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ONTOLOGY REPORT - ANNOTATIONS

Term:mRNA alternative polyadenylation
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Accession:GO:0110104 term browser browse the term
Definition:The process of generating multiple mRNA molecules with variable 3'-end length formation from a given pre-mRNA by differential use of cleavage and polyadenylation signals (pA signals).

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mRNA alternative polyadenylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpsf6 cleavage and polyadenylation specific factor 6 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936545:7,045,043...7,077,710
Ensembl chrNW_004936545:7,045,043...7,077,736 		JBrowse link
G Cpsf7 cleavage and polyadenylation specific factor 7 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936581:1,629,078...1,651,147
Ensembl chrNW_004936581:1,629,041...1,651,328 		JBrowse link
G Nudt21 nudix hydrolase 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:8,739,992...8,759,165
Ensembl chrNW_004936475:8,741,821...8,759,223 		JBrowse link
G Rbfox2 RNA binding fox-1 homolog 2 ISO RGD PMID:34731606 RGD:329845875 NCBI chrNW_004936492:4,624,013...4,826,715
Ensembl chrNW_004936492:4,645,167...4,821,291 		JBrowse link
G Virma vir like m6A methyltransferase associated involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936544:7,485,986...7,549,625
Ensembl chrNW_004936544:7,485,986...7,549,643 		JBrowse link
G Ythdc1 YTH N6-methyladenosine RNA binding protein C1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29799838) Ensembl
MGI		 PMID:29799838 GO_REF:0000107 NCBI chrNW_004936582:130,593...161,275
Ensembl chrNW_004936582:126,736...161,586 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15971
    metabolic process 9633
      organic substance metabolic process 9208
        macromolecule metabolic process 7680
          nucleic acid metabolic process 4278
            nucleic acid catabolic process 652
              mRNA 3'-end processing 43
                mRNA alternative polyadenylation 6
                  positive regulation of mRNA alternative polyadenylation 0
                  regulation of mRNA alternative polyadenylation + 0
Path 2
Term Annotations click to browse term
  biological_process 15971
    metabolic process 9633
      organic substance metabolic process 9208
        organic cyclic compound metabolic process 5208
          nucleobase-containing compound metabolic process 4758
            nucleic acid metabolic process 4278
              RNA metabolic process 3755
                RNA processing 839
                  mRNA processing 392
                    mRNA 3'-end processing 43
                      mRNA alternative polyadenylation 6
                        positive regulation of mRNA alternative polyadenylation 0
                        regulation of mRNA alternative polyadenylation + 0
paths to the root