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G |
Dmbt1 |
deleted in malignant brain tumors 1 |
acts_upstream_of |
ISO |
(MGI:3057099|PMID:15452149) |
RGD |
PMID:15452149 |
MGI:3057099 |
NCBI chr 1:185,617,469...185,696,476
Ensembl chr 1:185,617,294...185,696,478
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Eya1 |
EYA transcriptional coactivator and phosphatase 1 |
acts_upstream_of_or_within |
ISO |
MGI:107423|MGI:1917942|MGI:1923373|MGI:2443665 (MGI:4950299|PMID:21385765) |
RGD |
PMID:21385765 |
MGI:4950299 |
NCBI chr 5:4,863,501...5,101,483
Ensembl chr 5:4,955,543...5,101,483
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G |
Clcn2 |
chloride voltage-gated channel 2 |
acts_upstream_of_or_within |
ISO |
MGI:2183262 (MGI:2182239|PMID:11976342) |
RGD |
PMID:11976342 |
MGI:2182239 |
NCBI chr11:80,197,741...80,211,657
Ensembl chr11:80,198,153...80,211,657
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G |
Ctnnb1 |
catenin beta 1 |
acts_upstream_of_or_within involved_in |
ISO IEA |
MGI:2148569 (MGI:3607950|PMID:16192304) GO_REF:0000107 |
RGD Ensembl |
PMID:16192304 |
GO_REF:0000107 MGI:3607950 |
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
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Nr5a2 |
nuclear receptor subfamily 5, group A, member 2 |
acts_upstream_of_or_within |
ISO |
(MGI:5588050|PMID:25063451) |
RGD |
PMID:25063451 |
MGI:5588050 |
NCBI chr13:48,313,634...48,433,494
Ensembl chr13:48,316,301...48,433,326
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G |
Prox1 |
prospero homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:3609548 (MGI:5317511|PMID:22178591) |
RGD |
PMID:22178591 |
MGI:5317511 |
NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183
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G |
Zfp800 |
zinc finger protein 800 |
acts_upstream_of_or_within |
ISO |
MGI:6716236 (MGI:6716121|PMID:33653874) |
RGD |
PMID:33653874 |
MGI:6716121 |
NCBI chr 4:56,798,326...56,849,766
Ensembl chr 4:56,826,997...56,849,791
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G |
Ascl1 |
achaete-scute family bHLH transcription factor 1 |
acts_upstream_of_or_within |
ISO |
MGI:1857470 (MGI:2387977|PMID:12361965) |
RGD |
PMID:12361965 |
MGI:2387977 |
NCBI chr 7:21,904,153...21,906,003
Ensembl chr 7:21,903,126...21,905,993
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G |
Insm1 |
INSM transcriptional repressor 1 |
involved_in |
ISO |
(MGI:3772428|PMID:18094025) |
RGD |
PMID:18094025 |
MGI:3772428 |
NCBI chr 3:133,639,790...133,642,963
Ensembl chr 3:133,639,580...133,643,003
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G |
Ascl5 |
achaete-scute family bHLH transcription factor 5 |
involved_in |
ISO |
(MGI:6305509|PMID:30504223), (MGI:7280983|PMID:34812512) |
RGD |
PMID:30504223 PMID:34812512 |
MGI:6305509 MGI:7280983 |
NCBI chr13:47,491,900...47,493,346
Ensembl chr13:47,492,026...47,492,592
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G |
Bmp2 |
bone morphogenetic protein 2 |
acts_upstream_of involved_in |
ISO IEA |
(MGI:3513220|PMID:15525533) GO_REF:0000107 |
RGD Ensembl |
PMID:15525533 |
GO_REF:0000107 MGI:3513220 |
NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
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G |
Bmp4 |
bone morphogenetic protein 4 |
acts_upstream_of involved_in |
ISO IEA |
(MGI:3513220|PMID:15525533) GO_REF:0000107 |
RGD Ensembl |
PMID:15525533 |
GO_REF:0000107 MGI:3513220 |
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
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G |
Bmp7 |
bone morphogenetic protein 7 |
acts_upstream_of |
ISO |
(MGI:3513220|PMID:15525533) |
RGD |
PMID:15525533 |
MGI:3513220 |
NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788
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G |
Dspp |
dentin sialophosphoprotein |
acts_upstream_of_or_within |
ISO |
MGI:2653208 (MGI:5912858|PMID:25027178) |
RGD |
PMID:25027178 |
MGI:5912858 |
NCBI chr14:5,565,562...5,571,669
Ensembl chr14:5,565,629...5,571,672
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G |
Enam |
enamelin |
acts_upstream_of_or_within involved_in |
ISO IBA |
MGI:3796583 (MGI:5647983|PMID:24603688) PMID:21873635 |
RGD |
PMID:24603688 PMID:21873635 |
MGI:5647983, RGD:13792537 |
NCBI chr14:19,556,729...19,581,433
Ensembl chr14:19,556,729...19,581,425
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G |
Fst |
follistatin |
acts_upstream_of |
ISO |
MGI:1857467|MGI:88180 (MGI:3513220|PMID:15525533) |
RGD |
PMID:15525533 |
MGI:3513220 |
NCBI chr 2:46,123,260...46,130,584
Ensembl chr 2:46,123,439...46,130,571
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G |
Tbx1 |
T-box transcription factor 1 |
acts_upstream_of_or_within |
ISO |
MGI:2179136 (MGI:3848106|PMID:19233155), (MGI:4848250|PMID:20816801) |
RGD |
PMID:19233155 PMID:20816801 |
MGI:3848106 MGI:4848250 |
NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380
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G |
Ascl1 |
achaete-scute family bHLH transcription factor 1 |
acts_upstream_of_or_within |
ISO |
MGI:1857470 (MGI:3581993|PMID:15878769) |
RGD |
PMID:15878769 |
MGI:3581993 |
NCBI chr 7:21,904,153...21,906,003
Ensembl chr 7:21,903,126...21,905,993
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G |
Ros1 |
ROS proto-oncogene 1 , receptor tyrosine kinase |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:80739|PMID:8675006) |
UniProt RGD |
PMID:8675006 |
GO_REF:0000024 MGI:80739 |
NCBI chr20:31,432,636...31,583,998
Ensembl chr20:31,432,637...31,583,865
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G |
Shroom3 |
shroom family member 3 |
acts_upstream_of_or_within |
ISO |
(MGI:3610718|PMID:16249236) |
RGD |
PMID:16249236 |
MGI:3610718 |
NCBI chr14:15,099,415...15,396,832
Ensembl chr14:15,099,423...15,396,915
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Gja1 |
gap junction protein, alpha 1 |
acts_upstream_of_or_within |
ISO |
MGI:2176205|MGI:3051881 (MGI:3624198|PMID:16624854) |
RGD |
PMID:16624854 |
MGI:3624198 |
NCBI chr20:35,756,007...35,768,481
Ensembl chr20:35,755,991...35,768,582
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G |
Kcnma1 |
potassium calcium-activated channel subfamily M alpha 1 |
acts_upstream_of_or_within |
ISO |
MGI:3050114 (MGI:3052624|PMID:15328414) |
RGD |
PMID:15328414 |
MGI:3052624 |
NCBI chr15:302,078...1,001,198
Ensembl chr15:302,214...1,001,198
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G |
Tgfb1 |
transforming growth factor, beta 1 |
acts_upstream_of_or_within |
ISO |
(MGI:6443509|PMID:31336344) |
RGD |
PMID:31336344 |
MGI:6443509 |
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
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G |
Yap1 |
Yes1 associated transcriptional regulator |
acts_upstream_of |
ISO |
(MGI:3818355|PMID:17980593) |
RGD |
PMID:17980593 |
MGI:3818355 |
NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010
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G |
Neurod1 |
neuronal differentiation 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:1096974|PMID:9308961) |
UniProt RGD |
PMID:9308961 |
GO_REF:0000024 MGI:1096974 |
NCBI chr 3:64,360,222...64,363,526
Ensembl chr 3:64,359,395...64,363,649
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G |
Nkx6-3 |
NK6 homeobox 3 |
acts_upstream_of acts_upstream_of_or_within |
ISO |
MGI:3795186 (MGI:3795066|PMID:18347062) |
RGD |
PMID:18347062 |
MGI:3795066 |
NCBI chr16:68,868,404...68,873,617
Ensembl chr16:68,868,404...68,873,617
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G |
Onecut1 |
one cut homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:2179340 (MGI:1859126|PMID:10825208) |
RGD |
PMID:10825208 |
MGI:1859126 |
NCBI chr 8:75,599,432...75,633,598
Ensembl chr 8:75,599,740...75,627,277
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G |
Pdx1 |
pancreatic and duodenal homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:2181362 (MGI:3612374|PMID:16418487) |
RGD |
PMID:16418487 |
MGI:3612374 |
NCBI chr12:7,757,865...7,763,064
Ensembl chr12:7,757,865...7,763,064
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G |
Percc1 |
proline and glutamate rich with coiled coil 1 |
involved_in |
ISO |
(MGI:6368375|PMID:31217582) |
RGD |
PMID:31217582 |
MGI:6368375 |
NCBI chr10:14,186,513...14,191,213
Ensembl chr10:14,188,216...14,189,040 Ensembl chr10:14,188,216...14,189,040
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G |
Rbm4 |
RNA binding motif protein 4 |
acts_upstream_of_or_within |
ISO |
MGI:5467987|MGI:5467988 (MGI:5466631|PMID:23129807) |
RGD |
PMID:23129807 |
MGI:5466631 |
NCBI chr 1:202,078,442...202,087,506
Ensembl chr 1:202,085,279...202,105,380
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G |
Fasn |
fatty acid synthase |
acts_upstream_of_or_within |
ISO |
MGI:3765070 (MGI:5630041|PMID:25565205) |
RGD |
PMID:25565205 |
MGI:5630041 |
NCBI chr10:106,072,093...106,090,259
Ensembl chr10:106,072,091...106,090,261
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G |
Muc2 |
mucin 2, oligomeric mucus/gel-forming |
acts_upstream_of_or_within |
ISO |
MGI:2183923 (MGI:2159585|PMID:11872843) |
RGD |
PMID:11872843 |
MGI:2159585 |
NCBI chr 1:196,796,257...196,831,740
Ensembl chr 1:196,799,517...196,831,756
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G |
Rara |
retinoic acid receptor, alpha |
acts_upstream_of_or_within |
ISO |
MGI:97858 (MGI:69060|PMID:7607067) |
RGD |
PMID:7607067 |
MGI:69060 |
NCBI chr10:83,883,490...83,928,932
Ensembl chr10:83,893,384...83,928,142
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G |
Rarb |
retinoic acid receptor, beta |
acts_upstream_of_or_within |
ISO |
MGI:97858 (MGI:69060|PMID:7607067) |
RGD |
PMID:7607067 |
MGI:69060 |
NCBI chr15:8,700,533...9,051,288
Ensembl chr15:8,406,492...9,051,288
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G |
Rarg |
retinoic acid receptor, gamma |
acts_upstream_of_or_within |
ISO |
MGI:97856|MGI:97857 (MGI:69060|PMID:7607067) |
RGD |
PMID:7607067 |
MGI:69060 |
NCBI chr 7:133,367,833...133,390,301
Ensembl chr 7:133,367,833...133,390,177
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G |
Slc9a4 |
solute carrier family 9 member A4 |
acts_upstream_of_or_within involved_in |
ISO IEA |
MGI:3579458 (MGI:3578697|PMID:15684419) GO_REF:0000107 |
RGD Ensembl |
PMID:15684419 |
GO_REF:0000107 MGI:3578697 |
NCBI chr 9:42,824,468...42,879,767
Ensembl chr 9:42,825,064...42,879,422
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G |
Spdef |
SAM pointed domain containing ets transcription factor |
acts_upstream_of_or_within |
ISO |
MGI:4410321 (MGI:4410300|PMID:19549527) |
RGD |
PMID:19549527 |
MGI:4410300 |
NCBI chr20:5,771,434...5,786,793
Ensembl chr20:5,771,441...5,785,893
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G |
Cav1 |
caveolin 1 |
acts_upstream_of |
ISO |
MGI:2180364 (MGI:3703676|PMID:12388746) |
RGD |
PMID:12388746 |
MGI:3703676 |
NCBI chr 4:45,640,624...45,673,708
Ensembl chr 4:45,634,918...45,673,705
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G |
Ctnnb1 |
catenin beta 1 |
acts_upstream_of_or_within |
ISO |
MGI:2148567 (MGI:3051737|PMID:15131783) |
RGD |
PMID:15131783 |
MGI:3051737 |
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
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G |
Ext1 |
exostosin glycosyltransferase 1 |
acts_upstream_of_or_within |
ISO |
(MGI:6160687|PMID:29700203) |
RGD |
PMID:29700203 |
MGI:6160687 |
NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357
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G |
Gata2 |
GATA binding protein 2 |
acts_upstream_of_or_within |
ISO |
MGI:2179995|MGI:3628639 (MGI:3625416|PMID:16543408) |
RGD |
PMID:16543408 |
MGI:3625416 |
NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761
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G |
Gcm2 |
glial cells missing transcription factor 2 |
acts_upstream_of_or_within |
ISO |
MGI:1889069 (MGI:3709788|PMID:17382312) |
RGD |
PMID:17382312 |
MGI:3709788 |
NCBI chr17:23,652,637...23,661,754
Ensembl chr17:23,652,637...23,661,754
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G |
Hif1a |
hypoxia inducible factor 1 subunit alpha |
acts_upstream_of_or_within |
ISO |
MGI:2386679 (MGI:2654263|PMID:12620994) |
RGD |
PMID:12620994 |
MGI:2654263 |
NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
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G |
Il31ra |
interleukin 31 receptor A |
acts_upstream_of_or_within |
ISO |
MGI:3717594 (MGI:3844143|PMID:19414760) |
RGD |
PMID:19414760 |
MGI:3844143 |
NCBI chr 2:44,118,748...44,189,943
Ensembl chr 2:44,122,624...44,183,767
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G |
Klf4 |
KLF transcription factor 4 |
acts_upstream_of_or_within |
ISO |
MGI:2183917|MGI:3045749 (MGI:3697243|PMID:17060454) |
RGD |
PMID:17060454 |
MGI:3697243 |
NCBI chr 5:70,278,843...70,283,751
Ensembl chr 5:70,278,972...70,283,602
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G |
Nfib |
nuclear factor I/B |
acts_upstream_of_or_within |
ISO |
MGI:3530139 (MGI:5616978|PMID:25403566) |
RGD |
PMID:25403566 |
MGI:5616978 |
NCBI chr 5:96,759,208...96,973,092
Ensembl chr 5:96,764,653...96,975,479
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G |
Pax6 |
paired box 6 |
acts_upstream_of |
ISO |
MGI:1856158 (MGI:3584303|PMID:16080917) |
RGD |
PMID:16080917 |
MGI:3584303 |
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
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G |
Sox9 |
SRY-box transcription factor 9 |
acts_upstream_of |
ISO |
MGI:2429649 (MGI:3766658|PMID:17681175) |
RGD |
PMID:17681175 |
MGI:3766658 |
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
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G |
Yap1 |
Yes1 associated transcriptional regulator |
acts_upstream_of |
ISO |
(MGI:3818355|PMID:17980593) |
RGD |
PMID:17980593 |
MGI:3818355 |
NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010
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Bhlha15 |
basic helix-loop-helix family, member a15 |
acts_upstream_of_or_within |
ISO |
(MGI:3038031|PMID:15024058) |
RGD |
PMID:15024058 |
MGI:3038031 |
NCBI chr12:10,420,465...10,424,641
Ensembl chr12:10,420,467...10,424,713
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G |
Fzd5 |
frizzled class receptor 5 |
acts_upstream_of_or_within involved_in |
ISO IEA |
(MGI:3579620|PMID:15778706) GO_REF:0000107 |
RGD Ensembl |
PMID:15778706 |
GO_REF:0000107 MGI:3579620 |
NCBI chr 9:66,117,370...66,119,127
Ensembl chr 9:66,113,112...66,121,457
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G |
Gata2 |
GATA binding protein 2 |
acts_upstream_of_or_within |
ISO |
MGI:2179995|MGI:3628639 (MGI:3625416|PMID:16543408) |
RGD |
PMID:16543408 |
MGI:3625416 |
NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761
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G |
Gpat4 |
glycerol-3-phosphate acyltransferase 4 |
acts_upstream_of_or_within |
ISO |
MGI:3624276 (MGI:3623167|PMID:16449762) |
RGD |
PMID:16449762 |
MGI:3623167 |
NCBI chr16:68,819,031...68,852,903
Ensembl chr16:68,819,079...68,852,901
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G |
Hif1a |
hypoxia inducible factor 1 subunit alpha |
acts_upstream_of_or_within involved_in |
ISO IEA |
MGI:2384429 (MGI:4830408|PMID:20808783) GO_REF:0000107 |
RGD Ensembl |
PMID:20808783 |
GO_REF:0000107 MGI:4830408 |
NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
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G |
Pgr |
progesterone receptor |
acts_upstream_of_or_within involved_in |
ISO IEA |
MGI:1857933 (MGI:3028786|PMID:14765981) GO_REF:0000107 |
RGD Ensembl |
PMID:14765981 |
GO_REF:0000107 MGI:3028786 |
NCBI chr 8:6,073,216...6,131,552
Ensembl chr 8:6,072,673...6,131,344
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G |
Xbp1 |
X-box binding protein 1 |
acts_upstream_of_or_within |
ISO |
MGI:2386788 (MGI:3768452|PMID:16362047) |
RGD |
PMID:16362047 |
MGI:3768452 |
NCBI chr14:80,390,629...80,395,713
Ensembl chr14:80,390,643...80,395,693
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G |
Dll1 |
delta like canonical Notch ligand 1 |
acts_upstream_of_or_within involved_in |
ISO IEA |
MGI:1932522|MGI:3044907 (MGI:3621102|PMID:16495313) GO_REF:0000107 |
RGD Ensembl |
PMID:16495313 |
GO_REF:0000107 MGI:3621102 |
NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
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G |
Hes1 |
hes family bHLH transcription factor 1 |
acts_upstream_of_or_within |
ISO |
MGI:2149672 (MGI:1888698|PMID:10952889) |
RGD |
PMID:10952889 |
MGI:1888698 |
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
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|
G |
Jag1 |
jagged canonical Notch ligand 1 |
acts_upstream_of_or_within involved_in |
ISO IEA |
(MGI:3529381|PMID:15064243) GO_REF:0000107 |
RGD Ensembl |
PMID:15064243 |
GO_REF:0000107 MGI:3529381 |
NCBI chr 3:124,406,794...124,442,220
Ensembl chr 3:124,406,794...124,442,209
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G |
Nodal |
nodal growth differentiation factor |
acts_upstream_of_or_within |
ISO |
MGI:2180793 (MGI:3640721|PMID:16678814) |
RGD |
PMID:16678814 |
MGI:3640721 |
NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837
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|
G |
Notch1 |
notch receptor 1 |
acts_upstream_of_or_within |
ISO |
(MGI:3529381|PMID:15064243) |
RGD |
PMID:15064243 |
MGI:3529381 |
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
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G |
C1galt1 |
core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1 |
acts_upstream_of_or_within |
ISO |
MGI:3714051 (MGI:5002772|PMID:21383503) |
RGD |
PMID:21383503 |
MGI:5002772 |
NCBI chr 4:35,930,743...35,966,102
Ensembl chr 4:35,928,104...35,961,831
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|
G |
Cdh1 |
cadherin 1 |
acts_upstream_of_or_within |
ISO |
(MGI:5449145|PMID:22766025) |
RGD |
PMID:22766025 |
MGI:5449145 |
NCBI chr19:34,492,371...34,561,775
Ensembl chr19:34,492,371...34,561,775
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G |
Dicer1 |
dicer 1 ribonuclease III |
acts_upstream_of_or_within |
ISO |
MGI:108015 (MGI:4946569|PMID:21307095) |
RGD |
PMID:21307095 |
MGI:4946569 |
NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
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G |
Il6st |
interleukin 6 cytokine family signal transducer |
involved_in |
ISO IEA |
(PMID:25731159) GO_REF:0000107 (MGI:5629863|PMID:25731159) |
RGD Ensembl |
PMID:25731159 |
GO_REF:0000107 MGI:5629863 |
NCBI chr 2:44,065,979...44,106,255
Ensembl chr 2:44,066,130...44,109,936
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G |
Klf5 |
KLF transcription factor 5 |
acts_upstream_of_or_within |
ISO |
MGI:3806635 (MGI:5471906|PMID:23266329) |
RGD |
PMID:23266329 |
MGI:5471906 |
NCBI chr15:76,060,320...76,079,445
Ensembl chr15:76,064,258...76,079,445
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G |
Mir3545 |
microRNA 3545 |
acts_upstream_of_or_within |
ISO |
(MGI:4946569|PMID:21307095) |
RGD |
PMID:21307095 |
MGI:4946569 |
NCBI chr 6:131,199,542...131,199,656
Ensembl chr 6:131,199,542...131,199,656
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|
G |
Mir7-1 |
microRNA 7-1 |
acts_upstream_of_or_within |
ISO |
(MGI:4946569|PMID:21307095) |
RGD |
PMID:21307095 |
MGI:4946569 |
NCBI chr17:6,273,264...6,273,360
Ensembl chr17:6,273,264...6,273,360
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G |
Nkx3-2 |
NK3 homeobox 2 |
acts_upstream_of_or_within |
ISO |
MGI:2177178 (MGI:4946569|PMID:21307095) |
RGD |
PMID:21307095 |
MGI:4946569 |
NCBI chr14:69,183,795...69,186,182
Ensembl chr14:69,183,820...69,186,061
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G |
Prdm1 |
PR/SET domain 1 |
acts_upstream_of_or_within |
ISO |
MGI:3605483|MGI:3605621 (MGI:5014435|PMID:21670299) |
RGD |
PMID:21670299 |
MGI:5014435 |
NCBI chr20:47,959,858...47,981,488
Ensembl chr20:47,959,858...47,981,488
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G |
Spdef |
SAM pointed domain containing ets transcription factor |
acts_upstream_of_or_within |
ISO |
MGI:4410321 (MGI:4410300|PMID:19549527) |
RGD |
PMID:19549527 |
MGI:4410300 |
NCBI chr20:5,771,434...5,786,793
Ensembl chr20:5,771,441...5,785,893
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G |
Src |
SRC proto-oncogene, non-receptor tyrosine kinase |
involved_in |
ISO |
(PMID:25731159) (MGI:5629863|PMID:25731159) |
RGD |
PMID:25731159 |
MGI:5629863 |
NCBI chr 3:146,091,969...146,139,492
Ensembl chr 3:146,091,841...146,139,476
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|
G |
Tigar |
TP53 induced glycolysis regulatory phosphatase |
acts_upstream_of_or_within |
ISO |
MGI:4391656 (MGI:5498602|PMID:23726973) |
RGD |
PMID:23726973 |
MGI:5498602 |
NCBI chr 4:159,927,138...159,946,094
Ensembl chr 4:159,927,139...159,946,029
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G |
Yap1 |
Yes1 associated transcriptional regulator |
involved_in |
ISO |
(PMID:25731159) (MGI:5629863|PMID:25731159) |
RGD |
PMID:25731159 |
MGI:5629863 |
NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010
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G |
Yipf6 |
Yip1 domain family, member 6 |
acts_upstream_of_or_within involved_in |
ISO IEA |
MGI:4839074 (MGI:5437477|PMID:22802641) GO_REF:0000107 |
RGD Ensembl |
PMID:22802641 |
GO_REF:0000107 MGI:5437477 |
NCBI chr X:64,039,602...64,051,715
Ensembl chr X:64,040,952...64,054,702
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G |
Cbfa2t2 |
CBFA2/RUNX1 partner transcriptional co-repressor 2 |
involved_in |
ISO |
(MGI:5629454|PMID:25398765) |
RGD |
PMID:25398765 |
MGI:5629454 |
NCBI chr 3:142,936,945...143,043,205
Ensembl chr 3:142,936,985...143,043,197
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G |
Cdx2 |
caudal type homeo box 2 |
involved_in |
ISO |
(MGI:5301472|PMID:22015720) |
RGD |
PMID:22015720 |
MGI:5301472 |
NCBI chr12:7,726,798...7,733,142
Ensembl chr12:7,726,798...7,733,142
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G |
Gata4 |
GATA binding protein 4 |
acts_upstream_of_or_within |
ISO |
(PMID:9566909) |
RGD |
PMID:9566909 |
|
NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636
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G |
Gata5 |
GATA binding protein 5 |
acts_upstream_of_or_within |
ISO |
(PMID:9566909) |
RGD |
PMID:9566909 |
|
NCBI chr 3:167,418,563...167,426,751
Ensembl chr 3:167,418,565...167,426,751
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G |
Gata6 |
GATA binding protein 6 |
acts_upstream_of_or_within involved_in |
ISO IEA |
(PMID:9566909) GO_REF:0000107 |
RGD Ensembl |
PMID:9566909 |
GO_REF:0000107 |
NCBI chr18:2,188,121...2,219,532
Ensembl chr18:2,188,121...2,219,532
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G |
Ptk6 |
protein tyrosine kinase 6 |
involved_in |
ISO |
(MGI:3640030|PMID:16782882) |
RGD |
PMID:16782882 |
MGI:3640030 |
NCBI chr 3:168,307,073...168,315,664
Ensembl chr 3:168,307,073...168,315,664
|
|
G |
Sav1 |
salvador family WW domain containing protein 1 |
acts_upstream_of_or_within |
ISO |
MGI:3790763 (MGI:3785211|PMID:18369314) |
RGD |
PMID:18369314 |
MGI:3785211 |
NCBI chr 6:88,478,536...88,500,121
Ensembl chr 6:88,478,539...88,499,968
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G |
Sox9 |
SRY-box transcription factor 9 |
acts_upstream_of |
ISO |
MGI:2429649 (MGI:3766658|PMID:17681175) |
RGD |
PMID:17681175 |
MGI:3766658 |
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
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G |
Yap1 |
Yes1 associated transcriptional regulator |
acts_upstream_of |
ISO |
(MGI:3818355|PMID:17980593) |
RGD |
PMID:17980593 |
MGI:3818355 |
NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010
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G |
Cdkn1a |
cyclin-dependent kinase inhibitor 1A |
|
IEP |
|
RGD |
PMID:20466941 |
RGD:8662316 |
NCBI chr20:7,149,177...7,159,727
Ensembl chr20:7,149,217...7,159,585
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G |
Fzd5 |
frizzled class receptor 5 |
acts_upstream_of_or_within involved_in |
ISO IEA |
(MGI:3579620|PMID:15778706) GO_REF:0000107 |
RGD Ensembl |
PMID:15778706 |
GO_REF:0000107 MGI:3579620 |
NCBI chr 9:66,117,370...66,119,127
Ensembl chr 9:66,113,112...66,121,457
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G |
Hif1a |
hypoxia inducible factor 1 subunit alpha |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2384429 (MGI:4830408|PMID:20808783) |
Ensembl RGD |
PMID:20808783 |
GO_REF:0000107 MGI:4830408 |
NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
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G |
Hoxa5 |
homeo box A5 |
acts_upstream_of_or_within |
ISO |
MGI:2150397 (MGI:1349338|PMID:10564089) |
RGD |
PMID:10564089 |
MGI:1349338 |
NCBI chr 4:81,302,341...81,306,234
Ensembl chr 4:81,302,353...81,306,234
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|
G |
Tmigd1 |
transmembrane and immunoglobulin domain containing 1 |
acts_upstream_of_or_within |
ISO |
MGI:6506201 (MGI:6491524|PMID:33129760) |
RGD |
PMID:33129760 |
MGI:6491524 |
NCBI chr10:61,739,071...61,751,025
Ensembl chr10:61,736,462...61,751,025
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G |
Tyms |
thymidylate synthetase |
|
IEP |
|
RGD |
PMID:1260861 |
RGD:2317427 |
NCBI chr 9:113,313,454...113,329,551
Ensembl chr 9:113,313,452...113,329,536
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G |
Agr2 |
anterior gradient 2, protein disulphide isomerase family member |
acts_upstream_of_or_within |
ISO |
(MGI:5429471|PMID:22675208) |
RGD |
PMID:22675208 |
MGI:5429471 |
NCBI chr 6:52,708,602...52,729,378
Ensembl chr 6:52,708,602...52,729,371
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|
G |
Hoxa5 |
homeo box A5 |
acts_upstream_of_or_within |
ISO |
MGI:2150397 (MGI:3665532|PMID:17003488) |
RGD |
PMID:17003488 |
MGI:3665532 |
NCBI chr 4:81,302,341...81,306,234
Ensembl chr 4:81,302,353...81,306,234
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|
G |
Spdef |
SAM pointed domain containing ets transcription factor |
acts_upstream_of_or_within |
ISO |
(MGI:3709719|PMID:17347682) |
RGD |
PMID:17347682 |
MGI:3709719 |
NCBI chr20:5,771,434...5,786,793
Ensembl chr20:5,771,441...5,785,893
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|
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G |
Ascl1 |
achaete-scute family bHLH transcription factor 1 |
acts_upstream_of_or_within |
ISO |
MGI:1857470 (MGI:3664178|PMID:9126746) |
RGD |
PMID:9126746 |
MGI:3664178 |
NCBI chr 7:21,904,153...21,906,003
Ensembl chr 7:21,903,126...21,905,993
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G |
Foxp1 |
forkhead box P1 |
acts_upstream_of_or_within |
ISO |
MGI:1921373 (MGI:5429471|PMID:22675208) |
RGD |
PMID:22675208 |
MGI:5429471 |
NCBI chr 4:131,559,599...132,155,092
Ensembl chr 4:131,564,756...132,112,258
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G |
Foxp4 |
forkhead box P4 |
acts_upstream_of_or_within |
ISO |
MGI:1914004 (MGI:5429471|PMID:22675208) |
RGD |
PMID:22675208 |
MGI:5429471 |
NCBI chr 9:13,058,506...13,115,406
Ensembl chr 9:13,058,476...13,114,879
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G |
Hes1 |
hes family bHLH transcription factor 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2149672 (MGI:1351379|PMID:10615124) |
Ensembl RGD |
PMID:10615124 |
GO_REF:0000107 MGI:1351379 |
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
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|
G |
Mir7-1 |
microRNA 7-1 |
acts_upstream_of_or_within |
ISO |
(MGI:5437569|PMID:22764048) |
RGD |
PMID:22764048 |
MGI:5437569 |
NCBI chr17:6,273,264...6,273,360
Ensembl chr17:6,273,264...6,273,360
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|
|
G |
Hes1 |
hes family bHLH transcription factor 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2149672 (MGI:3804618|PMID:18173746) |
Ensembl RGD |
PMID:18173746 |
GO_REF:0000107 MGI:3804618 |
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
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G |
Cftr |
CF transmembrane conductance regulator |
|
IMP |
|
RGD |
PMID:23178930 |
RGD:11567224 |
NCBI chr 4:46,561,269...46,728,759
Ensembl chr 4:46,560,885...46,728,756
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G |
Ascl1 |
achaete-scute family bHLH transcription factor 1 |
acts_upstream_of_or_within |
ISO |
MGI:1857470 (MGI:1888698|PMID:10952889) |
RGD |
PMID:10952889 |
MGI:1888698 |
NCBI chr 7:21,904,153...21,906,003
Ensembl chr 7:21,903,126...21,905,993
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G |
Bccip |
BRCA2 and CDKN1A interacting protein |
involved_in |
ISO |
(PMID:18440304) |
RGD |
PMID:18440304 |
|
NCBI chr 1:188,512,544...188,524,957
Ensembl chr 1:188,512,367...188,524,958
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G |
Gata2 |
GATA binding protein 2 |
acts_upstream_of_or_within |
ISO |
MGI:2179995|MGI:3628639 (MGI:3625416|PMID:16543408) |
RGD |
PMID:16543408 |
MGI:3625416 |
NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761
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G |
Hes1 |
hes family bHLH transcription factor 1 |
acts_upstream_of |
ISO |
MGI:2149672 (MGI:1888698|PMID:10952889) |
RGD |
PMID:10952889 |
MGI:1888698 |
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
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G |
Jag1 |
jagged canonical Notch ligand 1 |
acts_upstream_of involved_in |
ISO IEA |
(MGI:3529381|PMID:15064243) GO_REF:0000107 |
RGD Ensembl |
PMID:15064243 |
GO_REF:0000107 MGI:3529381 |
NCBI chr 3:124,406,794...124,442,220
Ensembl chr 3:124,406,794...124,442,209
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|
G |
Nkx2-2 |
NK2 homeobox 2 |
acts_upstream_of_or_within |
ISO |
MGI:1932100 (MGI:3835247|PMID:18987169) |
RGD |
PMID:18987169 |
MGI:3835247 |
NCBI chr 3:134,619,701...134,630,282
Ensembl chr 3:134,620,039...134,622,411
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G |
Notch1 |
notch receptor 1 |
acts_upstream_of |
ISO |
(MGI:3529381|PMID:15064243) |
RGD |
PMID:15064243 |
MGI:3529381 |
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
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|
G |
Otp |
orthopedia homeobox |
acts_upstream_of_or_within |
ISO |
MGI:2180541 (MGI:1347696|PMID:10557207) |
RGD |
PMID:10557207 |
MGI:1347696 |
NCBI chr 2:26,108,158...26,116,359
Ensembl chr 2:26,108,163...26,116,359
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G |
Pou3f2 |
POU class 3 homeobox 2 |
acts_upstream_of_or_within involved_in |
ISO IEA |
MGI:1857996 (MGI:77941|PMID:8543156) GO_REF:0000107 |
RGD Ensembl |
PMID:8543156 |
GO_REF:0000107 MGI:77941 |
NCBI chr 5:36,077,930...36,083,838
Ensembl chr 5:36,077,930...36,083,838
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G |
Wnt11 |
Wnt family member 11 |
involved_in |
ISO |
(PMID:20219091) |
RGD |
PMID:20219091 |
|
NCBI chr 1:153,134,503...153,154,294
Ensembl chr 1:153,138,197...153,154,294
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G |
Abl1 |
ABL proto-oncogene 1, non-receptor tyrosine kinase |
acts_upstream_of_or_within |
ISO |
MGI:87860 (MGI:1327082|PMID:9883720) |
RGD |
PMID:9883720 |
MGI:1327082 |
NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065
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G |
Abl2 |
ABL proto-oncogene 2, non-receptor tyrosine kinase |
acts_upstream_of_or_within |
ISO |
MGI:87859 (MGI:1327082|PMID:9883720) |
RGD |
PMID:9883720 |
MGI:1327082 |
NCBI chr13:68,673,702...68,839,742
Ensembl chr13:68,673,722...68,839,742
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G |
Afdn |
afadin, adherens junction formation factor |
acts_upstream_of_or_within |
ISO |
MGI:95387 (MGI:5605648|PMID:25100583) |
RGD |
PMID:25100583 |
MGI:5605648 |
NCBI chr 1:53,884,711...54,034,216
Ensembl chr 1:53,905,373...54,034,216
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|
G |
B9d1 |
B9 domain containing 1 |
acts_upstream_of_or_within |
ISO |
MGI:5301332 (MGI:5300833|PMID:22179047) |
RGD |
PMID:22179047 |
MGI:5300833 |
NCBI chr10:46,186,222...46,196,309
Ensembl chr10:46,186,691...46,196,008
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G |
Cdh2 |
cadherin 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:95387 (MGI:5605648|PMID:25100583) |
Ensembl RGD |
PMID:25100583 |
GO_REF:0000107 MGI:5605648 |
NCBI chr18:7,776,704...7,990,934
Ensembl chr18:7,776,704...7,990,167
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G |
Dlg5 |
discs large MAGUK scaffold protein 5 |
acts_upstream_of_or_within |
ISO |
MGI:3757646 (MGI:3722974|PMID:17765678) |
RGD |
PMID:17765678 |
MGI:3722974 |
NCBI chr15:75,786...209,735
Ensembl chr15:75,786...187,837
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G |
Dll1 |
delta like canonical Notch ligand 1 |
acts_upstream_of involved_in |
ISO IEA |
MGI:1932522|MGI:3044907 (MGI:3621102|PMID:16495313) GO_REF:0000107 |
RGD Ensembl |
PMID:16495313 |
GO_REF:0000107 MGI:3621102 |
NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
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|
G |
Emx1 |
empty spiracles homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:1314653|MGI:88355 (MGI:5605648|PMID:25100583) |
RGD |
PMID:25100583 |
MGI:5605648 |
NCBI chr 4:117,725,148...117,741,616
Ensembl chr 4:117,725,155...117,741,613
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|
G |
Fgf2 |
fibroblast growth factor 2 |
acts_upstream_of |
ISO |
(MGI:2429373|PMID:12417662) |
RGD |
PMID:12417662 |
MGI:2429373 |
NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221
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G |
Fgf8 |
fibroblast growth factor 8 |
involved_in |
ISO |
(PMID:17309880) |
RGD |
PMID:17309880 |
|
NCBI chr 1:244,584,477...244,590,359
Ensembl chr 1:244,584,652...244,590,359
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|
G |
Fgfr3 |
fibroblast growth factor receptor 3 |
acts_upstream_of_or_within |
ISO |
MGI:1931521 (MGI:2429373|PMID:12417662), (MGI:3714212|PMID:17557302) |
RGD |
PMID:12417662 PMID:17557302 |
MGI:2429373 MGI:3714212 |
NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341
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G |
Gak |
cyclin G associated kinase |
acts_upstream_of_or_within |
ISO |
MGI:2445832|MGI:5305733 (MGI:5305417|PMID:18434600) |
RGD |
PMID:18434600 |
MGI:5305417 |
NCBI chr14:1,089,853...1,164,098
Ensembl chr14:1,089,866...1,216,398
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|
G |
Kdm2a |
lysine demethylase 2A |
acts_upstream_of_or_within |
ISO |
(MGI:5615026|PMID:25463925) |
RGD |
PMID:25463925 |
MGI:5615026 |
NCBI chr 1:201,612,427...201,682,359
Ensembl chr 1:201,612,453...201,680,787
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G |
Otx2 |
orthodenticle homeobox 2 |
acts_upstream_of_or_within |
ISO |
MGI:2178753 (MGI:2680889|PMID:14625556) |
RGD |
PMID:14625556 |
MGI:2680889 |
NCBI chr15:21,942,233...21,953,034
Ensembl chr15:21,943,191...21,953,416
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|
G |
Sox11 |
SRY-box transcription factor 11 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:4838379|PMID:20646169) |
UniProt RGD |
PMID:20646169 |
GO_REF:0000024 MGI:4838379 |
NCBI chr 6:44,008,333...44,010,354
Ensembl chr 6:44,008,340...44,010,354
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G |
Sox4 |
SRY-box transcription factor 4 |
involved_in |
ISO |
(MGI:4838379|PMID:20646169) |
RGD |
PMID:20646169 |
MGI:4838379 |
NCBI chr17:35,667,809...35,672,515
Ensembl chr17:35,667,537...35,673,665
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|
G |
Tmem231 |
transmembrane protein 231 |
acts_upstream_of_or_within |
ISO |
MGI:4284576 (MGI:5300833|PMID:22179047) |
RGD |
PMID:22179047 |
MGI:5300833 |
NCBI chr19:39,883,077...39,904,296
Ensembl chr19:39,883,077...39,904,269
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G |
Vax1 |
ventral anterior homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:1859863 (MGI:3531600|PMID:15590934) |
RGD |
PMID:15590934 |
MGI:3531600 |
NCBI chr 1:258,324,571...258,342,396
Ensembl chr 1:258,326,276...258,330,192
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G |
Dlx3 |
distal-less homeobox 3 |
acts_upstream_of_or_within |
ISO |
MGI:2386570|MGI:3813133 (MGI:5320683|PMID:22351765) |
RGD |
PMID:22351765 |
MGI:5320683 |
NCBI chr10:80,064,489...80,069,891
Ensembl chr10:80,064,489...80,069,872
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|
G |
Dspp |
dentin sialophosphoprotein |
acts_upstream_of_or_within involved_in |
IEP ISO IBA |
MGI:2653208 (MGI:5912858|PMID:25027178) PMID:21873635 |
RGD |
PMID:25027178 PMID:15763925 PMID:21873635 |
MGI:5912858, RGD:12911014, RGD:13792537 |
NCBI chr14:5,565,562...5,571,669
Ensembl chr14:5,565,629...5,571,672
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|
G |
Fam20c |
FAM20C, golgi associated secretory pathway kinase |
acts_upstream_of_or_within |
IEP ISO |
(MGI:3715055|PMID:17369251) |
RGD |
PMID:17369251 PMID:17369251 |
MGI:3715055, RGD:11560522 |
NCBI chr12:15,826,864...15,885,423
Ensembl chr12:15,826,871...15,884,543
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G |
Lef1 |
lymphoid enhancer binding factor 1 |
|
IMP |
|
RGD |
PMID:20425127 |
RGD:4110819 |
NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794
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|
G |
Map1b |
microtubule-associated protein 1B |
acts_upstream_of_or_within |
ISO |
(PMID:19567321) |
RGD |
PMID:19567321 |
|
NCBI chr 2:30,817,261...30,910,458
Ensembl chr 2:30,817,261...30,910,317
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|
G |
Mir875 |
microRNA 875 |
involved_in |
ISO |
(MGI:6405074|PMID:32188878) |
RGD |
PMID:32188878 |
MGI:6405074 |
NCBI chr 7:66,861,955...66,862,027
Ensembl chr 7:66,861,955...66,862,027
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|
G |
Tubb5 |
tubulin, beta 5 class I |
acts_upstream_of_or_within |
ISO |
(PMID:19567321) |
RGD |
PMID:19567321 |
|
NCBI chr20:2,912,779...2,916,928
Ensembl chr20:2,912,778...2,916,940
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G |
Pax6 |
paired box 6 |
involved_in |
IMP IEA ISO |
PMID:20592023 GO_REF:0000107 (MGI:4943812|PMID:20592023) (PMID:20592023) |
Ensembl RGD |
PMID:20592023 PMID:20592023 |
GO_REF:0000107 MGI:4943812, RGD:8552352 |
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
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|
|
G |
Gata6 |
GATA binding protein 6 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (MGI:3701716|PMID:16887115) |
Ensembl RGD |
PMID:16887115 |
GO_REF:0000107 MGI:3701716 |
NCBI chr18:2,188,121...2,219,532
Ensembl chr18:2,188,121...2,219,532
|
|
G |
Hes1 |
hes family bHLH transcription factor 1 |
acts_upstream_of involved_in |
ISO IEA |
MGI:2149672 (MGI:1351379|PMID:10615124) GO_REF:0000107 |
RGD Ensembl |
PMID:10615124 |
GO_REF:0000107 MGI:1351379 |
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
|
|
G |
Insm1 |
INSM transcriptional repressor 1 |
involved_in acts_upstream_of_or_within |
ISO |
(MGI:3619850|PMID:16511571) |
RGD |
PMID:16511571 |
MGI:3619850 |
NCBI chr 3:133,639,790...133,642,963
Ensembl chr 3:133,639,580...133,643,003
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|
G |
Nkx6-1 |
NK6 homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:1352738 (MGI:3579924|PMID:15944193) |
RGD |
PMID:15944193 |
MGI:3579924 |
NCBI chr14:7,969,756...7,976,689
Ensembl chr14:7,969,756...7,976,681
|
|
G |
Nkx6-2 |
NK6 homeobox 2 |
acts_upstream_of_or_within |
ISO |
MGI:1206039 (MGI:3579924|PMID:15944193) |
RGD |
PMID:15944193 |
MGI:3579924 |
NCBI chr 1:194,380,149...194,383,533
Ensembl chr 1:194,381,975...194,383,515
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|
G |
Onecut1 |
one cut homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:2179340 (MGI:1859126|PMID:10825208) |
RGD |
PMID:10825208 |
MGI:1859126 |
NCBI chr 8:75,599,432...75,633,598
Ensembl chr 8:75,599,740...75,627,277
|
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G |
Pax6 |
paired box 6 |
|
IMP |
|
RGD |
PMID:20592023 |
RGD:8552352 |
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
|
|
G |
Rfx6 |
regulatory factor X, 6 |
involved_in |
ISO |
(MGI:4422104|PMID:20148032) |
RGD |
PMID:20148032 |
MGI:4422104 |
NCBI chr20:31,020,221...31,073,266
Ensembl chr20:31,019,829...31,073,147
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|
G |
Vhl |
von Hippel-Lindau tumor suppressor |
acts_upstream_of_or_within |
ISO |
MGI:2136645|MGI:3608931 (MGI:5618205|PMID:25186293) |
RGD |
PMID:25186293 |
MGI:5618205 |
NCBI chr 4:146,772,483...146,779,376
Ensembl chr 4:146,772,468...146,779,377
|
|
|
G |
Neurod1 |
neuronal differentiation 1 |
acts_upstream_of_or_within |
ISO |
MGI:97347 (MGI:3768695|PMID:17988662) |
RGD |
PMID:17988662 |
MGI:3768695 |
NCBI chr 3:64,360,222...64,363,526
Ensembl chr 3:64,359,395...64,363,649
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G |
Nkx2-2 |
NK2 homeobox 2 |
acts_upstream_of_or_within |
ISO |
MGI:1339708|MGI:1932100 (MGI:3703458|PMID:17202186), (MGI:3768695|PMID:17988662) |
RGD |
PMID:17202186 PMID:17988662 |
MGI:3703458 MGI:3768695 |
NCBI chr 3:134,619,701...134,630,282
Ensembl chr 3:134,620,039...134,622,411
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G |
Onecut1 |
one cut homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:2179340 (MGI:1859126|PMID:10825208) |
RGD |
PMID:10825208 |
MGI:1859126 |
NCBI chr 8:75,599,432...75,633,598
Ensembl chr 8:75,599,740...75,627,277
|
|
G |
Rfx6 |
regulatory factor X, 6 |
involved_in |
ISO |
(MGI:4422104|PMID:20148032) |
RGD |
PMID:20148032 |
MGI:4422104 |
NCBI chr20:31,020,221...31,073,266
Ensembl chr20:31,019,829...31,073,147
|
|
|
G |
Rfx6 |
regulatory factor X, 6 |
involved_in |
ISO |
(MGI:4422104|PMID:20148032) |
RGD |
PMID:20148032 |
MGI:4422104 |
NCBI chr20:31,020,221...31,073,266
Ensembl chr20:31,019,829...31,073,147
|
|
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G |
Neurod1 |
neuronal differentiation 1 |
acts_upstream_of_or_within |
ISO |
MGI:97347 (MGI:3768695|PMID:17988662) |
RGD |
PMID:17988662 |
MGI:3768695 |
NCBI chr 3:64,360,222...64,363,526
Ensembl chr 3:64,359,395...64,363,649
|
|
G |
Nkx2-2 |
NK2 homeobox 2 |
acts_upstream_of_or_within |
ISO |
MGI:1339708 (MGI:3768695|PMID:17988662) |
RGD |
PMID:17988662 |
MGI:3768695 |
NCBI chr 3:134,619,701...134,630,282
Ensembl chr 3:134,620,039...134,622,411
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G |
Fgf2 |
fibroblast growth factor 2 |
acts_upstream_of_or_within |
ISO |
(MGI:2429373|PMID:12417662) |
RGD |
PMID:12417662 |
MGI:2429373 |
NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221
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|
|
G |
Serpine1 |
serpin family E member 1 |
involved_in |
ISO IEA |
(PMID:27046084) GO_REF:0000107 |
RGD Ensembl |
PMID:27046084 |
GO_REF:0000107 |
NCBI chr12:19,601,272...19,611,657
Ensembl chr12:19,601,272...19,611,657
|
|
|
G |
Bad |
BCL2-associated agonist of cell death |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:3778846|PMID:18223655) |
UniProt RGD |
PMID:18223655 |
GO_REF:0000024 MGI:3778846 |
NCBI chr 1:204,133,502...204,142,829
Ensembl chr 1:204,131,501...204,142,823
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|
G |
Rfx3 |
regulatory factor X3 |
involved_in |
ISO |
(MGI:4941444|PMID:20413507) |
RGD |
PMID:20413507 |
MGI:4941444 |
NCBI chr 1:225,449,872...225,709,622
Ensembl chr 1:225,456,187...225,709,402
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G |
Foxp1 |
forkhead box P1 |
acts_upstream_of_or_within |
ISO |
MGI:1344405|MGI:1921373 (MGI:5429471|PMID:22675208) |
RGD |
PMID:22675208 |
MGI:5429471 |
NCBI chr 4:131,559,599...132,155,092
Ensembl chr 4:131,564,756...132,112,258
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G |
Foxp4 |
forkhead box P4 |
acts_upstream_of_or_within |
ISO |
MGI:1344405|MGI:1914004 (MGI:5429471|PMID:22675208) |
RGD |
PMID:22675208 |
MGI:5429471 |
NCBI chr 9:13,058,506...13,115,406
Ensembl chr 9:13,058,476...13,114,879
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G |
Cebpb |
CCAAT/enhancer binding protein beta |
involved_in |
IDA |
PMID:15308669 |
UniProt |
PMID:15308669 |
RGD:1599801 |
NCBI chr 3:156,398,035...156,399,466
Ensembl chr 3:156,397,052...156,399,473
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G |
Dspp |
dentin sialophosphoprotein |
involved_in |
IDA |
PMID:15308669 |
UniProt |
PMID:15308669 |
RGD:1599801 |
NCBI chr14:5,565,562...5,571,669
Ensembl chr14:5,565,629...5,571,672
|
|
G |
Nfe2l1 |
NFE2 like bZIP transcription factor 1 |
involved_in |
ISO |
(PMID:15308669) |
RGD |
PMID:15308669 |
|
NCBI chr10:81,796,055...81,812,926
Ensembl chr10:81,800,366...81,832,318
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|
G |
Bmal1 |
basic helix-loop-helix ARNT like 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:4819446|PMID:20562852) |
UniProt RGD |
PMID:20562852 |
GO_REF:0000024 MGI:4819446 |
NCBI chr 1:167,331,756...167,430,235
Ensembl chr 1:167,331,633...167,430,231
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|
G |
Clock |
clock circadian regulator |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (MGI:4819446|PMID:20562852) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:20562852 |
GO_REF:0000024 GO_REF:0000107 MGI:4819446 |
NCBI chr14:31,908,542...31,992,673
Ensembl chr14:31,908,566...31,990,400
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G |
Rheb |
Ras homolog, mTORC1 binding |
involved_in |
ISO |
(PMID:19258434) |
RGD |
PMID:19258434 |
|
NCBI chr 4:10,278,970...10,320,160
Ensembl chr 4:10,279,370...10,320,160
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|
G |
Foxa1 |
forkhead box A1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2384404 (MGI:3603077|PMID:15987773) |
Ensembl RGD |
PMID:15987773 |
GO_REF:0000107 MGI:3603077 |
NCBI chr 6:75,099,907...75,136,534
Ensembl chr 6:75,103,503...75,136,188
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|
G |
Notch1 |
notch receptor 1 |
acts_upstream_of_or_within |
ISO |
MGI:1933835 (MGI:3612808|PMID:16360140) |
RGD |
PMID:16360140 |
MGI:3612808 |
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
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|
G |
Rxra |
retinoid X receptor alpha |
acts_upstream_of_or_within |
ISO |
MGI:2385918 (MGI:2385387|PMID:12183441) |
RGD |
PMID:12183441 |
MGI:2385387 |
NCBI chr 3:10,989,832...11,076,366
Ensembl chr 3:10,989,832...11,073,712
|
|
G |
Wdr77 |
WD repeat domain 77 |
acts_upstream_of_or_within |
ISO |
MGI:3798419 (MGI:3797478|PMID:17032745) |
RGD |
PMID:17032745 |
MGI:3797478 |
NCBI chr 2:193,435,465...193,445,534
Ensembl chr 2:193,435,468...193,445,520
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|
|
G |
Fgfr2 |
fibroblast growth factor receptor 2 |
acts_upstream_of_or_within |
ISO |
MGI:3044679 (MGI:3703455|PMID:17215304) |
RGD |
PMID:17215304 |
MGI:3703455 |
NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626
|
|
G |
Tp63 |
tumor protein p63 |
acts_upstream_of_or_within |
ISO |
MGI:1934580 (MGI:3487217|PMID:15371309) |
RGD |
PMID:15371309 |
MGI:3487217 |
NCBI chr11:74,838,858...75,049,764
Ensembl chr11:74,838,859...75,049,398
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|
|
G |
Ascl1 |
achaete-scute family bHLH transcription factor 1 |
acts_upstream_of_or_within |
ISO |
MGI:1857470 (MGI:3804618|PMID:18173746) |
RGD |
PMID:18173746 |
MGI:3804618 |
NCBI chr 7:21,904,153...21,906,003
Ensembl chr 7:21,903,126...21,905,993
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G |
Hes1 |
hes family bHLH transcription factor 1 |
acts_upstream_of involved_in |
ISO IEA |
MGI:2149672 (MGI:3804618|PMID:18173746) GO_REF:0000107 |
RGD Ensembl |
PMID:18173746 |
GO_REF:0000107 MGI:3804618 |
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
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|
|
G |
Bmp2 |
bone morphogenetic protein 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (MGI:1202291|PMID:9463347) |
Ensembl RGD |
PMID:9463347 |
GO_REF:0000107 MGI:1202291 |
NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
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G |
Fgf2 |
fibroblast growth factor 2 |
acts_upstream_of_or_within |
ISO |
(MGI:1202291|PMID:9463347) |
RGD |
PMID:9463347 |
MGI:1202291 |
NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221
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|
G |
Fgf8 |
fibroblast growth factor 8 |
acts_upstream_of_or_within |
ISO |
(MGI:1202291|PMID:9463347) |
RGD |
PMID:9463347 |
MGI:1202291 |
NCBI chr 1:244,584,477...244,590,359
Ensembl chr 1:244,584,652...244,590,359
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|
G |
Gata2 |
GATA binding protein 2 |
acts_upstream_of_or_within |
ISO |
MGI:2179995|MGI:3628639 (MGI:3625416|PMID:16543408) |
RGD |
PMID:16543408 |
MGI:3625416 |
NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761
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|
G |
Lhx3 |
LIM homeobox 3 |
acts_upstream_of_or_within |
ISO |
MGI:2385819 (MGI:80537|PMID:8638120) |
RGD |
PMID:8638120 |
MGI:80537 |
NCBI chr 3:9,026,432...9,035,122
Ensembl chr 3:9,027,425...9,034,480
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|
G |
Wnt4 |
Wnt family member 4 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1857453 (MGI:3777488|PMID:18351662) |
Ensembl RGD |
PMID:18351662 |
GO_REF:0000107 MGI:3777488 |
NCBI chr 5:149,513,573...149,535,415
Ensembl chr 5:149,514,018...149,532,859
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|
|
G |
Bmp4 |
bone morphogenetic protein 4 |
involved_in |
ISO IEA ISS |
(PMID:11865031) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:11865031 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
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|
G |
Bmp5 |
bone morphogenetic protein 5 |
involved_in |
ISO |
(PMID:11865031) |
RGD |
PMID:11865031 |
|
NCBI chr 8:76,517,164...76,639,925
Ensembl chr 8:76,517,164...76,639,925
|
|
G |
Bmp6 |
bone morphogenetic protein 6 |
involved_in |
ISO |
(PMID:11865031) |
RGD |
PMID:11865031 |
|
NCBI chr17:26,318,121...26,469,034
Ensembl chr17:26,318,569...26,470,365
|
|
G |
Cdh2 |
cadherin 2 |
involved_in |
IEA ISO ISS |
GO_REF:0000107 (MGI:6216737|PMID:26750727) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:26750727 |
GO_REF:0000024 GO_REF:0000107 MGI:6216737 |
NCBI chr18:7,776,704...7,990,934
Ensembl chr18:7,776,704...7,990,167
|
|
G |
Cdk6 |
cyclin-dependent kinase 6 |
involved_in |
ISO |
(PMID:20668294) |
RGD |
PMID:20668294 |
|
NCBI chr 4:30,637,650...30,829,688
Ensembl chr 4:30,646,460...30,829,634
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|
G |
Dll1 |
delta like canonical Notch ligand 1 |
involved_in |
IEA ISO ISS |
GO_REF:0000107 (MGI:5426345|PMID:22529374) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:22529374 |
GO_REF:0000024 GO_REF:0000107 MGI:5426345 |
NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
|
|
G |
Insm1 |
INSM transcriptional repressor 1 |
acts_upstream_of_or_within |
ISO |
MGI:3656035 (MGI:3655758|PMID:16951258) |
RGD |
PMID:16951258 |
MGI:3655758 |
NCBI chr 3:133,639,790...133,642,963
Ensembl chr 3:133,639,580...133,643,003
|
|
G |
Mir214 |
microRNA 214 |
acts_upstream_of_or_within |
ISO |
(MGI:3775688|PMID:17804764) |
RGD |
PMID:17804764 |
MGI:3775688 |
NCBI chr13:74,588,374...74,588,481
Ensembl chr13:74,588,372...74,588,481
|
|
G |
Mir375 |
microRNA 375 |
acts_upstream_of_or_within |
ISO |
(MGI:3775688|PMID:17804764) |
RGD |
PMID:17804764 |
MGI:3775688 |
NCBI chr 9:76,457,911...76,457,985
Ensembl chr 9:76,457,911...76,457,985
|
|
G |
Mir503 |
microRNA 503 |
acts_upstream_of_or_within |
ISO |
(MGI:3775688|PMID:17804764) |
RGD |
PMID:17804764 |
MGI:3775688 |
NCBI chr X:132,806,303...132,806,373
Ensembl chr X:132,806,303...132,806,373
|
|
G |
Mir541 |
microRNA 541 |
acts_upstream_of_or_within |
ISO |
(MGI:3775688|PMID:17804764) |
RGD |
PMID:17804764 |
MGI:3775688 |
NCBI chr 6:128,757,016...128,757,105
Ensembl chr 6:128,757,016...128,757,105
|
|
G |
Nkx2-2 |
NK2 homeobox 2 |
acts_upstream_of_or_within |
ISO |
MGI:1932100 (MGI:3703458|PMID:17202186), (MGI:3761395|PMID:17456846) |
RGD |
PMID:17202186 PMID:17456846 |
MGI:3703458 MGI:3761395 |
NCBI chr 3:134,619,701...134,630,282
Ensembl chr 3:134,620,039...134,622,411
|
|
G |
Nkx6-1 |
NK6 homeobox 1 |
|
IEP |
|
RGD |
PMID:9603781 |
RGD:2326025 |
NCBI chr14:7,969,756...7,976,689
Ensembl chr14:7,969,756...7,976,681
|
|
G |
Pdpk1 |
3-phosphoinositide dependent protein kinase-1 |
involved_in |
ISO |
(MGI:4365695|PMID:19635472) |
RGD |
PMID:19635472 |
MGI:4365695 |
NCBI chr10:13,105,435...13,182,664
Ensembl chr10:13,105,498...13,174,623
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Sidt2 |
SID1 transmembrane family, member 2 |
acts_upstream_of_or_within |
ISO |
MGI:5532825 (MGI:5529865|PMID:23776622) |
RGD |
PMID:23776622 |
MGI:5529865 |
NCBI chr 8:46,232,379...46,248,913
Ensembl chr 8:46,232,383...46,248,700
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Smo |
smoothened, frizzled class receptor |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2176256|MGI:2684317 (MGI:4833770|PMID:20185815) |
Ensembl RGD |
PMID:20185815 |
GO_REF:0000107 MGI:4833770 |
NCBI chr 4:58,344,101...58,372,828
Ensembl chr 4:58,343,529...58,373,829
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Wnt5a |
Wnt family member 5A |
acts_upstream_of_or_within |
ISO |
MGI:1857617 (MGI:3663526|PMID:16246260) |
RGD |
PMID:16246260 |
MGI:3663526 |
NCBI chr16:3,695,667...3,718,234
Ensembl chr16:3,697,032...3,718,234
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Gata6 |
GATA binding protein 6 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (MGI:3701716|PMID:16887115) |
Ensembl RGD |
PMID:16887115 |
GO_REF:0000107 MGI:3701716 |
NCBI chr18:2,188,121...2,219,532
Ensembl chr18:2,188,121...2,219,532
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Insm1 |
INSM transcriptional repressor 1 |
involved_in acts_upstream_of_or_within |
ISO |
(MGI:3619850|PMID:16511571) |
RGD |
PMID:16511571 |
MGI:3619850 |
NCBI chr 3:133,639,790...133,642,963
Ensembl chr 3:133,639,580...133,643,003
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Men1 |
menin 1 |
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IMP |
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RGD |
PMID:24157940 |
RGD:9589069 |
NCBI chr 1:203,638,905...203,644,871
Ensembl chr 1:203,639,000...203,644,871
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Mir7-1 |
microRNA 7-1 |
acts_upstream_of_or_within |
ISO |
(MGI:5437569|PMID:22764048) |
RGD |
PMID:22764048 |
MGI:5437569 |
NCBI chr17:6,273,264...6,273,360
Ensembl chr17:6,273,264...6,273,360
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Nkx2-2 |
NK2 homeobox 2 |
acts_upstream_of |
ISO |
MGI:1932100 (MGI:2686854|PMID:14729487) |
RGD |
PMID:14729487 |
MGI:2686854 |
NCBI chr 3:134,619,701...134,630,282
Ensembl chr 3:134,620,039...134,622,411
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Nkx6-1 |
NK6 homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:2386119 (MGI:3579924|PMID:15944193) |
RGD |
PMID:15944193 |
MGI:3579924 |
NCBI chr14:7,969,756...7,976,689
Ensembl chr14:7,969,756...7,976,681
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Onecut1 |
one cut homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:2179340 (MGI:1859126|PMID:10825208) |
RGD |
PMID:10825208 |
MGI:1859126 |
NCBI chr 8:75,599,432...75,633,598
Ensembl chr 8:75,599,740...75,627,277
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Pax4 |
paired box 4 |
acts_upstream_of |
ISO |
MGI:2182122 (MGI:2686854|PMID:14729487) |
RGD |
PMID:14729487 |
MGI:2686854 |
NCBI chr 4:57,058,453...57,065,995
Ensembl chr 4:57,058,462...57,063,408
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Pax6 |
paired box 6 |
acts_upstream_of_or_within involved_in |
IMP ISO IEA |
MGI:1934347 (MGI:5437569|PMID:22764048) GO_REF:0000107 |
RGD Ensembl |
PMID:22764048 PMID:22403172 |
GO_REF:0000107 MGI:5437569, RGD:8552355 |
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
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Pdx1 |
pancreatic and duodenal homeobox 1 |
involved_in acts_upstream_of_or_within |
IMP IBA ISO |
PMID:21108535 PMID:21873635 MGI:2181362 (MGI:3612374|PMID:16418487) (PMID:12124776), (PMID:24567802) |
RGD |
PMID:12124776 PMID:16418487 PMID:24567802 PMID:21108535 PMID:21873635 |
MGI:3612374, RGD:8553608, RGD:13792537 |
NCBI chr12:7,757,865...7,763,064
Ensembl chr12:7,757,865...7,763,064
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Reg1a |
regenerating family member 1 alpha |
involved_in |
ISO |
MGI:2446480 (MGI:3615755|PMID:16405968) |
RGD |
PMID:16405968 |
MGI:3615755 |
NCBI chr 4:110,892,451...110,895,115
Ensembl chr 4:110,892,453...110,895,570
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Rfx6 |
regulatory factor X, 6 |
involved_in |
ISO |
(MGI:4422104|PMID:20148032) |
RGD |
PMID:20148032 |
MGI:4422104 |
NCBI chr20:31,020,221...31,073,266
Ensembl chr20:31,019,829...31,073,147
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Vhl |
von Hippel-Lindau tumor suppressor |
acts_upstream_of_or_within |
ISO |
MGI:2136645|MGI:3608931 (MGI:5618205|PMID:25186293) |
RGD |
PMID:25186293 |
MGI:5618205 |
NCBI chr 4:146,772,483...146,779,376
Ensembl chr 4:146,772,468...146,779,377
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Nkx2-2 |
NK2 homeobox 2 |
acts_upstream_of_or_within |
ISO |
MGI:1932100 (MGI:3703458|PMID:17202186), (MGI:3768695|PMID:17988662) |
RGD |
PMID:17202186 PMID:17988662 |
MGI:3703458 MGI:3768695 |
NCBI chr 3:134,619,701...134,630,282
Ensembl chr 3:134,620,039...134,622,411
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Bhlha15 |
basic helix-loop-helix family, member a15 |
acts_upstream_of_or_within |
ISO |
MGI:2182768 (MGI:3611530|PMID:16423820) |
RGD |
PMID:16423820 |
MGI:3611530 |
NCBI chr12:10,420,465...10,424,641
Ensembl chr12:10,420,467...10,424,713
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Gdf11 |
growth differentiation factor 11 |
acts_upstream_of_or_within |
ISO |
MGI:2449672 (MGI:3512831|PMID:15548585) |
RGD |
PMID:15548585 |
MGI:3512831 |
NCBI chr 7:1,311,732...1,325,211
Ensembl chr 7:1,311,732...1,320,725
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Rfx3 |
regulatory factor X3 |
involved_in |
ISO |
(MGI:4941444|PMID:20413507) |
RGD |
PMID:20413507 |
MGI:4941444 |
NCBI chr 1:225,449,872...225,709,622
Ensembl chr 1:225,456,187...225,709,402
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