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ONTOLOGY REPORT - ANNOTATIONS


Term:hydroxylysine biosynthetic process
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Accession:GO:0046947 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of hydroxylysine (5-hydroxy-2,6-diaminohexanoic acid), a chiral alpha-amino acid.
Synonyms:exact_synonym: hydroxylysine anabolism;   hydroxylysine biosynthesis;   hydroxylysine formation;   hydroxylysine synthesis


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hydroxylysine biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plod2 procollagen lysine, 2-oxoglutarate 5-dioxygenase 2 IEA
ISO
GO_REF:0000107
(PMID:10934207)
Ensembl
RGD
PMID:10934207 GO_REF:0000107 NCBI chr 8:99,977,334...100,059,736
Ensembl chr 8:99,977,334...100,059,736
JBrowse link
G Plod3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 ISO (MGI:6202004|PMID:16447251) RGD PMID:16447251 MGI:6202004 NCBI chr12:22,716,421...22,726,982
Ensembl chr12:22,716,423...22,726,982
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    metabolic process 12263
      cellular metabolic process 11073
        cellular modified amino acid metabolic process 190
          hydroxylysine metabolic process 2
            hydroxylysine biosynthetic process 2
Path 2
Term Annotations click to browse term
  biological_process 20020
    metabolic process 12263
      cellular metabolic process 11073
        organic acid metabolic process 1008
          oxoacid metabolic process 970
            carboxylic acid metabolic process 951
              cellular amino acid metabolic process 268
                alpha-amino acid metabolic process 190
                  aspartate family amino acid metabolic process 41
                    aspartate family amino acid biosynthetic process 22
                      hydroxylysine biosynthetic process 2
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.