GPR180 (G protein-coupled receptor 180) - Rat Genome Database

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Gene: GPR180 (G protein-coupled receptor 180) Pan paniscus
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Symbol: GPR180
Name: G protein-coupled receptor 180
RGD ID: 11720128
Description: INVOLVED IN G protein-coupled receptor signaling pathway (inferred); response to pheromone (inferred); ASSOCIATED WITH Anal Atresia, Hypospadias, and Penoscrotal Inversion (ortholog); Congenital Microcoria (ortholog); holoprosencephaly 5 (ortholog); FOUND IN membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: integral membrane protein GPR180
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21496,130,516 - 96,193,324 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11394,799,189 - 94,832,461 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01375,774,879 - 75,808,210 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11394,930,657 - 94,964,493 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1394,930,349 - 94,957,032 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
membrane  (IEA)

References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
GPR180
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21496,130,516 - 96,193,324 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11394,799,189 - 94,832,461 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01375,774,879 - 75,808,210 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11394,930,657 - 94,964,493 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1394,930,349 - 94,957,032 (+)Ensemblpanpan1.1panPan2
GPR180
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381394,601,857 - 94,634,661 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1394,601,857 - 94,634,661 (+)EnsemblGRCh38hg38GRCh38
GRCh371395,254,111 - 95,286,915 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361394,052,105 - 94,079,947 (+)NCBINCBI36Build 36hg18NCBI36
Celera1376,102,074 - 76,129,910 (+)NCBICelera
Cytogenetic Map13q32.1NCBI
HuRef1375,851,373 - 75,884,161 (+)NCBIHuRef
CHM1_11395,223,550 - 95,256,344 (+)NCBICHM1_1
T2T-CHM13v2.01393,805,369 - 93,838,171 (+)NCBIT2T-CHM13v2.0
Gpr180
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3914118,374,513 - 118,401,644 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl14118,374,570 - 118,400,673 (+)EnsemblGRCm39 Ensembl
GRCm3814118,137,105 - 118,164,232 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl14118,137,158 - 118,163,261 (+)EnsemblGRCm38mm10GRCm38
MGSCv3714118,536,349 - 118,563,454 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3614117,019,505 - 117,047,938 (+)NCBIMGSCv36mm8
Celera14116,691,545 - 116,719,686 (+)NCBICelera
Cytogenetic Map14E4NCBI
cM Map1461.78NCBI
Gpr180
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr815101,602,870 - 101,635,556 (+)NCBIGRCr8
mRatBN7.21595,195,782 - 95,224,955 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1595,199,777 - 95,228,373 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1599,104,681 - 99,128,263 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.015100,236,642 - 100,260,224 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01597,165,331 - 97,188,913 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.015103,340,387 - 103,369,633 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl15103,344,476 - 103,369,630 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.015106,779,454 - 106,808,159 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.415102,931,713 - 102,955,239 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.115102,947,492 - 102,971,018 (+)NCBI
Celera1594,051,859 - 94,075,480 (+)NCBICelera
Cytogenetic Map15q24NCBI
Gpr180
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540415,250,532 - 15,275,392 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540415,250,532 - 15,275,381 (-)NCBIChiLan1.0ChiLan1.0
GPR180
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12245,402,127 - 45,434,693 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2245,401,443 - 45,431,483 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2245,188,938 - 45,221,073 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02245,833,299 - 45,865,441 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2245,831,339 - 45,865,430 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12245,486,445 - 45,518,575 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02245,527,326 - 45,559,461 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02245,536,897 - 45,569,057 (+)NCBIUU_Cfam_GSD_1.0
Gpr180
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404945180,962,446 - 180,990,884 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647214,959,862 - 14,989,709 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647214,963,022 - 14,989,709 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GPR180
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1163,720,095 - 63,751,684 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11163,720,048 - 63,764,720 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21169,826,935 - 69,859,762 (-)NCBISscrofa10.2Sscrofa10.2susScr3
GPR180
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1373,429,949 - 73,460,134 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl373,430,165 - 73,458,011 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604629,819,561 - 29,854,657 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Gpr180
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248791,387,867 - 1,410,767 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248791,388,033 - 1,412,727 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSPPAT00000060521   ⟹   ENSPPAP00000037621
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1394,930,349 - 94,957,032 (+)Ensembl
Ensembl Acc Id: ENSPPAT00000060529   ⟹   ENSPPAP00000037629
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1394,930,982 - 94,957,032 (+)Ensembl
RefSeq Acc Id: XM_003832024   ⟹   XP_003832072
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21496,130,516 - 96,163,789 (+)NCBI
NHGRI_mPanPan11394,799,189 - 94,832,461 (+)NCBI
Mhudiblu_PPA_v01375,774,879 - 75,808,210 (+)NCBI
PanPan1.11394,930,657 - 94,964,493 (+)NCBI
Sequence:
RefSeq Acc Id: XR_010109695
Type: NON-CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21496,130,516 - 96,193,324 (+)NCBI
Protein Sequences
Protein RefSeqs XP_003832072 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000037621
  ENSPPAP00000037621.1
  ENSPPAP00000037629.1
RefSeq Acc Id: XP_003832072   ⟸   XM_003832024
- UniProtKB: A0A2R9C6S9 (UniProtKB/TrEMBL),   A0A2R9C759 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSPPAP00000037629   ⟸   ENSPPAT00000060529
Ensembl Acc Id: ENSPPAP00000037621   ⟸   ENSPPAT00000060521
Protein Domains
GPR180-like N-terminal   GPR180/TMEM145 transmembrane


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000041567 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000060521.1 UniProtKB/TrEMBL
  ENSPPAT00000060529.1 UniProtKB/TrEMBL
InterPro GPR180-like_N UniProtKB/TrEMBL
  GPR180/TMEM145 UniProtKB/TrEMBL
  Intimal_thickness-rel_rcpt UniProtKB/TrEMBL
KEGG Report pps:100976670 UniProtKB/TrEMBL
NCBI Gene GPR180 ENTREZGENE
PANTHER INTEGRAL MEMBRANE PROTEIN GPR180 UniProtKB/TrEMBL
  INTIMAL THICKNESS RECEPTOR-RELATED UniProtKB/TrEMBL
Pfam GP180_GOLD UniProtKB/TrEMBL
  GpcrRhopsn4 UniProtKB/TrEMBL
UniProt A0A2R9C6S9 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9C759 ENTREZGENE, UniProtKB/TrEMBL