Advanced Search (OLGA)

Gene: GLB1 (galactosidase beta 1) Pan paniscus

Analyze

Symbol:

GLB1

Name:

galactosidase beta 1

RGD ID:

11755893

Description:

ENCODES a protein that exhibits beta-galactosidase activity (ortholog); galactoside binding (ortholog); INVOLVED IN galactose catabolic process (ortholog); response to cortisone (ortholog); response to Thyroglobulin triiodothyronine (ortholog); PARTICIPATES IN Fabry disease pathway; galactose metabolic pathway; galactosemia pathway; ASSOCIATED WITH atopic dermatitis (ortholog); bone development disease (ortholog); contact dermatitis (ortholog); FOUND IN cytoplasm (inferred); extracellular space (inferred); Golgi apparatus (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

beta-galactosidase

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	GLB1 (galactosidase beta 1)	NCBI	Ortholog
Mus musculus (house mouse):	Glb1 (galactosidase, beta 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Glb1 (galactosidase, beta 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Glb1 (galactosidase beta 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	GLB1 (galactosidase beta 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Glb1 (galactosidase beta 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	GLB1 (galactosidase beta 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	GLB1 (galactosidase beta 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Glb1 (galactosidase beta 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	32,943,061 - 33,083,071 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	32,947,825 - 33,088,024 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	32,892,039 - 33,031,959 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	33,231,208 - 33,336,804 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	33,231,209 - 33,336,804 (-)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

atopic dermatitis (ISO)

bone development disease (ISO)

contact dermatitis (ISO)

Corneal Opacity (ISO)

D-bifunctional protein deficiency (ISO)

genetic disease (ISO)

GM1 gangliosidosis (ISO)

GM1 gangliosidosis type 1 (ISO)

GM1 gangliosidosis type 2 (ISO)

GM1 gangliosidosis type 3 (ISO)

high grade glioma (ISO)

intellectual disability (ISO)

Joubert syndrome 9 (ISO)

mucopolysaccharidosis IV (ISO)

mucopolysaccharidosis type IVB (ISO)

neuronal ceroid lipofuscinosis 6A (ISO)

osteochondrodysplasia (ISO)

osteogenesis imperfecta type 7 (ISO)

Otitis Media with Effusion (ISO)

progressive familial intrahepatic cholestasis (ISO)

Pseudo-Zellweger Syndrome (ISO)

schizophrenia (ISO)

spastic ataxia (ISO)

spondyloepiphyseal dysplasia (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

carbohydrate metabolic process (IEA)

galactose catabolic process (ISO)

ganglioside catabolic process (IEA)

glycoprotein catabolic process (IEA)

keratan sulfate proteoglycan catabolic process (IEA)

response to cortisone (ISO)

response to Thyroglobulin triiodothyronine (ISO)

Cellular Component

cytoplasm (IEA)

extracellular space (IEA)

Golgi apparatus (IEA)

intracellular membrane-bounded organelle (IEA)

lysosome (IEA)

membrane (IEA)

Molecular Function

beta-galactosidase activity (IEA,ISO)

galactoside binding (ISO)

hydrolase activity (IEA)

hydrolase activity, acting on glycosyl bonds (IEA)

hydrolase activity, hydrolyzing O-glycosyl compounds (IEA)

protein binding (ISO)

protein homodimerization activity (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

Fabry disease pathway (ISO)

galactose metabolic pathway (ISO)

galactosemia pathway (ISO)

Gaucher's disease pathway (ISO)

Krabbe disease pathway (ISO)

metachromatic leukodystrophy pathway (ISO)

sphingolipid metabolic pathway (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

GLB1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	32,943,061 - 33,083,071 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	32,947,825 - 33,088,024 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	32,892,039 - 33,031,959 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	33,231,208 - 33,336,804 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	33,231,209 - 33,336,804 (-)	Ensembl	panpan1.1		panPan2

GLB1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	32,961,108 - 33,097,146 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	32,996,609 - 33,097,202 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	33,002,600 - 33,138,638 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	33,013,104 - 33,113,698 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	3	33,013,234 - 33,113,632	NCBI
Celera	3	32,980,743 - 33,081,754 (-)	NCBI		Celera
Cytogenetic Map	3	p22.3	NCBI
HuRef	3	32,977,821 - 33,078,667 (-)	NCBI		HuRef
CHM1_1	3	32,988,097 - 33,088,744 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	3	32,962,888 - 33,098,917 (-)	NCBI		T2T-CHM13v2.0

Glb1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	114,230,146 - 114,303,447 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	114,230,144 - 114,303,966 (+)	Ensembl		GRCm39 Ensembl
GRCm38	9	114,401,078 - 114,474,379 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	114,401,076 - 114,474,898 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	114,310,237 - 114,383,495 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	9	114,249,817 - 114,323,075 (+)	NCBI		MGSCv36	mm8
Celera	9	114,872,858 - 114,948,660 (+)	NCBI		Celera
Cytogenetic Map	9	F3	NCBI
cM Map	9	64.4	NCBI

Glb1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	122,963,718 - 123,036,326 (+)	NCBI		GRCr8
mRatBN7.2	8	114,085,508 - 114,158,127 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	114,085,508 - 114,158,127 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	8	119,702,274 - 119,775,293 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	117,901,534 - 117,974,533 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	115,744,315 - 115,817,349 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	122,439,328 - 122,511,939 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	122,439,328 - 122,511,939 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	121,752,146 - 121,824,793 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	118,791,550 - 118,864,281 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	8	113,332,049 - 113,404,466 (+)	NCBI		Celera
Cytogenetic Map	8	q32	NCBI

Glb1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955421	231,076 - 312,500 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955421	230,957 - 311,504 (-)	NCBI	ChiLan1.0	ChiLan1.0

GLB1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	23	3,721,768 - 3,814,209 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	23	3,732,040 - 3,814,191 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	23	3,776,393 - 3,858,177 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	23	3,992,209 - 4,074,051 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	23	3,992,152 - 4,074,337 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	23	3,826,915 - 3,908,721 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	23	3,954,230 - 4,036,008 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	23	3,927,851 - 4,009,519 (+)	NCBI		UU_Cfam_GSD_1.0

Glb1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	190,209,844 - 190,301,836 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936473	23,348,416 - 23,440,196 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936473	23,348,431 - 23,440,271 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

GLB1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	18,878,612 - 18,953,146 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	18,878,407 - 18,978,999 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

GLB1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	15	77,480,895 - 77,592,130 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	15	77,480,598 - 77,592,120 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666041	50,859,532 - 50,971,400 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Glb1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624788	10,970,652 - 11,111,722 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624788	10,970,657 - 11,110,839 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003826128	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034956032	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034956033	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034956034	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034956035	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034956036	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034956037	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034956038	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055109605	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_004670486	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSPPAT00000052583 ⟹ ENSPPAP00000029732

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	3	33,231,209 - 33,336,804 (-)	Ensembl

Ensembl Acc Id:

ENSPPAT00000052594 ⟹ ENSPPAP00000029743

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	3	33,231,526 - 33,314,031 (-)	Ensembl

Ensembl Acc Id:

ENSPPAT00000052601 ⟹ ENSPPAP00000029749

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	3	33,231,526 - 33,311,773 (-)	Ensembl

RefSeq Acc Id:

XM_003826128 ⟹ XP_003826176

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	2	32,978,724 - 33,082,697 (-)	NCBI
NHGRI_mPanPan1	3	32,983,425 - 33,087,462 (-)	NCBI
Mhudiblu_PPA_v0	3	32,927,557 - 33,031,594 (-)	NCBI
PanPan1.1	3	33,231,209 - 33,336,804 (-)	NCBI

Sequence:

show sequence

CGGGCGGGGCGCGCGTCCTTCCAGGCAGCTAGGTCGCTTGTGCGTTCCGCTCCGGCCGCCCTTT
GCGCTTGGATCCACTTCCCCATCTGTAACGAGGTGTTGAGACGAGAATGCCACCCAGAGGATGT
TTGAAATTGACTATAGCCGGGACTGCTTCCTCAAGGATGGCCAGCCATTTCGCTACATCTCAGG
AAGCATTCACTACTCCCGTGTGCCCCGCTTCTACTGGAAGGACCGGCTGCTGAAGATGAAGATG
GCTGGGCTGAACGCCATCCAGACGTATGTGCCCTGGAACTTTCATGAGCCCTGGCCAGGACAGT
ACCAGTTTTCTGAGGACCATGATGTGGAATATTTTCTTCGGCTGGCTCATGAGCTGGGACTGCT
GGTTATCCTGAGGCCCGGGCCCTACATCTGTGCAGAGTGGGAAATGGGAGGATTACCTGCTTGG
CTGCTAGAGAAAGAGTCTATTCTTCTCCGCTCCTCCGACCCAGATTACCTGGCAGCTGTGGACA
AGTGGTTGGGAGTCCTTCTGCCCAAGATGAAGCCTCTCCTCTATCAGAATGGAGGGCCAGTTAT
AACAGTGCAGGTTGAAAATGAATATGGCAGCTACTTTGCCTGTGATTTTGACTACCTGCGCTTC
CTGCAGAAGCGCTTTCGCCACCATCTGGGCGATGATGTGGTTCTGTTTACCACTGATGGAGCAC
ATAAAACATTCCTGAAATGTGGGGCCCTGCAGGGCCTCTACACCACGGTGGACTTTGGAACAGG
CAGCAACATCACAGATGCTTTCCTAAGCCAGAGGAAGTGTGAGCCCAAAGGACCCTTGATCAAT
TCTGAATTCTATACTGGCTGGCTAGATCACTGGGGCCAACCTCACTCCACAATCAAGACCGAAG
CAGTGGCTTCCTCCCTCTATGATATACTTGCCCGTGGGGCGAGTGTGAACTTGTACATGTTTAT
AGGTGGGACCAATTTTGCCTATTGGAATGGGGCCAACTCACCCTATGCAGCACAGCCCACCAGC
TACGACTATGATGCCCCACTGAGTGAGGCTGGGGACCTCACTGAGAAGTATTTTGCTCTGCGAA
GCATCATCCAGAAGTTTGAAAAAGTACCAGAAGGTCCTATCCCTCCATCTACACCGAAGTTTGC
ATATGGAAAGGTCACTTTGGAAAAGTTAAAGACAGTGGGAGCAGCTCTGGACATTCTGTGTCCC
TCTGGGCCCATCAAAAGCCTTTATCCCTTGACATTTATCCAGGTGAAACAGCATTATGGGTTTG
TGCTGTACCGGACAACACTTCCTCAAGATTGCAGCAACCCAGCACCTCTCTCTTCACCCCTCAA
TGGAGTCCACGATCGAGCATATGTTGCTGTGGATGGGATCCCCCAGGGAGTCCTTGAGCGAAAC
AATGTGATCACTCTGAACATAACAGGGAAAGCTGGAGCCACGCTGGACCTTCTGGTAGAGAACA
TGGGACGTGTGAACTATGGCGCATATATCAACGATTTTAAGGGTTTGGTTTCTAACCTGACTCT
CAGTTCCAATATCCTCACGGACTGGACGATCTTTCCACTGGACACTGAGGATGCAGTGCGCAGC
CACCTGGGGGGCTGGGGACACTGTGACAGTGGCCACCATGATGAAGCCTGGGCCCACAACTCAT
CCAACTACACGCTCCCGGCCTTTTATATGGGGAACTTCTCCATTCCCAGTGGGATCCCAGACTT
GCCCCAGGACACCTTTATCCAGTTTCCTGGATGGACCAAGGGCCAGGTCTGGATTAATGGCTTT
AACCTTGGCCGCTATTGGCCAGCCCGGGGCCCTCAGTTGACCTTGTTTGTGCCCCAGCACATCC
TGATGACCTCGGCCCCAAACACCATCACCGTGCTGGAACTGGAGCGGGCACCCTGCAGCAGTGA
TGATCCAGAACTATGTGCTGTGACGTTCGTGGACAGGCCAGTTATTGGCTCATCTGTGACCTAC
GATCATCCCTCCAAACCTGTTGAAAAAAGACTCATGCCCCCACCCCCGCAAAAAAACAAAGATT
CATGGCTGGACCATGTATGATGATGAAAGCCTGTGTCTTTGAGGGATTCTACCCTGAACATACC
TCACAGATCCTCCCTGTCATGCCACATTTCACTGATTGGATTGTGGAAATGGAAAAGGAATTTA
GGATGTGCATTTTCACCTGAGGTTTCCCTGCATCCCTGCAGTGCCAAAGCCCCACCTTCAGGGA
CCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAAT
GGAAGCTTTAAAGGTGGTAGTGATTTTTATTTTGGAAGAATCATGTTACCTTTTTGTTAAATAA
AATTTGTACTCAAATGA

hide sequence

RefSeq Acc Id:

XM_034956032 ⟹ XP_034811923

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	2	32,978,724 - 33,083,071 (-)	NCBI
NHGRI_mPanPan1	3	32,983,425 - 33,087,843 (-)	NCBI
Mhudiblu_PPA_v0	3	32,927,557 - 33,031,954 (-)	NCBI

RefSeq Acc Id:

XM_034956033 ⟹ XP_034811924

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	2	32,978,724 - 33,082,958 (-)	NCBI
NHGRI_mPanPan1	3	32,983,425 - 33,087,728 (-)	NCBI
Mhudiblu_PPA_v0	3	32,927,557 - 33,031,865 (-)	NCBI

RefSeq Acc Id:

XM_034956034 ⟹ XP_034811925

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	2	32,979,344 - 33,083,063 (-)	NCBI
NHGRI_mPanPan1	3	32,987,966 - 33,088,024 (-)	NCBI
Mhudiblu_PPA_v0	3	32,931,628 - 33,031,959 (-)	NCBI

RefSeq Acc Id:

XM_034956035 ⟹ XP_034811926

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	2	32,973,936 - 33,083,063 (-)	NCBI
NHGRI_mPanPan1	3	32,978,693 - 33,088,019 (-)	NCBI
Mhudiblu_PPA_v0	3	32,922,880 - 33,031,958 (-)	NCBI

RefSeq Acc Id:

XM_034956036 ⟹ XP_034811927

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	2	32,973,936 - 33,083,062 (-)	NCBI
NHGRI_mPanPan1	3	32,979,246 - 33,088,019 (-)	NCBI
Mhudiblu_PPA_v0	3	32,923,444 - 33,031,957 (-)	NCBI

RefSeq Acc Id:

XM_034956037 ⟹ XP_034811928

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	2	32,943,061 - 33,083,062 (-)	NCBI
NHGRI_mPanPan1	3	32,947,825 - 33,088,018 (-)	NCBI
Mhudiblu_PPA_v0	3	32,892,039 - 33,031,957 (-)	NCBI

RefSeq Acc Id:

XM_034956038 ⟹ XP_034811929

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	2	32,978,724 - 33,083,061 (-)	NCBI
NHGRI_mPanPan1	3	32,983,425 - 33,087,847 (-)	NCBI
Mhudiblu_PPA_v0	3	32,927,557 - 33,031,955 (-)	NCBI

RefSeq Acc Id:

XM_055109605 ⟹ XP_054965580

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	2	32,943,061 - 33,083,062 (-)	NCBI
NHGRI_mPanPan1	3	32,947,858 - 33,088,018 (-)	NCBI

RefSeq Acc Id:

XR_004670486

Type:

NON-CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	2	32,973,936 - 33,083,062 (-)	NCBI
NHGRI_mPanPan1	3	32,978,691 - 33,088,019 (-)	NCBI
Mhudiblu_PPA_v0	3	32,922,878 - 33,031,957 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_003826176	(Get FASTA)	NCBI Sequence Viewer
	XP_034811923	(Get FASTA)	NCBI Sequence Viewer
	XP_034811924	(Get FASTA)	NCBI Sequence Viewer
	XP_034811925	(Get FASTA)	NCBI Sequence Viewer
	XP_034811926	(Get FASTA)	NCBI Sequence Viewer
	XP_034811927	(Get FASTA)	NCBI Sequence Viewer
	XP_034811928	(Get FASTA)	NCBI Sequence Viewer
	XP_034811929	(Get FASTA)	NCBI Sequence Viewer
	XP_054965580	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000029732.1
	ENSPPAP00000029743.1
	ENSPPAP00000029749.1

RefSeq Acc Id:	XP_003826176 ⟸ XM_003826128
- Peptide Label:	isoform X2
- UniProtKB:	A0A2R9BMT9 (UniProtKB/TrEMBL), A0A2R9BJA9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MFEIDYSRDCFLKDGQPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYVPWNFHEPWPG QYQFSEDHDVEYFLRLAHELGLLVILRPGPYICAEWEMGGLPAWLLEKESILLRSSDPDYLAAV DKWLGVLLPKMKPLLYQNGGPVITVQVENEYGSYFACDFDYLRFLQKRFRHHLGDDVVLFTTDG AHKTFLKCGALQGLYTTVDFGTGSNITDAFLSQRKCEPKGPLINSEFYTGWLDHWGQPHSTIKT EAVASSLYDILARGASVNLYMFIGGTNFAYWNGANSPYAAQPTSYDYDAPLSEAGDLTEKYFAL RSIIQKFEKVPEGPIPPSTPKFAYGKVTLEKLKTVGAALDILCPSGPIKSLYPLTFIQVKQHYG FVLYRTTLPQDCSNPAPLSSPLNGVHDRAYVAVDGIPQGVLERNNVITLNITGKAGATLDLLVE NMGRVNYGAYINDFKGLVSNLTLSSNILTDWTIFPLDTEDAVRSHLGGWGHCDSGHHDEAWAHN SSNYTLPAFYMGNFSIPSGIPDLPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQLTLFVPQH ILMTSAPNTITVLELERAPCSSDDPELCAVTFVDRPVIGSSVTYDHPSKPVEKRLMPPPPQKNK DSWLDHV hide sequence

RefSeq Acc Id:	XP_034811928 ⟸ XM_034956037
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_034811926 ⟸ XM_034956035
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_034811927 ⟸ XM_034956036
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_034811929 ⟸ XM_034956038
- Peptide Label:	isoform X8
- UniProtKB:	A0A2R9BK48 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_034811923 ⟸ XM_034956032
- Peptide Label:	isoform X1
- UniProtKB:	A0A2R9BJA9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_034811924 ⟸ XM_034956033
- Peptide Label:	isoform X2
- UniProtKB:	A0A2R9BMT9 (UniProtKB/TrEMBL), A0A2R9BJA9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_034811925 ⟸ XM_034956034
- Peptide Label:	isoform X3

Ensembl Acc Id:

ENSPPAP00000029732 ⟸ ENSPPAT00000052583

Ensembl Acc Id:

ENSPPAP00000029743 ⟸ ENSPPAT00000052594

Ensembl Acc Id:

ENSPPAP00000029749 ⟸ ENSPPAT00000052601

RefSeq Acc Id:	XP_054965580 ⟸ XM_055109605
- Peptide Label:	isoform X7

Protein Domains

Beta-galactosidase 1-like first all-beta Beta-galactosidase galactose-binding Glycoside hydrolase 35 catalytic

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000037867	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000052583.1	UniProtKB/TrEMBL
	ENSPPAT00000052594.1	UniProtKB/TrEMBL
	ENSPPAT00000052601.1	UniProtKB/TrEMBL
Gene3D-CATH	Galactose-binding domain-like	UniProtKB/TrEMBL
	Glycosidases	UniProtKB/TrEMBL
InterPro	B-gal_1-like	UniProtKB/TrEMBL
	BetaGal1-like_ABD1	UniProtKB/TrEMBL
	BetaGal_gal-bd	UniProtKB/TrEMBL
	Galactose-bd-like_sf	UniProtKB/TrEMBL
	Gly_Hdrlase_35_cat	UniProtKB/TrEMBL
	Glyco_hydro_35_CS	UniProtKB/TrEMBL
	Glycoside_Hdrlase_35	UniProtKB/TrEMBL
	Glycoside_hydrolase_SF	UniProtKB/TrEMBL
KEGG Report	pps:100978745	UniProtKB/TrEMBL
NCBI Gene	GLB1	ENTREZGENE
PANTHER	PTHR23421	UniProtKB/TrEMBL
Pfam	BetaGal_ABD_1	UniProtKB/TrEMBL
	BetaGal_gal-bd	UniProtKB/TrEMBL
	Glyco_hydro_35	UniProtKB/TrEMBL
PIRSF	B-gal	UniProtKB/TrEMBL
PRINTS	GLHYDRLASE35	UniProtKB/TrEMBL
PROSITE	GLYCOSYL_HYDROL_F35	UniProtKB/TrEMBL
Superfamily-SCOP	SSF49785	UniProtKB/TrEMBL
	SSF51445	UniProtKB/TrEMBL
UniProt	A0A2R9BJA9	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R9BK48	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R9BMT9	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

Imported Annotations - SMPDB

Send us a Message

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

Imported Annotations - SMPDB