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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:choroid plexus carcinoma
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Accession:DOID:5648 term browser browse the term
Definition:A choroid plexus cancer that has_material_basis_in epithelial cells of the choroid plexus. (DO)
Synonyms:exact_synonym: cancer of choroid plexus;   malignant neoplasm of choroid plexus;   malignant neoplasm of the choroid plexus
 related_synonym: malignant tumor of choroid plexus
 primary_id: MESH:C562943
 xref: GARD:8238;   NCI:C4533;   NCI:C4715
For additional species annotation, visit the Alliance of Genome Resources.


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choroid plexus carcinoma term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxo3 forkhead box O3 ISO ClinVar Annotator: match by term: Choroid plexus carcinoma ClinVar PMID:26822237 NCBI chr20:45,669,708...45,764,606
Ensembl chr20:45,672,995...45,764,561 		JBrowse link
G Nf2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor ISO ClinVar Annotator: match by term: Choroid plexus carcinoma ClinVar PMID:26822237 NCBI chr14:79,627,399...79,710,709
Ensembl chr14:79,627,399...79,710,667 		JBrowse link
G Nsd1 nuclear receptor binding SET domain protein 1 ISO ClinVar Annotator: match by term: Choroid plexus carcinoma ClinVar PMID:26822237 NCBI chr17:9,311,963...9,426,373
Ensembl chr17:9,315,237...9,425,358 		JBrowse link
G Tp53 tumor protein p53 ISO ClinVar Annotator: match by term: Choroid plexus carcinoma ClinVar PMID:1631137 PMID:1978757 PMID:8062826 PMID:8099841 PMID:8425176 More... NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 21128
    disease of cellular proliferation 7667
      cancer 5483
        cell type cancer 3731
          carcinoma 3200
            choroid plexus carcinoma 4
Path 2
Term Annotations click to browse term
  disease 21128
    disease of cellular proliferation 7667
      Neoplasms by Site 7121
        Nervous System Neoplasms 1615
          Central Nervous System Neoplasms 1413
            central nervous system cancer 766
              brain cancer 750
                supratentorial cancer 475
                  cerebrum cancer 422
                    cerebral ventricle cancer 9
                      choroid plexus cancer 4
                        choroid plexus carcinoma 4
paths to the root