Symbol:
UBB
Name:
ubiquitin B
RGD ID:
11817219
Description:
INVOLVED IN adipose tissue development (ortholog); energy homeostasis (ortholog); fat pad development (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); FOUND IN mitochondrion (ortholog); neuron projection (ortholog); neuronal cell body (ortholog)
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
LOC100987088; polyubiquitin-B; ubiquitin
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Species
Gene symbol and name
Data Source
Assertion derived from
less info ...
Orthologs 1
Homo sapiens (human):
UBB (ubiquitin B) NCBI
Ortholog
Mus musculus (house mouse):
Ubb (ubiquitin B) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):
Ubb (ubiquitin B) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Canis lupus familiaris (dog):
UBB (ubiquitin B) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Ubb (ubiquitin B) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Sus scrofa (pig):
UBB (ubiquitin B) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):
UBB (ubiquitin B) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):
Ubb (ubiquitin B) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Latest Assembly:
Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 19 56,252,196 - 56,254,227 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 17 61,063,907 - 61,065,938 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 17 35,286,699 - 35,288,429 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 2A 110,578,715 - 110,580,217 (+) NCBI panpan1.1 PanPan1.1 panPan2
JBrowse:
View Region in Genome Browser (JBrowse)
Model
UBB Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 19 56,252,196 - 56,254,227 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 17 61,063,907 - 61,065,938 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 17 35,286,699 - 35,288,429 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 2A 110,578,715 - 110,580,217 (+) NCBI panpan1.1 PanPan1.1 panPan2
UBB Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 17 16,380,779 - 16,382,745 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 17 16,380,798 - 16,382,745 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 17 16,284,093 - 16,286,059 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 17 16,225,092 - 16,226,779 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 17 16,225,091 - 16,226,779 NCBI Celera 17 16,187,292 - 16,188,979 (+) NCBI Celera Cytogenetic Map 17 p11.2 NCBI HuRef 17 16,150,949 - 16,152,636 (+) NCBI HuRef CHM1_1 17 16,294,106 - 16,295,793 (+) NCBI CHM1_1 T2T-CHM13v2.0 17 16,283,097 - 16,285,063 (+) NCBI T2T-CHM13v2.0
Ubb Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 11 62,442,329 - 62,444,037 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 11 62,441,997 - 62,444,039 (+) Ensembl GRCm39 Ensembl GRCm38 11 62,551,171 - 62,553,213 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 11 62,551,171 - 62,553,213 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 11 62,365,006 - 62,366,714 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 11 62,367,697 - 62,369,407 (+) NCBI MGSCv36 mm8 Celera 11 69,470,925 - 69,472,633 (+) NCBI Celera Cytogenetic Map 11 B2 NCBI cM Map 11 38.46 NCBI
Ubb Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 10 47,746,923 - 47,748,628 (+) NCBI GRCr8 mRatBN7.2 10 47,247,630 - 47,249,335 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 10 47,245,637 - 47,249,333 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 10 51,951,219 - 51,952,925 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 10 51,441,764 - 51,443,470 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 10 46,945,175 - 46,946,881 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 10 48,880,231 - 48,881,896 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 10 48,881,049 - 48,881,881 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 10 48,664,227 - 48,665,056 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.1 10 48,752,613 - 48,753,069 NCBI Celera 10 46,494,897 - 46,496,578 (+) NCBI Celera Cytogenetic Map 10 q23 NCBI
UBB Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 5 39,533,365 - 39,535,120 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 5 39,511,426 - 39,535,815 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 5 39,679,659 - 39,681,890 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 5 39,643,511 - 39,645,744 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 5 39,640,787 - 39,645,440 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 5 39,615,228 - 39,617,465 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 5 39,560,488 - 39,562,718 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 5 39,752,689 - 39,754,922 (-) NCBI UU_Cfam_GSD_1.0
Ubb
UBB Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 12 59,171,289 - 59,172,841 (-) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 12 59,171,258 - 59,172,841 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 12 62,297,981 - 62,299,561 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
UBB
Ubb
.
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
RefSeq Acc Id:
XM_003831161 ⟹ XP_003831209
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source NHGRI_mPanPan1-v2 19 56,252,196 - 56,254,227 (-) NCBI NHGRI_mPanPan1 17 61,063,907 - 61,065,938 (-) NCBI Mhudiblu_PPA_v0 17 35,286,699 - 35,288,429 (+) NCBI PanPan1.1 2A 110,578,715 - 110,580,217 (+) NCBI
Sequence:
TCCAGAGCTTTCGAGGAAGGTTTCTTTAACTCAAATTCATCCGCCTGATAATTTTCTTATATTTTCCTAAAGAAGGAAGAGAAGCGCATAGAGGAGAAGGGAAATAATTTTTTAGGATCCTTTCTTAA
hide sequence
RefSeq Acc Id:
XP_003831209 ⟸ XM_003831161
- Sequence:
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGC
hide sequence
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2020-07-01
UBB
ubiquitin B
LOC100987088
ubiquitin
Symbol and/or name change
5135510 APPROVED
