TP73 (tumor protein p73) - Rat Genome Database

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Gene: TP73 (tumor protein p73) Canis lupus familiaris
Analyze
Symbol: TP73
Name: tumor protein p73
RGD ID: 12216177
Description: ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN cerebrospinal fluid secretion (ortholog); digestive tract morphogenesis (ortholog); DNA damage response (ortholog); PARTICIPATES IN altered p53 signaling pathway; Ras mediated signaling pathway; ASSOCIATED WITH adenoma (ortholog); adult T-cell leukemia/lymphoma (ortholog); alveolar rhabdomyosarcoma (ortholog); FOUND IN cell junction (ortholog); chromatin (ortholog); ciliary basal body (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: P73
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1558,194,385 - 58,241,159 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl558,187,826 - 58,240,839 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha558,188,725 - 58,251,651 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0558,379,191 - 58,448,746 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1558,393,659 - 58,456,555 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0558,262,432 - 58,325,352 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0558,652,679 - 58,715,711 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


1 to 20 of 45 rows

  
Object Symbol
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Original Reference(s)
TP73Dogadenoma  ISOTP73 (Homo sapiens)9068941DNA:hypermethylation:promoter: (human)RGDPMID:29945573 and REF_RGD_ID:151347590
TP73Dogbreast cancer  ISOTP73 (Homo sapiens)9068941DNA more ...RGDPMID:11103943 and REF_RGD_ID:2291831
TP73Dogbreast cancer  ISOTP73 (Homo sapiens)9068941DNA:deletion:intron:IVS1-489_-417del (human)RGDPMID:14732927 and REF_RGD_ID:151347588
TP73Dogbreast cancer disease_progressionISOTP73 (Homo sapiens)9068941DNA:polymorphismRGDPMID:16950799 and REF_RGD_ID:2290584
TP73Dogbreast cancer  ISOTP73 (Homo sapiens)9068941 RGDPMID:11139314 and REF_RGD_ID:2291830
TP73Dogbreast cancer no_associationISOTP73 (Homo sapiens)9068941DNA:mutationsRGDPMID:10634515 and REF_RGD_ID:2291835
TP73Dogbreast ductal carcinoma  ISOTP73 (Homo sapiens)9068941mRNA:decreased expression:breastRGDPMID:17011986 and REF_RGD_ID:2290492
TP73Dogcervical cancer susceptibilityISOTP73 (Homo sapiens)9068941DNA:SNPs:exon 2:4G>A more ...RGDPMID:30420492 and REF_RGD_ID:151347580
TP73Dogcervix uteri carcinoma in situ disease_progressionISOTP73 (Homo sapiens)9068941mRNA:increased expression:uterine cervixRGDPMID:11870517 and REF_RGD_ID:2290589
TP73Dogcolon adenocarcinoma  ISOTP73 (Homo sapiens)9068941mRNA:increased expression:colon (human)RGDPMID:30420492 and REF_RGD_ID:151347580
TP73Dogcolorectal adenocarcinoma exacerbatesISOTP73 (Homo sapiens)9068941protein:increased expression:colon (human)RGDPMID:19956069 and REF_RGD_ID:151347585
TP73Dogcolorectal cancer  ISOTP73 (Homo sapiens)9068941DNA:deletion:intron:IVS1-489_-417del (human)RGDPMID:14732927 and REF_RGD_ID:151347588
TP73Dogcolorectal cancer  ISOTP73 (Homo sapiens)9068941DNA:hypermethylation:promoter: (human)RGDPMID:29945573 and REF_RGD_ID:151347590
TP73Dogcolorectal cancer susceptibilityISOTP73 (Homo sapiens)9068941DNA:SNPs:exon 2:4G>A more ...RGDPMID:21672615 more ...
TP73Dogcolorectal cancer exacerbatesISOTP73 (Homo sapiens)9068941DNA:SNP:intron:g.3636226T>C (rs747828) (human)RGDPMID:31090204 and REF_RGD_ID:151347587
TP73DogEndometrial Neoplasms susceptibilityISOTP73 (Homo sapiens)9068941DNA:polymorphism:exonRGDPMID:15723718 and REF_RGD_ID:2298528
TP73DogEndometrial Neoplasms  ISOTP73 (Homo sapiens)9068941DNA:hypermethylationRGDPMID:16928264 and REF_RGD_ID:2290585
TP73DogEpstein-Barr virus infectious disease  ISOTP73 (Homo sapiens)9068941associated with stomach carcinoma and DNA:hypermethylation:promoter (human)RGDPMID:23829175 and REF_RGD_ID:151347586
TP73Doghepatocellular carcinoma exacerbatesISOTP73 (Homo sapiens)9068941protein:decreased phosphorylation:liver (human)RGDPMID:27359056 and REF_RGD_ID:151347579
TP73Doghepatocellular carcinoma treatmentISOTP73 (Homo sapiens)9068941human cells in a mouse modelRGDPMID:25371988 and REF_RGD_ID:151347596
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1 to 12 of 12 rows
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Original Reference(s)
TP73Dogchromosome 1p36 deletion syndrome  ISOTP73 (Homo sapiens)8554872ClinVar Annotator: match by term: Chromosome 1p36 deletion syndromeClinVar 
TP73DogCILIARY DYSKINESIA, PRIMARY, 47, AND LISSENCEPHALY  ISOTP73 (Homo sapiens)8554872ClinVar Annotator: match by term: Ciliary dyskinesia more ...ClinVarPMID:25741868 and PMID:34077761
TP73DogEhlers-Danlos syndrome spondylodysplastic type 2  ISOTP73 (Homo sapiens)8554872ClinVar Annotator: match by term: Ehlers-Danlos syndrome more ...ClinVarPMID:10862081 more ...
TP73Doggenetic disease  ISOTP73 (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVar 
TP73DogGoldberg-Shprintzen syndrome  ISOTP73 (Homo sapiens)8554872ClinVar Annotator: match by term: Shprintzen-Goldberg syndromeClinVarPMID:23892090 more ...
TP73Dogimmunodeficiency 16  ISOTP73 (Homo sapiens)8554872ClinVar Annotator: match by term: Combined immunodeficiency due to OX40 deficiencyClinVarPMID:10862081 more ...
TP73Dogimmunodeficiency 38  ISOTP73 (Homo sapiens)8554872ClinVar Annotator: match by term: Mendelian susceptibility to mycobacterial diseases due to complete ISG15 deficiencyClinVarPMID:10862081 more ...
TP73DogJoubert syndrome 25  ISOTP73 (Homo sapiens)8554872ClinVar Annotator: match by term: Joubert syndrome 25ClinVarPMID:10862081 more ...
TP73DogNeurodevelopmental Disorders  ISOTP73 (Homo sapiens)8554872ClinVar Annotator: match by term: Neurodevelopmental disorderClinVarPMID:25741868 and PMID:30057029
TP73DogPeroxisome Biogenesis Disorder, Complementation Group 7  ISOTP73 (Homo sapiens)8554872ClinVar Annotator: match by term: Peroxisome biogenesis disorder and complementation group 7ClinVarPMID:10862081 more ...
TP73Dogrespiratory failure  ISOTP73 (Homo sapiens)8554872ClinVar Annotator: match by term: Respiratory failureClinVarPMID:25741868 and PMID:34077761
TP73DogShprintzen-Goldberg Craniosynostosis  ISOTP73 (Homo sapiens)8554872ClinVar Annotator: match by term: Shprintzen-Goldberg syndromeClinVarPMID:23892090 more ...
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Original Reference(s)
TP73Dogadult T-cell leukemia/lymphoma  ISOTP73 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:26437031
TP73Dogalveolar rhabdomyosarcoma  ISOTP73 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:21245298
TP73DogBreast Neoplasms  ISOTP73 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:28212736
TP73DogInflammation  ISOTP73 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:28212736
TP73DogLung Neoplasms  ISOTP73 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:28212736
TP73DogNervous System Malformations  ISOTrp73 (Mus musculus)9068941CTD Direct Evidence: marker/mechanismCTDPMID:24190996
TP73DogNeurologic Manifestations  ISOTrp73 (Mus musculus)9068941CTD Direct Evidence: marker/mechanismCTDPMID:24190996
Object Symbol
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Original Reference(s)
TP73Dogotitis media  ISOTrp73 (Mus musculus)9068941OMIM:166760MouseDO 
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Original Reference(s)
TP73DogCILIARY DYSKINESIA, PRIMARY, 47, AND LISSENCEPHALY  ISOTP73 (Homo sapiens)7240710 OMIM 


Biological Process
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Original Reference(s)
TP73Dogapoptotic process involved_inIEAUniProtKB-KW:KW-0053150520179 UniProtGO_REF:0000043
TP73Dogapoptotic process involved_inIEAInterPro:IPR002117150520179 InterProGO_REF:0000002
TP73Dogcerebrospinal fluid secretion acts_upstream_of_or_withinISOMGI:18599119068941 PMID:10716451MGIPMID:10716451
TP73Dogdigestive tract morphogenesis acts_upstream_of_or_withinISOMGI:18599119068941 PMID:10716451MGIPMID:10716451
TP73DogDNA damage response involved_inISOTP73 (Homo sapiens)9068941 PMID:18174154UniProtPMID:18174154
TP73DogDNA damage response acts_upstream_of_or_withinISOTrp73 (Mus musculus)9068941 PMID:16044147MGIPMID:16044147
TP73Dogforebrain development acts_upstream_of_or_withinISOMGI:18599119068941 PMID:15525772MGIPMID:15525772
TP73Doghippocampus development acts_upstream_of_or_withinISOMGI:18599119068941 PMID:10716451MGIPMID:10716451
TP73Doginflammatory response acts_upstream_of_or_withinISOMGI:18599119068941 PMID:10716451MGIPMID:10716451
TP73Dogintrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator involved_inISOTP73 (Homo sapiens)9068941 PMID:18174154 and PMID:19490146UniProtPMID:18174154 and PMID:19490146
TP73Dogintrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator acts_upstream_ofISOMGI:2442925 and MGI:988349068941 PMID:15983387MGIPMID:15983387
TP73Dogkidney development  ISOTp73 (Rattus norvegicus)9068941 RGDPMID:15805112 and REF_RGD_ID:1599582
TP73Dognegative regulation of cardiac muscle cell proliferation acts_upstream_of_or_withinISOTP73 (Homo sapiens)9068941 PMID:18634800MGIPMID:18634800
TP73Dognegative regulation of cell population proliferation involved_inISOTP73 (Homo sapiens)9068941 PMID:12730672AgBasePMID:12730672
TP73Dognegative regulation of neuron apoptotic process acts_upstream_of_or_withinISOMGI:18599119068941 PMID:10894779 more ...MGIPMID:10894779 more ...
TP73Dognegative regulation of neuron apoptotic process acts_upstream_of_or_withinISOTrp73 (Mus musculus)9068941 PMID:12427836MGIPMID:12427836
TP73Dognegative regulation of neuron differentiation  ISOTp73 (Rattus norvegicus)9068941 RGDPMID:17353261 and REF_RGD_ID:2291838
TP73Dogneuron development acts_upstream_of_or_withinISOMGI:18599119068941 PMID:12427836MGIPMID:12427836
TP73Dogpositive regulation of apoptotic process  ISOTp73 (Rattus norvegicus)9068941 RGDPMID:15716325 and REF_RGD_ID:2291842
TP73Dogpositive regulation of apoptotic signaling pathway acts_upstream_of_or_withinISOPR:Q9QXE4-29068941 PMID:16044147MGIPMID:16044147
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Cellular Component
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Original Reference(s)
TP73Dogcell junction located_inISOTP73 (Homo sapiens)9068941 HPAGO_REF:0000052
TP73Dogcentrosome located_inIEAUniProtKB-SubCell:SL-0048150520179 UniProtGO_REF:0000044
TP73Dogchromatin  ISOTp73 (Rattus norvegicus)9068941 RGDPMID:15805112 and REF_RGD_ID:1599582
TP73Dogciliary basal body located_inISOTP73 (Homo sapiens)9068941 HPAGO_REF:0000052
TP73Dogcytoplasm located_inIEAUniProtKB-SubCell:SL-0086150520179 UniProtGO_REF:0000044
TP73Dogcytoplasm located_inIEAUniProtKB-KW:KW-0963150520179 UniProtGO_REF:0000043
TP73Dogendoplasmic reticulum located_inIEAUniProtKB-KW:KW-0256150520179 UniProtGO_REF:0000043
TP73Dogendoplasmic reticulum located_inIEAUniProtKB-SubCell:SL-0095150520179 UniProtGO_REF:0000044
TP73DogGolgi apparatus located_inISOTP73 (Homo sapiens)9068941 HPAGO_REF:0000052
TP73Dogintracellular membrane-bounded organelle located_inISOTP73 (Homo sapiens)9068941 HPAGO_REF:0000052
TP73Dognucleoplasm located_inISOTP73 (Homo sapiens)9068941 HPAGO_REF:0000052
TP73Dognucleus located_inIEAInterPro:IPR002117 and InterPro:IPR012346150520179 InterProGO_REF:0000002
TP73Dognucleus located_inIEAUniProtKB-KW:KW-0539150520179 UniProtGO_REF:0000043
TP73Dognucleus located_inIEAUniProtKB-SubCell:SL-0191150520179 UniProtGO_REF:0000044
TP73Dogplasma membrane located_inISOTP73 (Homo sapiens)9068941 HPAGO_REF:0000052
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Molecular Function
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Original Reference(s)
TP73DogDNA binding enablesIEAARBA:ARBA00029224150520179 UniProtGO_REF:0000117
TP73DogDNA binding enablesIEAUniProtKB-KW:KW-0238150520179 UniProtGO_REF:0000043
TP73DogDNA binding enablesIEAInterPro:IPR002117 and InterPro:IPR012346150520179 InterProGO_REF:0000002
TP73DogDNA-binding transcription activator activity, RNA polymerase II-specific enablesISOTP73 (Homo sapiens)9068941 PMID:16343436NTNU_SBPMID:16343436
TP73DogDNA-binding transcription activator activity, RNA polymerase II-specific enablesISOUniProtKB:P172089068941 PMID:18421303ParkinsonsUK-UCLPMID:18421303
TP73DogDNA-binding transcription factor activity enablesIEAARBA:ARBA00028295150520179 UniProtGO_REF:0000117
TP73DogDNA-binding transcription factor activity enablesIEAInterPro:IPR002117 more ...150520179 InterProGO_REF:0000002
TP73DogDNA-binding transcription factor activity, RNA polymerase II-specific enablesISOTP73 (Homo sapiens)9068941 PMID:24652652UniProtPMID:24652652
TP73DogDNA-binding transcription factor binding enablesISOUniProtKB:P172089068941 PMID:18421303ParkinsonsUK-UCLPMID:18421303
TP73Dogidentical protein binding enablesISOUniProtKB:O153509068941 PMID:10373484 more ...IntActPMID:10373484 more ...
TP73DogMDM2/MDM4 family protein binding enablesISOUniProtKB:Q009879068941 PMID:25417702CAFAPMID:25417702
TP73Dogmetal ion binding enablesIEAUniProtKB-KW:KW-0479150520179 UniProtGO_REF:0000043
TP73Dogp53 binding enablesISOUniProtKB:P046379068941 PMID:25417702CAFAPMID:25417702
TP73Dogprotein binding enablesISOUniProtKB:Q139509068941 PMID:25331851IntActPMID:25331851
TP73Dogprotein binding enablesISOUniProtKB:P469389068941 PMID:11278685IntActPMID:11278685
TP73Dogprotein binding enablesISOUniProtKB:P27958-PRO_00000375669068941 PMID:12730672AgBasePMID:12730672
TP73Dogprotein binding enablesISOUniProtKB:P469379068941 PMID:11278685 more ...IntActPMID:11278685 more ...
TP73Dogprotein binding enablesISOUniProtKB:P46934 more ...9068941 PMID:37219487IntActPMID:37219487
TP73Dogprotein binding enablesISOUniProtKB:P46934 and UniProtKB:P469379068941 PMID:35044719IntActPMID:35044719
TP73Dogprotein binding enablesISOUniProtKB:Q00987 and UniProtKB:Q094729068941 PMID:19218448IntActPMID:19218448
1 to 20 of 41 rows

RGD Manual Annotations


  
PMID:22301074   PMID:30032202  



TP73
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1558,194,385 - 58,241,159 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl558,187,826 - 58,240,839 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha558,188,725 - 58,251,651 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0558,379,191 - 58,448,746 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1558,393,659 - 58,456,555 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0558,262,432 - 58,325,352 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0558,652,679 - 58,715,711 (+)NCBIUU_Cfam_GSD_1.0
TP73
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3813,652,516 - 3,736,201 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl13,652,516 - 3,736,201 (+)EnsemblGRCh38hg38GRCh38
GRCh3713,569,080 - 3,652,765 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3613,558,989 - 3,639,716 (+)NCBINCBI36Build 36hg18NCBI36
Build 3413,592,285 - 3,673,013NCBI
Celera12,823,557 - 2,904,508 (+)NCBICelera
Cytogenetic Map1p36.32NCBI
HuRef12,864,839 - 2,947,956 (+)NCBIHuRef
CHM1_113,555,405 - 3,639,797 (+)NCBICHM1_1
T2T-CHM13v2.013,162,389 - 3,247,802 (+)NCBIT2T-CHM13v2.0
Trp73
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394154,140,706 - 154,224,332 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4154,140,706 - 154,224,665 (-)EnsemblGRCm39 Ensembl
GRCm384154,056,249 - 154,139,875 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4154,056,249 - 154,140,208 (-)EnsemblGRCm38mm10GRCm38
GRCm38.p6 Ensembl4154,056,253 - 154,140,208 (-)EnsemblGRCm38mm10GRCm38
MGSCv374153,430,358 - 153,514,317 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364152,902,644 - 152,984,008 (-)NCBIMGSCv36mm8
Celera4156,338,953 - 156,424,405 (-)NCBICelera
Cytogenetic Map4E2NCBI
cM Map483.79NCBI
Tp73
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85169,903,801 - 169,988,075 (-)NCBIGRCr8
mRatBN7.25164,621,377 - 164,703,958 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5164,621,377 - 164,681,128 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5167,325,484 - 167,385,231 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05169,146,894 - 169,206,634 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05169,109,342 - 169,169,082 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05171,355,876 - 171,415,354 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5171,355,876 - 171,415,354 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05174,889,051 - 174,901,875 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.05174,843,033 - 174,868,415 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45170,848,979 - 171,078,739 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.15170,861,458 - 170,885,614 (-)NCBI
Celera5162,833,132 - 162,892,871 (-)NCBICelera
Cytogenetic Map5q36NCBI
Tp73
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554867,914,440 - 7,952,982 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554867,914,608 - 7,961,992 (-)NCBIChiLan1.0ChiLan1.0
TP73
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21224,577,312 - 224,657,001 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11223,216,998 - 223,301,768 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v012,323,399 - 2,405,295 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.113,476,064 - 3,529,206 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl13,476,064 - 3,529,206 (+)Ensemblpanpan1.1panPan2
Tp73
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505829,244,172 - 29,294,165 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936737172,467 - 211,464 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936737171,894 - 211,464 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TP73
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl665,182,456 - 65,228,990 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1665,169,770 - 65,228,997 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2659,826,402 - 59,869,412 (-)NCBISscrofa10.2Sscrofa10.2susScr3
TP73
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.120127,958,002 - 128,035,792 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl20127,958,809 - 128,013,691 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605432,183,910 - 32,243,642 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tp73
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248186,775,599 - 6,809,289 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248186,775,588 - 6,817,187 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in TP73
694 total Variants



adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 22 16 6 6 6 6 33 22 12 14 10


1 to 30 of 44 rows
RefSeq Transcripts XM_005620440 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022418963 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022418964 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022418965 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022418967 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038476604 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038476605 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038476606 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038476607 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038476608 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038476609 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038476610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038522682 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038522684 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038522691 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038522708 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038522715 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038522724 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038537738 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038537739 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038537740 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038537741 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038537742 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038537743 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038537744 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038601900 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038601901 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038601902 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038601903 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038601904 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 30 of 44 rows

Ensembl Acc Id: ENSCAFT00000030985   ⟹   ENSCAFP00000028819
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl558,187,826 - 58,240,839 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000089665   ⟹   ENSCAFP00000053338
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl558,197,482 - 58,240,839 (+)Ensembl
RefSeq Acc Id: XM_022418963   ⟹   XP_022274671
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1558,194,385 - 58,241,159 (+)NCBI
Dog10K_Boxer_Tasha558,204,881 - 58,251,651 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038476604   ⟹   XP_038332532
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1558,403,689 - 58,456,555 (+)NCBI
RefSeq Acc Id: XM_038476605   ⟹   XP_038332533
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1558,403,689 - 58,456,555 (+)NCBI
RefSeq Acc Id: XM_038476606   ⟹   XP_038332534
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1558,403,690 - 58,456,555 (+)NCBI
RefSeq Acc Id: XM_038476607   ⟹   XP_038332535
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1558,409,810 - 58,456,555 (+)NCBI
RefSeq Acc Id: XM_038476608   ⟹   XP_038332536
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1558,403,691 - 58,456,555 (+)NCBI
RefSeq Acc Id: XM_038476609   ⟹   XP_038332537
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1558,393,659 - 58,456,555 (+)NCBI
RefSeq Acc Id: XM_038476610   ⟹   XP_038332538
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1558,403,691 - 58,456,555 (+)NCBI
RefSeq Acc Id: XM_038522682   ⟹   XP_038378610
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha558,198,753 - 58,251,651 (+)NCBI
RefSeq Acc Id: XM_038522684   ⟹   XP_038378612
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha558,198,753 - 58,251,651 (+)NCBI
RefSeq Acc Id: XM_038522691   ⟹   XP_038378619
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha558,198,754 - 58,251,651 (+)NCBI
RefSeq Acc Id: XM_038522708   ⟹   XP_038378636
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha558,198,755 - 58,251,651 (+)NCBI
RefSeq Acc Id: XM_038522715   ⟹   XP_038378643
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha558,188,725 - 58,251,651 (+)NCBI
RefSeq Acc Id: XM_038522724   ⟹   XP_038378652
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha558,198,755 - 58,251,651 (+)NCBI
RefSeq Acc Id: XM_038537738   ⟹   XP_038393666
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0558,662,707 - 58,715,711 (+)NCBI
RefSeq Acc Id: XM_038537739   ⟹   XP_038393667
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0558,662,707 - 58,715,711 (+)NCBI
RefSeq Acc Id: XM_038537740   ⟹   XP_038393668
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0558,662,708 - 58,715,711 (+)NCBI
RefSeq Acc Id: XM_038537741   ⟹   XP_038393669
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0558,668,862 - 58,715,711 (+)NCBI
RefSeq Acc Id: XM_038537742   ⟹   XP_038393670
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0558,662,709 - 58,715,711 (+)NCBI
RefSeq Acc Id: XM_038537743   ⟹   XP_038393671
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0558,652,679 - 58,715,711 (+)NCBI
RefSeq Acc Id: XM_038537744   ⟹   XP_038393672
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0558,662,709 - 58,715,711 (+)NCBI
RefSeq Acc Id: XM_038601900   ⟹   XP_038457828
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0558,272,461 - 58,325,352 (+)NCBI
RefSeq Acc Id: XM_038601901   ⟹   XP_038457829
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0558,272,461 - 58,325,352 (+)NCBI
RefSeq Acc Id: XM_038601902   ⟹   XP_038457830
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0558,272,462 - 58,325,352 (+)NCBI
RefSeq Acc Id: XM_038601903   ⟹   XP_038457831
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0558,278,616 - 58,325,352 (+)NCBI
RefSeq Acc Id: XM_038601904   ⟹   XP_038457832
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0558,272,463 - 58,325,352 (+)NCBI
RefSeq Acc Id: XM_038601905   ⟹   XP_038457833
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0558,262,432 - 58,325,352 (+)NCBI
RefSeq Acc Id: XM_038601906   ⟹   XP_038457834
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0558,272,463 - 58,325,352 (+)NCBI
RefSeq Acc Id: XM_038666486   ⟹   XP_038522414
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0558,389,114 - 58,448,746 (+)NCBI
RefSeq Acc Id: XM_038666487   ⟹   XP_038522415
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0558,389,114 - 58,448,746 (+)NCBI
RefSeq Acc Id: XM_038666488   ⟹   XP_038522416
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0558,389,114 - 58,448,746 (+)NCBI
RefSeq Acc Id: XM_038666490   ⟹   XP_038522418
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0558,395,388 - 58,448,746 (+)NCBI
RefSeq Acc Id: XM_038666491   ⟹   XP_038522419
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0558,379,191 - 58,448,746 (+)NCBI
RefSeq Acc Id: XM_038666492   ⟹   XP_038522420
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0558,438,993 - 58,448,746 (+)NCBI
1 to 30 of 40 rows
Protein RefSeqs XP_022274671 (Get FASTA)   NCBI Sequence Viewer  
  XP_038332532 (Get FASTA)   NCBI Sequence Viewer  
  XP_038332533 (Get FASTA)   NCBI Sequence Viewer  
  XP_038332534 (Get FASTA)   NCBI Sequence Viewer  
  XP_038332535 (Get FASTA)   NCBI Sequence Viewer  
  XP_038332536 (Get FASTA)   NCBI Sequence Viewer  
  XP_038332537 (Get FASTA)   NCBI Sequence Viewer  
  XP_038332538 (Get FASTA)   NCBI Sequence Viewer  
  XP_038378610 (Get FASTA)   NCBI Sequence Viewer  
  XP_038378612 (Get FASTA)   NCBI Sequence Viewer  
  XP_038378619 (Get FASTA)   NCBI Sequence Viewer  
  XP_038378636 (Get FASTA)   NCBI Sequence Viewer  
  XP_038378643 (Get FASTA)   NCBI Sequence Viewer  
  XP_038378652 (Get FASTA)   NCBI Sequence Viewer  
  XP_038393666 (Get FASTA)   NCBI Sequence Viewer  
  XP_038393667 (Get FASTA)   NCBI Sequence Viewer  
  XP_038393668 (Get FASTA)   NCBI Sequence Viewer  
  XP_038393669 (Get FASTA)   NCBI Sequence Viewer  
  XP_038393670 (Get FASTA)   NCBI Sequence Viewer  
  XP_038393671 (Get FASTA)   NCBI Sequence Viewer  
  XP_038393672 (Get FASTA)   NCBI Sequence Viewer  
  XP_038457828 (Get FASTA)   NCBI Sequence Viewer  
  XP_038457829 (Get FASTA)   NCBI Sequence Viewer  
  XP_038457830 (Get FASTA)   NCBI Sequence Viewer  
  XP_038457831 (Get FASTA)   NCBI Sequence Viewer  
  XP_038457832 (Get FASTA)   NCBI Sequence Viewer  
  XP_038457833 (Get FASTA)   NCBI Sequence Viewer  
  XP_038457834 (Get FASTA)   NCBI Sequence Viewer  
  XP_038522414 (Get FASTA)   NCBI Sequence Viewer  
  XP_038522415 (Get FASTA)   NCBI Sequence Viewer  
1 to 30 of 40 rows
1 to 5 of 36 rows
1 to 5 of 36 rows
RefSeq Acc Id: XP_022274671   ⟸   XM_022418963
- Peptide Label: isoform X28
- UniProtKB: A0A8C0KBY7 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSCAFP00000028819   ⟸   ENSCAFT00000030985
Ensembl Acc Id: ENSCAFP00000053338   ⟸   ENSCAFT00000089665
RefSeq Acc Id: XP_038332537   ⟸   XM_038476609
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038332532   ⟸   XM_038476604
- Peptide Label: isoform X7
p53 DNA-binding   p53 tetramerisation   SAM



1 to 39 of 39 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSCAFG00000019489 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00040007368 UniProtKB/TrEMBL
  ENSCAFG00845020265 UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000030985.5 UniProtKB/TrEMBL
  ENSCAFT00000089665.2 UniProtKB/TrEMBL
  ENSCAFT00000104236.1 UniProtKB/TrEMBL
  ENSCAFT00040014212.1 UniProtKB/TrEMBL
  ENSCAFT00845035689.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.150.50 UniProtKB/TrEMBL
  2.60.40.720 UniProtKB/TrEMBL
  4.10.170.10 UniProtKB/TrEMBL
InterPro p53-like_TF_DNA-bd UniProtKB/TrEMBL
  p53/RUNT-type_TF_DNA-bd_sf UniProtKB/TrEMBL
  p53_DNA-bd UniProtKB/TrEMBL
  p53_tetramer_sf UniProtKB/TrEMBL
  p53_tetrameristn UniProtKB/TrEMBL
  p53_tumour_suppressor UniProtKB/TrEMBL
  SAM UniProtKB/TrEMBL
  SAM/pointed_sf UniProtKB/TrEMBL
  Tumour-p73_SAM UniProtKB/TrEMBL
NCBI Gene TP73 ENTREZGENE
PANTHER PTHR11447 UniProtKB/TrEMBL
  PTHR11447:SF21 UniProtKB/TrEMBL
Pfam P53 UniProtKB/TrEMBL
  P53_tetramer UniProtKB/TrEMBL
  SAM_2 UniProtKB/TrEMBL
PRINTS P53SUPPRESSR UniProtKB/TrEMBL
PROSITE P53 UniProtKB/TrEMBL
SMART SAM UniProtKB/TrEMBL
Superfamily-SCOP p53 tetramerization domain UniProtKB/TrEMBL
  p53-like transcription factors UniProtKB/TrEMBL
  SSF47769 UniProtKB/TrEMBL
UniProt A0A8C0KBY7 ENTREZGENE
  A0A8C0QF19 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3P711_CANLF UniProtKB/TrEMBL
  A0A8P0P2Z4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0PQC9_CANLF UniProtKB/TrEMBL
  A0A8P0SNH1 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:47730 ENTREZGENE
1 to 39 of 39 rows