,144 - 114,303,966 (+)	Ensembl		GRCm39 Ensembl
GRCm38	9	114,401,078 - 114,474,379 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	114,401,076 - 114,474,898 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	114,310,237 - 114,383,495 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	9	114,249,817 - 114,323,075 (+)	NCBI		MGSCv36	mm8
Celera	9	114,872,858 - 114,948,660 (+)	NCBI		Celera
Cytogenetic Map	9	F3	NCBI
cM Map	9	64.4	NCBI

Glb1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	122,963,718 - 123,036,326 (+)	NCBI		GRCr8
mRatBN7.2	8	114,085,508 - 114,158,127 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	114,085,508 - 114,158,127 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	8	119,702,274 - 119,775,293 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	117,901,534 - 117,974,533 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	115,744,315 - 115,817,349 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	122,439,328 - 122,511,939 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	122,439,328 - 122,511,939 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	121,752,146 - 121,824,793 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	118,791,550 - 118,864,281 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	8	113,332,049 - 113,404,466 (+)	NCBI		Celera
Cytogenetic Map	8	q32	NCBI

Glb1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955421	231,076 - 312,500 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955421	230,957 - 311,504 (-)	NCBI	ChiLan1.0	ChiLan1.0

GLB1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	32,943,061 - 33,083,071 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	32,947,825 - 33,088,024 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	32,892,039 - 33,031,959 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	33,231,208 - 33,336,804 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	33,231,209 - 33,336,804 (-)	Ensembl	panpan1.1		panPan2

Glb1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	190,209,844 - 190,301,836 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936473	23,348,416 - 23,440,196 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936473	23,348,431 - 23,440,271 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

GLB1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	18,878,612 - 18,953,146 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	18,878,407 - 18,978,999 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

GLB1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	15	77,480,895 - 77,592,130 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	15	77,480,598 - 77,592,120 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666041	50,859,532 - 50,971,400 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Glb1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624788	10,970,652 - 11,111,722 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624788	10,970,657 - 11,110,839 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in GLB1
798 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001037641	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022408379	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022408380	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000023	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF056084	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF170795	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY633753	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY639622	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY695399	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY695400	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY695401	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY695402	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY695403	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY695404	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY695405	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY756094	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY756095	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY789110	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY789111	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY789112	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY897615	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DQ196436	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000255	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000062	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000059	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000023	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000007487 ⟹ ENSCAFP00000006929

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	23	3,732,040 - 3,814,191 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000038223 ⟹ ENSCAFP00000033911

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	23	3,735,936 - 3,814,191 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000067124 ⟹ ENSCAFP00000048229

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	23	3,735,936 - 3,814,191 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000068885 ⟹ ENSCAFP00000051318

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	23	3,732,040 - 3,814,191 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000077663 ⟹ ENSCAFP00000063630

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	23	3,732,040 - 3,814,191 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000084237 ⟹ ENSCAFP00000054350

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	23	3,734,402 - 3,814,191 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845041332 ⟹ ENSCAFP00845032404

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	23	3,992,152 - 4,074,337 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845041426 ⟹ ENSCAFP00845032482

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	23	4,013,322 - 4,074,337 (+)	Ensembl

RefSeq Acc Id:

NM_001037641 ⟹ NP_001032730

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	23	3,732,097 - 3,813,918 (+)	NCBI
Dog10K_Boxer_Tasha	23	3,776,393 - 3,858,177 (+)	NCBI
ROS_Cfam_1.0	23	3,992,209 - 4,074,051 (+)	NCBI
UMICH_Zoey_3.1	23	3,826,915 - 3,908,721 (+)	NCBI
UNSW_CanFamBas_1.0	23	3,954,230 - 4,036,008 (+)	NCBI
UU_Cfam_GSD_1.0	23	3,927,851 - 4,009,519 (+)	NCBI

Sequence:

show sequence

ATGGCGCGGCCCGCGGCGGTTCGCGTGCTCTGGGCGCTGCTGCTGCCGCTGCTGCTGGGCTCTG
CGCGCGGCCTGCGGAATGCTTCCCAGAGGACATTCACAATTGACTACAGCCACAACCGCTTCCT
GAAGGACGGCCAGCCCTTCCGCTACATTTCGGGAAGCATTCACTATTCCCGCGTGCCCCGCTTC
TACTGGAAGGACCGGCTGCTGAAGATGAAGATGGCTGGGCTGAATGCCATCCAGACGTACGTGC
CCTGGAACTTTCACGAACCCCAGCCGGGACAGTACCAGTTTTCTGGGGAGCAGGATGTGGAATA
TTTTATTAAGCTGGCCCATGAGCTGGGACTGCTGGTCATCCTGAGGCCGGGACCCTATATCTGT
GCAGAGTGGGACATGGGAGGATTACCTGCTTGGCTATTATTAAAAGAATCTATTATTCTCCGTT
CTTCTGATCCAGATTACCTTGCAGCTGTGGACAAATGGTTGGGAGTCCTCCTGCCCAAGATGAA
GCCTCTCCTCTATCAGAACGGAGGGCCGATTATAACCATGCAGGTTGAAAATGAATATGGCAGC
TACTTTACCTGCGATTATGACTACCTGCGTTTCCTGCAGAAGCTCTTCCACCACCACCTGGGCA
ATGATGTACTTCTGTTCACCACTGATGGGGCAAATGAAAAGTTTCTGCAGTGCGGGGCTCTGCA
GGGCCTCTATGCCACAGTGGACTTTGGACCAGGTGCCAACATCACTGCTGCTTTCCAAATCCAG
AGAAAGAGTGAGCCCAAAGGACCATTGGTGAATTCTGAATTCTATACCGGCTGGTTGGATCATT
GGGGCCAGCCACACTCAACAGTGAGGACTGAAGTGGTGGCTTCCTCCCTCCATGATATACTTGC
CCATGGGGCAAATGTGAACTTGTACATGTTCATAGGTGGGACCAATTTTGCCTATTGGAATGGG
GCCAACATGCCCTACCAAGCACAGCCCACCAGTTACGACTATGATGCCCCACTGAGCGAGGCAG
GGGACCTCACTGAGAAGTATTTTGCTCTGCGAGAAGTTATTCGGAAGTTTGAAAAAGTACCAGA
AGGTTTTATCCCTCCGTCTACACCCAAGTTTGCATATGGAAAAGTTGCTCTGAAGAAGTTAAAG
ACGGTGGAGGAGGCCCTGAATGTTCTGTGTCCGCCTGGGCCCATAAACAGCCTTTATCCCTTGA
CGTTTATCCAGGTGAAACAGTATTTCGGTTTTGTGATGTACCGAACAACACTTCCTCAAGACTG
CAGTGACCCCACACCCCTGTCTTCACCCCTCAGTGGAGTCCACGACCGCGCCTATGTCTCTGTG
GATGGGGTGCCCCAGGGAGTCATGGAGCGAAGTAATGTCATCACTCTGAACATAACCGGGAAGG
CTGGAGCCACTCTGGACCTGCTGGTGGAGAACATGGGACGTGTGAACTATGGCAGATATATCAA
TGATTTTAAGGGCCTTATTTCTAACCTGACCCTTGGGTCCAGTATCCTCACAAACTGGATGATC
TTCCCGTTGAACACTGAGGATGCAGTACGCAGCCACCTGGGAGGCTGGCATGGCCCTAACAATG
GCCGCCATGATAAAACCTTTGCCCACCGCTCGTCTAACTACACGCTCCCGGCCTTTTATATGGG
GAACTTCTCTATTCCCAGTGGGATCCCAGACTTGCCCCAGGACACCTTTATCCAGTTTCCTGGA
TGGACCAAGGGTCAGGTGTGGATTAATGGCTTTAACCTCGGTCGATATTGGCCAGCACGGGGCC
CCCAGATGACTTTGTTTGTGCCACGGCACATCCTGGTGACATCAACCCCAAACACCATCATGGT
GCTGGAACTGGAGCACGCGCCCTGTGGTGACAGTGGCCCAGAAGTGTGCACCGTGGAGTTTGTG
GACAGGCCGGTTATCGGTGCCCCTCCAACCCCTGGTCATCCCCCTCCAGACCTGTCCCATCGAG
ACTTGAGACTGGACTATGTCTGATGATGA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001032730	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAC12775	(Get FASTA)	NCBI Sequence Viewer
	AAF89740	(Get FASTA)	NCBI Sequence Viewer
	AAT58221	(Get FASTA)	NCBI Sequence Viewer
	AAT65211	(Get FASTA)	NCBI Sequence Viewer
	AAU05604	(Get FASTA)	NCBI Sequence Viewer
	AAU05605	(Get FASTA)	NCBI Sequence Viewer
	AAU05606	(Get FASTA)	NCBI Sequence Viewer
	AAU05607	(Get FASTA)	NCBI Sequence Viewer
	AAU05608	(Get FASTA)	NCBI Sequence Viewer
	AAU05609	(Get FASTA)	NCBI Sequence Viewer
	AAU05610	(Get FASTA)	NCBI Sequence Viewer
	AAV32505	(Get FASTA)	NCBI Sequence Viewer
	AAV32506	(Get FASTA)	NCBI Sequence Viewer
	AAV58822	(Get FASTA)	NCBI Sequence Viewer
	AAV58823	(Get FASTA)	NCBI Sequence Viewer
	AAV58824	(Get FASTA)	NCBI Sequence Viewer
	AAW78350	(Get FASTA)	NCBI Sequence Viewer
	ABA43388	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000006929.5
	ENSCAFP00000033911.4
	ENSCAFP00000048229.2
	ENSCAFP00000054350.1
	ENSCAFP00030042278.1
	ENSCAFP00030042283.1
	ENSCAFP00030042284.1
	ENSCAFP00040018195.1
	ENSCAFP00040018271.1
	ENSCAFP00040018369.1
	ENSCAFP00805026064
	ENSCAFP00845032404
	ENSCAFP00845032404.1
	ENSCAFP00845032482.1
GenBank Protein	Q9TRY9	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_001032730 ⟸ NM_001037641
- Peptide Label:	precursor
- UniProtKB:	O62800 (UniProtKB/Swiss-Prot), Q3HTI1 (UniProtKB/Swiss-Prot), Q9TRY9 (UniProtKB/Swiss-Prot), A0A8C0SB70 (UniProtKB/TrEMBL), A0A8I3PJJ8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MARPAAVRVLWALLLPLLLGSARGLRNASQRTFTIDYSHNRFLKDGQPFRYISGSIHYSRVPRF YWKDRLLKMKMAGLNAIQTYVPWNFHEPQPGQYQFSGEQDVEYFIKLAHELGLLVILRPGPYIC AEWDMGGLPAWLLLKESIILRSSDPDYLAAVDKWLGVLLPKMKPLLYQNGGPIITMQVENEYGS YFTCDYDYLRFLQKLFHHHLGNDVLLFTTDGANEKFLQCGALQGLYATVDFGPGANITAAFQIQ RKSEPKGPLVNSEFYTGWLDHWGQPHSTVRTEVVASSLHDILAHGANVNLYMFIGGTNFAYWNG ANMPYQAQPTSYDYDAPLSEAGDLTEKYFALREVIRKFEKVPEGFIPPSTPKFAYGKVALKKLK TVEEALNVLCPPGPINSLYPLTFIQVKQYFGFVMYRTTLPQDCSDPTPLSSPLSGVHDRAYVSV DGVPQGVMERSNVITLNITGKAGATLDLLVENMGRVNYGRYINDFKGLISNLTLGSSILTNWMI FPLNTEDAVRSHLGGWHGPNNGRHDKTFAHRSSNYTLPAFYMGNFSIPSGIPDLPQDTFIQFPG WTKGQVWINGFNLGRYWPARGPQMTLFVPRHILVTSTPNTIMVLELEHAPCGDSGPEVCTVEFV DRPVIGAPPTPGHPPPDLSHRDLRLDYV hide sequence

Ensembl Acc Id:

ENSCAFP00000051318 ⟸ ENSCAFT00000068885

Ensembl Acc Id:

ENSCAFP00000054350 ⟸ ENSCAFT00000084237

Ensembl Acc Id:

ENSCAFP00000063630 ⟸ ENSCAFT00000077663

Ensembl Acc Id:

ENSCAFP00000033911 ⟸ ENSCAFT00000038223

Ensembl Acc Id:

ENSCAFP00000048229 ⟸ ENSCAFT00000067124

Ensembl Acc Id:

ENSCAFP00000006929 ⟸ ENSCAFT00000007487

Ensembl Acc Id:

ENSCAFP00845032404 ⟸ ENSCAFT00845041332

Ensembl Acc Id:

ENSCAFP00845032482 ⟸ ENSCAFT00845041426

Protein Domains

Beta-galactosidase 1-like first all-beta Beta-galactosidase galactose-binding Calcineurin-like phosphoesterase Glycoside hydrolase 35 catalytic

Promoters

RGD ID:

13687381

Promoter ID:

EPDNEW_C5451

Type:

initiation region

Name:

GLB1_1

Description:

galactosidase beta 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	23	3,732,051 - 3,732,111	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000004652	Ensembl, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ENSCAFG00030026124	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ENSCAFG00040011223	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ENSCAFG00805018250	UniProtKB/Swiss-Prot
	ENSCAFG00845023378	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000007487.6	UniProtKB/Swiss-Prot
	ENSCAFT00000038223.4	UniProtKB/TrEMBL
	ENSCAFT00000067124.2	UniProtKB/TrEMBL
	ENSCAFT00000084237.2	UniProtKB/TrEMBL
	ENSCAFT00030048317.1	UniProtKB/Swiss-Prot
	ENSCAFT00030048324.1	UniProtKB/TrEMBL
	ENSCAFT00030048325.1	UniProtKB/TrEMBL
	ENSCAFT00040020956.1	UniProtKB/Swiss-Prot
	ENSCAFT00040021042.1	UniProtKB/TrEMBL
	ENSCAFT00040021164.1	UniProtKB/TrEMBL
	ENSCAFT00805033184	UniProtKB/Swiss-Prot
	ENSCAFT00845041332	ENTREZGENE
	ENSCAFT00845041332.1	UniProtKB/Swiss-Prot
	ENSCAFT00845041426.1	UniProtKB/TrEMBL
Gene3D-CATH	Galactose-binding domain-like	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Glycosidases	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	B-gal_1-like	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	BetaGal1-like_ABD1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	BetaGal_gal-bd	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Calcineurin-like_PHP_ApaH	UniProtKB/TrEMBL
	Galactose-bd-like_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Gly_Hdrlase_35_cat	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Glyco_hydro_35_CS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Glycoside_Hdrlase_35	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Glycoside_hydrolase_SF	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Metallo-depent_PP-like	UniProtKB/TrEMBL
KEGG Report	cfa:403873	UniProtKB/Swiss-Prot
NCBI Gene	GLB1	ENTREZGENE
PANTHER	BETA-GALACTOSIDASE	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PTHR23421	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	BetaGal_ABD_1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	BetaGal_gal-bd	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Glyco_hydro_35	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Metallophos	UniProtKB/TrEMBL
PIRSF	B-gal	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PRINTS	GLHYDRLASE35	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE	GLYCOSYL_HYDROL_F35	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF49785	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SSF51445	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SSF56300	UniProtKB/TrEMBL
UniProt	A0A8C0PME1_CANLF	UniProtKB/TrEMBL
	A0A8C0SB70	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3PJJ8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0SQ95_CANLF	UniProtKB/TrEMBL
	BGAL_CANLF	UniProtKB/Swiss-Prot
	O62800	ENTREZGENE
	Q29395_CANLF	UniProtKB/TrEMBL
	Q3HTI1	ENTREZGENE
	Q5UD51_CANLF	UniProtKB/TrEMBL
	Q5UD52_CANLF	UniProtKB/TrEMBL
	Q6DW09_CANLF	UniProtKB/TrEMBL
	Q9MZQ4_CANLF	UniProtKB/TrEMBL
	Q9TRY9	ENTREZGENE
UniProt Secondary	A0A8P0P3T2	UniProtKB/TrEMBL
	O62800	UniProtKB/Swiss-Prot
	Q3HTI1	UniProtKB/Swiss-Prot
VGNC ID	VGNC:41249	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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