Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:epithelial cell differentiation
go back to main search page
Accession:GO:0030855 term browser browse the term
Definition:The process in which a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium.



show annotations for term's descendants           Sort by:
epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadvl acyl-CoA dehydrogenase, very long chain involved_in ISO
IEA
(PMID:21492153)
GO_REF:0000107
RGD
Ensembl
PMID:21492153 GO_REF:0000107 NCBI chr10:54,732,875...54,738,102
Ensembl chr10:54,732,469...54,738,075
JBrowse link
G Akr1c1 aldo-keto reductase family 1, member C1 involved_in ISO (PMID:21492153) RGD PMID:21492153 NCBI chr17:65,810,474...65,837,385
Ensembl chr17:65,810,475...65,837,326
JBrowse link
G Akr1c2 aldo-keto reductase family 1, member C2 involved_in ISO (PMID:21492153) RGD PMID:21492153 NCBI chr17:65,759,778...65,808,013
Ensembl chr17:65,759,788...65,775,764
JBrowse link
G Aldoc aldolase, fructose-bisphosphate C involved_in ISO
IEA
(PMID:21492153)
GO_REF:0000107
RGD
Ensembl
PMID:21492153 GO_REF:0000107 NCBI chr10:63,217,477...63,221,066
Ensembl chr10:63,217,451...63,221,066
JBrowse link
G Anxa4 annexin A4 involved_in ISO
IEA
(PMID:21492153)
GO_REF:0000107
RGD
Ensembl
PMID:21492153 GO_REF:0000107 NCBI chr 4:119,184,378...119,241,183
Ensembl chr 4:119,184,374...119,241,161
JBrowse link
G Anxa7 annexin A7 involved_in ISO (PMID:21492153) RGD PMID:21492153 NCBI chr15:3,821,798...3,849,659
Ensembl chr15:3,821,845...3,849,385
JBrowse link
G Bdh2 3-hydroxybutyrate dehydrogenase 2 involved_in ISO
IEA
(PMID:21492153)
GO_REF:0000107
RGD
Ensembl
PMID:21492153 GO_REF:0000107 NCBI chr 2:223,702,410...223,723,076
Ensembl chr 2:223,702,412...223,723,072
JBrowse link
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within ISO MGI:2136986 (PMID:17878916) RGD PMID:17878916 NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788
JBrowse link
G Casp6 caspase 6 involved_in ISO
IEA
(PMID:21492153)
GO_REF:0000107
RGD
Ensembl
PMID:21492153 GO_REF:0000107 NCBI chr 2:218,466,063...218,478,503
Ensembl chr 2:218,466,076...218,478,502
JBrowse link
G Cbfa2t2 CBFA2/RUNX1 partner transcriptional co-repressor 2 acts_upstream_of_or_within ISO MGI:3607923 (PMID:16227606) RGD PMID:16227606 NCBI chr 3:142,936,945...143,043,205
Ensembl chr 3:142,936,985...143,043,197
JBrowse link
G Cbr1 carbonyl reductase 1 involved_in ISO (PMID:21492153) RGD PMID:21492153 NCBI chr11:32,860,571...32,862,981
Ensembl chr11:32,908,950...32,911,393
Ensembl chr11:32,908,950...32,911,393
JBrowse link
G Cd63 Cd63 molecule IMP RGD PMID:10488139 RGD:2313433 NCBI chr 7:1,325,108...1,340,447
Ensembl chr 7:1,325,103...1,399,178
JBrowse link
G Cdhr2 cadherin-related family member 2 involved_in ISO (PMID:12117771) RGD PMID:12117771 NCBI chr17:9,876,853...9,913,356
Ensembl chr17:9,876,860...9,912,575
JBrowse link
G Cdk1 cyclin-dependent kinase 1 involved_in ISO (PMID:21492153) RGD PMID:21492153 NCBI chr20:19,266,226...19,281,417
Ensembl chr20:19,266,248...19,281,408
JBrowse link
G Ces1d carboxylesterase 1D involved_in ISO (PMID:21492153) RGD PMID:21492153 NCBI chr19:13,873,490...13,912,035
Ensembl chr19:13,796,623...13,912,035
JBrowse link
G Cnn3 calponin 3 involved_in ISO (PMID:21492153) RGD PMID:21492153 NCBI chr 2:209,518,948...209,550,107
Ensembl chr 2:209,518,948...209,550,104
JBrowse link
G Col4a1 collagen type IV alpha 1 chain IEP RGD PMID:8635488 RGD:2311343 NCBI chr16:78,183,533...78,294,412
Ensembl chr16:78,183,533...78,294,412
JBrowse link
G Cpt1a carnitine palmitoyltransferase 1A involved_in ISO (PMID:21492153) RGD PMID:21492153 NCBI chr 1:200,564,634...200,627,059
Ensembl chr 1:200,565,613...200,627,055
JBrowse link
G Crhr1 corticotropin releasing hormone receptor 1 IMP RGD PMID:20551459 RGD:5130947 NCBI chr10:89,040,186...89,083,481
Ensembl chr10:89,040,203...89,083,481
JBrowse link
G Crhr2 corticotropin releasing hormone receptor 2 IMP RGD PMID:20551459 RGD:5130947 NCBI chr 4:84,222,897...84,265,924
Ensembl chr 4:84,224,002...84,265,904
JBrowse link
G Ctsb cathepsin B involved_in ISO
IEA
(PMID:21492153)
GO_REF:0000107
RGD
Ensembl
PMID:21492153 GO_REF:0000107 NCBI chr15:37,389,636...37,410,508
Ensembl chr15:37,389,629...37,410,500
JBrowse link
G Dlx3 distal-less homeobox 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:80,064,489...80,069,891
Ensembl chr10:80,064,489...80,069,872
JBrowse link
G Dlx5 distal-less homeobox 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:101927 (PMID:17878916)
Ensembl
RGD
PMID:17878916 GO_REF:0000107 NCBI chr 4:34,999,139...35,003,504
Ensembl chr 4:34,999,139...35,003,407
JBrowse link
G Dlx6 distal-less homeobox 6 acts_upstream_of_or_within ISO MGI:101926 (PMID:17878916) RGD PMID:17878916 NCBI chr 4:34,984,264...34,989,926
Ensembl chr 4:34,984,232...34,991,343
JBrowse link
G Dnph1 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 involved_in ISO (PMID:21492153) RGD PMID:21492153 NCBI chr 9:14,481,296...14,484,034
Ensembl chr 9:14,481,066...14,484,022
JBrowse link
G Ehf ets homologous factor involved_in ISO (PMID:10644770) RGD PMID:10644770 NCBI chr 3:89,639,845...89,680,061
Ensembl chr 3:89,641,833...89,679,997
JBrowse link
G Ezr ezrin IEP RGD PMID:7640303 RGD:729995 NCBI chr 1:46,967,961...47,011,505
Ensembl chr 1:46,967,658...47,011,505
JBrowse link
G F11r F11 receptor acts_upstream_of_or_within ISO (PMID:15494378) RGD PMID:15494378 NCBI chr13:83,873,797...83,897,388
Ensembl chr13:83,873,797...83,897,402
JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:1927833 (PMID:16618415)
(PMID:14604677)
RGD PMID:14604677 PMID:16618415 NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:2153811 (PMID:16618415) RGD PMID:16618415 NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626
JBrowse link
G Fn3k fructosamine 3 kinase involved_in ISO (PMID:21492153) RGD PMID:21492153 NCBI chr10:106,700,670...106,715,903
Ensembl chr10:106,700,670...106,715,895
JBrowse link
G Gata6 GATA binding protein 6 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:16887115)
GO_Central
RGD
PMID:16887115 GO_REF:0000033 NCBI chr18:2,188,121...2,219,532
Ensembl chr18:2,188,121...2,219,532
JBrowse link
G Gdf7 growth differentiation factor 7 acts_upstream_of_or_within ISO MGI:2387817 (PMID:11356025) RGD PMID:11356025 NCBI chr 6:31,171,495...31,182,484
Ensembl chr 6:31,178,119...31,182,447
JBrowse link
G Gsta1 glutathione S-transferase alpha 1 involved_in ISO (PMID:21492153) RGD PMID:21492153 NCBI chr 9:23,703,476...23,720,121
Ensembl chr 9:23,703,477...23,720,121
JBrowse link
G Gsta2 glutathione S-transferase alpha 2 involved_in ISO (PMID:21492153) RGD PMID:21492153 NCBI chr 8:79,184,535...79,196,827
Ensembl chr 8:79,184,322...79,196,798
JBrowse link
G Gstk1 glutathione S-transferase kappa 1 involved_in ISO (PMID:21492153) RGD PMID:21492153 NCBI chr 4:71,118,979...71,123,298
Ensembl chr 4:71,118,896...71,123,292
JBrowse link
G Hnrnph3 heterogeneous nuclear ribonucleoprotein H3 involved_in ISO (PMID:21492153) RGD PMID:21492153 NCBI chr20:25,616,400...25,625,814
Ensembl chr20:25,614,733...25,625,750
JBrowse link
G Id3 inhibitor of DNA binding 3 acts_upstream_of_or_within ISO (PMID:16407553) RGD PMID:16407553 NCBI chr 5:148,372,784...148,374,353
Ensembl chr 5:148,372,762...148,374,349
JBrowse link
G Ka11 type I keratin KA11 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:85,161,424...85,164,737
Ensembl chr10:85,066,802...85,171,799
JBrowse link
G Krt10 keratin 10 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:84,338,695...84,343,279
Ensembl chr10:84,338,706...84,343,701
JBrowse link
G Krt12 keratin 12 involved_in IBA
IEA
GO_REF:0000033
GO_REF:0000118
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr10:84,370,803...84,378,103
Ensembl chr10:84,370,883...84,378,045
JBrowse link
G Krt13 keratin 13 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:85,051,887...85,056,099
Ensembl chr10:85,051,889...85,056,084
JBrowse link
G Krt14 keratin 14 involved_in IDA
IBA
PMID:8950218
GO_REF:0000033
GO_Central PMID:8950218 GO_REF:0000033, RGD:633113 NCBI chr10:85,137,786...85,142,054
Ensembl chr10:85,066,802...85,171,799
JBrowse link
G Krt15 keratin 15 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:85,066,797...85,070,614
Ensembl chr10:85,066,802...85,171,799
JBrowse link
G Krt16 keratin 16 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:85,168,357...85,171,816
Ensembl chr10:85,066,802...85,171,799
JBrowse link
G Krt17 keratin 17 involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr10:85,178,673...85,183,392
Ensembl chr10:85,178,675...85,183,392
JBrowse link
G Krt19 keratin 19 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:85,075,835...85,080,552
Ensembl chr10:85,066,802...85,171,799
JBrowse link
G Krt20 keratin 20 involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr10:84,384,790...84,394,125
Ensembl chr10:84,384,802...84,394,107
JBrowse link
G Krt23 keratin 23 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:84,434,445...84,450,773
Ensembl chr10:84,434,380...84,450,983
JBrowse link
G Krt24 keratin 24 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:84,232,163...84,237,299
Ensembl chr10:84,232,164...84,237,299
JBrowse link
G Krt25 keratin 25 involved_in IBA
IEA
GO_REF:0000033
GO_REF:0000118
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr10:84,267,399...84,275,025
Ensembl chr10:84,267,399...84,274,965
JBrowse link
G Krt26 keratin 26 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:84,280,965...84,295,575
Ensembl chr10:84,281,162...84,292,466
JBrowse link
G Krt27 keratin 27 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:84,298,684...84,303,967
Ensembl chr10:84,298,508...84,303,967
JBrowse link
G Krt28 keratin 28 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:84,318,352...84,328,693
Ensembl chr10:84,318,543...84,328,643
JBrowse link
G Krt31 keratin 31 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:84,979,393...84,982,898
Ensembl chr10:84,979,352...84,982,832
JBrowse link
G Krt32 keratin 32 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:85,013,551...85,020,578
Ensembl chr10:85,013,554...85,020,534
JBrowse link
G Krt33a keratin 33A involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr10:84,942,584...84,947,544
Ensembl chr10:84,942,573...84,947,478
JBrowse link
G Krt33b keratin 33B involved_in IBA
IEA
GO_REF:0000033
GO_REF:0000118
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr10:84,955,838...84,961,673
Ensembl chr10:84,955,841...84,961,673
JBrowse link
G Krt34 keratin 34 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:84,969,988...84,974,098
Ensembl chr10:84,970,017...84,974,040
JBrowse link
G Krt35 keratin 35 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:85,026,171...85,029,568
Ensembl chr10:85,026,171...85,029,568
JBrowse link
G Krt36 keratin 36 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:85,036,379...85,040,003
Ensembl chr10:85,036,594...85,039,959
JBrowse link
G Krt39 keratin 39 involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr10:84,473,946...84,480,552
Ensembl chr10:84,473,946...84,480,552
JBrowse link
G Krt4 keratin 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:1278069|PMID:9727004)
UniProt
RGD
PMID:9727004 GO_REF:0000024 MGI:1278069 NCBI chr 7:133,046,067...133,052,027
Ensembl chr 7:133,046,515...133,052,019
JBrowse link
G Krt40 keratin 40 involved_in IBA
IEA
GO_REF:0000033
GO_REF:0000118
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr10:84,496,470...84,502,756
Ensembl chr10:84,496,730...84,502,751
JBrowse link
G Krt42 keratin 42 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:85,185,186...85,246,520
Ensembl chr10:85,185,181...85,192,595
JBrowse link
G Krt9 keratin 9 involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr10:85,120,962...85,127,228
Ensembl chr10:85,122,424...85,127,228
JBrowse link
G Lgals3 galectin 3 involved_in ISO
IEA
(PMID:21492153)
GO_REF:0000107
RGD
Ensembl
PMID:21492153 GO_REF:0000107 NCBI chr15:20,620,083...20,632,019
Ensembl chr15:20,607,692...20,632,025
JBrowse link
G Msi1 musashi RNA-binding protein 1 IEP RGD PMID:16360154 RGD:1582662 NCBI chr12:41,158,301...41,251,134
Ensembl chr12:41,158,599...41,191,076
JBrowse link
G Muc1 mucin 1, cell surface associated IEP RGD PMID:8967520 RGD:633461 NCBI chr 2:174,635,989...174,640,738
Ensembl chr 2:174,635,995...174,640,733
JBrowse link
G Muc5ac mucin 5AC, oligomeric mucus/gel-forming IEP RGD PMID:8967520 RGD:633461 NCBI chr 1:196,864,336...196,896,475
Ensembl chr 1:196,864,336...196,896,475
JBrowse link
G Neurog3 neurogenin 3 acts_upstream_of_or_within ISO MGI:2651394 (PMID:12080087) RGD PMID:12080087 NCBI chr20:30,079,780...30,081,262
Ensembl chr20:30,079,780...30,081,262
JBrowse link
G Nkx2-5 NK2 homeobox 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:97351 (PMID:11390666)
Ensembl
RGD
PMID:11390666 GO_REF:0000107 NCBI chr10:16,340,428...16,347,004
Ensembl chr10:16,344,159...16,346,934
JBrowse link
G Nkx2-6 NK2 homeobox 6 acts_upstream_of_or_within ISO MGI:97350 (PMID:11390666) RGD PMID:11390666 NCBI chr15:44,443,151...44,447,248
Ensembl chr15:44,443,101...44,447,247
JBrowse link
G Nrbp1 nuclear receptor binding protein 1 involved_in ISO (MGI:5426079|PMID:22510880) RGD PMID:22510880 MGI:5426079 NCBI chr 6:25,122,635...25,133,209
Ensembl chr 6:25,122,635...25,133,182
JBrowse link
G Pax8 paired box 8 acts_upstream_of_or_within ISO MGI:2156985 (PMID:9590297) RGD PMID:9590297 NCBI chr 3:7,185,721...7,242,363
Ensembl chr 3:7,185,723...7,242,363
JBrowse link
G Pcna proliferating cell nuclear antigen involved_in ISO (PMID:21492153) RGD PMID:21492153 NCBI chr 3:119,499,039...119,502,911
Ensembl chr 3:119,498,810...119,502,995
JBrowse link
G Pgk1 phosphoglycerate kinase 1 involved_in ISO (PMID:21492153) RGD PMID:21492153 NCBI chr  X:71,271,454...71,287,429
Ensembl chr  X:71,271,440...71,287,418
JBrowse link
G Pih1d1 PIH1 domain containing 1 involved_in ISO (PMID:21492153) RGD PMID:21492153 NCBI chr 1:95,639,597...95,645,295
Ensembl chr 1:95,639,592...95,645,290
JBrowse link
G Plec plectin IEP RGD PMID:8686756 RGD:1599918 NCBI chr 7:107,887,764...107,949,100
Ensembl chr 7:107,887,764...107,945,467
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma acts_upstream_of_or_within ISO MGI:102784 (PMID:15687259) RGD PMID:15687259 NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468
JBrowse link
G Pter phosphotriesterase related involved_in ISO
IEA
(PMID:21492153)
GO_REF:0000107
RGD
Ensembl
PMID:21492153 GO_REF:0000107 NCBI chr17:76,058,388...76,119,633
Ensembl chr17:76,058,503...76,119,627
JBrowse link
G Rpsa ribosomal protein SA IEP RGD PMID:8076763 RGD:633045 NCBI chr 8:119,851,225...119,855,103
Ensembl chr 8:119,851,225...119,855,247
JBrowse link
G Six1 SIX homeobox 1 acts_upstream_of_or_within ISO MGI:2655195 (PMID:16530750) RGD PMID:16530750 NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975
JBrowse link
G Six2 SIX homeobox 2 acts_upstream_of ISO MGI:3691857 (PMID:17036046) RGD PMID:17036046 NCBI chr 6:8,974,859...8,981,345
Ensembl chr 6:8,967,157...8,981,193
JBrowse link
G Slc9a2 solute carrier family 9 member A2 involved_in ISO (MGI:7434531|PMID:34985202) RGD PMID:34985202 MGI:7434531 NCBI chr 9:42,932,001...43,014,447
Ensembl chr 9:42,931,346...43,014,444
JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of ISO MGI:1934268|MGI:2445832 (PMID:17199044) RGD PMID:17199044 NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829
JBrowse link
G Stx2 syntaxin 2 IMP RGD PMID:12464668 RGD:1298909 NCBI chr12:27,678,744...27,714,751
Ensembl chr12:27,689,819...27,714,751
JBrowse link
G Sult1b1 sulfotransferase family 1B member 1 involved_in ISO (PMID:21492153) RGD PMID:21492153 NCBI chr14:20,492,763...20,505,491
Ensembl chr14:20,492,708...20,505,483
JBrowse link
G Tagln transgelin involved_in ISO
IEA
(PMID:21492153)
GO_REF:0000107
RGD
Ensembl
PMID:21492153 GO_REF:0000107 NCBI chr 8:46,224,939...46,230,413
Ensembl chr 8:46,222,472...46,230,668
JBrowse link
G Tagln2 transgelin 2 involved_in ISO
IEA
(PMID:21492153)
GO_REF:0000107
RGD
Ensembl
PMID:21492153 GO_REF:0000107 NCBI chr13:84,966,980...84,973,973
Ensembl chr13:84,967,009...84,973,972
JBrowse link
G Tbx1 T-box transcription factor 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380
JBrowse link
G Tcf21 transcription factor 21 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2148207 (PMID:10572052)
UniProt
RGD
PMID:10572052 GO_REF:0000024 NCBI chr 1:22,701,353...22,704,212
Ensembl chr 1:22,701,353...22,704,202
JBrowse link
G Tfap2c transcription factor AP-2 gamma acts_upstream_of_or_within ISO MGI:3040993 (PMID:11940672) RGD PMID:11940672 NCBI chr 3:161,315,114...161,322,998
Ensembl chr 3:161,315,031...161,322,995
JBrowse link
G Tgfb1i1 transforming growth factor beta 1 induced transcript 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:97747 (PMID:15687259)
Ensembl
RGD
PMID:15687259 GO_REF:0000107 NCBI chr 1:182,828,553...182,835,465
Ensembl chr 1:182,828,544...182,837,080
JBrowse link
G Tgfb2 transforming growth factor, beta 2 acts_upstream_of ISS
ISO
GO_REF:0000024
(PMID:18358889)
AgBase
RGD
PMID:18358889 GO_REF:0000024 NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
JBrowse link
G Tollip toll interacting protein involved_in ISO (PMID:21492153) RGD PMID:21492153 NCBI chr 1:196,961,585...196,984,252
Ensembl chr 1:196,950,771...196,983,625
JBrowse link
G Tp63 tumor protein p63 acts_upstream_of_or_within ISO MGI:1861713|MGI:1934269 (PMID:12368184), (PMID:17878916) RGD PMID:12368184 PMID:17878916 NCBI chr11:74,838,858...75,049,764
Ensembl chr11:74,838,859...75,049,398
JBrowse link
G Tpp1 tripeptidyl peptidase 1 involved_in ISO
IEA
(PMID:21492153)
GO_REF:0000107
RGD
Ensembl
PMID:21492153 GO_REF:0000107 NCBI chr 1:160,097,984...160,104,108
Ensembl chr 1:160,096,833...160,104,129
JBrowse link
G Tst thiosulfate sulfurtransferase involved_in ISO
IEA
(PMID:21492153)
GO_REF:0000107
RGD
Ensembl
PMID:21492153 GO_REF:0000107 NCBI chr 7:109,948,061...109,955,378
Ensembl chr 7:109,948,062...109,957,216
JBrowse link
G Upk1a uroplakin 1A involved_in ISO (PMID:10514386) RGD PMID:10514386 NCBI chr 1:85,859,672...85,870,147
Ensembl chr 1:85,859,671...85,870,354
JBrowse link
G Upk1b uroplakin 1B involved_in ISO
IEA
(PMID:10514386)
GO_REF:0000107
RGD
Ensembl
PMID:10514386 GO_REF:0000107 NCBI chr11:61,953,687...61,991,029
Ensembl chr11:61,953,648...61,991,029
JBrowse link
G Upk2 uroplakin 2 involved_in ISO
IBA
(PMID:10514386)
GO_REF:0000033
RGD
GO_Central
PMID:10514386 GO_REF:0000033 NCBI chr 8:44,779,198...44,781,190
Ensembl chr 8:44,779,198...44,781,190
JBrowse link
G Upk3a uroplakin 3A involved_in ISO (PMID:10514386) RGD PMID:10514386 NCBI chr 7:116,128,981...116,139,950
Ensembl chr 7:116,134,874...116,139,948
JBrowse link
G Vdac1 voltage-dependent anion channel 1 involved_in ISO (PMID:21492153) RGD PMID:21492153 NCBI chr10:36,532,306...36,559,642
Ensembl chr10:36,532,244...36,559,640
JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of_or_within ISO MGI:1931048|MGI:2387296 (PMID:16251428) RGD PMID:16251428 NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
JBrowse link
G Vil1 villin 1 involved_in ISO (PMID:21492153) RGD PMID:21492153 NCBI chr 9:75,991,141...76,018,860
Ensembl chr 9:75,991,141...76,018,858
JBrowse link
G Wnt10b Wnt family member 10B acts_upstream_of ISO (PMID:18155657) RGD PMID:18155657 NCBI chr 7:129,922,088...129,927,892
Ensembl chr 7:129,922,088...129,927,892
JBrowse link
G Wnt9a Wnt family member 9A acts_upstream_of ISO MGI:3701350 (PMID:16818445) RGD PMID:16818445 NCBI chr10:44,094,140...44,121,134
Ensembl chr10:44,094,140...44,121,133
JBrowse link
G Wt1 WT1 transcription factor involved_in ISS
ISO
GO_REF:0000024
(MGI:1330701|PMID:9927198)
UniProt
RGD
PMID:9927198 GO_REF:0000024 MGI:1330701 NCBI chr 3:91,566,540...91,613,653
Ensembl chr 3:91,567,001...91,613,643
JBrowse link
acinar cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clcn2 chloride voltage-gated channel 2 acts_upstream_of_or_within ISO MGI:2183262 (PMID:11976342) RGD PMID:11976342 NCBI chr11:80,197,741...80,211,657
Ensembl chr11:80,198,153...80,211,657
JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2148569 (PMID:16192304)
Ensembl
RGD
PMID:16192304 GO_REF:0000107 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Nr5a2 nuclear receptor subfamily 5, group A, member 2 acts_upstream_of_or_within ISO (PMID:25063451) RGD PMID:25063451 NCBI chr13:48,313,634...48,433,494
Ensembl chr13:48,316,301...48,433,326
JBrowse link
G Prox1 prospero homeobox 1 acts_upstream_of_or_within ISO MGI:3609548 (PMID:22178591) RGD PMID:22178591 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183
JBrowse link
G Zfp800 zinc finger protein 800 acts_upstream_of_or_within ISO MGI:6716236 (PMID:33653874) RGD PMID:33653874 NCBI chr 4:56,798,326...56,849,766
Ensembl chr 4:56,826,997...56,849,791
JBrowse link
adrenal chromaffin cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:1857470 (PMID:12361965) RGD PMID:12361965 NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993
JBrowse link
G Insm1 INSM transcriptional repressor 1 involved_in ISO (MGI:3772428|PMID:18094025) RGD PMID:18094025 MGI:3772428 NCBI chr 3:133,640,030...133,642,963
Ensembl chr 3:133,639,580...133,643,003
JBrowse link
ameloblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl5 achaete-scute family bHLH transcription factor 5 involved_in ISO (MGI:6305509|PMID:30504223), (MGI:7280983|PMID:34812512) RGD PMID:30504223 PMID:34812512 MGI:6305509 MGI:7280983 NCBI chr13:47,491,799...47,493,269
Ensembl chr13:47,492,026...47,492,592
JBrowse link
G Bmp2 bone morphogenetic protein 2 involved_in
acts_upstream_of
IEA
ISO
GO_REF:0000107
(PMID:15525533)
Ensembl
RGD
PMID:15525533 GO_REF:0000107 NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of
IEA
ISO
GO_REF:0000107
(PMID:15525533)
Ensembl
RGD
PMID:15525533 GO_REF:0000107 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
JBrowse link
G Bmp7 bone morphogenetic protein 7 acts_upstream_of ISO (PMID:15525533) RGD PMID:15525533 NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788
JBrowse link
G Dspp dentin sialophosphoprotein acts_upstream_of_or_within ISO MGI:2653208 (PMID:25027178) RGD PMID:25027178 NCBI chr14:5,565,562...5,571,669
Ensembl chr14:5,565,629...5,571,672
JBrowse link
G Enam enamelin involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:3796583 (PMID:24603688)
GO_Central
RGD
PMID:24603688 GO_REF:0000033 NCBI chr14:19,556,729...19,581,433
Ensembl chr14:19,556,729...19,581,425
JBrowse link
G Fst follistatin acts_upstream_of ISO MGI:1857467|MGI:88180 (PMID:15525533) RGD PMID:15525533 NCBI chr 2:46,123,260...46,130,584
Ensembl chr 2:46,123,439...46,130,571
JBrowse link
G Tbx1 T-box transcription factor 1 acts_upstream_of_or_within ISO MGI:2179136 (PMID:19233155), (PMID:20816801) RGD PMID:19233155 PMID:20816801 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380
JBrowse link
apical constriction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc88c coiled-coil domain containing 88C involved_in ISO (PMID:30948426) RGD PMID:30948426 NCBI chr 6:120,169,752...120,289,459
Ensembl chr 6:120,169,738...120,289,555
JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within ISO (PMID:20103536) RGD PMID:20103536 NCBI chr13:30,670,792...30,770,213
Ensembl chr13:30,669,764...30,768,360
JBrowse link
G Frmd6 FERM domain containing 6 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:107927|MGI:2135608 (PMID:21685893)
Ensembl
RGD
PMID:21685893 GO_REF:0000107 NCBI chr 6:89,345,983...89,419,579
Ensembl chr 6:89,346,035...89,419,579
JBrowse link
G Pard3 par-3 family cell polarity regulator acts_upstream_of_or_within ISO MGI:107927|MGI:2442579 (PMID:21685893) RGD PMID:21685893 NCBI chr19:55,080,282...55,630,111
Ensembl chr19:55,080,282...55,629,778
JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2135608|MGI:2442579 (PMID:21685893)
Ensembl
RGD
PMID:21685893 GO_REF:0000107 NCBI chr18:1,114,532...1,236,345
Ensembl chr18:1,115,905...1,235,571
JBrowse link
arterial endothelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 involved_in ISO UniProtKB:Q9QUS4 (MGI:3040159|PMID:15107403) RGD PMID:15107403 MGI:3040159 NCBI chr 2:93,096,605...93,100,316
Ensembl chr 2:93,095,498...93,100,312
JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 involved_in ISO UniProtKB:Q9WV93 (MGI:3040159|PMID:15107403) RGD PMID:15107403 MGI:3040159 NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218
JBrowse link
G Notch1 notch receptor 1 involved_in ISO (MGI:3040159|PMID:15107403) RGD PMID:15107403 MGI:3040159 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
JBrowse link
G Tmem100 transmembrane protein 100 acts_upstream_of_or_within ISO MGI:5432904|MGI:5432905 (PMID:22783020) RGD PMID:22783020 NCBI chr10:74,854,779...74,861,147
Ensembl chr10:74,854,468...74,862,941
JBrowse link
arterial endothelial cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rbpj recombination signal binding protein for immunoglobulin kappa J region involved_in ISO (MGI:3056004|PMID:15466160) RGD PMID:15466160 MGI:3056004 NCBI chr14:57,338,493...57,523,330
Ensembl chr14:57,338,507...57,523,353
JBrowse link
auditory receptor cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alg10 ALG10, alpha-1,2-glucosyltransferase involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 7:121,335,048...121,345,517
Ensembl chr 7:121,335,042...121,340,308
JBrowse link
G Clrn1 clarin 1 acts_upstream_of_or_within ISO MGI:3850171 (PMID:19414487) RGD PMID:19414487 NCBI chr 2:143,084,030...143,130,948
Ensembl chr 2:143,084,030...143,130,948
JBrowse link
G Elmod3 ELMO domain containing 3 acts_upstream_of_or_within ISO MGI:6455516 (PMID:31628468) RGD PMID:31628468 NCBI chr 4:104,614,665...104,653,122
Ensembl chr 4:104,614,676...104,653,053
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO MGI:3574787 (PMID:15630379) RGD PMID:15630379 NCBI chr16:66,491,930...66,547,161
Ensembl chr16:66,494,042...66,547,350
JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 involved_in IEA
ISO
GO_REF:0000107
MGI:2680653 (PMID:26084842)
Ensembl
RGD
PMID:26084842 GO_REF:0000107 NCBI chr 1:198,291,711...198,624,683
Ensembl chr 1:198,291,766...198,624,669
JBrowse link
G Lrtomt leucine rich transmembrane and O-methyltransferase domain containing involved_in ISO (MGI:3799635|PMID:18794526) RGD PMID:18794526 MGI:3799635 NCBI chr 1:156,266,655...156,268,704
Ensembl chr 1:156,266,655...156,268,704
JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 involved_in ISO (MGI:5477842|PMID:23533177) RGD PMID:23533177 MGI:5477842 NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808
JBrowse link
G Pdzd7 PDZ domain containing 7 acts_upstream_of_or_within ISO MGI:4433578 (PMID:24334608) RGD PMID:24334608 NCBI chr 1:243,888,295...243,907,778
Ensembl chr 1:243,888,281...243,906,839
JBrowse link
G Slc4a7 solute carrier family 4 member 7 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000118
MGI:2682641 (PMID:12808454)
GO_REF:0000033
TreeGrafter
RGD
GO_Central
PMID:12808454 GO_REF:0000033 GO_REF:0000118 NCBI chr15:10,585,307...10,664,780
Ensembl chr15:10,588,979...10,664,781
JBrowse link
G Tmc1 transmembrane channel-like 1 acts_upstream_of_or_within ISO MGI:5427097 (PMID:22105175) RGD PMID:22105175 NCBI chr 1:218,275,249...218,446,013
Ensembl chr 1:218,276,417...218,445,955
JBrowse link
auditory receptor cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 involved_in NAS PMID:10878608 UniProt PMID:10878608 RGD:8553270 NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
JBrowse link
G Jag2 jagged canonical Notch ligand 2 involved_in ISS
ISO
IEA
PMID:10080181
(MGI:1332721|PMID:10080181)
GO_REF:0000107
RGD
Ensembl
PMID:10080181 PMID:10080181 GO_REF:0000107 MGI:1332721, RGD:8553713 NCBI chr 6:131,983,059...132,005,665
Ensembl chr 6:131,983,056...132,005,818
JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO MGI:3044585|MGI:3046196 (PMID:19154718) RGD PMID:19154718 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region acts_upstream_of_or_within ISO MGI:3046196|MGI:3583755 (PMID:19154718) RGD PMID:19154718 NCBI chr14:57,338,493...57,523,330
Ensembl chr14:57,338,507...57,523,353
JBrowse link
auditory receptor cell fate determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh1 atonal bHLH transcription factor 1 acts_upstream_of_or_within ISO (PMID:16407553) RGD PMID:16407553 NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154
JBrowse link
auditory receptor cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh1 atonal bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:2155983 (PMID:10364557) RGD PMID:10364557 NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154
JBrowse link
auditory receptor cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir96 microRNA 96 acts_upstream_of_or_within ISO MGI:4354110 (PMID:19363478) RGD PMID:19363478 NCBI chr 4:58,788,411...58,788,516
Ensembl chr 4:58,788,411...58,788,516
JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within ISO MGI:2663662|MGI:2663669 (PMID:20016102) RGD PMID:20016102 NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251
JBrowse link
G Scrib scribble planar cell polarity protein acts_upstream_of_or_within ISO MGI:2139764 (PMID:20215345) RGD PMID:20215345 NCBI chr 7:107,759,343...107,782,364
Ensembl chr 7:107,759,343...107,782,331
JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within ISO MGI:2145950|MGI:4440621 (PMID:20215345) RGD PMID:20215345 NCBI chr 2:218,562,670...218,632,753
Ensembl chr 2:218,562,676...218,632,699
JBrowse link
G Slitrk6 SLIT and NTRK-like family, member 6 acts_upstream_of_or_within ISO MGI:4417931 (PMID:19936227) RGD PMID:19936227 NCBI chr15:87,563,506...87,570,125
Ensembl chr15:87,563,322...87,570,393
JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:5558098 (PMID:24302887)
Ensembl
RGD
PMID:24302887 GO_REF:0000107 NCBI chr14:95,645,955...95,977,120
Ensembl chr14:95,646,038...95,977,113
JBrowse link
auditory receptor cell stereocilium organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd24 ankyrin repeat domain 24 involved_in ISO (MGI:6885507|PMID:35175278) RGD PMID:35175278 MGI:6885507 NCBI chr 7:8,061,634...8,081,142
Ensembl chr 7:8,061,953...8,081,142
JBrowse link
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO MGI:1856799 (PMID:11875276) RGD PMID:11875276 NCBI chr 4:146,894,602...147,208,060
Ensembl chr 4:146,896,332...147,140,665
JBrowse link
G Cdh23 cadherin-related 23 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856228|MGI:1856681|MGI:1891428|MGI:2154548|MGI:2154549 (PMID:11138008), (PMID:11322776), (PMID:12121736), (PMID:15537665), (PMID:17050716), (PMID:23217710), (PMID:7610888), (PMID:8790740), (PMID:9039475)
Ensembl
RGD
PMID:7610888 PMID:8790740 PMID:9039475 PMID:11138008 PMID:11322776 More... GO_REF:0000107 NCBI chr20:28,240,643...28,622,490
Ensembl chr20:28,240,645...28,622,419
JBrowse link
G Clic5 chloride intracellular channel 5 acts_upstream_of_or_within ISO MGI:3663254 (PMID:17021174) RGD PMID:17021174 NCBI chr 9:16,710,980...16,813,502
Ensembl chr 9:16,710,980...16,813,427
JBrowse link
G Clrn1 clarin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3850171 (PMID:19414487), (PMID:19423712)
Ensembl
RGD
PMID:19414487 PMID:19423712 GO_REF:0000107 NCBI chr 2:143,084,030...143,130,948
Ensembl chr 2:143,084,030...143,130,948
JBrowse link
G Clrn2 clarin 2 involved_in ISO (MGI:6810803|PMID:33496845) RGD PMID:33496845 MGI:6810803 NCBI chr14:65,656,029...65,666,325
Ensembl chr14:65,656,550...65,666,193
JBrowse link
G Grxcr2 glutaredoxin and cysteine rich domain containing 2 acts_upstream_of_or_within ISO MGI:2139535|MGI:6281113|MGI:6281114 (PMID:30380417) RGD PMID:30380417 NCBI chr18:33,984,689...33,998,094
Ensembl chr18:33,984,689...33,998,094
JBrowse link
G Lhfpl5 LHFPL tetraspan subfamily member 5 acts_upstream_of_or_within ISO MGI:3055797|MGI:3718054 (PMID:15905332), (PMID:17876667), (PMID:23217710) RGD PMID:15905332 PMID:17876667 PMID:23217710 NCBI chr20:6,632,324...6,642,534
Ensembl chr20:6,632,362...6,642,532
JBrowse link
G Myo3a myosin IIIA involved_in ISO MGI:2448580 (PMID:26754646) RGD PMID:26754646 NCBI chr17:84,543,465...84,759,562
Ensembl chr17:84,543,552...84,759,042
JBrowse link
G Myo3b myosin IIIB involved_in ISO MGI:2183924 (PMID:26754646) RGD PMID:26754646 NCBI chr 3:54,820,225...55,228,518
Ensembl chr 3:54,820,251...55,227,373
JBrowse link
G Myo7a myosin VIIA acts_upstream_of_or_within ISO MGI:1860092|MGI:2155422 (PMID:11753415), (PMID:12121736), (PMID:17050716) RGD PMID:11753415 PMID:12121736 PMID:17050716 NCBI chr 1:152,342,611...152,414,171
Ensembl chr 1:152,344,448...152,414,157
JBrowse link
G Nherf1 NHERF family PDZ scaffold protein 1 acts_upstream_of_or_within ISO MGI:3526430 (PMID:24920589) RGD PMID:24920589 NCBI chr10:100,403,189...100,420,290
Ensembl chr10:100,403,069...100,420,598
JBrowse link
G Pcdh15 protocadherin related 15 acts_upstream_of_or_within ISO MGI:1855958|MGI:1856394|MGI:1856396|MGI:1890219|MGI:2151877|MGI:3505691 (PMID:10978835), (PMID:11124469), (PMID:15537665), (PMID:16887306), (PMID:23217710) RGD PMID:10978835 PMID:11124469 PMID:15537665 PMID:16887306 PMID:23217710 NCBI chr20:13,997,094...15,496,446
Ensembl chr20:13,963,565...15,494,719
JBrowse link
G Pdzd7 PDZ domain containing 7 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:4433578 (PMID:24334608)
GO_Central
RGD
PMID:24334608 GO_REF:0000033 NCBI chr 1:243,888,295...243,907,778
Ensembl chr 1:243,888,281...243,906,839
JBrowse link
G Pls1 plastin 1 involved_in ISO (MGI:5608770|PMID:25124451) RGD PMID:25124451 MGI:5608770 NCBI chr 8:96,316,703...96,426,592
Ensembl chr 8:96,317,849...96,385,195
JBrowse link
G Rest RE1-silencing transcription factor involved_in ISS
ISO
GO_REF:0000024
(MGI:6193260|PMID:29961578)
UniProt
RGD
PMID:29961578 GO_REF:0000024 MGI:6193260 NCBI chr14:30,859,109...30,879,828
Ensembl chr14:30,862,553...30,894,354
JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 involved_in ISO (MGI:5789047|PMID:27269051) RGD PMID:27269051 MGI:5789047 NCBI chr17:40,323,748...40,547,482
Ensembl chr17:40,323,867...40,548,092
JBrowse link
G Scrib scribble planar cell polarity protein acts_upstream_of_or_within ISO MGI:2139764 (PMID:20215345) RGD PMID:20215345 NCBI chr 7:107,759,343...107,782,364
Ensembl chr 7:107,759,343...107,782,331
JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within ISO MGI:2145950|MGI:4440621 (PMID:20215345) RGD PMID:20215345 NCBI chr 2:218,562,670...218,632,753
Ensembl chr 2:218,562,676...218,632,699
JBrowse link
G Sod1 superoxide dismutase 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:1857872 (PMID:10464373), (PMID:10466888)
UniProt
RGD
PMID:10464373 PMID:10466888 GO_REF:0000024 NCBI chr11:29,456,673...29,462,249
Ensembl chr11:29,456,558...29,462,249
JBrowse link
G Strc stereocilin involved_in
acts_upstream_of_or_within
ISO (MGI:5430850|PMID:21165971)
MGI:109575|MGI:3818633 (PMID:18849963), (PMID:30801007)
RGD PMID:18849963 PMID:21165971 PMID:30801007 MGI:5430850 NCBI chr 3:108,335,920...108,355,114
Ensembl chr 3:108,335,747...108,354,134
JBrowse link
G Tecta tectorin alpha acts_upstream_of_or_within ISO MGI:2153816 (PMID:30801007) RGD PMID:30801007 NCBI chr 8:42,707,962...42,779,726
Ensembl chr 8:42,707,962...42,779,707
JBrowse link
G Tprn taperin involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:2685697 (PMID:30380417)
GO_Central
RGD
PMID:30380417 GO_REF:0000033 NCBI chr 3:8,076,164...8,083,642
Ensembl chr 3:8,075,137...8,083,642
JBrowse link
G Triobp TRIO and F-actin binding protein acts_upstream_of_or_within ISO MGI:4881773 (PMID:20510926) RGD PMID:20510926 NCBI chr 7:110,505,916...110,569,301
Ensembl chr 7:110,506,248...110,562,474
JBrowse link
G Whrn whirlin involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
MGI:4432119 (PMID:27117407)
GO_REF:0000033
GO_REF:0000118
Ensembl
RGD
GO_Central
TreeGrafter
PMID:27117407 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:76,828,308...76,911,945
Ensembl chr 5:76,828,301...76,912,223
JBrowse link
blood vessel endothelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccm2 CCM2 scaffold protein acts_upstream_of_or_within ISO MGI:3512761 (PMID:19151727) RGD PMID:19151727 NCBI chr14:81,418,418...81,464,114
Ensembl chr14:81,418,236...81,464,116
JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 acts_upstream_of_or_within ISO MGI:1341884 (PMID:15107403) RGD PMID:15107403 NCBI chr 2:93,096,605...93,100,316
Ensembl chr 2:93,095,498...93,100,312
JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 acts_upstream_of_or_within ISO MGI:1341800 (PMID:15107403) RGD PMID:15107403 NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218
JBrowse link
G Kdr kinase insert domain receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3530468 (PMID:15644447)
Ensembl
RGD
PMID:15644447 GO_REF:0000107 NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018
JBrowse link
G Lipa lipase A, lysosomal acid type involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:6364606 (PMID:33357458)
Ensembl
RGD
PMID:33357458 GO_REF:0000107 NCBI chr 1:232,024,351...232,057,735
Ensembl chr 1:232,024,356...232,057,633
JBrowse link
G Prox1 prospero homeobox 1 acts_upstream_of_or_within ISO MGI:2386336 (PMID:11927535) RGD PMID:11927535 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183
JBrowse link
blood vessel endothelial cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rbpj recombination signal binding protein for immunoglobulin kappa J region involved_in ISO UniProtKB:P52800 (MGI:3056004|PMID:15466160) RGD PMID:15466160 MGI:3056004 NCBI chr14:57,338,493...57,523,330
Ensembl chr14:57,338,507...57,523,353
JBrowse link
carotid body glomus cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:1857470 (PMID:15878769) RGD PMID:15878769 NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993
JBrowse link
club cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata6 GATA binding protein 6 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:108067 (PMID:17164424)
Ensembl
RGD
PMID:17164424 GO_REF:0000107 NCBI chr18:2,188,121...2,219,532
Ensembl chr18:2,188,121...2,219,532
JBrowse link
G Nfib nuclear factor I/B involved_in ISS
ISO
GO_REF:0000024
(MGI:5049839|PMID:21513708)
UniProt
RGD
PMID:21513708 GO_REF:0000024 MGI:5049839 NCBI chr 5:96,759,208...96,974,001
Ensembl chr 5:96,764,653...96,975,479
JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:107516 (PMID:17164424)
Ensembl
RGD
PMID:17164424 GO_REF:0000107 NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region acts_upstream_of_or_within ISO MGI:3583755 (PMID:22797898) RGD PMID:22797898 NCBI chr14:57,338,493...57,523,330
Ensembl chr14:57,338,507...57,523,353
JBrowse link
columnar/cuboidal epithelial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ros1 ROS proto-oncogene 1 , receptor tyrosine kinase involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:80739|PMID:8675006)
UniProt
Ensembl
RGD
PMID:8675006 GO_REF:0000024 GO_REF:0000107 MGI:80739 NCBI chr20:31,432,636...31,583,998
Ensembl chr20:31,432,637...31,583,865
JBrowse link
G Shroom3 shroom family member 3 acts_upstream_of_or_within ISO (PMID:16249236) RGD PMID:16249236 NCBI chr14:15,099,415...15,396,832
Ensembl chr14:15,099,423...15,396,915
JBrowse link
columnar/cuboidal epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dmbt1 deleted in malignant brain tumors 1 acts_upstream_of ISO (PMID:15452149) RGD PMID:15452149 NCBI chr 1:185,617,469...185,696,476
Ensembl chr 1:185,617,294...185,696,478
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within ISO MGI:107423|MGI:1917942|MGI:1923373|MGI:2443665 (PMID:21385765) RGD PMID:21385765 NCBI chr 5:4,863,501...5,101,483
Ensembl chr 5:4,955,543...5,101,483
JBrowse link
columnar/cuboidal epithelial cell maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gja1 gap junction protein, alpha 1 acts_upstream_of_or_within ISO MGI:2176205|MGI:3051881 (PMID:16624854) RGD PMID:16624854 NCBI chr20:35,756,007...35,768,481
Ensembl chr20:35,755,991...35,768,582
JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 acts_upstream_of_or_within ISO MGI:3050114 (PMID:15328414) RGD PMID:15328414 NCBI chr15:302,480...1,007,675
Ensembl chr15:302,214...1,001,198
JBrowse link
G Tgfb1 transforming growth factor, beta 1 acts_upstream_of_or_within ISO (PMID:31336344) RGD PMID:31336344 NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
JBrowse link
corneocyte desquamation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca12 ATP binding cassette subfamily A member 12 involved_in ISO (PMID:19179616)
(MGI:6161848|PMID:27551807)
RGD PMID:19179616 PMID:27551807 MGI:6161848 NCBI chr 9:72,822,661...72,995,748
Ensembl chr 9:72,823,350...72,996,049
JBrowse link
G Cdsn corneodesmosin involved_in ISO (PMID:26014679) RGD PMID:26014679 NCBI chr20:3,179,432...3,184,252
Ensembl chr20:3,179,438...3,184,250
JBrowse link
corneocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnase1l2 deoxyribonuclease 1 like 2 acts_upstream_of_or_within ISO MGI:5308556 (PMID:21307874) RGD PMID:21307874 NCBI chr10:13,471,850...13,473,447
Ensembl chr10:13,471,479...13,473,763
JBrowse link
G Psap prosaposin acts_upstream_of_or_within ISO MGI:1888378|MGI:2183897 (PMID:24872419) RGD PMID:24872419 NCBI chr20:28,214,229...28,240,501
Ensembl chr20:28,214,271...28,240,498
JBrowse link
cornification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cers3 ceramide synthase 3 involved_in ISO (MGI:5303015|PMID:22038835) RGD PMID:22038835 MGI:5303015 NCBI chr 1:120,316,930...120,422,926
Ensembl chr 1:120,318,212...120,422,902
JBrowse link
G Cyp26b1 cytochrome P450, family 26, subfamily b, polypeptide 1 acts_upstream_of_or_within ISO MGI:3039046 (PMID:22366455) RGD PMID:22366455 NCBI chr 4:117,041,808...117,058,628
Ensembl chr 4:117,041,808...117,058,628
JBrowse link
G Tmem79 transmembrane protein 79 acts_upstream_of_or_within ISO MGI:1856947 (PMID:24084074) RGD PMID:24084074 NCBI chr 2:173,798,267...173,803,151
Ensembl chr 2:173,798,267...173,803,046
JBrowse link
cumulus cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nppc natriuretic peptide C involved_in ISO MGI:2388899 (PMID:22696190) RGD PMID:22696190 NCBI chr 9:87,320,051...87,324,251
Ensembl chr 9:87,320,051...87,324,251
JBrowse link
G Npr2 natriuretic peptide receptor 2 involved_in IEA
ISO
GO_REF:0000107
MGI:1856702 (PMID:22696190)
Ensembl
RGD
PMID:22696190 GO_REF:0000107 NCBI chr 5:57,883,171...57,901,590
Ensembl chr 5:57,883,171...57,901,580
JBrowse link
de novo centriole assembly involved in multi-ciliated epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc78 coiled-coil domain containing 78 involved_in ISO (PMID:24075808) RGD PMID:24075808 NCBI chr10:14,808,355...14,812,284
Ensembl chr10:14,807,710...14,812,282
JBrowse link
G Cep152 centrosomal protein 152 involved_in ISO (MGI:5527201|PMID:24240477) RGD PMID:24240477 MGI:5527201 NCBI chr 3:112,803,185...112,878,298
Ensembl chr 3:112,810,425...112,878,458
Ensembl chr 3:112,810,425...112,878,458
JBrowse link
G Cep63 centrosomal protein 63 involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 8:103,162,639...103,214,177
Ensembl chr 8:103,162,700...103,214,177
JBrowse link
G Deup1 deuterosome assembly protein 1 involved_in ISS
IBA
IEA
ISO
GO_REF:0000024
GO_REF:0000033
GO_REF:0000118
GO_REF:0000107
(MGI:5527201|PMID:24240477)
UniProt
GO_Central
TreeGrafter
Ensembl
RGD
PMID:24240477 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:5527201 NCBI chr 8:12,380,300...12,442,649
Ensembl chr 8:12,380,302...12,442,199
JBrowse link
G Plk4 polo-like kinase 4 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:5527201|PMID:24240477)
UniProt
Ensembl
RGD
PMID:24240477 GO_REF:0000024 GO_REF:0000107 MGI:5527201 NCBI chr 2:123,802,527...123,820,942
Ensembl chr 2:123,802,512...123,820,942
JBrowse link
endocardial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Notch1 notch receptor 1 involved_in ISO (MGI:4837019|PMID:20890042) RGD PMID:20890042 MGI:4837019 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
JBrowse link
G Nrg1 neuregulin 1 involved_in ISO
IEA
(PMID:17336907)
GO_REF:0000107
RGD
Ensembl
PMID:17336907 GO_REF:0000107 NCBI chr16:59,250,658...60,304,519
Ensembl chr16:59,250,854...60,296,884
JBrowse link
G Smad4 SMAD family member 4 involved_in IEA
ISO
GO_REF:0000107
(MGI:4946551|PMID:21330551)
Ensembl
RGD
PMID:21330551 GO_REF:0000107 MGI:4946551 NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438
JBrowse link
G Sox17 SRY-box transcription factor 17 acts_upstream_of_or_within ISO MGI:103559 (PMID:17610846) RGD PMID:17610846 NCBI chr 5:15,016,660...15,022,228
Ensembl chr 5:15,016,731...15,022,228
JBrowse link
G Sox18 SRY-box transcription factor 18 acts_upstream_of_or_within ISO MGI:107543 (PMID:17610846) RGD PMID:17610846 NCBI chr 3:168,785,488...168,787,290
Ensembl chr 3:168,785,490...168,787,290
JBrowse link
endocardial cushion cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 involved_in ISO
IEA
(PMID:19506109)
GO_REF:0000107
RGD
Ensembl
PMID:19506109 GO_REF:0000107 NCBI chr 3:42,978,558...43,097,892
Ensembl chr 3:42,978,561...43,098,241
JBrowse link
endothelial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccm2 CCM2 scaffold protein acts_upstream_of_or_within ISO MGI:1924696|MGI:3512761 (PMID:19151727) RGD PMID:19151727 NCBI chr14:81,418,418...81,464,114
Ensembl chr14:81,418,236...81,464,116
JBrowse link
G Gpx1 glutathione peroxidase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2158814 (PMID:16373599)
Ensembl
RGD
PMID:16373599 GO_REF:0000107 NCBI chr 8:109,026,905...109,028,031
Ensembl chr 8:109,026,905...109,028,024
JBrowse link
G Heg1 heart development protein with EGF-like domains 1 acts_upstream_of_or_within ISO MGI:2384924 (PMID:19151727) RGD PMID:19151727 NCBI chr11:67,006,954...67,095,020
Ensembl chr11:66,957,190...67,095,051
JBrowse link
G Ubiad1 UbiA prenyltransferase domain containing 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:158,856,582...158,880,490
Ensembl chr 5:158,868,672...158,880,271
JBrowse link
G Vezf1 vascular endothelial zinc finger 1 acts_upstream_of_or_within ISO MGI:3583268 (PMID:15882861) RGD PMID:15882861 NCBI chr10:72,859,669...72,876,111
Ensembl chr10:72,859,877...72,876,111
JBrowse link
endothelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Barx1 BARX homeobox 1 acts_upstream_of_or_within ISO (PMID:15809042) RGD PMID:15809042 NCBI chr17:15,990,412...15,993,887
Ensembl chr17:15,990,412...15,993,887
JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 IMP RGD PMID:24955809 RGD:11352686 NCBI chr13:40,077,976...40,081,883
Ensembl chr13:40,077,976...40,081,883
JBrowse link
G Fstl1 follistatin-like 1 involved_in ISO
ISS
(MGI:4457221|PMID:20054002)
GO_REF:0000024
RGD
UniProt
PMID:20054002 GO_REF:0000024 MGI:4457221 NCBI chr11:62,895,391...62,948,581
Ensembl chr11:62,779,783...62,948,677
JBrowse link
G Fzd1 frizzled class receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:103124 (PMID:15809042)
Ensembl
RGD
PMID:15809042 GO_REF:0000107 NCBI chr 4:29,310,303...29,314,701
Ensembl chr 4:29,310,091...29,312,643
Ensembl chr 4:29,310,091...29,312,643
JBrowse link
G Fzd2 frizzled class receptor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:103124 (PMID:15809042)
Ensembl
RGD
PMID:15809042 GO_REF:0000107 NCBI chr10:87,561,866...87,563,776
Ensembl chr10:87,561,326...87,565,334
JBrowse link
G Fzd4 frizzled class receptor 4 acts_upstream_of_or_within ISO (PMID:23217714) RGD PMID:23217714 NCBI chr 1:143,279,934...143,288,799
Ensembl chr 1:143,280,065...143,285,724
JBrowse link
G Hoxb5 homeo box B5 acts_upstream_of_or_within ISO (PMID:12897140) RGD PMID:12897140 NCBI chr10:81,269,372...81,271,580
Ensembl chr10:81,269,372...81,271,580
JBrowse link
G Kdm6b lysine demethylase 6B involved_in ISO (MGI:5574281|PMID:23856522) RGD PMID:23856522 MGI:5574281 NCBI chr10:54,120,716...54,142,212
Ensembl chr10:54,121,848...54,130,794
JBrowse link
G Kdr kinase insert domain receptor involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000118
(PMID:12897140), (PMID:18772315)
GO_REF:0000033
TreeGrafter
RGD
GO_Central
PMID:12897140 PMID:18772315 GO_REF:0000033 GO_REF:0000118 NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018
JBrowse link
G Mesp1 mesoderm posterior bHLH transcription factor 1 involved_in ISO (PMID:18297060) RGD PMID:18297060 NCBI chr 1:133,738,357...133,739,875
Ensembl chr 1:133,738,357...133,739,875
JBrowse link
G Ndp norrin cystine knot growth factor NDP acts_upstream_of_or_within ISO (PMID:23217714) RGD PMID:23217714 NCBI chr  X:5,796,487...5,820,934
Ensembl chr  X:5,796,487...5,820,934
JBrowse link
G Notch4 notch receptor 4 IDA RGD PMID:10964583 RGD:1304484 NCBI chr20:4,160,362...4,184,466
Ensembl chr20:4,160,445...4,184,465
JBrowse link
G Ptn pleiotrophin IEP RGD PMID:20830586 RGD:9686141 NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456
JBrowse link
G S1pr1 sphingosine-1-phosphate receptor 1 IEP RGD PMID:7959012 RGD:61573 NCBI chr 2:203,624,752...203,629,110
Ensembl chr 2:203,621,587...203,629,681
JBrowse link
G Setsip SET like protein involved_in ISO (PMID:22869753) RGD PMID:22869753 NCBI chr19:53,561,262...53,562,780
Ensembl chr19:53,561,190...53,563,819
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor acts_upstream_of ISO MGI:2136645|MGI:3608931 (PMID:25186293) RGD PMID:25186293 NCBI chr 4:146,772,483...146,779,376
Ensembl chr 4:146,772,468...146,779,377
JBrowse link
endothelial cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxa13 homeo box A13 acts_upstream_of_or_within ISO MGI:2152356 (PMID:18483557) RGD PMID:18483557 NCBI chr 4:81,358,956...81,361,091
Ensembl chr 4:81,358,956...81,361,091
JBrowse link
endothelial cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgef26 Rho guanine nucleotide exchange factor 26 acts_upstream_of_or_within ISO MGI:5500046 (PMID:23372835) RGD PMID:23372835 NCBI chr 2:146,740,336...146,850,918
Ensembl chr 2:146,739,631...146,850,819
JBrowse link
G Clic4 chloride intracellular channel 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3838012 (PMID:19197003)
Ensembl
RGD
PMID:19197003 GO_REF:0000107 NCBI chr 5:147,453,702...147,513,455
Ensembl chr 5:147,453,712...147,513,452
JBrowse link
G Cnmd chondromodulin acts_upstream_of_or_within ISO (PMID:12714610) RGD PMID:12714610 NCBI chr15:55,041,548...55,066,297
Ensembl chr15:55,041,561...55,066,297
JBrowse link
G Col18a1 collagen type XVIII alpha 1 chain involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:15188432)
GO_Central
RGD
PMID:15188432 GO_REF:0000033 NCBI chr20:11,474,104...11,582,593
Ensembl chr20:11,474,104...11,582,593
JBrowse link
G Col27a1 collagen type XXVII alpha 1 chain involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:76,647,302...76,765,989
Ensembl chr 5:76,647,429...76,765,174
JBrowse link
G Heg1 heart development protein with EGF-like domains 1 acts_upstream_of_or_within ISO MGI:3838392 (PMID:19151727) RGD PMID:19151727 NCBI chr11:67,006,954...67,095,020
Ensembl chr11:66,957,190...67,095,051
JBrowse link
G Hoxa13 homeo box A13 acts_upstream_of_or_within ISO MGI:2152356 (PMID:18483557) RGD PMID:18483557 NCBI chr 4:81,358,956...81,361,091
Ensembl chr 4:81,358,956...81,361,091
JBrowse link
G Id1 inhibitor of DNA binding 1 acts_upstream_of_or_within ISO MGI:2679939 (PMID:17717145) RGD PMID:17717145 NCBI chr 3:141,210,666...141,212,420
Ensembl chr 3:141,211,267...141,212,419
JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO MGI:2157527 (PMID:21285373) RGD PMID:21285373 NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase involved_in ISO
IEA
(PMID:14500721)
GO_REF:0000107
RGD
Ensembl
PMID:14500721 GO_REF:0000107 NCBI chr 4:45,790,456...45,898,139
Ensembl chr 4:45,790,791...45,897,876
JBrowse link
G Notch4 notch receptor 4 IDA RGD PMID:10964583 RGD:1304484 NCBI chr20:4,160,362...4,184,466
Ensembl chr20:4,160,445...4,184,465
JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 acts_upstream_of_or_within ISO MGI:2677448 (PMID:17563397) RGD PMID:17563397 NCBI chr10:91,590,521...91,652,279
Ensembl chr10:91,590,521...91,652,116
JBrowse link
G Plod3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3620600|MGI:3620601 (PMID:16467571)
Ensembl
RGD
PMID:16467571 GO_REF:0000107 NCBI chr12:19,676,384...19,686,945
Ensembl chr12:19,676,386...19,686,960
JBrowse link
G Stc1 stanniocalcin 1 involved_in ISO (PMID:14500721) RGD PMID:14500721 NCBI chr15:44,299,591...44,311,695
Ensembl chr15:44,299,621...44,310,264
JBrowse link
G Tnmd tenomodulin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:12714610)
Ensembl
RGD
PMID:12714610 GO_REF:0000107 NCBI chr  X:97,057,137...97,072,634
Ensembl chr  X:97,057,137...97,072,634
JBrowse link
endothelial tip cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5466218|PMID:22282195)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:22282195 GO_REF:0000024 GO_REF:0000107 MGI:5466218 NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
JBrowse link
G Flvcr2 FLVCR choline and putative heme transporter 2 acts_upstream_of_or_within ISO (PMID:32369453) RGD PMID:32369453 NCBI chr 6:105,408,355...105,472,355
Ensembl chr 6:105,408,339...105,472,353
JBrowse link
enterocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Yap1 Yes1 associated transcriptional regulator involved_in
acts_upstream_of
IEA
ISO
GO_REF:0000107
(PMID:17980593)
Ensembl
RGD
PMID:17980593 GO_REF:0000107 NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010
JBrowse link
enteroendocrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Neurod1 neuronal differentiation 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:1096974|PMID:9308961)
UniProt
RGD
PMID:9308961 GO_REF:0000024 MGI:1096974 NCBI chr 3:64,359,554...64,363,526
Ensembl chr 3:64,359,395...64,363,649
JBrowse link
G Nkx6-3 NK6 homeobox 3 acts_upstream_of
acts_upstream_of_or_within
ISO MGI:3795186 (PMID:18347062) RGD PMID:18347062 NCBI chr16:68,868,404...68,873,617
Ensembl chr16:68,868,404...68,873,617
JBrowse link
G Onecut1 one cut homeobox 1 acts_upstream_of_or_within ISO MGI:2179340 (PMID:10825208) RGD PMID:10825208 NCBI chr 8:75,599,432...75,633,598
Ensembl chr 8:75,599,740...75,627,277
JBrowse link
G Pdx1 pancreatic and duodenal homeobox 1 acts_upstream_of_or_within ISO MGI:2181362 (PMID:16418487) RGD PMID:16418487 NCBI chr12:7,757,865...7,763,064
Ensembl chr12:7,757,865...7,763,064
JBrowse link
G Percc1 proline and glutamate rich with coiled coil 1 involved_in ISO (MGI:6368375|PMID:31217582) RGD PMID:31217582 MGI:6368375 NCBI chr10:14,187,858...14,190,634
Ensembl chr10:14,188,216...14,189,040
Ensembl chr10:14,188,216...14,189,040
JBrowse link
G Rbm4 RNA binding motif protein 4 acts_upstream_of_or_within ISO MGI:5467987|MGI:5467988 (PMID:23129807) RGD PMID:23129807 NCBI chr 1:202,078,442...202,087,506
Ensembl chr 1:202,085,279...202,105,380
JBrowse link
epidermal cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit acts_upstream_of ISO MGI:2661097 (PMID:19303854) RGD PMID:19303854 NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362
JBrowse link
G Flg filaggrin IMP
NAS
RGD PMID:7688400 PMID:12230510 RGD:1598950, RGD:1598948 NCBI chr 2:178,884,793...178,912,986 JBrowse link
G Gak cyclin G associated kinase acts_upstream_of_or_within ISO MGI:2445832|MGI:5305733 (PMID:18434600) RGD PMID:18434600 NCBI chr14:1,089,853...1,164,098
Ensembl chr14:1,089,866...1,216,398
JBrowse link
G Gli1 GLI family zinc finger 1 involved_in ISO (PMID:12165851) RGD PMID:12165851 NCBI chr 7:63,156,926...63,169,579
Ensembl chr 7:63,156,926...63,169,251
JBrowse link
G Gli2 GLI family zinc finger 2 involved_in ISO (PMID:12165851) RGD PMID:12165851 NCBI chr13:29,946,882...30,163,589
Ensembl chr13:29,946,809...30,163,574
JBrowse link
G Hdac1 histone deacetylase 1 involved_in ISO UniProtKB:P70288 (MGI:4889029|PMID:21093383) RGD PMID:21093383 MGI:4889029 NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111
JBrowse link
G Hdac2 histone deacetylase 2 involved_in ISO UniProtKB:O09106 (MGI:4889029|PMID:21093383) RGD PMID:21093383 MGI:4889029 NCBI chr20:40,548,244...40,571,609
Ensembl chr20:40,548,250...40,571,609
JBrowse link
G Klf4 KLF transcription factor 4 acts_upstream_of_or_within ISO MGI:2183936 (PMID:10431239) RGD PMID:10431239 NCBI chr 5:70,278,843...70,283,751
Ensembl chr 5:70,278,972...70,283,602
JBrowse link
G Ovol1 ovo like transcriptional repressor 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:202,855,261...202,868,858
Ensembl chr 1:202,855,265...202,866,831
JBrowse link
G Ovol2 ovo-like zinc finger 2 involved_in ISO
IBA
(MGI:5574425|PMID:24735879)
GO_REF:0000033
RGD
GO_Central
PMID:24735879 GO_REF:0000033 MGI:5574425 NCBI chr 3:131,677,391...131,707,123
Ensembl chr 3:131,677,391...131,708,359
JBrowse link
G Ovol3 ovo-like zinc finger 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:85,484,956...85,488,592
Ensembl chr 1:85,484,956...85,488,592
JBrowse link
G Spink5 serine peptidase inhibitor, Kazal type 5 involved_in ISO (PMID:12915442) RGD PMID:12915442 NCBI chr18:36,264,452...36,333,143
Ensembl chr18:36,264,452...36,332,185
JBrowse link
G Tp63 tumor protein p63 acts_upstream_of_or_within ISO MGI:5882555 (PMID:25503409) RGD PMID:25503409 NCBI chr11:74,838,858...75,049,764
Ensembl chr11:74,838,859...75,049,398
JBrowse link
epidermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxi3 forkhead box I3 involved_in ISO (MGI:5881890|PMID:26450968) RGD PMID:26450968 MGI:5881890 NCBI chr 4:102,933,487...102,937,655
Ensembl chr 4:102,933,409...102,937,655
JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO MGI:2178778 (PMID:15068794) RGD PMID:15068794 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
JBrowse link
G Ptch1 patched 1 acts_upstream_of_or_within ISO MGI:1095405 (PMID:24492243) RGD PMID:24492243 NCBI chr17:1,542,705...1,607,730
Ensembl chr17:1,542,877...1,607,333
JBrowse link
G Ptch2 patched 2 acts_upstream_of_or_within ISO MGI:105373 (PMID:24492243) RGD PMID:24492243 NCBI chr 5:130,571,956...130,592,506
Ensembl chr 5:130,572,312...130,592,405
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region acts_upstream_of_or_within ISO MGI:1926500|MGI:3583755 (PMID:17079689) RGD PMID:17079689 NCBI chr14:57,338,493...57,523,330
Ensembl chr14:57,338,507...57,523,353
JBrowse link
epithelial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamtsl4 ADAMTS-like 4 acts_upstream_of_or_within ISO (PMID:26405179) RGD PMID:26405179 NCBI chr 2:183,235,634...183,247,091
Ensembl chr 2:183,235,646...183,246,848
JBrowse link
G B4galt1 beta-1,4-galactosyltransferase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2450889 (PMID:9155011)
Ensembl
RGD
PMID:9155011 GO_REF:0000107 NCBI chr 5:55,935,614...55,982,461
Ensembl chr 5:55,935,615...55,982,461
JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 IMP RGD PMID:15358596 RGD:1600768 NCBI chr13:40,077,976...40,081,883
Ensembl chr13:40,077,976...40,081,883
JBrowse link
G E2f4 E2F transcription factor 4 acts_upstream_of_or_within ISO MGI:1888952 (PMID:17383628) RGD PMID:17383628 NCBI chr19:33,174,396...33,181,806
Ensembl chr19:33,174,410...33,181,806
JBrowse link
G Esr1 estrogen receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2150897 (PMID:18755802)
Ensembl
RGD
PMID:18755802 GO_REF:0000107 NCBI chr 1:41,106,335...41,499,104
Ensembl chr 1:41,210,475...41,495,002
JBrowse link
G Frzb frizzled-related protein acts_upstream_of ISO (PMID:19562671) RGD PMID:19562671 NCBI chr 3:65,332,274...65,365,208
Ensembl chr 3:65,332,277...65,365,208
JBrowse link
G Gak cyclin G associated kinase acts_upstream_of_or_within ISO MGI:2176228|MGI:5305733 (PMID:18434600) RGD PMID:18434600 NCBI chr14:1,089,853...1,164,098
Ensembl chr14:1,089,866...1,216,398
JBrowse link
G Hydin Hydin, axonemal central pair apparatus protein acts_upstream_of_or_within ISO MGI:1856913 (PMID:18250199) RGD PMID:18250199 NCBI chr19:38,236,996...38,583,271
Ensembl chr19:38,236,464...38,583,264
JBrowse link
G Onecut1 one cut homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2179340 (PMID:16472605)
Ensembl
RGD
PMID:16472605 GO_REF:0000107 NCBI chr 8:75,599,432...75,633,598
Ensembl chr 8:75,599,740...75,627,277
JBrowse link
G Onecut2 one cut homeobox 2 acts_upstream_of_or_within ISO MGI:3588425 (PMID:16472605) RGD PMID:16472605 NCBI chr18:57,831,647...57,890,884
Ensembl chr18:57,832,111...57,879,629
JBrowse link
G Pax6 paired box 6 IMP corneal epithelial cells RGD PMID:19393751 RGD:8552646 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
JBrowse link
G Slc4a5 solute carrier family 4 member 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:21705333)
Ensembl
RGD
PMID:21705333 GO_REF:0000107 NCBI chr 4:115,710,101...115,810,330
Ensembl chr 4:115,725,592...115,810,323
JBrowse link
G Tp63 tumor protein p63 acts_upstream_of_or_within ISO MGI:1934269 (PMID:21127502) RGD PMID:21127502 NCBI chr11:74,838,858...75,049,764
Ensembl chr11:74,838,859...75,049,398
JBrowse link
epithelial cell differentiation involved in mammary gland alveolus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxb1 forkhead box B1 involved_in ISO (MGI:1931655|PMID:11170346) RGD PMID:11170346 MGI:1931655 NCBI chr 8:70,407,221...70,409,841
Ensembl chr 8:70,408,186...70,409,781
JBrowse link
G Foxf1 forkhead box F1 acts_upstream_of_or_within ISO MGI:96432 (PMID:16691571) RGD PMID:16691571 NCBI chr19:49,153,949...49,157,741
Ensembl chr19:49,153,699...49,157,738
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2386679 (PMID:12620994)
Ensembl
RGD
PMID:12620994 GO_REF:0000107 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:2446740|PMID:12456807)
UniProt
RGD
PMID:12456807 GO_REF:0000024 MGI:2446740 NCBI chr 6:41,740,556...41,742,393
Ensembl chr 6:41,728,946...41,744,400
JBrowse link
epithelial cell differentiation involved in prostate gland development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2385927|MGI:2451025 (PMID:17652515)
Ensembl
RGD
PMID:17652515 GO_REF:0000107 NCBI chr  X:63,104,771...63,273,934
Ensembl chr  X:63,104,771...63,273,925
JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1858008 (PMID:12813461)
Ensembl
RGD
PMID:12813461 GO_REF:0000107 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Plaur plasminogen activator, urokinase receptor IMP RGD PMID:11798065 RGD:729659 NCBI chr 1:80,053,440...80,068,384
Ensembl chr 1:80,050,324...80,068,595
JBrowse link
G Psap prosaposin involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000118
MGI:1888378 (PMID:11105903)
GO_REF:0000033
TreeGrafter
RGD
GO_Central
PMID:11105903 GO_REF:0000033 GO_REF:0000118 NCBI chr20:28,214,229...28,240,501
Ensembl chr20:28,214,271...28,240,498
JBrowse link
G Psapl1 prosaposin-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:74,544,646...74,547,206
Ensembl chr14:74,544,646...74,547,206
JBrowse link
G Stat5a signal transducer and activator of transcription 5A acts_upstream_of_or_within ISO MGI:1857249 (PMID:10908145) RGD PMID:10908145 NCBI chr10:85,785,537...85,809,869
Ensembl chr10:85,785,537...85,809,866
JBrowse link
epithelial cell differentiation involved in salivary gland development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnd1 catenin delta 1 acts_upstream_of_or_within ISO MGI:3617486 (PMID:16399075) RGD PMID:16399075 NCBI chr 3:69,683,328...69,734,550
Ensembl chr 3:69,683,313...69,734,516
JBrowse link
epithelial cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arx aristaless related homeobox involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3803178 (PMID:22387004)
Ensembl
RGD
PMID:22387004 GO_REF:0000107 NCBI chr  X:58,016,233...58,028,149
Ensembl chr  X:58,016,233...58,028,142
JBrowse link
G Chrd chordin involved_in ISO (PMID:11969257) RGD PMID:11969257 NCBI chr11:80,171,994...80,181,166
Ensembl chr11:80,171,994...80,180,673
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO MGI:1931521 (PMID:19407216) RGD PMID:19407216 NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341
JBrowse link
G Gata4 GATA binding protein 4 acts_upstream_of_or_within ISO MGI:3053826|MGI:3526854 (PMID:16940177) RGD PMID:16940177 NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636
JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO MGI:2447212|MGI:2684314 (PMID:16107537) RGD PMID:16107537 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
JBrowse link
G Sostdc1 sclerostin domain containing 1 acts_upstream_of ISO MGI:3604658 (PMID:22509524) RGD PMID:22509524 NCBI chr 6:53,051,336...53,055,510
Ensembl chr 6:53,051,354...53,055,579
JBrowse link
G Spdef SAM pointed domain containing ets transcription factor acts_upstream_of ISO MGI:4398888 (PMID:19759516) RGD PMID:19759516 NCBI chr20:5,771,440...5,785,893
Ensembl chr20:5,771,441...5,785,893
JBrowse link
epithelial cell maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1b1 aldo-keto reductase family 1 member B1 acts_upstream_of_or_within ISO MGI:2183239 (PMID:16449351) RGD PMID:16449351 NCBI chr 4:62,932,033...62,946,126
Ensembl chr 4:62,932,031...62,946,157
JBrowse link
G Cebpa CCAAT/enhancer binding protein alpha acts_upstream_of_or_within ISO MGI:2177133|MGI:2445716 (PMID:16467360) RGD PMID:16467360 NCBI chr 1:87,759,631...87,762,303
Ensembl chr 1:87,759,433...87,762,412
JBrowse link
G Epas1 endothelial PAS domain protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2663583 (PMID:12053176)
Ensembl
RGD
PMID:12053176 GO_REF:0000107 NCBI chr 6:7,790,236...7,871,717
Ensembl chr 6:7,790,647...7,871,228
JBrowse link
G Fem1b fem-1 homolog B acts_upstream_of_or_within ISO MGI:3811024 (PMID:18816836) RGD PMID:18816836 NCBI chr 8:63,265,301...63,278,577
Ensembl chr 8:63,265,301...63,278,577
JBrowse link
G Kcne1 potassium voltage-gated channel subfamily E regulatory subunit 1 acts_upstream_of_or_within ISO MGI:1857442 (PMID:11223304) RGD PMID:11223304 NCBI chr11:31,580,951...31,594,116
Ensembl chr11:31,580,742...31,593,901
JBrowse link
G Kdr kinase insert domain receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:12053176)
Ensembl
RGD
PMID:12053176 GO_REF:0000107 NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018
JBrowse link
G Pgr progesterone receptor acts_upstream_of_or_within ISO MGI:1857933 (PMID:14765981) RGD PMID:14765981 NCBI chr 8:6,072,673...6,131,552
Ensembl chr 8:6,072,673...6,131,344
JBrowse link
G Six3 SIX homeobox 3 involved_in ISO (MGI:5299935|PMID:22071110) RGD PMID:22071110 MGI:5299935 NCBI chr 6:9,039,017...9,043,336
Ensembl chr 6:9,036,434...9,053,301
JBrowse link
G Tfcp2l1 transcription factor CP2-like 1 acts_upstream_of_or_within ISO MGI:3707684 (PMID:17079272) RGD PMID:17079272 NCBI chr13:29,733,813...29,793,870
Ensembl chr13:29,733,840...29,793,870
JBrowse link
G Tmem79 transmembrane protein 79 involved_in ISS
ISO
GO_REF:0000024
(MGI:5518480|PMID:24060273)
UniProt
RGD
PMID:24060273 GO_REF:0000024 MGI:5518480 NCBI chr 2:173,798,267...173,803,151
Ensembl chr 2:173,798,267...173,803,046
JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of_or_within ISO MGI:1931047 (PMID:12053176) RGD PMID:12053176 NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
JBrowse link
epithelial cell maturation involved in prostate gland development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Esr2 estrogen receptor 2 acts_upstream_of_or_within ISO MGI:2152217 (PMID:15187231) RGD PMID:15187231 NCBI chr 6:94,858,438...94,909,630
Ensembl chr 6:94,809,547...94,908,919
JBrowse link
G Fem1b fem-1 homolog B acts_upstream_of_or_within ISO MGI:3811024 (PMID:18816836) RGD PMID:18816836 NCBI chr 8:63,265,301...63,278,577
Ensembl chr 8:63,265,301...63,278,577
JBrowse link
G Foxa1 forkhead box A1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2384404 (PMID:15987773)
Ensembl
RGD
PMID:15987773 GO_REF:0000107 NCBI chr 6:75,099,907...75,136,534
Ensembl chr 6:75,103,503...75,136,188
JBrowse link
G Hoxb13 homeo box B13 acts_upstream_of_or_within ISO MGI:2655242 (PMID:12668621) RGD PMID:12668621 NCBI chr10:81,160,498...81,162,777
Ensembl chr10:81,160,498...81,162,777
JBrowse link
epithelial cell maturation involved in salivary gland development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Xbp1 X-box binding protein 1 acts_upstream_of_or_within ISO MGI:2386788 (PMID:16362047) RGD PMID:16362047 NCBI chr14:80,390,629...80,395,713
Ensembl chr14:80,390,643...80,395,693
JBrowse link
epithelial cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam7 ADAM metallopeptidase domain 7 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5696682|PMID:26246218)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:26246218 GO_REF:0000024 GO_REF:0000107 MGI:5696682 NCBI chr15:42,833,796...42,882,201
Ensembl chr15:42,833,796...42,882,201
JBrowse link
G Ar androgen receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1922269 (PMID:21084446)
Ensembl
RGD
PMID:21084446 GO_REF:0000107 NCBI chr  X:63,104,771...63,273,934
Ensembl chr  X:63,104,771...63,273,925
JBrowse link
G Bcl11b BCL11 transcription factor B acts_upstream_of_or_within ISO MGI:3839578 (PMID:19251658) RGD PMID:19251658 NCBI chr 6:126,834,531...126,927,720
Ensembl chr 6:126,834,531...126,928,224
JBrowse link
G Cdh1 cadherin 1 acts_upstream_of_or_within ISO (PMID:22766025) RGD PMID:22766025 NCBI chr19:34,492,371...34,561,775
Ensembl chr19:34,492,371...34,561,775
JBrowse link
G Cgn cingulin acts_upstream_of_or_within ISO (PMID:24385485) RGD PMID:24385485 NCBI chr 2:182,308,389...182,335,747
Ensembl chr 2:182,308,714...182,334,645
JBrowse link
G Cldn3 claudin 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:5499697|PMID:22696678)
UniProt
RGD
PMID:22696678 GO_REF:0000024 MGI:5499697 NCBI chr12:21,708,538...21,710,010
Ensembl chr12:21,708,398...21,711,001
JBrowse link
G Dact2 dishevelled-binding antagonist of beta-catenin 2 involved_in ISO (MGI:4833906|PMID:20685821) RGD PMID:20685821 MGI:4833906 NCBI chr 1:55,181,023...55,191,026
Ensembl chr 1:55,181,024...55,191,096
JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within ISO MGI:3822451 (PMID:18794329) RGD PMID:18794329 NCBI chr13:30,670,792...30,770,213
Ensembl chr13:30,669,764...30,768,360
JBrowse link
G Fat1 FAT atypical cadherin 1 involved_in ISO MGI:2662293 (PMID:26114487) RGD PMID:26114487 NCBI chr16:47,177,253...47,296,261
Ensembl chr16:47,177,248...47,296,107
JBrowse link
G Flnb filamin B acts_upstream_of_or_within ISO (PMID:24012369) RGD PMID:24012369 NCBI chr15:16,961,999...17,095,059
Ensembl chr15:16,962,003...17,095,006
JBrowse link
G Grhl2 grainyhead-like transcription factor 2 involved_in ISO (PMID:25152456)
(MGI:5499697|PMID:22696678)
RGD PMID:22696678 PMID:25152456 MGI:5499697 NCBI chr 7:68,400,287...68,530,269
Ensembl chr 7:68,400,477...68,530,258
JBrowse link
G Hrh2 histamine receptor H 2 acts_upstream_of_or_within ISO MGI:2182949 (PMID:10862789) RGD PMID:10862789 NCBI chr17:10,366,004...10,407,791
Ensembl chr17:10,368,298...10,407,631
JBrowse link
G Ihh Indian hedgehog signaling molecule acts_upstream_of_or_within ISO MGI:1934258 (PMID:18582859) RGD PMID:18582859 NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532
JBrowse link
G Jmjd1c jumonji domain containing 1C acts_upstream_of_or_within ISO MGI:5544070 (PMID:24006281) RGD PMID:24006281 NCBI chr20:21,332,147...21,494,220
Ensembl chr20:21,332,147...21,463,122
JBrowse link
G Map3k1 mitogen-activated protein kinase kinase kinase 1 acts_upstream_of_or_within ISO MGI:2676654 (PMID:23201579) RGD PMID:23201579 NCBI chr 2:43,348,572...43,414,706
Ensembl chr 2:43,350,098...43,414,463
JBrowse link
G Mir205 microRNA 205 acts_upstream_of_or_within ISO (PMID:20103531) RGD PMID:20103531 NCBI chr13:105,035,878...105,035,985
Ensembl chr13:105,035,878...105,035,985
JBrowse link
G Palld palladin, cytoskeletal associated protein involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:24012369)
Ensembl
RGD
PMID:24012369 GO_REF:0000107 NCBI chr16:28,228,006...28,621,349
Ensembl chr16:27,981,354...28,621,337
JBrowse link
G Pkhd1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin involved_in ISO (PMID:32698519) RGD PMID:32698519 NCBI chr 9:22,547,396...23,037,443
Ensembl chr 9:22,549,513...23,037,381
JBrowse link
G Pof1b POF1B, actin binding protein involved_in ISO
IBA
(PMID:21940798)
GO_REF:0000033
RGD
GO_Central
PMID:21940798 GO_REF:0000033 NCBI chr  X:77,683,128...77,749,827
Ensembl chr  X:77,683,128...77,749,688
JBrowse link
G Rab25 RAB25, member RAS oncogene family involved_in ISO (MGI:5499697|PMID:22696678) RGD PMID:22696678 MGI:5499697 NCBI chr 2:174,000,323...174,006,422
Ensembl chr 2:174,000,323...174,006,422
JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within ISO MGI:2663662|MGI:2663669 (PMID:20016102) RGD PMID:20016102 NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251
JBrowse link
G Rilpl1 Rab interacting lysosomal protein-like 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:5507904|PMID:23264467)
UniProt
Ensembl
RGD
PMID:23264467 GO_REF:0000024 GO_REF:0000107 MGI:5507904 NCBI chr12:32,071,870...32,109,687
Ensembl chr12:32,071,693...32,109,938
JBrowse link
G Rilpl2 Rab interacting lysosomal protein-like 2 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:5507904|PMID:23264467)
UniProt
Ensembl
RGD
PMID:23264467 GO_REF:0000024 GO_REF:0000107 MGI:5507904 NCBI chr12:32,125,908...32,137,426
Ensembl chr12:32,125,886...32,137,418
JBrowse link
G Rnase10 ribonuclease A family member 10 acts_upstream_of_or_within ISO MGI:88064 (PMID:21084446) RGD PMID:21084446 NCBI chr15:24,226,687...24,229,149
Ensembl chr15:24,226,691...24,228,561
JBrowse link
G Sipa1 signal-induced proliferation-associated 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:202,938,532...202,950,672
Ensembl chr 1:202,938,580...202,950,591
JBrowse link
G Sipa1l3 signal-induced proliferation-associated 1 like 3 involved_in ISO
IBA
ISS
(PMID:26231217)
GO_REF:0000033
(MGI:5697095|PMID:26231217)
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:26231217 GO_REF:0000024 GO_REF:0000033 MGI:5697095 NCBI chr 1:84,618,714...84,825,956
Ensembl chr 1:84,618,719...84,703,802
JBrowse link
G Vsig1 V-set and immunoglobulin domain containing 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000002
MGI:5297726 (PMID:21991385)
InterPro
RGD
PMID:21991385 GO_REF:0000002 NCBI chr  X:104,607,031...104,640,128
Ensembl chr  X:104,607,031...104,639,249
JBrowse link
epithelial cell morphogenesis involved in placental branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grhl2 grainyhead-like transcription factor 2 acts_upstream_of_or_within ISO MGI:4340678 (PMID:25758223) RGD PMID:25758223 NCBI chr 7:68,400,287...68,530,269
Ensembl chr 7:68,400,477...68,530,258
JBrowse link
G Spint2 serine peptidase inhibitor, Kunitz type, 2 acts_upstream_of_or_within ISO MGI:1338881|MGI:2156187 (PMID:19592578) RGD PMID:19592578 NCBI chr 1:84,558,159...84,580,616
Ensembl chr 1:84,558,166...84,580,616
JBrowse link
G St14 ST14 transmembrane serine protease matriptase acts_upstream_of_or_within ISO MGI:1338031 (PMID:19592578) RGD PMID:19592578 NCBI chr 8:29,540,805...29,581,704
Ensembl chr 8:29,540,811...29,581,517
JBrowse link
establishment of blood-nerve barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen acts_upstream_of_or_within ISO MGI:2136636 (PMID:9734405) RGD PMID:9734405 NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977
JBrowse link
G Cldn1 claudin 1 IMP RGD PMID:22733753 RGD:11341802 NCBI chr11:74,421,569...74,436,728
Ensembl chr11:74,421,569...74,436,724
JBrowse link
G Dmd dystrophin acts_upstream_of_or_within ISO MGI:1856328 (PMID:12673830) RGD PMID:12673830 NCBI chr  X:47,272,324...49,504,219
Ensembl chr  X:47,272,331...49,504,207
JBrowse link
G Hapln2 hyaluronan and proteoglycan link protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4437572 (PMID:20181608)
Ensembl
RGD
PMID:20181608 GO_REF:0000107 NCBI chr 2:173,488,909...173,496,824
Ensembl chr 2:173,491,160...173,496,588
JBrowse link
G Ren renin NOT|acts_upstream_of_or_within ISO MGI:2136642 (PMID:10617578) RGD PMID:10617578 NCBI chr13:44,796,260...44,807,491
Ensembl chr13:44,796,091...44,807,489
JBrowse link
establishment of endothelial barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cldn5 claudin 5 involved_in ISO (PMID:24280217) RGD PMID:24280217 NCBI chr11:82,212,822...82,214,248
Ensembl chr11:82,211,475...82,214,992
JBrowse link
G Ednra endothelin receptor type A involved_in IEA
ISO
GO_REF:0000107
(PMID:27026367)
Ensembl
RGD
PMID:27026367 GO_REF:0000107 NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049
JBrowse link
G Ednrb endothelin receptor type B involved_in ISO (PMID:27026367) RGD PMID:27026367 NCBI chr15:80,640,839...80,672,115
Ensembl chr15:80,643,043...80,672,115
JBrowse link
G Ezr ezrin involved_in ISO
IEA
UniProtKB:P26038|UniProtKB:P35241 (PMID:23264465)
GO_REF:0000107
RGD
Ensembl
PMID:23264465 GO_REF:0000107 NCBI chr 1:46,967,961...47,011,505
Ensembl chr 1:46,967,658...47,011,505
JBrowse link
G F2rl1 F2R like trypsin receptor 1 involved_in ISO (PMID:20826780) RGD PMID:20826780 NCBI chr 2:26,772,274...26,785,226
Ensembl chr 2:26,772,278...26,785,226
JBrowse link
G Hpse heparanase involved_in IEA
ISO
GO_REF:0000107
(PMID:27026367)
Ensembl
RGD
PMID:27026367 GO_REF:0000107 NCBI chr14:8,896,593...8,937,011
Ensembl chr14:8,896,593...8,937,010
JBrowse link
G Icam1 intercellular adhesion molecule 1 involved_in ISO UniProtKB:Q96S97 (PMID:23264465) RGD PMID:23264465 NCBI chr 8:19,553,063...19,565,438
Ensembl chr 8:19,553,645...19,565,438
JBrowse link
G Marveld2 MARVEL domain containing 2 involved_in ISO (PMID:23073616) RGD PMID:23073616 NCBI chr 2:31,742,652...31,764,150
Ensembl chr 2:31,657,220...31,764,150
JBrowse link
G Msn moesin involved_in ISO
IEA
UniProtKB:P15311|UniProtKB:P35241 (PMID:23264465)
GO_REF:0000107
RGD
Ensembl
PMID:23264465 GO_REF:0000107 NCBI chr  X:60,996,043...61,064,011
Ensembl chr  X:60,995,951...61,065,628
JBrowse link
G Myadm myeloid-associated differentiation marker involved_in ISO
IEA
(PMID:23264465)
GO_REF:0000107
RGD
Ensembl
PMID:23264465 GO_REF:0000107 NCBI chr 1:65,864,180...65,874,701
Ensembl chr 1:65,864,173...65,874,035
JBrowse link
G Pde2a phosphodiesterase 2A involved_in IDA PMID:20139324 UniProt PMID:20139324 RGD:8553884 NCBI chr 1:155,823,590...155,915,434
Ensembl chr 1:155,813,180...155,915,434
JBrowse link
G Pde4d phosphodiesterase 4D involved_in IDA PMID:20139324 UniProt PMID:20139324 RGD:8553884 NCBI chr 2:40,014,933...41,529,190
Ensembl chr 2:40,019,933...41,525,884
JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 involved_in ISO
IEA
(PMID:7589563)
GO_REF:0000107
RGD
Ensembl
PMID:7589563 GO_REF:0000107 NCBI chr10:91,590,521...91,652,279
Ensembl chr10:91,590,521...91,652,116
JBrowse link
G Ppp1r16b protein phosphatase 1, regulatory subunit 16B involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:18586956)
(PMID:21907835)
GO_REF:0000033
RGD
GO_Central
PMID:18586956 PMID:21907835 GO_REF:0000033 NCBI chr 3:147,323,652...147,419,658
Ensembl chr 3:147,324,126...147,418,937
JBrowse link
G Rap1a RAP1A, member of RAS oncogene family involved_in ISO
ISS
(PMID:21840392)
GO_REF:0000024
RGD
UniProt
PMID:21840392 GO_REF:0000024 NCBI chr 2:193,208,631...193,286,513
Ensembl chr 2:193,208,635...193,286,501
JBrowse link
G Rap1b RAP1B, member of RAS oncogene family involved_in ISO
ISS
(PMID:21840392)
GO_REF:0000024
RGD
UniProt
PMID:21840392 GO_REF:0000024 NCBI chr 7:53,423,039...53,456,349
Ensembl chr 7:53,423,130...53,456,370
JBrowse link
G Rapgef1 Rap guanine nucleotide exchange factor 1 involved_in ISO (PMID:21840392) RGD PMID:21840392 NCBI chr 3:12,898,349...13,016,234
Ensembl chr 3:12,898,266...13,013,984
JBrowse link
G Rapgef2 Rap guanine nucleotide exchange factor 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:21840392)
UniProt
RGD
PMID:21840392 GO_REF:0000024 NCBI chr 2:164,207,513...164,322,157
Ensembl chr 2:164,207,513...164,244,247
JBrowse link
G Rapgef3 Rap guanine nucleotide exchange factor 3 involved_in ISO
IEA
ISS
(PMID:21840392)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:21840392 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:128,875,772...128,898,203
Ensembl chr 7:128,875,773...128,898,521
JBrowse link
G Rdx radixin involved_in ISO UniProtKB:P15311|UniProtKB:P26038 (PMID:23264465) RGD PMID:23264465 NCBI chr 8:52,379,494...52,437,673
Ensembl chr 8:52,379,494...52,437,678
JBrowse link
G Robo4 roundabout guidance receptor 4 involved_in ISO
IEA
(PMID:30455415)
GO_REF:0000107
RGD
Ensembl
PMID:30455415 GO_REF:0000107 NCBI chr 8:37,119,953...37,133,887
Ensembl chr 8:37,119,988...37,132,519
JBrowse link
G Sox18 SRY-box transcription factor 18 involved_in ISO (PMID:18065521) RGD PMID:18065521 NCBI chr 3:168,785,488...168,787,290
Ensembl chr 3:168,785,490...168,787,290
JBrowse link
establishment of endothelial blood-brain barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1b ATP-binding cassette, sub-family B member 1B IMP RGD PMID:16850390 RGD:1598561 NCBI chr 4:25,242,761...25,325,194
Ensembl chr 4:25,242,798...25,325,199
JBrowse link
G Cldn3 claudin 3 involved_in ISO (MGI:6368952|PMID:12734665) RGD PMID:12734665 MGI:6368952 NCBI chr12:21,708,538...21,710,010
Ensembl chr12:21,708,398...21,711,001
JBrowse link
G Foxp3 forkhead box P3 IEP RGD PMID:31027862 RGD:38549575 NCBI chr  X:14,908,494...14,924,994
Ensembl chr  X:14,908,494...14,923,838
JBrowse link
establishment of endothelial intestinal barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07006111.1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr 1:202,534,573...202,536,183 JBrowse link
G Afdn afadin, adherens junction formation factor involved_in ISO (PMID:23885123) RGD PMID:23885123 NCBI chr 1:53,905,344...54,034,216
Ensembl chr 1:53,905,373...54,034,216
JBrowse link
G Cldn1 claudin 1 IMP RGD PMID:22684624 RGD:11341733 NCBI chr11:74,421,569...74,436,728
Ensembl chr11:74,421,569...74,436,724
JBrowse link
G F11r F11 receptor involved_in ISO
IBA
IEA
UniProtKB:Q9Y3L5 (PMID:23885123)
GO_REF:0000033
GO_REF:0000118
RGD
GO_Central
TreeGrafter
PMID:23885123 GO_REF:0000033 GO_REF:0000118 NCBI chr13:83,873,797...83,897,388
Ensembl chr13:83,873,797...83,897,402
JBrowse link
G Fasn fatty acid synthase involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3765070 (PMID:25565205)
Ensembl
RGD
PMID:25565205 GO_REF:0000107 NCBI chr10:106,072,093...106,090,259
Ensembl chr10:106,072,091...106,090,261
JBrowse link
G Icam1 intercellular adhesion molecule 1 IMP RGD PMID:10201790 RGD:11520782 NCBI chr 8:19,553,063...19,565,438
Ensembl chr 8:19,553,645...19,565,438
JBrowse link
G Mir874 microRNA 874 acts_upstream_of_or_within ISO (PMID:24462679) RGD PMID:24462679 NCBI chr17:6,620,649...6,620,724
Ensembl chr17:6,620,649...6,620,724
JBrowse link
G Myd88 MYD88, innate immune signal transduction adaptor acts_upstream_of_or_within ISO MGI:2385681 (PMID:22155109) RGD PMID:22155109 NCBI chr 8:119,074,439...119,078,508
Ensembl chr 8:119,074,437...119,079,415
JBrowse link
G Ptprs protein tyrosine phosphatase, receptor type, S involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2158734 (PMID:24385580)
Ensembl
RGD
PMID:24385580 GO_REF:0000107 NCBI chr 9:1,245,408...1,307,015
Ensembl chr 9:1,245,410...1,306,947
JBrowse link
G Rab1a RAB1A, member RAS oncogene family NOT|involved_in ISO (PMID:23885123) RGD PMID:23885123 NCBI chr14:94,422,219...94,448,799
Ensembl chr14:94,415,275...94,448,248
JBrowse link
G Rab1b RAB1B, member RAS oncogene family NOT|involved_in ISO (PMID:23885123) RGD PMID:23885123 NCBI chr 1:202,405,759...202,413,850
Ensembl chr 1:202,405,759...202,413,868
Ensembl chr  X:202,405,759...202,413,868
JBrowse link
G Rap2b RAP2B, member of RAS oncogene family NOT|involved_in ISO (PMID:23885123) RGD PMID:23885123 NCBI chr 2:145,599,714...145,600,265
Ensembl chr 2:145,599,116...145,603,069
JBrowse link
G Rap2c RAP2C, member of RAS oncogene family involved_in ISO UniProtKB:Q9Y624 (PMID:23885123) RGD PMID:23885123 NCBI chr  X:130,504,554...130,517,671
Ensembl chr  X:130,504,698...130,518,328
JBrowse link
G Rapgef2 Rap guanine nucleotide exchange factor 2 involved_in ISO (PMID:23885123) RGD PMID:23885123 NCBI chr 2:164,207,513...164,322,157
Ensembl chr 2:164,207,513...164,244,247
JBrowse link
G Rapgef6 Rap guanine nucleotide exchange factor 6 NOT|involved_in ISO (PMID:23885123) RGD PMID:23885123 NCBI chr10:38,655,854...38,824,227
Ensembl chr10:38,655,867...38,823,211
JBrowse link
G Tjp1 tight junction protein 1 involved_in ISO
IBA
IEA
(PMID:23885123)
GO_REF:0000033
GO_REF:0000118
RGD
GO_Central
TreeGrafter
PMID:23885123 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:118,849,838...119,094,492
Ensembl chr 1:118,849,838...119,094,432
JBrowse link
G Tjp2 tight junction protein 2 involved_in ISO
IBA
(PMID:23885123)
GO_REF:0000033
RGD
GO_Central
PMID:23885123 GO_REF:0000033 NCBI chr 1:221,709,745...221,838,291
Ensembl chr 1:221,709,745...221,838,295
JBrowse link
G Tjp3 tight junction protein 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:8,427,650...8,446,279
Ensembl chr 7:8,432,811...8,446,279
JBrowse link
establishment of epithelial cell apical/basal polarity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camsap3 calmodulin regulated spectrin-associated protein family, member 3 involved_in ISO (PMID:26715742), (PMID:27802168)
(MGI:5754645|PMID:26715742)
RGD PMID:26715742 PMID:27802168 MGI:5754645 NCBI chr12:1,643,062...1,666,685
Ensembl chr12:1,643,251...1,666,685
JBrowse link
G Cdc42 cell division cycle 42 involved_in ISS
ISO
GO_REF:0000024
(PMID:22891260)
UniProt
RGD
PMID:22891260 GO_REF:0000024 NCBI chr 5:149,555,069...149,593,239
Ensembl chr 5:149,553,724...149,593,111
JBrowse link
G Ezr ezrin NOT|involved_in ISO (PMID:22797597), (PMID:24862762) RGD PMID:22797597 PMID:24862762 NCBI chr 1:46,967,961...47,011,505
Ensembl chr 1:46,967,658...47,011,505
JBrowse link
G Foxf1 forkhead box F1 acts_upstream_of_or_within ISO MGI:1347479 (PMID:16439479) RGD PMID:16439479 NCBI chr19:49,153,949...49,157,741
Ensembl chr19:49,153,699...49,157,738
JBrowse link
G Ift20 intraflagellar transport 20 acts_upstream_of_or_within ISO MGI:3817268 (PMID:25605782) RGD PMID:25605782 NCBI chr10:63,432,597...63,438,125
Ensembl chr10:63,432,633...63,438,124
JBrowse link
G Lama1 laminin subunit alpha 1 acts_upstream_of_or_within ISO MGI:3530455 (PMID:15668394) RGD PMID:15668394 NCBI chr 9:107,692,770...107,816,847
Ensembl chr 9:107,692,770...107,817,478
JBrowse link
G Msn moesin involved_in ISO
IEA
(PMID:24862762)
GO_REF:0000107
RGD
Ensembl
PMID:24862762 GO_REF:0000107 NCBI chr  X:60,996,043...61,064,011
Ensembl chr  X:60,995,951...61,065,628
JBrowse link
G Myo9a myosin IXA involved_in IEA
IBA
ISO
ISS
GO_REF:0000107
GO_REF:0000033
GO_REF:0000118
(PMID:22891260)
GO_REF:0000024
Ensembl
GO_Central
TreeGrafter
RGD
UniProt
PMID:22891260 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:60,149,234...60,352,330
Ensembl chr 8:60,149,234...60,350,514
JBrowse link
G Nherf1 NHERF family PDZ scaffold protein 1 involved_in ISO (PMID:24862762) RGD PMID:24862762 NCBI chr10:100,403,189...100,420,290
Ensembl chr10:100,403,069...100,420,598
JBrowse link
G Ophn1 oligophrenin 1 involved_in ISO
ISS
(PMID:22891260)
GO_REF:0000024
RGD
UniProt
PMID:22891260 GO_REF:0000024 NCBI chr  X:63,599,746...63,976,678
Ensembl chr  X:63,603,042...63,976,633
JBrowse link
G Ptk7 protein tyrosine kinase 7 acts_upstream_of_or_within ISO MGI:3046905 (PMID:15229603) RGD PMID:15229603 NCBI chr 9:14,352,155...14,418,473
Ensembl chr 9:14,351,202...14,418,494
JBrowse link
G Rap2a RAP2A, member of RAS oncogene family NOT|involved_in ISO (PMID:22797597) RGD PMID:22797597 NCBI chr15:97,596,848...97,597,338
Ensembl chr15:97,596,020...97,624,138
JBrowse link
G Rhoa ras homolog family member A involved_in ISO
IEA
ISS
(PMID:22891260)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:22891260 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746
JBrowse link
G Sh3bp1 SH3-domain binding protein 1 involved_in ISO
ISS
(PMID:22891260)
GO_REF:0000024
RGD
UniProt
PMID:22891260 GO_REF:0000024 NCBI chr 7:110,457,626...110,470,201
Ensembl chr 7:110,457,710...110,470,201
JBrowse link
G Spag6l sperm associated antigen 6-like acts_upstream_of_or_within ISO MGI:2662475 (PMID:25333478) RGD PMID:25333478 NCBI chr11:84,173,628...84,269,374
Ensembl chr11:84,173,526...84,269,364
JBrowse link
G Syne4 spectrin repeat containing nuclear envelope family member 4 involved_in ISS
IEA
IBA
ISO
GO_REF:0000024
GO_REF:0000118
GO_REF:0000033
GO_REF:0000107
(MGI:4441244|PMID:19164528)
UniProt
TreeGrafter
GO_Central
Ensembl
RGD
PMID:19164528 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:4441244 NCBI chr 1:85,569,409...85,573,775
Ensembl chr 1:85,569,545...85,573,760
JBrowse link
G Tcf15 transcription factor 15 acts_upstream_of_or_within ISO MGI:1929775 (PMID:24038871) RGD PMID:24038871 NCBI chr 3:140,638,984...140,644,766
Ensembl chr 3:140,638,984...140,644,766
JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 acts_upstream_of_or_within ISO MGI:5140723 (PMID:25605782) RGD PMID:25605782 NCBI chr 6:118,198,186...118,252,422
Ensembl chr 6:118,198,201...118,252,418
JBrowse link
G Wnt5a Wnt family member 5A involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:101948 (PMID:25813538)
Ensembl
RGD
PMID:25813538 GO_REF:0000107 NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
JBrowse link
establishment of epithelial cell apical/basal polarity involved in camera-type eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fat1 FAT atypical cadherin 1 involved_in ISO MGI:2662293 (PMID:26114487) RGD PMID:26114487 NCBI chr16:47,177,253...47,296,261
Ensembl chr16:47,177,248...47,296,107
JBrowse link
establishment of Sertoli cell barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid4a AT-rich interaction domain 4A acts_upstream_of_or_within ISO MGI:2137512 (PMID:23487765) RGD PMID:23487765 NCBI chr 6:89,522,459...89,593,868
Ensembl chr 6:89,522,442...89,593,510
JBrowse link
G Arid4b AT-rich interaction domain 4B involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2444354 (PMID:23487765)
Ensembl
RGD
PMID:23487765 GO_REF:0000107 NCBI chr17:51,138,419...51,262,894
Ensembl chr17:51,138,535...51,262,906
JBrowse link
G Flna filamin A IMP RGD PMID:22872576 RGD:7207404 NCBI chr  X:152,007,758...152,034,266
Ensembl chr  X:152,007,758...152,031,052
JBrowse link
G Icam1 intercellular adhesion molecule 1 IDA RGD PMID:22976294 RGD:8547721 NCBI chr 8:19,553,063...19,565,438
Ensembl chr 8:19,553,645...19,565,438
JBrowse link
G Itgb1 integrin subunit beta 1 IEP RGD PMID:22872576 RGD:7207404 NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195
JBrowse link
G Rab13 RAB13, member RAS oncogene family involved_in IMP PMID:23419316 UniProt PMID:23419316 RGD:8554106 NCBI chr 2:175,674,894...175,680,043
Ensembl chr 2:175,675,005...175,680,036
JBrowse link
glandular epithelial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fasn fatty acid synthase involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3765070 (PMID:25565205)
Ensembl
RGD
PMID:25565205 GO_REF:0000107 NCBI chr10:106,072,093...106,090,259
Ensembl chr10:106,072,091...106,090,261
JBrowse link
G Muc2 mucin 2, oligomeric mucus/gel-forming acts_upstream_of_or_within ISO MGI:2183923 (PMID:11872843) RGD PMID:11872843 NCBI chr 1:196,799,494...196,831,740
Ensembl chr 1:196,799,517...196,831,756
JBrowse link
G Rara retinoic acid receptor, alpha acts_upstream_of_or_within ISO MGI:97858 (PMID:7607067) RGD PMID:7607067 NCBI chr10:83,883,490...83,928,932
Ensembl chr10:83,893,384...83,928,142
JBrowse link
G Rarb retinoic acid receptor, beta acts_upstream_of_or_within ISO MGI:97858 (PMID:7607067) RGD PMID:7607067 NCBI chr15:8,700,533...9,051,288
Ensembl chr15:8,406,492...9,051,288
JBrowse link
G Rarg retinoic acid receptor, gamma acts_upstream_of_or_within ISO MGI:97856|MGI:97857 (PMID:7607067) RGD PMID:7607067 NCBI chr 7:133,367,833...133,390,301
Ensembl chr 7:133,367,833...133,390,177
JBrowse link
G Slc9a4 solute carrier family 9 member A4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3579458 (PMID:15684419)
Ensembl
RGD
PMID:15684419 GO_REF:0000107 NCBI chr 9:42,825,334...42,879,729
Ensembl chr 9:42,825,064...42,879,422
JBrowse link
G Spdef SAM pointed domain containing ets transcription factor acts_upstream_of_or_within ISO MGI:4410321 (PMID:19549527) RGD PMID:19549527 NCBI chr20:5,771,440...5,785,893
Ensembl chr20:5,771,441...5,785,893
JBrowse link
glandular epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav1 caveolin 1 involved_in
acts_upstream_of
IEA
ISO
GO_REF:0000107
MGI:2180364 (PMID:12388746)
Ensembl
RGD
PMID:12388746 GO_REF:0000107 NCBI chr 4:45,640,624...45,673,708
Ensembl chr 4:45,634,918...45,673,705
JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within ISO MGI:2148567 (PMID:15131783) RGD PMID:15131783 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (PMID:29700203) RGD PMID:29700203 NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357
JBrowse link
G Gata2 GATA binding protein 2 acts_upstream_of_or_within ISO MGI:2179995|MGI:3628639 (PMID:16543408) RGD PMID:16543408 NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761
JBrowse link
G Gcm2 glial cells missing transcription factor 2 acts_upstream_of_or_within ISO MGI:1889069 (PMID:17382312) RGD PMID:17382312 NCBI chr17:23,652,637...23,661,754
Ensembl chr17:23,652,637...23,661,754
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha acts_upstream_of_or_within ISO MGI:2386679 (PMID:12620994) RGD PMID:12620994 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
JBrowse link
G Il31ra interleukin 31 receptor A acts_upstream_of_or_within ISO MGI:3717594 (PMID:19414760) RGD PMID:19414760 NCBI chr 2:44,118,748...44,189,943
Ensembl chr 2:44,122,624...44,183,767
JBrowse link
G Klf4 KLF transcription factor 4 acts_upstream_of_or_within ISO MGI:2183917|MGI:3045749 (PMID:17060454) RGD PMID:17060454 NCBI chr 5:70,278,843...70,283,751
Ensembl chr 5:70,278,972...70,283,602
JBrowse link
G Nfib nuclear factor I/B acts_upstream_of_or_within ISO MGI:3530139 (PMID:25403566) RGD PMID:25403566 NCBI chr 5:96,759,208...96,974,001
Ensembl chr 5:96,764,653...96,975,479
JBrowse link
G Pax6 paired box 6 acts_upstream_of ISO MGI:1856158 (PMID:16080917) RGD PMID:16080917 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of ISO MGI:2429649 (PMID:17681175) RGD PMID:17681175 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
JBrowse link
G Yap1 Yes1 associated transcriptional regulator involved_in
acts_upstream_of
IEA
ISO
GO_REF:0000107
(PMID:17980593)
Ensembl
RGD
PMID:17980593 GO_REF:0000107 NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010
JBrowse link
glandular epithelial cell maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlha15 basic helix-loop-helix family, member a15 acts_upstream_of_or_within ISO (PMID:15024058) RGD PMID:15024058 NCBI chr12:10,420,465...10,424,641
Ensembl chr12:10,420,467...10,424,713
JBrowse link
G Fzd5 frizzled class receptor 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:15778706)
Ensembl
RGD
PMID:15778706 GO_REF:0000107 NCBI chr 9:66,113,096...66,120,276
Ensembl chr 9:66,113,112...66,121,457
JBrowse link
G Gata2 GATA binding protein 2 acts_upstream_of_or_within ISO MGI:2179995|MGI:3628639 (PMID:16543408) RGD PMID:16543408 NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761
JBrowse link
G Gpat4 glycerol-3-phosphate acyltransferase 4 acts_upstream_of_or_within ISO MGI:3624276 (PMID:16449762) RGD PMID:16449762 NCBI chr16:68,819,031...68,852,903
Ensembl chr16:68,819,079...68,852,901
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2384429 (PMID:20808783)
Ensembl
RGD
PMID:20808783 GO_REF:0000107 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
JBrowse link
G Pgr progesterone receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857933 (PMID:14765981)
Ensembl
RGD
PMID:14765981 GO_REF:0000107 NCBI chr 8:6,072,673...6,131,552
Ensembl chr 8:6,072,673...6,131,344
JBrowse link
G Xbp1 X-box binding protein 1 acts_upstream_of_or_within ISO MGI:2386788 (PMID:16362047) RGD PMID:16362047 NCBI chr14:80,390,629...80,395,713
Ensembl chr14:80,390,643...80,395,693
JBrowse link
glomerular mesangial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acta1 actin, alpha 1, skeletal muscle involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr19:51,883,709...51,886,735
Ensembl chr19:51,883,715...51,886,742
JBrowse link
G Acta2 actin alpha 2, smooth muscle involved_in ISO
IEA
(PMID:17464107)
GO_REF:0000107
RGD
Ensembl
PMID:17464107 GO_REF:0000107 NCBI chr 1:231,746,527...231,759,307
Ensembl chr 1:231,746,548...231,759,554
JBrowse link
G Actc1 actin, alpha, cardiac muscle 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:100,811,987...100,817,523
Ensembl chr 3:100,811,987...100,817,523
JBrowse link
G Actg2 actin gamma 2, smooth muscle involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:116,021,832...116,046,475
Ensembl chr 4:116,021,832...116,046,465
JBrowse link
G Foxc2 forkhead box C2 acts_upstream_of_or_within ISO MGI:1857740 (PMID:16498405) RGD PMID:16498405 NCBI chr19:49,186,034...49,188,736
Ensembl chr19:49,185,662...49,188,737
JBrowse link
G Gpr4 G protein-coupled receptor 4 acts_upstream_of_or_within ISO MGI:3700206 (PMID:17145776) RGD PMID:17145776 NCBI chr 1:78,865,376...78,877,126
Ensembl chr 1:78,865,409...78,876,599
JBrowse link
G Notch1 notch receptor 1 involved_in ISO (MGI:3576186|PMID:15821257) RGD PMID:15821257 MGI:3576186 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
JBrowse link
glomerular parietal epithelial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxj1 forkhead box J1 involved_in ISO
IEA
(PMID:9530170)
GO_REF:0000107
RGD
Ensembl
PMID:9530170 GO_REF:0000107 NCBI chr10:101,566,299...101,570,370
Ensembl chr10:101,566,304...101,570,237
JBrowse link
glomerular parietal epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd24 CD24 molecule involved_in ISO
ISS
(PMID:19092120)
GO_REF:0000024
RGD
UniProt
PMID:19092120 GO_REF:0000024 NCBI chr20:47,074,353...47,079,662
Ensembl chr20:47,073,512...47,079,662
JBrowse link
G Prom1 prominin 1 involved_in ISO (PMID:19092120) RGD PMID:19092120 NCBI chr14:66,989,545...67,094,534
Ensembl chr14:66,990,160...67,094,527
JBrowse link
granulosa cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Capn5 calpain 5 IEP RGD PMID:19415717 RGD:2313170 NCBI chr 1:152,416,252...152,472,923
Ensembl chr 1:152,416,252...152,472,923
JBrowse link
G Cyp11a1 cytochrome P450, family 11, subfamily a, polypeptide 1 IEP RGD PMID:2176216 RGD:632561 NCBI chr 8:58,422,807...58,434,342
Ensembl chr 8:58,404,669...58,434,338
JBrowse link
G Foxl2 forkhead box L2 acts_upstream_of_or_within ISO MGI:3029503 (PMID:14736745) RGD PMID:14736745 NCBI chr 8:99,512,971...99,514,500
Ensembl chr 8:99,513,303...99,514,427
JBrowse link
hair cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlx3 distal-less homeobox 3 involved_in ISO MGI:3813130|MGI:3813133 (PMID:18684741) RGD PMID:18684741 NCBI chr10:80,064,489...80,069,891
Ensembl chr10:80,064,489...80,069,872
JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit involved_in
acts_upstream_of_or_within
ISO (PMID:11335038)
MGI:2183949 (PMID:17020410)
RGD PMID:11335038 PMID:17020410 NCBI chr 1:79,033,342...79,047,102
Ensembl chr 1:79,033,326...79,047,102
JBrowse link
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit involved_in ISO
IBA
IEA
(PMID:11335038)
GO_REF:0000033
GO_REF:0000118
RGD
GO_Central
TreeGrafter
PMID:11335038 GO_REF:0000033 GO_REF:0000118 NCBI chr18:23,883,613...23,914,326
Ensembl chr18:23,883,580...23,914,329
JBrowse link
G Hes1 hes family bHLH transcription factor 1 IMP RGD PMID:11023859 RGD:9685386 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
JBrowse link
G Lamc1 laminin subunit gamma 1 involved_in ISO MGI:2683482 (PMID:27234308) RGD PMID:27234308 NCBI chr13:65,374,372...65,501,492
Ensembl chr13:65,374,372...65,501,492
JBrowse link
G Ush2a usherin involved_in ISO (MGI:5430895|PMID:16301217) RGD PMID:16301217 MGI:5430895 NCBI chr13:99,837,445...100,503,935
Ensembl chr13:99,837,445...100,503,922
JBrowse link
hepatoblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ggt1 gamma-glutamyltransferase 1 IEP RGD PMID:10934156 RGD:14701049 NCBI chr20:13,074,695...13,104,095
Ensembl chr20:13,074,700...13,108,442
JBrowse link
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within ISO MGI:3721426 (PMID:17580084) RGD PMID:17580084 NCBI chr 1:235,190,455...235,196,042
Ensembl chr 1:235,190,455...235,196,042
JBrowse link
G Hnf1b HNF1 homeobox B involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857856 (PMID:18635606)
Ensembl
RGD
PMID:18635606 GO_REF:0000107 NCBI chr10:68,735,894...68,789,888
Ensembl chr10:68,735,894...68,789,888
JBrowse link
G Tbx3 T-box transcription factor 3 acts_upstream_of ISO MGI:3769504 (PMID:18356246) RGD PMID:18356246 NCBI chr12:36,879,924...36,894,849
Ensembl chr12:36,881,445...36,893,708
JBrowse link
hepatocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa1 annexin A1 involved_in IEP
IEA
GO_REF:0000118 TreeGrafter
RGD
PMID:11668598 GO_REF:0000118, RGD:2306909 NCBI chr 1:217,861,175...217,877,205
Ensembl chr 1:217,861,175...217,877,343
JBrowse link
G Cps1 carbamoyl-phosphate synthase 1 IEP RGD PMID:12939595 RGD:4144098 NCBI chr 9:68,614,153...68,737,037
Ensembl chr 9:68,614,153...68,737,033
JBrowse link
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 IEP RGD PMID:17574236 RGD:2306655 NCBI chr 8:58,096,021...58,102,130
Ensembl chr 8:58,096,077...58,102,125
JBrowse link
G E2f7 E2F transcription factor 7 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:5449497|PMID:23064266)
UniProt
Ensembl
RGD
PMID:23064266 GO_REF:0000024 GO_REF:0000107 MGI:5449497 NCBI chr 7:46,150,533...46,192,739
Ensembl chr 7:46,151,293...46,192,734
JBrowse link
G E2f8 E2F transcription factor 8 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5449497|PMID:23064266), (MGI:5449498|PMID:23064264)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:23064264 PMID:23064266 GO_REF:0000024 GO_REF:0000107 MGI:5449497 MGI:5449498 NCBI chr 1:98,565,717...98,584,265
Ensembl chr 1:98,565,717...98,584,098
JBrowse link
G Foxh1 forkhead box H1 IEP RGD PMID:22715131 RGD:155791677 NCBI chr 7:108,387,969...108,391,566
Ensembl chr 7:108,387,969...108,390,049
JBrowse link
G Frzb frizzled-related protein acts_upstream_of ISO (PMID:19562671) RGD PMID:19562671 NCBI chr 3:65,332,274...65,365,208
Ensembl chr 3:65,332,277...65,365,208
JBrowse link
G Ggt1 gamma-glutamyltransferase 1 IEP RGD PMID:10934156 RGD:14701049 NCBI chr20:13,074,695...13,104,095
Ensembl chr20:13,074,700...13,108,442
JBrowse link
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within ISO MGI:2448661 (PMID:11027604) RGD PMID:11027604 NCBI chr 1:235,190,455...235,196,042
Ensembl chr 1:235,190,455...235,196,042
JBrowse link
G Hnf1b HNF1 homeobox B IEP RGD PMID:18286537 RGD:2312718 NCBI chr10:68,735,894...68,789,888
Ensembl chr10:68,735,894...68,789,888
JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha IEP RGD PMID:19621519 RGD:12904750 NCBI chr 3:152,186,787...152,248,320
Ensembl chr 3:152,186,787...152,248,320
JBrowse link
G Itga2 integrin subunit alpha 2 IEP RGD PMID:16458388 RGD:2307397 NCBI chr 2:46,520,345...46,621,487
Ensembl chr 2:46,523,948...46,621,481
JBrowse link
G Krt18 keratin 18 IEP RGD PMID:24340101 PMID:28941653 RGD:27226712, RGD:27226713 NCBI chr 7:133,157,486...133,161,162
Ensembl chr 7:133,157,475...133,161,166
JBrowse link
G Pck1 phosphoenolpyruvate carboxykinase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:161,930,256...161,936,205
Ensembl chr 3:161,930,256...161,936,191
JBrowse link
G Pck2 phosphoenolpyruvate carboxykinase 2 (mitochondrial) involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr15:29,027,891...29,036,729
Ensembl chr15:29,027,894...29,037,283
JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (PMID:15232737)
(MGI:4367343|PMID:15232737)
RGD PMID:15232737 MGI:4367343 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183
JBrowse link
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 acts_upstream_of_or_within ISO MGI:2387974 (PMID:16138077) RGD PMID:16138077 NCBI chr20:12,741,164...12,763,616
Ensembl chr20:12,741,477...12,763,620
JBrowse link
G Taf10 TATA-box binding protein associated factor 10 acts_upstream_of_or_within ISO MGI:2176946|MGI:3606185 (PMID:18722179) RGD PMID:18722179 NCBI chr 1:160,095,108...160,096,401
Ensembl chr 1:160,095,108...160,096,376
JBrowse link
G Wnt1 Wnt family member 1 IMP RGD PMID:20413689 RGD:2326223 NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651
JBrowse link
inhibition of neuroepithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1932522|MGI:3044907 (PMID:16495313)
Ensembl
RGD
PMID:16495313 GO_REF:0000107 NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
JBrowse link
G Hes1 hes family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:2149672 (PMID:10952889) RGD PMID:10952889 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
JBrowse link
G Jag1 jagged canonical Notch ligand 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:15064243)
Ensembl
RGD
PMID:15064243 GO_REF:0000107 NCBI chr 3:124,406,783...124,442,220
Ensembl chr 3:124,406,794...124,442,209
JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:2180793 (PMID:16678814) RGD PMID:16678814 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837
JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO (PMID:15064243) RGD PMID:15064243 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
JBrowse link
inner ear auditory receptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh1 atonal bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:2155983|MGI:2155984 (PMID:11973280), (PMID:15543141)
(PMID:19154718)
RGD PMID:11973280 PMID:15543141 PMID:19154718 NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154
JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:95524 (PMID:17555714)
Ensembl
RGD
PMID:17555714 GO_REF:0000107 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
JBrowse link
G Cdh23 cadherin-related 23 acts_upstream_of_or_within ISO MGI:1856228 (PMID:12121736) RGD PMID:12121736 NCBI chr20:28,240,643...28,622,490
Ensembl chr20:28,240,645...28,622,419
JBrowse link
G Clrn2 clarin 2 acts_upstream_of_or_within ISO MGI:5792002|MGI:6458758 (PMID:31448880) RGD PMID:31448880 NCBI chr14:65,656,029...65,666,325
Ensembl chr14:65,656,550...65,666,193
JBrowse link
G Cux1 cut-like homeobox 1 acts_upstream_of_or_within ISO MGI:2388352 (PMID:11544187) RGD PMID:11544187 NCBI chr12:20,107,062...20,425,868
Ensembl chr12:20,107,311...20,425,866
JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in
acts_upstream_of
IEA
ISO
GO_REF:0000107
MGI:1932522|MGI:3044907 (PMID:16495313)
Ensembl
RGD
PMID:16495313 GO_REF:0000107 NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
JBrowse link
G Fgf2 fibroblast growth factor 2 acts_upstream_of ISO (PMID:12417662) RGD PMID:12417662 NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221
JBrowse link
G Fgf20 fibroblast growth factor 20 acts_upstream_of_or_within ISO (PMID:18524904) RGD PMID:18524904 NCBI chr16:52,030,549...52,038,201
Ensembl chr16:52,010,194...52,038,204
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of
acts_upstream_of_or_within
ISO MGI:1931521 (PMID:17117437)
MGI:1931521|MGI:88180 (PMID:17117437), (PMID:17555714), (PMID:17557302)
RGD PMID:17117437 PMID:17555714 PMID:17557302 NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341
JBrowse link
G Gfi1 growth factor independent 1 transcriptional repressor acts_upstream_of_or_within ISO MGI:2449921 (PMID:12441305) RGD PMID:12441305 NCBI chr14:2,040,576...2,056,874
Ensembl chr14:2,042,434...2,051,814
JBrowse link
G Grxcr1 glutaredoxin and cysteine rich domain containing 1 acts_upstream_of_or_within ISO MGI:2681910 (PMID:12405956) RGD PMID:12405956 NCBI chr14:40,004,169...40,126,571
Ensembl chr14:40,004,169...40,126,571
JBrowse link
G Gsdme gasdermin E acts_upstream_of_or_within ISO MGI:3583715 (PMID:16023581) RGD PMID:16023581 NCBI chr 4:79,258,799...79,321,129
Ensembl chr 4:79,257,804...79,320,806
JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of
IEA
ISO
GO_REF:0000107
MGI:104876|MGI:1341800 (PMID:21300049)
Ensembl
RGD
PMID:21300049 GO_REF:0000107 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
JBrowse link
G Hes5 hes family bHLH transcription factor 5 acts_upstream_of ISO MGI:104853|MGI:1341800 (PMID:21300049) RGD PMID:21300049 NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001
JBrowse link
G Jag1 jagged canonical Notch ligand 1 acts_upstream_of_or_within
involved_in
IMP
ISO
IEA
MGI:1932522|MGI:3623344 (PMID:16495313)
GO_REF:0000107
RGD
Ensembl
PMID:16495313 PMID:10887092 GO_REF:0000107, RGD:1582345 NCBI chr 3:124,406,783...124,442,220
Ensembl chr 3:124,406,794...124,442,209
JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 acts_upstream_of_or_within ISO MGI:3050114 (PMID:15328414), (PMID:17074442) RGD PMID:15328414 PMID:17074442 NCBI chr15:302,480...1,007,675
Ensembl chr15:302,214...1,001,198
JBrowse link
G Mcoln3 mucolipin TRP cation channel 3 acts_upstream_of_or_within ISO MGI:1856230 (PMID:12403827) RGD PMID:12403827 NCBI chr 2:235,008,716...235,042,885
Ensembl chr 2:234,966,010...235,043,047
JBrowse link
G Myo6 myosin VI involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:1856555 (PMID:10525338), (PMID:5980120), (PMID:7493015)
GO_Central
RGD
PMID:5980120 PMID:7493015 PMID:10525338 GO_REF:0000033 NCBI chr 8:81,087,157...81,242,022
Ensembl chr 8:81,087,139...81,239,292
JBrowse link
G Myo7a myosin VIIA acts_upstream_of_or_within ISO MGI:1860092|MGI:2155422|MGI:3511858 (PMID:11753415), (PMID:12121736), (PMID:15389316) RGD PMID:11753415 PMID:12121736 PMID:15389316 NCBI chr 1:152,342,611...152,414,171
Ensembl chr 1:152,344,448...152,414,157
JBrowse link
G Pcdh15 protocadherin related 15 acts_upstream_of_or_within ISO MGI:1856394 (PMID:16481439) RGD PMID:16481439 NCBI chr20:13,997,094...15,496,446
Ensembl chr20:13,963,565...15,494,719
JBrowse link
G Pls3 plastin 3 IEP RGD PMID:12378542 RGD:731234 NCBI chr  X:111,589,193...111,683,908
Ensembl chr  X:111,589,254...111,683,891
JBrowse link
G Pou4f3 POU class 4 homeobox 3 acts_upstream_of_or_within ISO MGI:1857425|MGI:2176270 (PMID:12585968), (PMID:8637595) RGD PMID:8637595 PMID:12585968 NCBI chr18:34,390,205...34,392,797
Ensembl chr18:34,390,205...34,392,797
JBrowse link
G Ush1c USH1 protein network component harmonin involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:2651858|MGI:2651859 (PMID:14519688)
GO_Central
RGD
PMID:14519688 GO_REF:0000033 NCBI chr 1:96,695,303...96,743,671
Ensembl chr 1:96,695,307...96,743,671
JBrowse link
G Ush2a usherin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3702040 (PMID:17360538)
Ensembl
RGD
PMID:17360538 GO_REF:0000107 NCBI chr13:99,837,445...100,503,935
Ensembl chr13:99,837,445...100,503,922
JBrowse link
intestinal epithelial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1galt1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3714051 (PMID:21383503)
Ensembl
RGD
PMID:21383503 GO_REF:0000107 NCBI chr 4:35,930,981...35,966,100
Ensembl chr 4:35,928,104...35,961,831
JBrowse link
G Cdh1 cadherin 1 acts_upstream_of_or_within ISO (PMID:22766025) RGD PMID:22766025 NCBI chr19:34,492,371...34,561,775
Ensembl chr19:34,492,371...34,561,775
JBrowse link
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO MGI:108015 (PMID:21307095) RGD PMID:21307095 NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
JBrowse link
G Il6st interleukin 6 cytokine family signal transducer involved_in ISO
IEA
(PMID:25731159)
GO_REF:0000107
(MGI:5629863|PMID:25731159)
RGD
Ensembl
PMID:25731159 GO_REF:0000107 MGI:5629863 NCBI chr 2:44,065,979...44,106,255
Ensembl chr 2:44,066,130...44,109,936
JBrowse link
G Klf5 KLF transcription factor 5 acts_upstream_of_or_within ISO MGI:3806635 (PMID:23266329) RGD PMID:23266329 NCBI chr15:76,060,320...76,079,445
Ensembl chr15:76,064,258...76,079,445
JBrowse link
G Mir3545 microRNA 3545 acts_upstream_of_or_within ISO (PMID:21307095) RGD PMID:21307095 NCBI chr 6:131,199,542...131,199,656
Ensembl chr 6:131,199,542...131,199,656
JBrowse link
G Mir7-1 microRNA 7-1 acts_upstream_of_or_within ISO (PMID:21307095) RGD PMID:21307095 NCBI chr17:6,273,264...6,273,360
Ensembl chr17:6,273,264...6,273,360
JBrowse link
G Nkx3-2 NK3 homeobox 2 acts_upstream_of_or_within ISO MGI:2177178 (PMID:21307095) RGD PMID:21307095 NCBI chr14:69,183,795...69,186,182
Ensembl chr14:69,183,820...69,186,061
JBrowse link
G Prdm1 PR/SET domain 1 acts_upstream_of_or_within ISO MGI:3605483|MGI:3605621 (PMID:21670299) RGD PMID:21670299 NCBI chr20:47,959,858...47,981,488
Ensembl chr20:47,959,858...47,981,488
JBrowse link
G Spdef SAM pointed domain containing ets transcription factor acts_upstream_of_or_within ISO MGI:4410321 (PMID:19549527) RGD PMID:19549527 NCBI chr20:5,771,440...5,785,893
Ensembl chr20:5,771,441...5,785,893
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase involved_in ISO (PMID:25731159)
(MGI:5629863|PMID:25731159)
RGD PMID:25731159 MGI:5629863 NCBI chr 3:146,091,969...146,139,492
Ensembl chr 3:146,091,841...146,139,476
JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase acts_upstream_of_or_within ISO MGI:4391656 (PMID:23726973) RGD PMID:23726973 NCBI chr 4:159,927,136...159,946,077
Ensembl chr 4:159,927,139...159,946,029
JBrowse link
G Yap1 Yes1 associated transcriptional regulator involved_in ISO
IEA
(MGI:5629863|PMID:25731159)
GO_REF:0000107
RGD
Ensembl
PMID:25731159 GO_REF:0000107 MGI:5629863 NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010
JBrowse link
G Yipf6 Yip1 domain family, member 6 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4839074 (PMID:22802641)
Ensembl
RGD
PMID:22802641 GO_REF:0000107 NCBI chr  X:64,039,602...64,051,715
Ensembl chr  X:64,040,952...64,054,702
JBrowse link
intestinal epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbfa2t2 CBFA2/RUNX1 partner transcriptional co-repressor 2 involved_in ISO (MGI:5629454|PMID:25398765) RGD PMID:25398765 MGI:5629454 NCBI chr 3:142,936,945...143,043,205
Ensembl chr 3:142,936,985...143,043,197
JBrowse link
G Cdx2 caudal type homeo box 2 involved_in ISO (MGI:5301472|PMID:22015720) RGD PMID:22015720 MGI:5301472 NCBI chr12:7,726,798...7,733,142
Ensembl chr12:7,726,798...7,733,142
JBrowse link
G Gata4 GATA binding protein 4 acts_upstream_of_or_within ISO (PMID:9566909) RGD PMID:9566909 NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636
JBrowse link
G Gata5 GATA binding protein 5 acts_upstream_of_or_within ISO (PMID:9566909) RGD PMID:9566909 NCBI chr 3:167,418,563...167,426,751
Ensembl chr 3:167,418,565...167,426,751
JBrowse link
G Gata6 GATA binding protein 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:9566909)
GO_REF:0000107
RGD
Ensembl
PMID:9566909 GO_REF:0000107 NCBI chr18:2,188,121...2,219,532
Ensembl chr18:2,188,121...2,219,532
JBrowse link
G Ptk6 protein tyrosine kinase 6 involved_in ISO (MGI:3640030|PMID:16782882) RGD PMID:16782882 MGI:3640030 NCBI chr 3:168,307,073...168,315,664
Ensembl chr 3:168,307,073...168,315,664
JBrowse link
G Sav1 salvador family WW domain containing protein 1 acts_upstream_of_or_within ISO MGI:3790763 (PMID:18369314) RGD PMID:18369314 NCBI chr 6:88,478,536...88,500,121
Ensembl chr 6:88,478,539...88,499,968
JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of ISO MGI:2429649 (PMID:17681175) RGD PMID:17681175 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
JBrowse link
G Yap1 Yes1 associated transcriptional regulator acts_upstream_of ISO (PMID:17980593) RGD PMID:17980593 NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010
JBrowse link
intestinal epithelial cell maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdkn1a cyclin-dependent kinase inhibitor 1A IEP RGD PMID:20466941 RGD:8662316 NCBI chr20:7,149,177...7,159,727
Ensembl chr20:7,149,217...7,159,585
JBrowse link
G Fzd5 frizzled class receptor 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:15778706)
Ensembl
RGD
PMID:15778706 GO_REF:0000107 NCBI chr 9:66,113,096...66,120,276
Ensembl chr 9:66,113,112...66,121,457
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2384429 (PMID:20808783)
Ensembl
RGD
PMID:20808783 GO_REF:0000107 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
JBrowse link
G Hoxa5 homeo box A5 acts_upstream_of_or_within ISO MGI:2150397 (PMID:10564089) RGD PMID:10564089 NCBI chr 4:81,302,341...81,306,234
Ensembl chr 4:81,302,353...81,306,234
JBrowse link
G Tmigd1 transmembrane and immunoglobulin domain containing 1 acts_upstream_of_or_within ISO MGI:6506201 (PMID:33129760) RGD PMID:33129760 NCBI chr10:61,739,071...61,751,025
Ensembl chr10:61,736,462...61,751,025
JBrowse link
G Tyms thymidylate synthetase IEP RGD PMID:1260861 RGD:2317427 NCBI chr 9:113,313,454...113,329,551
Ensembl chr 9:113,313,452...113,329,536
JBrowse link
keratinization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G 2210017I01Rik RIKEN cDNA 2210017I01 gene involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr 2:178,182,848...178,183,135 JBrowse link
G AABR07001416.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 7:132,758,366...132,762,047 JBrowse link
G AABR07033579.3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr11:28,294,843...28,295,058 JBrowse link
G Abca12 ATP binding cassette subfamily A member 12 acts_upstream_of_or_within ISO MGI:3528440|MGI:3809668|MGI:4461044 (PMID:18632686), (PMID:18802465), (PMID:18957418) RGD PMID:18632686 PMID:18802465 PMID:18957418 NCBI chr 9:72,822,661...72,995,748
Ensembl chr 9:72,823,350...72,996,049
JBrowse link
G Cdh3 cadherin 3 involved_in ISO (PMID:22696062) RGD PMID:22696062 NCBI chr19:34,393,596...34,444,084
Ensembl chr19:34,393,727...34,444,084
JBrowse link
G ENSRNOG00000071041 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr11:28,310,977...28,311,204 JBrowse link
G Il1a interleukin 1 alpha IDA RGD PMID:20385541 RGD:4142790 NCBI chr 3:116,526,601...116,537,055
Ensembl chr 3:116,526,604...116,536,822
JBrowse link
G Ivl involucrin involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:178,146,694...178,160,807
Ensembl chr 2:178,147,061...178,149,100
JBrowse link
G Kazn kazrin, periplakin interacting protein involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:154,392,793...155,381,567
Ensembl chr 5:154,392,793...154,779,074
JBrowse link
G Krt1 keratin 1 involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 7:132,976,618...132,981,844
Ensembl chr 7:132,976,620...132,981,844
JBrowse link
G Krt16 keratin 16 involved_in ISO (MGI:5613485|PMID:11029038) RGD PMID:11029038 MGI:5613485 NCBI chr10:85,168,357...85,171,816
Ensembl chr10:85,066,802...85,171,799
JBrowse link
G Krt17 keratin 17 acts_upstream_of_or_within ISO MGI:1100845|MGI:1333768 (PMID:15601842) RGD PMID:15601842 NCBI chr10:85,178,673...85,183,392
Ensembl chr10:85,178,675...85,183,392
JBrowse link
G Krt2 keratin 2 involved_in ISO
IBA
IEA
(PMID:12598329)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:12598329 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:132,940,879...132,948,031
Ensembl chr 7:132,940,862...132,947,963
JBrowse link
G Krt4 keratin 4 involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 7:133,046,067...133,052,027
Ensembl chr 7:133,046,515...133,052,019
JBrowse link
G Krt5 keratin 5 involved_in IBA
IEA
GO_REF:0000033
GO_REF:0000118
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 7:132,846,132...132,851,861
Ensembl chr 7:132,846,136...132,851,850
JBrowse link
G Krt6c keratin 6c involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:132,799,608...132,804,045
Ensembl chr 7:132,799,616...132,804,045
JBrowse link
G Krt7 keratin 7 involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 7:132,528,881...132,545,052
Ensembl chr 7:132,528,895...132,545,052
JBrowse link
G Krt71 keratin 71 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:132,873,532...132,898,975
Ensembl chr 7:132,873,540...132,882,325
JBrowse link
G Krt72 keratin 72 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:132,910,379...132,920,844
Ensembl chr 7:132,910,613...132,920,783
JBrowse link
G Krt73 keratin 73 involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 7:132,927,812...132,936,323
Ensembl chr 7:132,928,256...132,936,280
JBrowse link
G Krt75 keratin 75 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:132,687,101...132,697,360
Ensembl chr 7:132,688,237...132,697,345
JBrowse link
G Krt76 keratin 76 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:133,016,990...133,025,475
Ensembl chr 7:133,016,992...133,025,496
JBrowse link
G Krt77 keratin 77 involved_in IBA
IEA
GO_REF:0000033
GO_REF:0000118
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 7:132,989,727...133,002,087
Ensembl chr 7:132,989,717...133,002,101
JBrowse link
G Krt78 keratin 78 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:133,074,193...133,081,536
Ensembl chr 7:133,074,215...133,082,021
JBrowse link
G Krt79 keratin 79 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:133,056,710...133,067,750
Ensembl chr 7:133,056,709...133,067,705
JBrowse link
G Krt8 keratin 8 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 7:133,124,203...133,131,656
Ensembl chr 7:133,124,203...133,131,728
JBrowse link
G Krt80 keratin 80 involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 7:132,463,216...132,485,134
Ensembl chr 7:132,463,218...132,485,508
JBrowse link
G Krt81 keratin 81 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:132,577,112...132,582,238
Ensembl chr 7:132,576,492...132,582,170
JBrowse link
G Krt82 keratin 82 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:132,665,506...132,675,362
Ensembl chr 7:132,665,292...132,675,489
JBrowse link
G Krt83 keratin 83 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:132,604,180...132,610,869
Ensembl chr 7:132,604,128...132,610,799
JBrowse link
G Krt84 keratin 84 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:132,649,064...132,656,885
Ensembl chr 7:132,649,061...132,656,874
JBrowse link
G Krt85 keratin 85 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:132,630,184...132,637,061
Ensembl chr 7:132,630,058...132,637,049
JBrowse link
G Krt86 keratin 86 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:132,591,489...132,598,142
Ensembl chr 7:132,591,545...132,598,021
JBrowse link
G Krt87 keratin 87 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:132,547,388...132,555,005
Ensembl chr 7:132,548,141...132,554,978
JBrowse link
G Krt88 keratin 88 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 7:132,566,087...132,571,946
Ensembl chr 7:132,561,724...132,571,944
JBrowse link
G Krt90 keratin 90 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:132,677,994...132,686,634
Ensembl chr 7:132,677,751...132,686,759
JBrowse link
G Lce1b late cornified envelope 1B involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:178,255,351...178,257,533
Ensembl chr 2:178,256,213...178,257,985
JBrowse link
G Lce1e late cornified envelope 1E involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:178,462,100...178,463,433
Ensembl chr 2:178,462,100...178,463,433
JBrowse link
G Lce1f late cornified envelope 1F involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:178,305,786...178,307,372
Ensembl chr 2:178,305,786...178,307,372
JBrowse link
G Lce1fl1 late cornified envelope 1F like 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:178,344,421...178,345,204
Ensembl chr 2:178,344,834...178,345,193
JBrowse link
G Lce1g late cornified envelope 1G involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr 2:178,293,244...178,293,645 JBrowse link
G Lce1m late cornified envelope 1M involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:178,637,495...178,638,697
Ensembl chr 2:178,637,495...178,638,697
JBrowse link
G Lce3b late cornified envelope 3B involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:178,550,333...178,551,454
Ensembl chr 2:178,550,956...178,551,252
JBrowse link
G Lce3d late cornified envelope 3D involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:178,589,785...178,590,877
Ensembl chr 2:178,590,377...178,590,673
Ensembl chr 2:178,590,377...178,590,673
JBrowse link
G Lce3e late cornified envelope 3E involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:178,578,488...178,579,661
Ensembl chr 2:178,579,162...178,579,458
JBrowse link
G Lce3el1 late cornified envelope 3E like 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:178,561,990...178,562,532
Ensembl chr 2:178,561,990...178,562,286
JBrowse link
G Lce3el2 late cornified envelope 3E like 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:178,597,362...178,598,559
Ensembl chr 2:178,598,016...178,598,312
Ensembl chr 2:178,598,016...178,598,312
JBrowse link
G Lce3fl1 late cornified envelope 3F-like 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:178,615,562...178,616,788
Ensembl chr 2:178,616,227...178,616,523
JBrowse link
G LOC100364321 hypothetical protein LOC100364321 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043
G LOC100365213 keratin 6A-like involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118
G LOC102549828 late cornified envelope protein 1E-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:178,367,227...178,367,774
Ensembl chr 2:178,367,382...178,367,774
JBrowse link
G LOC102551936 late cornified envelope protein 1C-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:178,381,135...178,382,712
Ensembl chr 2:178,381,234...178,381,623
JBrowse link
G LOC102552128 late cornified envelope protein 1C-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:178,322,769...178,323,158
Ensembl chr 2:178,322,769...178,323,158
JBrowse link
G LOC102553726 keratin, type II cytoskeletal 6A-like involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 7:132,787,470...132,791,649
Ensembl chr 7:132,787,265...132,791,703
JBrowse link
G LOC108351864 late cornified envelope protein 1C-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043
G LOC120093742 keratin, type II cytoskeletal 6A-like involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 7:132,813,038...132,817,010
Ensembl chr 7:132,812,625...132,817,043
JBrowse link
G Sfn stratifin acts_upstream_of_or_within ISO MGI:1861121 (PMID:6174530) RGD PMID:6174530 NCBI chr 5:145,826,722...145,827,994
Ensembl chr 5:145,826,201...145,831,314
JBrowse link
G Sharpin SHANK-associated RH domain interactor acts_upstream_of_or_within ISO MGI:1856699 (PMID:7792947) RGD PMID:7792947 NCBI chr 7:108,070,681...108,075,012
Ensembl chr 7:108,070,687...108,074,955
JBrowse link
G Sprr1a small proline-rich protein 1A involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:178,055,096...178,057,012
Ensembl chr 2:178,055,096...178,057,063
JBrowse link
G Tgm1 transglutaminase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr15:29,191,039...29,206,000
Ensembl chr15:29,191,041...29,204,523
JBrowse link
G Tgm3 transglutaminase 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:117,228,661...117,264,078
Ensembl chr 3:117,228,661...117,264,075
JBrowse link
keratinocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl11b BCL11 transcription factor B acts_upstream_of_or_within ISO MGI:3839576|MGI:3839578 (PMID:19092943) RGD PMID:19092943 NCBI chr 6:126,834,531...126,927,720
Ensembl chr 6:126,834,531...126,928,224
JBrowse link
G Exph5 exophilin 5 involved_in ISO (PMID:23176819) RGD PMID:23176819 NCBI chr 8:53,698,825...53,775,371
Ensembl chr 8:53,698,852...53,773,169
JBrowse link
G Flnb filamin B acts_upstream_of_or_within ISO (PMID:24012369) RGD PMID:24012369 NCBI chr15:16,961,999...17,095,059
Ensembl chr15:16,962,003...17,095,006
JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:25547114)
Ensembl
RGD
PMID:25547114 GO_REF:0000107 NCBI chr 6:24,297,898...24,319,219
Ensembl chr 6:24,300,956...24,320,034
JBrowse link
G Ift74 intraflagellar transport 74 acts_upstream_of_or_within ISO (PMID:21703454) RGD PMID:21703454 NCBI chr 5:109,460,372...109,563,839
Ensembl chr 5:109,474,255...109,563,833
JBrowse link
G Kdf1 keratinocyte differentiation factor 1 acts_upstream_of_or_within ISO MGI:1891831|MGI:5559501 (PMID:24075906) RGD PMID:24075906 NCBI chr 5:145,744,753...145,758,150
Ensembl chr 5:145,745,099...145,755,878
JBrowse link
G Krt10 keratin 10 acts_upstream_of_or_within ISO MGI:96699 (PMID:24751727) RGD PMID:24751727 NCBI chr10:84,338,695...84,343,279
Ensembl chr10:84,338,706...84,343,701
JBrowse link
G Krt2 keratin 2 involved_in
acts_upstream_of_or_within