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ONTOLOGY REPORT - ANNOTATIONS

Term:hydroxylysine metabolic process
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Accession:GO:0046946 term browser browse the term
Definition:The chemical reactions and pathways involving hydroxylysine (5-hydroxy-2,6-diaminohexanoic acid), a chiral alpha-amino acid. Hydroxylysine is found in collagen and commonly has galactose and then glucose added sequentially by glycosyltransferases.
Synonyms:exact_synonym: hydroxylysine metabolism


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hydroxylysine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plod2 procollagen lysine, 2-oxoglutarate 5-dioxygenase 2 involved_in ISO
IEA		 (PMID:10934207)
GO_REF:0000107		 RGD
Ensembl		 PMID:10934207 GO_REF:0000107 NCBI chr 8:93,084,548...93,167,255
Ensembl chr 8:93,084,513...93,167,255 		JBrowse link
G Plod3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 involved_in ISO
IEA		 (MGI:6202004|PMID:16447251)
GO_REF:0000107		 RGD
Ensembl		 PMID:16447251 GO_REF:0000107 MGI:6202004 NCBI chr12:19,676,384...19,686,945
Ensembl chr12:19,676,386...19,686,960 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19692
    metabolic process 11456
      cellular metabolic process 9554
        cellular modified amino acid metabolic process 181
          hydroxylysine metabolic process 2
            hydroxylysine biosynthetic process 2
            hydroxylysine catabolic process 0
Path 2
Term Annotations click to browse term
  biological_process 19692
    metabolic process 11456
      cellular metabolic process 9554
        organic acid metabolic process 1021
          oxoacid metabolic process 1010
            carboxylic acid metabolic process 995
              alpha-amino acid metabolic process 210
                L-amino acid metabolic process 177
                  aspartate family amino acid metabolic process 43
                    hydroxylysine metabolic process 2
                      hydroxylysine biosynthetic process 2
                      hydroxylysine catabolic process 0
paths to the root