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ONTOLOGY REPORT - ANNOTATIONS

Term:nBAF complex
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Accession:GO:0071565 term browser browse the term
Definition:A SWI/SNF-type complex that is found in post-mitotic neurons, and in human contains actin and proteins encoded by the ARID1A/BAF250A or ARID1B/BAF250B, SMARCD1/BAF60A, SMARCD3/BAF60C, SMARCA2/BRM/BAF190B, SMARCA4/BRG1/BAF190A, SMARCB1/BAF47, SMARCC1/BAF155, SMARCE1/BAF57, SMARCC2/BAF170, DPF1/BAF45B, DPF3/BAF45C, ACTL6B/BAF53B genes. The nBAF complex along with CREST plays a role regulating the activity of genes essential for dendrite growth.


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nBAF complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actl6b actin-like 6B part_of ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:3775125|PMID:17640523), (PMID:23785148)		 UniProt
Ensembl
RGD		 PMID:17640523 PMID:23785148 GO_REF:0000024 GO_REF:0000107 MGI:3775125 NCBI chr12:19,124,887...19,141,419
Ensembl chr12:19,124,916...19,141,376 		JBrowse link
G Arid1a AT-rich interaction domain 1A part_of ISO
IBA		 (MGI:3775125|PMID:17640523)
GO_REF:0000033		 RGD
GO_Central		 PMID:17640523 GO_REF:0000033 MGI:3775125 NCBI chr 5:145,908,173...145,981,552
Ensembl chr 5:145,908,181...145,985,564 		JBrowse link
G Arid1b AT-rich interaction domain 1B part_of IBA
ISO		 GO_REF:0000033
(PMID:23785148)		 GO_Central
RGD		 PMID:23785148 GO_REF:0000033 NCBI chr 1:45,567,991...45,923,644
Ensembl chr 1:45,563,623...45,923,493 		JBrowse link
G Dpf1 double PHD fingers 1 part_of ISS
ISO		 GO_REF:0000024
(MGI:3775125|PMID:17640523), (PMID:23785148)		 UniProt
RGD		 PMID:17640523 PMID:23785148 GO_REF:0000024 MGI:3775125 NCBI chr 1:84,602,212...84,615,954
Ensembl chr 1:84,602,336...84,615,950 		JBrowse link
G Dpf2 double PHD fingers 2 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:203,183,674...203,199,037
Ensembl chr 1:203,183,686...203,198,983 		JBrowse link
G Dpf3 double PHD fingers 3 part_of ISO (MGI:3775125|PMID:17640523), (PMID:23785148) RGD PMID:17640523 PMID:23785148 MGI:3775125 NCBI chr 6:102,841,403...103,125,558
Ensembl chr 6:102,846,029...103,125,493 		JBrowse link
G Smarca2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 part_of ISO (MGI:3775125|PMID:17640523), (PMID:23785148) RGD PMID:17640523 PMID:23785148 MGI:3775125 NCBI chr 1:224,191,125...224,358,640
Ensembl chr 1:224,191,125...224,358,684 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 part_of ISS
ISO		 GO_REF:0000024
(MGI:3775125|PMID:17640523), (PMID:23785148)		 UniProt
RGD		 PMID:17640523 PMID:23785148 GO_REF:0000024 MGI:3775125 NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975 		JBrowse link
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 part_of ISO
IBA		 (MGI:3775125|PMID:17640523)
GO_REF:0000033		 RGD
GO_Central		 PMID:17640523 GO_REF:0000033 MGI:3775125 NCBI chr20:12,741,164...12,763,616
Ensembl chr20:12,741,477...12,763,620 		JBrowse link
G Smarcc1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 part_of IBA
ISO		 GO_REF:0000033
(MGI:3775125|PMID:17640523), (PMID:23785148)		 GO_Central
RGD		 PMID:17640523 PMID:23785148 GO_REF:0000033 MGI:3775125 NCBI chr 8:110,111,097...110,214,734
Ensembl chr 8:110,111,122...110,214,720 		JBrowse link
G Smarcc2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 part_of IBA
ISO		 GO_REF:0000033
(MGI:3775125|PMID:17640523), (PMID:23785148)		 GO_Central
RGD		 PMID:17640523 PMID:23785148 GO_REF:0000033 MGI:3775125 NCBI chr 7:881,844...910,090
Ensembl chr 7:881,421...909,978 		JBrowse link
G Smarcd1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 part_of ISO (MGI:3775125|PMID:17640523) RGD PMID:17640523 MGI:3775125 NCBI chr 7:130,829,783...130,840,323
Ensembl chr 7:130,829,768...130,840,323 		JBrowse link
G Smarcd3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 part_of ISO (MGI:3775125|PMID:17640523), (PMID:23785148) RGD PMID:17640523 PMID:23785148 MGI:3775125 NCBI chr 4:10,548,693...10,580,334
Ensembl chr 4:10,548,751...10,580,326 		JBrowse link
G Smarce1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 part_of ISO (MGI:3775125|PMID:17640523) RGD PMID:17640523 MGI:3775125 NCBI chr10:84,159,270...84,180,547
Ensembl chr10:84,159,275...84,179,989 		JBrowse link
G Ss18l1 SS18L1 subunit of BAF chromatin remodeling complex part_of IEA
ISO		 GO_REF:0000107
(PMID:23785148)		 Ensembl
RGD		 PMID:23785148 GO_REF:0000107 NCBI chr 3:167,143,730...167,165,253
Ensembl chr 3:167,143,994...167,165,253 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20624
    protein-containing complex 6602
      nuclear protein-containing complex 1276
        SWI/SNF superfamily-type complex 94
          nBAF complex 15
Path 2
Term Annotations click to browse term
  cellular_component 20624
    cellular anatomical entity 20386
      organelle 13799
        non-membrane-bounded organelle 5216
          intracellular non-membrane-bounded organelle 5214
            chromosome 1369
              chromatin 811
                SWI/SNF superfamily-type complex 94
                  nBAF complex 15
paths to the root