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ONTOLOGY REPORT - ANNOTATIONS

Term:intestinal epithelial cell differentiation
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Accession:GO:0060575 term browser browse the term
Definition:The process in which a relatively unspecialized cell acquires specialized features of a columnar/cuboidal epithelial cell of the intestine.

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intestinal epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbfa2t2 CBFA2/RUNX1 partner transcriptional co-repressor 2 involved_in ISO (PMID:25398765) UniProt PMID:25398765 NCBI chrNW_004624842:5,637,266...5,772,263
Ensembl chrNW_004624842:5,641,589...5,772,323 		JBrowse link
G Cdx2 caudal type homeobox 2 involved_in ISO (PMID:22015720) UniProt PMID:22015720 NCBI chrNW_004624776:10,551,503...10,556,987
Ensembl chrNW_004624776:10,551,503...10,556,845 		JBrowse link
G Gata4 GATA binding protein 4 acts_upstream_of_or_within ISO (PMID:9566909) MGI PMID:9566909 NCBI chrNW_004624758:25,278,878...25,319,317
Ensembl chrNW_004624758:25,278,874...25,319,318 		JBrowse link
G Gata5 GATA binding protein 5 acts_upstream_of_or_within ISO (PMID:9566909) MGI PMID:9566909 NCBI chrNW_004624741:28,310,679...28,322,209
Ensembl chrNW_004624741:28,310,201...28,321,095 		JBrowse link
G Gata6 GATA binding protein 6 acts_upstream_of_or_within ISO (PMID:9566909) MGI PMID:9566909 NCBI chrNW_004624770:9,772,818...9,799,837
Ensembl chrNW_004624770:9,772,818...9,798,259 		JBrowse link
G Ptk6 protein tyrosine kinase 6 involved_in ISO (PMID:16782882) UniProt PMID:16782882 NCBI chrNW_004624741:29,183,992...29,192,091
Ensembl chrNW_004624741:29,185,300...29,191,863 		JBrowse link
G Sav1 salvador family WW domain containing protein 1 acts_upstream_of_or_within ISO (PMID:18369314) MGI PMID:18369314 NCBI chrNW_004624731:18,262,110...18,282,386 JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of ISO (PMID:17681175) MGI PMID:17681175 NCBI chrNW_004624801:2,296,353...2,300,853
Ensembl chrNW_004624801:2,296,168...2,301,596 		JBrowse link
G Yap1 Yes1 associated transcriptional regulator acts_upstream_of ISO (PMID:17980593) MGI PMID:17980593 NCBI chrNW_004624878:621,214...776,363 JBrowse link
enterocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Yap1 Yes1 associated transcriptional regulator acts_upstream_of ISO (PMID:17980593) MGI PMID:17980593 NCBI chrNW_004624878:621,214...776,363 JBrowse link
intestinal epithelial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1galt1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 acts_upstream_of_or_within ISO (PMID:21383503) MGI PMID:21383503 NCBI chrNW_004624813:4,795,542...4,832,056 JBrowse link
G Cdh1 cadherin 1 acts_upstream_of_or_within ISO (PMID:22766025) MGI PMID:22766025 NCBI chrNW_004624746:17,480,472...17,557,722
Ensembl chrNW_004624746:17,483,469...17,557,581 		JBrowse link
G Dicer1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (PMID:21307095) MGI PMID:21307095 NCBI chrNW_004624734:7,604,049...7,681,481
Ensembl chrNW_004624734:7,608,273...7,651,819 		JBrowse link
G Gsdmc gasdermin C involved_in ISO (PMID:17350798) UniProt PMID:17350798 NCBI chrNW_004624735:25,913,246...25,955,621 JBrowse link
G Il6st interleukin 6 cytokine family signal transducer involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624759:3,258,324...3,315,265
Ensembl chrNW_004624759:3,276,741...3,312,601 		JBrowse link
G Klf5 KLF transcription factor 5 acts_upstream_of_or_within ISO (PMID:23266329) MGI PMID:23266329 NCBI chrNW_004624751:27,488,434...27,509,871
Ensembl chrNW_004624751:27,489,535...27,505,494 		JBrowse link
G Nkx3-2 NK3 homeobox 2 acts_upstream_of_or_within ISO (PMID:21307095) MGI PMID:21307095 NCBI chrNW_004624755:18,070,706...18,073,847
Ensembl chrNW_004624755:18,070,740...18,072,883 		JBrowse link
G Prdm1 PR/SET domain 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21670299) Ensembl
MGI		 PMID:21670299 GO_REF:0000107 NCBI chrNW_004624780:16,205,056...16,227,382
Ensembl chrNW_004624780:16,204,838...16,227,390 		JBrowse link
G Spdef SAM pointed domain containing ETS transcription factor acts_upstream_of_or_within ISO (PMID:19549527) MGI PMID:19549527 NCBI chrNW_004624754:22,714,181...22,721,113
Ensembl chrNW_004624754:22,714,432...22,720,504 		JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase involved_in ISO (PMID:25731159) UniProt PMID:25731159 NCBI chrNW_004624842:2,212,561...2,260,514
Ensembl chrNW_004624842:2,211,020...2,230,132 		JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase acts_upstream_of_or_within ISO (PMID:23726973) MGI PMID:23726973 NCBI chrNW_004624860:1,416,419...1,455,953
Ensembl chrNW_004624860:1,417,131...1,457,717 		JBrowse link
G Yap1 Yes1 associated transcriptional regulator involved_in ISO (PMID:25731159) UniProt PMID:25731159 NCBI chrNW_004624878:621,214...776,363 JBrowse link
G Yipf6 Yip1 domain family member 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22802641) Ensembl
MGI		 PMID:22802641 GO_REF:0000107 NCBI chrNW_004624891:1,802,679...1,832,450
Ensembl chrNW_004624891:1,802,679...1,838,666 		JBrowse link
intestinal epithelial cell maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdkn1a cyclin dependent kinase inhibitor 1A ISO RGD PMID:20466941 RGD:8662316 NCBI chrNW_004624754:21,109,074...21,115,869
Ensembl chrNW_004624754:21,108,874...21,115,885 		JBrowse link
G Fzd5 frizzled class receptor 5 acts_upstream_of_or_within ISO (PMID:15778706) MGI PMID:15778706 NCBI chrNW_004624765:8,222,193...8,228,530
Ensembl chrNW_004624765:8,222,237...8,228,050 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20808783) Ensembl
MGI		 PMID:20808783 GO_REF:0000107 NCBI chrNW_004624734:39,414,458...39,471,705
Ensembl chrNW_004624734:39,411,824...39,471,705 		JBrowse link
G Hoxa5 homeobox A5 acts_upstream_of_or_within ISO (PMID:10564089) MGI PMID:10564089 NCBI chrNW_004624739:3,461,779...3,464,543
Ensembl chrNW_004624739:3,461,800...3,464,785 		JBrowse link
G Tmigd1 transmembrane and immunoglobulin domain containing 1 acts_upstream_of_or_within ISO (PMID:33129760) MGI PMID:33129760 NCBI chrNW_004624786:2,787,236...2,802,483
Ensembl chrNW_004624786:2,774,480...2,802,483 		JBrowse link
G Tyms thymidylate synthetase ISO RGD PMID:1260861 RGD:2317427 NCBI chrNW_004624770:11,138,673...11,149,600
Ensembl chrNW_004624770:11,138,652...11,149,600 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15172
    developmental process 6226
      anatomical structure development 5855
        tube development 1175
          digestive tract development 160
            intestinal epithelial cell differentiation 27
              enterocyte differentiation 1
              interstitial cell of Cajal differentiation 0
              intestinal epithelial cell development + 19
Path 2
Term Annotations click to browse term
  biological_process 15172
    developmental process 6226
      anatomical structure development 5855
        tissue development 2079
          epithelium development 1294
            epithelial cell differentiation 742
              columnar/cuboidal epithelial cell differentiation 145
                intestinal epithelial cell differentiation 27
                  enterocyte differentiation 1
                  interstitial cell of Cajal differentiation 0
                  intestinal epithelial cell development + 19
paths to the root