Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:synaptic vesicle transport along microtubule
go back to main search page
Accession:GO:0099517 term browser browse the term
Definition:The directed movement of synaptic vesicles along microtubules within a cell, powered by molecular motors.


show annotations for term's descendants           Sort by:
anterograde synaptic vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AP3B1 adaptor related protein complex 3 subunit beta 1 involved_in ISS
IEA
IBA		 UniProt
Ensembl
TreeGrafter
GO_Central		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:28,481,974...28,748,095
Ensembl chr 3:28,481,038...28,751,258 		JBrowse link
G AP3B2 adaptor related protein complex 3 subunit beta 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:54,509,753...54,539,520
Ensembl chr 3:54,508,627...54,539,505 		JBrowse link
G AP3D1 adaptor related protein complex 3 subunit delta 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr20:56,893,479...56,932,460
Ensembl chr20:56,893,535...56,931,830 		JBrowse link
G AP3M1 adaptor related protein complex 3 subunit mu 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:24,521,655...24,540,232
Ensembl chr 4:24,516,758...24,540,232 		JBrowse link
G AP3M2 adaptor related protein complex 3 subunit mu 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:23,500,988...23,518,193
Ensembl chr16:23,454,325...23,518,193 		JBrowse link
G AP3S1 adaptor related protein complex 3 subunit sigma 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:5,543,140...5,611,322
Ensembl chr11:5,543,222...5,610,930 		JBrowse link
G AP3S2 adaptor related protein complex 3 subunit sigma 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:52,807,462...52,865,290
Ensembl chr 3:52,807,462...52,865,245 		JBrowse link
G BLOC1S1 biogenesis of lysosomal organelles complex 1 subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:116,993...120,244 JBrowse link
G BLOC1S2 biogenesis of lysosomal organelles complex 1 subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:13,040,016...13,044,364
Ensembl chr28:13,040,573...13,044,323 		JBrowse link
G BLOC1S3 biogenesis of lysosomal organelles complex 1 subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:110,325,351...110,328,226
Ensembl chr 1:110,326,843...110,327,442 		JBrowse link
G BLOC1S4 biogenesis of lysosomal organelles complex 1 subunit 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:58,822,405...58,823,770
Ensembl chr 3:58,822,482...58,823,138 		JBrowse link
G BLOC1S5 biogenesis of lysosomal organelles complex 1 subunit 5 involved_in ISO (MGI:5437407|PMID:21998198) UniProt PMID:21998198 MGI:5437407 NCBI chr35:7,860,336...7,998,461
Ensembl chr35:7,955,923...7,998,505 		JBrowse link
G BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 involved_in ISO (MGI:5437407|PMID:21998198) UniProt PMID:21998198 MGI:5437407 NCBI chr30:11,861,119...11,949,451
Ensembl chr30:11,811,339...11,937,353 		JBrowse link
G DTNBP1 dystrobrevin binding protein 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr35:14,738,025...14,862,609
Ensembl chr35:14,738,029...14,864,169 		JBrowse link
G KIF1A kinesin family member 1A involved_in ISO (PMID:7539720) SynGO PMID:7539720 NCBI chr25:50,855,703...50,945,014
Ensembl chr25:50,858,698...50,944,964 		JBrowse link
G MADD MAP kinase activating death domain involved_in ISO (PMID:18849981) SynGO PMID:18849981 NCBI chr18:42,290,226...42,332,237
Ensembl chr18:42,290,754...42,328,586 		JBrowse link
G SNAPIN SNAP associated protein involved_in ISO (MGI:5437407|PMID:21998198) UniProt PMID:21998198 MGI:5437407 NCBI chr 7:43,410,554...43,411,929
Ensembl chr 7:43,410,998...43,412,323 		JBrowse link
G TRIM46 tripartite motif containing 46 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26671463) Ensembl
TreeGrafter
MGI		 PMID:26671463 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:42,345,506...42,354,667
Ensembl chr 7:42,345,523...42,354,557 		JBrowse link
G TRIM55 tripartite motif containing 55 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr29:15,786,423...15,831,059
Ensembl chr29:15,786,433...15,830,402 		JBrowse link
negative regulation of anterograde synaptic vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNIH2 cornichon family AMPA receptor auxiliary protein 2 involved_in ISO PMID:24094107 UniProt PMID:24094107 RGD:10400859 NCBI chr18:51,020,263...51,026,280
Ensembl chr18:51,021,116...51,026,273 		JBrowse link
positive regulation of anterograde synaptic vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BORCS5 BLOC-1 related complex subunit 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr27:33,839,345...33,949,056
Ensembl chr27:33,837,318...33,934,896 		JBrowse link
G MAP2 microtubule associated protein 2 involved_in ISO PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr37:17,316,899...17,611,360
Ensembl chr37:17,466,678...17,607,803 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17925
    cellular process 16926
      synaptic vesicle transport 45
        synaptic vesicle cytoskeletal transport 22
          synaptic vesicle transport along microtubule 22
            anterograde synaptic vesicle transport + 22
            retrograde synaptic vesicle transport 0
Path 2
Term Annotations click to browse term
  biological_process 17925
    localization 5616
      establishment of localization 4910
        establishment of localization in cell 2172
          intracellular transport 1421
            cytoskeleton-dependent intracellular transport 220
              transport along microtubule 186
                organelle transport along microtubule 86
                  vesicle transport along microtubule 48
                    synaptic vesicle transport along microtubule 22
                      anterograde synaptic vesicle transport + 22
                      retrograde synaptic vesicle transport 0
paths to the root