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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular modified amino acid metabolic process
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Accession:GO:0006575 term browser browse the term
Definition:The chemical reactions and pathways involving compounds derived from amino acids, organic acids containing one or more amino substituents.
Synonyms:exact_synonym: amino acid derivative metabolic process;   cellular amino acid derivative metabolic process;   cellular amino acid derivative metabolism;   cellular modified amino acid metabolism;   modified amino acid metabolic process;   modified amino acid metabolism


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cellular modified amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kyat1 kynurenine aminotransferase 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:8,752,289...8,785,617
Ensembl chr 3:8,752,625...8,766,433
JBrowse link
10-formyltetrahydrofolate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in ISO (PMID:1881876)
(MGI:5503248|PMID:23704330)
RGD PMID:1881876 PMID:23704330 MGI:5503248 NCBI chr 6:99,282,850...99,350,367
Ensembl chr 6:99,282,850...99,350,340
JBrowse link
G Mthfd1l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like involved_in ISO (PMID:12937168) RGD PMID:12937168 NCBI chr 1:40,529,092...40,719,232
Ensembl chr 1:40,529,045...40,719,391
JBrowse link
10-formyltetrahydrofolate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1l1 aldehyde dehydrogenase 1 family, member L1 involved_in IEA GO_REF:0000002
GO_REF:0000104
InterPro
UniProt
GO_REF:0000002 GO_REF:0000104 NCBI chr 4:123,516,553...123,564,067
Ensembl chr 4:123,516,788...123,557,501
JBrowse link
G Aldh1l2 aldehyde dehydrogenase 1 family, member L2 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 7:26,375,866...26,425,838
Ensembl chr 7:26,375,866...26,425,108
JBrowse link
10-formyltetrahydrofolate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mthfd2l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like IDA RGD PMID:21163947 RGD:7244288 NCBI chr14:18,640,274...18,721,298
Ensembl chr14:18,640,277...18,720,357
JBrowse link
4-hydroxyproline catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoga1 4-hydroxy-2-oxoglutarate aldolase 1 involved_in ISO (PMID:21998747) RGD PMID:21998747 NCBI chr 1:261,291,742...261,319,743
Ensembl chr 1:261,291,870...261,318,984
JBrowse link
amino-acid betaine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhmt betaine-homocysteine S-methyltransferase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 2:23,236,573...23,256,158
Ensembl chr 2:23,236,575...23,256,158
JBrowse link
G Dmgdh dimethylglycine dehydrogenase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 2:23,289,376...23,370,360
Ensembl chr 2:23,289,374...23,370,477
JBrowse link
amino-acid betaine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhmt betaine-homocysteine S-methyltransferase involved_in IEA
ISO
GO_REF:0000107
(PMID:18230605)
Ensembl
RGD
PMID:18230605 GO_REF:0000107 NCBI chr 2:23,236,573...23,256,158
Ensembl chr 2:23,236,575...23,256,158
JBrowse link
G Bhmt2 betaine-homocysteine S-methyltransferase 2 NOT|involved_in ISO (PMID:18230605) RGD PMID:18230605 NCBI chr 2:23,272,320...23,289,266
Ensembl chr 2:23,272,328...23,289,266
JBrowse link
argininosuccinate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asl argininosuccinate lyase IDA RGD PMID:8586639, PMID:4062872 RGD:1599287, RGD:2300098 NCBI chr12:30,160,922...30,178,348
Ensembl chr12:30,165,694...30,178,341
JBrowse link
G Ass1 argininosuccinate synthase 1 involved_in IDA
IBA
ISO
PMID:21873635
(PMID:7977368)
RGD PMID:7977368, PMID:4062872, PMID:21873635 RGD:2300098, RGD:13792537 NCBI chr 3:10,327,411...10,375,847
Ensembl chr 3:10,327,414...10,375,826
JBrowse link
carnitine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadm acyl-CoA dehydrogenase medium chain involved_in ISO
IEA
(PMID:16972171)
GO_REF:0000107
RGD
Ensembl
PMID:16972171 GO_REF:0000107 NCBI chr 2:260,124,418...260,148,589
Ensembl chr 2:260,124,418...260,148,589
JBrowse link
G Aldh9a1 aldehyde dehydrogenase 9 family, member A1 involved_in TAS
IEA
GO_REF:0000041 UniProt PMID:10702312 GO_REF:0000041, RGD:68317 NCBI chr13:85,580,828...85,597,497
Ensembl chr13:85,580,828...85,597,493
JBrowse link
G Bbox1 gamma-butyrobetaine hydroxylase 1 involved_in TAS
ISS
IBA
ISO
IEA
PMID:9753662
PMID:21873635
GO_REF:0000024
(PMID:20599753), (PMID:9753662)
GO_REF:0000041
UniProt
RGD
PMID:9753662 PMID:20599753, PMID:10526231, PMID:9753662, PMID:21873635 GO_REF:0000024 GO_REF:0000041, RGD:632240, RGD:8554503, RGD:13792537 NCBI chr 3:101,425,684...101,474,848
Ensembl chr 3:101,427,055...101,474,890
JBrowse link
G Tmlhe trimethyllysine hydroxylase, epsilon acts_upstream_of_or_within
involved_in
TAS
ISO
IEA
IBA
ISS
(MGI:2183690|PMID:12121276)
GO_REF:0000041
PMID:21873635
GO_REF:0000024
(PMID:15754339)
(PMID:23092983)
RGD
UniProt
PMID:12121276 PMID:15754339 PMID:23092983, PMID:11431483, PMID:21873635 GO_REF:0000024 GO_REF:0000041 MGI:2183690, RGD:70558, RGD:13792537 NCBI chr20:237,461...285,125
Ensembl chr20:237,506...284,943
JBrowse link
carnitine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadl acyl-CoA dehydrogenase, long chain involved_in ISO (MGI:1321427|PMID:9861014) RGD PMID:9861014 MGI:1321427 NCBI chr 9:73,833,368...73,871,857
Ensembl chr 9:73,833,388...73,871,888
JBrowse link
carnitine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadm acyl-CoA dehydrogenase medium chain acts_upstream_of_or_within ISO MGI:3692446 (MGI:3692159|PMID:16121256) RGD PMID:16121256 MGI:3692159 NCBI chr 2:260,124,418...260,148,589
Ensembl chr 2:260,124,418...260,148,589
JBrowse link
G Aldh9a1 aldehyde dehydrogenase 9 family, member A1 acts_upstream_of_or_within ISO (MGI:1861370|PMID:10702312) RGD PMID:10702312 MGI:1861370 NCBI chr13:85,580,828...85,597,497
Ensembl chr13:85,580,828...85,597,493
JBrowse link
G Cpt1a carnitine palmitoyltransferase 1A involved_in TAS
IDA
IBA
ISO
PMID:21990363
PMID:21873635
(PMID:11350182)
RGD PMID:11350182, PMID:12826662, PMID:21990363, PMID:21873635 RGD:1298786, RGD:8554544, RGD:13792537 NCBI chr 1:218,568,157...218,629,679
Ensembl chr 1:218,569,510...218,629,678
JBrowse link
G Cpt1b carnitine palmitoyltransferase 1B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:130,395,211...130,404,731
Ensembl chr 7:130,395,194...130,405,347
JBrowse link
G Cpt1c carnitine palmitoyltransferase 1c involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:18192268, PMID:21873635 RGD:2317579, RGD:13792537 NCBI chr 1:100,955,094...100,970,579
Ensembl chr 1:100,955,095...100,969,560
JBrowse link
G Cpt2 carnitine palmitoyltransferase 2 involved_in ISO
IEA
ISS
(PMID:20538056)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:20538056 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:127,505,646...127,523,016
Ensembl chr 5:127,505,614...127,523,089
JBrowse link
G Crot carnitine O-octanoyltransferase involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5546000|PMID:15492013)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:15492013 GO_REF:0000024 GO_REF:0000107 MGI:5546000 NCBI chr 4:22,079,837...22,116,265
Ensembl chr 4:22,081,604...22,116,265
JBrowse link
G Por cytochrome p450 oxidoreductase IEP RGD PMID:16616465 RGD:4889829 NCBI chr12:23,998,411...24,017,063
Ensembl chr12:23,998,411...24,046,814
JBrowse link
G Slc22a4 solute carrier family 22 member 4 acts_upstream_of_or_within ISO UniProtKB:Q9H015 (MGI:1352952|PMID:10655497) RGD PMID:10655497 MGI:1352952 NCBI chr10:39,334,972...39,373,508 JBrowse link
G Slc22a5 solute carrier family 22 member 5 acts_upstream_of_or_within ISO MGI:1856926 (MGI:3606365|PMID:15240869), (MGI:3692809|PMID:17027329), (MGI:61916|PMID:8325377), (MGI:67915|PMID:7914432), (MGI:78309|PMID:1996978) RGD PMID:1996978 PMID:7914432 PMID:8325377 PMID:15240869 PMID:17027329 MGI:3606365 MGI:3692809 MGI:61916 MGI:67915 MGI:78309 NCBI chr10:39,201,101...39,228,090
Ensembl chr10:39,201,107...39,323,853
JBrowse link
carnitine metabolic process, CoA-linked term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadl acyl-CoA dehydrogenase, long chain involved_in IBA
ISO
PMID:21873635
(MGI:1321427|PMID:9861014)
RGD PMID:9861014, PMID:21873635 MGI:1321427, RGD:13792537 NCBI chr 9:73,833,368...73,871,857
Ensembl chr 9:73,833,388...73,871,888
JBrowse link
G Acadm acyl-CoA dehydrogenase medium chain involved_in ISO
IEA
(PMID:16972171)
GO_REF:0000107
(MGI:4412440|PMID:18459129)
RGD
Ensembl
PMID:16972171 PMID:18459129 GO_REF:0000107 MGI:4412440 NCBI chr 2:260,124,418...260,148,589
Ensembl chr 2:260,124,418...260,148,589
JBrowse link
G Crat carnitine O-acetyltransferase involved_in ISO
ISS
IEA
IBA
(PMID:15099582), (PMID:23485643), (PMID:2351134)
GO_REF:0000024
GO_REF:0000107
PMID:21873635
RGD
UniProt
Ensembl
PMID:2351134 PMID:15099582 PMID:23485643, PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr 3:8,967,984...8,981,959
Ensembl chr 3:8,968,417...8,981,362
JBrowse link
creatine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gamt guanidinoacetate N-methyltransferase acts_upstream_of_or_within
involved_in
IDA
ISO
IBA
IEA
TAS
MGI:3044282 (MGI:3043413|PMID:15028668)
PMID:21873635
(PMID:8651275)
GO_REF:0000041
RGD
UniProt
PMID:8651275 PMID:15028668, PMID:15533043, PMID:21873635, PMID:12079381 GO_REF:0000041 MGI:3043413, RGD:1359081, RGD:13792537, RGD:632754 NCBI chr 7:12,314,848...12,317,998
Ensembl chr 7:12,314,848...12,317,998
JBrowse link
G Gatm glycine amidinotransferase involved_in TAS
IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt PMID:8021264, PMID:21873635 GO_REF:0000041, RGD:70746, RGD:13792537 NCBI chr 3:114,711,570...114,728,155
Ensembl chr 3:114,711,562...114,728,410
JBrowse link
creatine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gatm glycine amidinotransferase involved_in ISO (PMID:26490222) RGD PMID:26490222 NCBI chr 3:114,711,570...114,728,155
Ensembl chr 3:114,711,562...114,728,410
JBrowse link
dihydrofolate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase IDA RGD PMID:8948466 RGD:5144056 NCBI chr 9:78,862,013...78,882,061
Ensembl chr 9:78,862,013...78,882,060
JBrowse link
G Dhfr dihydrofolate reductase involved_in IDA
IBA
ISO
PMID:21873635
(PMID:2303423), (PMID:23707606)
RGD PMID:2303423 PMID:23707606, PMID:11502523, PMID:21873635, PMID:3970530 RGD:1298877, RGD:13792537, RGD:2300196 NCBI chr 2:21,931,887...21,958,927
Ensembl chr 2:21,931,493...21,962,453
JBrowse link
folic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mthfs methenyltetrahydrofolate synthetase involved_in ISO (PMID:12764149) RGD PMID:12764149 NCBI chr 8:96,564,877...96,614,386
Ensembl chr 8:96,564,877...96,614,348
JBrowse link
G Pm20d2 peptidase M20 domain containing 2 NOT|involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:48,416,005...48,437,054
Ensembl chr 5:48,420,302...48,436,531
JBrowse link
folic acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhfr dihydrofolate reductase involved_in IBA
IDA
PMID:21873635
PMID:20424322
GO_Central
BHF-UCL
PMID:21873635, PMID:20424322 RGD:13792537, RGD:10054082 NCBI chr 2:21,931,887...21,958,927
Ensembl chr 2:21,931,493...21,962,453
JBrowse link
G Folr1 folate receptor alpha acts_upstream_of_or_within ISO MGI:2383986 (MGI:2669340|PMID:12854656) RGD PMID:12854656 MGI:2669340 NCBI chr 1:166,934,457...166,945,864
Ensembl chr 1:166,934,460...166,943,592
JBrowse link
G Gnmt glycine N-methyltransferase TAS RGD PMID:12054489 RGD:728472 NCBI chr 9:16,565,274...16,568,626
Ensembl chr 9:16,565,225...16,568,627
JBrowse link
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase involved_in ISS
ISO
GO_REF:0000024
(MGI:5512657|PMID:24074862)
(PMID:11466310)
UniProt
RGD
PMID:11466310 PMID:24074862 GO_REF:0000024 MGI:5512657 NCBI chr 1:37,743,089...37,774,485
Ensembl chr 1:37,743,147...37,774,015
JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 involved_in IBA
ISO
PMID:21873635
(PMID:11278996)
RGD PMID:11278996, PMID:21873635 RGD:13792537 NCBI chr10:47,030,813...47,059,216
Ensembl chr10:47,031,050...47,059,216
JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:70,824,718...70,829,822
Ensembl chr 7:70,824,715...70,829,815
JBrowse link
folic acid-containing compound biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fpgs folylpolyglutamate synthase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:11,717,667...11,729,694
Ensembl chr 3:11,717,667...11,723,327
JBrowse link
G Mthfs methenyltetrahydrofolate synthetase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:96,564,877...96,614,386
Ensembl chr 8:96,564,877...96,614,348
JBrowse link
folic acid-containing compound metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Folh1 folate hydrolase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:1934060|PMID:11210180)
Ensembl
RGD
PMID:11210180 GO_REF:0000107 MGI:1934060 NCBI chr 1:150,323,768...150,395,415
Ensembl chr 1:150,323,768...150,395,415
JBrowse link
G Fpgs folylpolyglutamate synthase involved_in ISO (PMID:3619447) RGD PMID:3619447 NCBI chr 3:11,717,667...11,729,694
Ensembl chr 3:11,717,667...11,723,327
JBrowse link
G Mthfd1l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like involved_in ISO (PMID:12937168) RGD PMID:12937168 NCBI chr 1:40,529,092...40,719,232
Ensembl chr 1:40,529,045...40,719,391
JBrowse link
glutathione biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gclc glutamate-cysteine ligase, catalytic subunit acts_upstream_of_or_within
involved_in
IMP
ISO
IBA
IEA
ISS
MGI:2387010 (MGI:1858542|PMID:10805773), (MGI:3607629|PMID:16081425)
PMID:21873635
GO_REF:0000041
(PMID:10395918), (PMID:12663448), (PMID:8104187), (PMID:9675072)
GO_REF:0000024
RGD
UniProt
PMID:8104187 PMID:9675072 PMID:10395918 PMID:10805773 PMID:12663448 PMID:16081425, PMID:16183645, PMID:21873635 GO_REF:0000024 GO_REF:0000041 MGI:1858542 MGI:3607629, RGD:1582661, RGD:13792537 NCBI chr 8:85,059,051...85,097,471
Ensembl chr 8:85,059,051...85,097,468
JBrowse link
G Gclm glutamate cysteine ligase, modifier subunit acts_upstream_of_or_within
involved_in
IMP
ISO
IEA
IBA
ISS
(MGI:3607629|PMID:16081425)
GO_REF:0000041
PMID:21873635
(PMID:10395918), (PMID:12081989), (PMID:9675072)
GO_REF:0000024
RGD
UniProt
PMID:9675072 PMID:10395918 PMID:12081989 PMID:16081425, PMID:16183645, PMID:21873635 GO_REF:0000024 GO_REF:0000041 MGI:3607629, RGD:1582661, RGD:13792537 NCBI chr 2:225,827,504...225,847,876
Ensembl chr 2:225,827,504...225,847,874
JBrowse link
G Ggt1 gamma-glutamyltransferase 1 involved_in IEA
ISO
GO_REF:0000043
(MGI:5294309|PMID:12468440)
UniProt
RGD
PMID:12468440 GO_REF:0000043 MGI:5294309 NCBI chr20:14,019,723...14,045,781
Ensembl chr20:14,019,723...14,025,068
JBrowse link
G Ggt5 gamma-glutamyltransferase 5 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:13,988,444...14,001,296 JBrowse link
G Ggt6 gamma-glutamyl transferase 6 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:58,995,253...58,998,431
Ensembl chr10:58,995,556...58,998,033
JBrowse link
G Ggt7 gamma-glutamyltransferase 7 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:151,005,960...151,029,941
Ensembl chr 3:151,006,531...151,032,302
JBrowse link
G Gss glutathione synthetase involved_in IDA
IEA
GO_REF:0000041 UniProt PMID:10964706 GO_REF:0000041, RGD:1599340 NCBI chr 3:151,076,254...151,106,557
Ensembl chr 3:151,076,254...151,106,557
JBrowse link
G Hagh hydroxyacyl glutathione hydrolase involved_in IEA
ISO
GO_REF:0000107
(PMID:8550579)
Ensembl
RGD
PMID:8550579 GO_REF:0000107 NCBI chr10:14,215,913...14,230,506
Ensembl chr10:14,216,155...14,230,515
JBrowse link
G Mgst2 microsomal glutathione S-transferase 2 involved_in ISO (PMID:8703034) RGD PMID:8703034 NCBI chr 2:140,708,396...140,727,381
Ensembl chr 2:140,708,397...140,727,281
JBrowse link
G Slc1a1 solute carrier family 1 member 1 involved_in ISO (MGI:6478075|PMID:12614333) RGD PMID:12614333 MGI:6478075 NCBI chr 1:246,955,017...247,035,159
Ensembl chr 1:246,954,980...247,037,056
JBrowse link
G Slc1a2 solute carrier family 1 member 2 involved_in ISO (MGI:6478075|PMID:12614333) RGD PMID:12614333 MGI:6478075 NCBI chr 3:92,518,679...92,665,731
Ensembl chr 3:92,640,752...92,665,644
JBrowse link
glutathione catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07044631.2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr20:13,988,442...14,001,269 JBrowse link
G Chac1 ChaC glutathione-specific gamma-glutamylcyclotransferase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:111,160,205...111,163,425
Ensembl chr 3:111,160,205...111,163,425
JBrowse link
G Chac2 ChaC glutathione specific gamma-glutamylcyclotransferase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:115,383,906...115,391,757
Ensembl chr14:115,383,910...115,391,652
JBrowse link
G Dpep1 dipeptidase 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:1203838|PMID:9560193)
UniProt
RGD
PMID:9560193 GO_REF:0000024 MGI:1203838 NCBI chr19:55,973,447...55,998,830
Ensembl chr19:55,982,740...55,998,208
JBrowse link
G Ggt1 gamma-glutamyltransferase 1 involved_in ISS
IEA
IBA
ISO
GO_REF:0000024
GO_REF:0000002
PMID:21873635
(PMID:17924658), (PMID:21447318)
UniProt
InterPro
RGD
PMID:17924658 PMID:21447318, PMID:21873635 GO_REF:0000002 GO_REF:0000024, RGD:13792537 NCBI chr20:14,019,723...14,045,781
Ensembl chr20:14,019,723...14,025,068
JBrowse link
G Ggt5 gamma-glutamyltransferase 5 involved_in ISO
IBA
ISS
(PMID:1676842), (PMID:21447318)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:1676842 PMID:21447318, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr20:13,988,444...14,001,296 JBrowse link
G Ggt7 gamma-glutamyltransferase 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:151,005,960...151,029,941
Ensembl chr 3:151,006,531...151,032,302
JBrowse link
glutathione deglycation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Park7 Parkinsonism associated deglycase involved_in IEA
ISO
GO_REF:0000107
(PMID:25416785)
Ensembl
RGD
PMID:25416785 GO_REF:0000107 NCBI chr 5:167,982,438...168,004,724
Ensembl chr 5:167,982,439...168,004,724
JBrowse link
glutathione metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC097845.1 involved_in IEA
IBA
GO_REF:0000002
PMID:21873635
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 Ensembl chr 2:210,745,897...210,749,991 JBrowse link
G Arl6ip5 ADP-ribosylation factor like GTPase 6 interacting protein 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:5315599 (MGI:3822097|PMID:18799673), (MGI:5315235|PMID:22210510)
Ensembl
RGD
PMID:18799673 PMID:22210510 GO_REF:0000107 MGI:3822097 MGI:5315235 NCBI chr 4:129,574,363...129,598,240
Ensembl chr 4:129,574,264...129,598,915
JBrowse link
G Atad1 ATPase family, AAA domain containing 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:251,234,702...251,386,996
Ensembl chr 1:251,235,508...251,387,002
JBrowse link
G Clic1 chloride intracellular channel 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:5,040,314...5,049,166
Ensembl chr20:5,040,337...5,049,166
JBrowse link
G Clic2 chloride intracellular channel 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:295,338...310,363
Ensembl chr20:295,250...310,380
JBrowse link
G Clic3 chloride intracellular channel 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:2,675,732...2,678,248
Ensembl chr 3:2,676,296...2,680,565
JBrowse link
G Clic5 chloride intracellular channel 5 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:19,121,676...19,372,673
Ensembl chr 9:19,121,677...19,372,673
JBrowse link
G Cth cystathionine gamma-lyase IMP RGD PMID:15683713 RGD:1600763 NCBI chr 2:264,266,959...264,293,040
Ensembl chr 2:264,266,984...264,293,046
JBrowse link
G Ctns cystinosin, lysosomal cystine transporter involved_in ISO (PMID:15956064) RGD PMID:15956064 NCBI chr10:59,749,250...59,772,475
Ensembl chr10:59,749,256...59,764,868
JBrowse link
G Eef1g eukaryotic translation elongation factor 1 gamma involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:225,163,391...225,173,997
Ensembl chr 1:225,163,391...225,173,995
JBrowse link
G Ethe1 ETHE1, persulfide dioxygenase involved_in IBA
ISO
PMID:21873635
(PMID:23144459)
RGD PMID:23144459, PMID:21873635 RGD:13792537 NCBI chr 1:81,457,008...81,472,061
Ensembl chr 1:81,456,984...81,472,097
JBrowse link
G G6pd glucose-6-phosphate dehydrogenase involved_in
acts_upstream_of_or_within
ISO (PMID:17516514), (PMID:2420826)
MGI:2183760 (MGI:2449252|PMID:12521604)
RGD PMID:2420826 PMID:12521604 PMID:17516514 MGI:2449252 NCBI chr  X:156,274,800...156,293,935
Ensembl chr  X:156,274,800...156,293,926
JBrowse link
G Gclc glutamate-cysteine ligase, catalytic subunit acts_upstream_of_or_within ISO MGI:2429419 (MGI:1928560|PMID:11118286) RGD PMID:11118286 MGI:1928560 NCBI chr 8:85,059,051...85,097,471
Ensembl chr 8:85,059,051...85,097,468
JBrowse link
G Gclm glutamate cysteine ligase, modifier subunit acts_upstream_of_or_within ISO MGI:2447852 (MGI:2447526|PMID:12384496) RGD PMID:12384496 MGI:2447526 NCBI chr 2:225,827,504...225,847,876
Ensembl chr 2:225,827,504...225,847,874
JBrowse link
G Gdap1 ganglioside-induced differentiation-associated-protein 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:1,328,963...1,347,946
Ensembl chr 5:1,328,913...1,347,921
JBrowse link
G Gdap1l1 ganglioside-induced differentiation-associated protein 1-like 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:159,823,791...159,843,260
Ensembl chr 3:159,823,878...159,842,278
JBrowse link
G Glo1 glyoxalase 1 IDA RGD PMID:8719777, PMID:8903102 RGD:1641958, RGD:1641959 NCBI chr20:9,273,589...9,291,608
Ensembl chr20:9,273,594...9,291,610
JBrowse link
G Gpx1 glutathione peroxidase 1 involved_in IDA
IEA
ISO
IBA
GO_REF:0000107
(PMID:12829378)
PMID:21873635
Ensembl
RGD
PMID:12829378, PMID:16140890, PMID:21873635 GO_REF:0000107, RGD:1624364, RGD:13792537 NCBI chr 8:117,117,430...117,118,528
Ensembl chr 8:117,117,430...117,118,522
JBrowse link
G Gpx3 glutathione peroxidase 3 IDA RGD PMID:16140890 RGD:1624364 NCBI chr10:40,247,436...40,255,423
Ensembl chr10:40,247,436...40,255,422
JBrowse link
G Gpx4 glutathione peroxidase 4 IDA RGD PMID:16140890 RGD:1624364 NCBI chr 7:12,516,357...12,519,154
Ensembl chr 7:12,516,352...12,519,154
JBrowse link
G Gsr glutathione-disulfide reductase involved_in IDA
IEA
IBA
GO_REF:0000002
PMID:21873635
InterPro PMID:237922, PMID:21873635 GO_REF:0000002, RGD:1625133, RGD:13792537 NCBI chr16:62,197,617...62,239,987
Ensembl chr16:62,197,617...62,241,361
JBrowse link
G Gsta1 glutathione S-transferase alpha 1 involved_in IEA
ISO
IBA
GO_REF:0000002
(PMID:20606271)
PMID:21873635
InterPro
RGD
PMID:20606271, PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 9:27,366,404...27,381,004
Ensembl chr 9:27,368,272...27,452,902
JBrowse link
G Gsta2 glutathione S-transferase alpha 2 involved_in IEA
IBA
GO_REF:0000002
PMID:21873635
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 8:85,640,081...85,645,621 JBrowse link
G Gsta3 glutathione S-transferase alpha 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:27,357,490...27,417,023
Ensembl chr 9:27,402,381...27,417,023
JBrowse link
G Gsta4 glutathione S-transferase alpha 4 involved_in ISO
IBA
(PMID:10329152)
PMID:21873635
RGD PMID:10329152, PMID:21873635 RGD:13792537 NCBI chr 8:85,497,557...85,514,732
Ensembl chr 8:85,497,557...85,518,879
JBrowse link
G Gsta5 glutathione S-transferase alpha 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:85,553,659...85,564,914
Ensembl chr 8:85,553,734...85,565,179
JBrowse link
G Gsta6 glutathione S-transferase alpha 6 involved_in ISS
IBA
GO_REF:0000024
PMID:21873635
UniProt PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 9:27,475,273...27,533,939
Ensembl chr 9:27,475,273...27,511,176
JBrowse link
G Gstk1 glutathione S-transferase kappa 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:2668784|PMID:12720545)
RGD PMID:12720545, PMID:21873635 MGI:2668784, RGD:13792537 NCBI chr 4:71,621,777...71,626,096
Ensembl chr 4:71,621,729...71,626,107
JBrowse link
G Gstm1 glutathione S-transferase mu 1 involved_in IMP
ISO
IDA
IEA
IBA
(PMID:8373352)
PMID:10229687
GO_REF:0000002
PMID:21873635
RGD
InterPro
PMID:8373352, PMID:12027896, PMID:10229687, PMID:21873635 GO_REF:0000002, RGD:2302181, RGD:70307, RGD:13792537 NCBI chr 2:210,803,869...210,809,461
Ensembl chr 2:210,803,869...210,809,306
JBrowse link
G Gstm2 glutathione S-transferase mu 2 involved_in IMP
IEA
ISO
IBA
GO_REF:0000107
GO_REF:0000002
(PMID:16549767), (PMID:2034681), (PMID:8373352)
PMID:21873635
Ensembl
InterPro
RGD
PMID:2034681 PMID:8373352 PMID:16549767, PMID:12027896, PMID:21873635 GO_REF:0000002 GO_REF:0000107, RGD:2302181, RGD:13792537 NCBI chr 2:210,778,041...210,782,807
Ensembl chr 2:210,720,704...210,782,856
JBrowse link
G Gstm3 glutathione S-transferase mu 3 involved_in IBA
ISO
ISS
PMID:21873635
(PMID:10587441), (PMID:8373352)
GO_REF:0000024
RGD
UniProt
PMID:8373352 PMID:10587441, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 2:210,685,204...210,688,273
Ensembl chr 2:210,685,197...210,688,272
JBrowse link
G Gstm3l glutathione S-transferase mu 3-like involved_in ISO
IBA
(PMID:10587441)
PMID:21873635
RGD PMID:10587441, PMID:21873635 RGD:13792537 NCBI chr 2:210,761,729...210,766,501
Ensembl chr 2:210,761,729...210,766,501
JBrowse link
G Gstm4 glutathione S-transferase mu 4 involved_in IBA
ISO
PMID:21873635
(PMID:8373352)
RGD PMID:8373352, PMID:21873635 RGD:13792537 NCBI chr 2:210,834,013...210,839,242
Ensembl chr 2:210,833,884...210,839,295
JBrowse link
G Gstm5 glutathione S-transferase, mu 5 involved_in IBA
ISO
ISS
PMID:21873635
(PMID:10587441), (PMID:8373352)
GO_REF:0000024
RGD
UniProt
PMID:8373352 PMID:10587441, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 2:210,685,338...210,688,133
Ensembl chr 2:210,685,197...210,688,272
JBrowse link
G Gstm6 glutathione S-transferase, mu 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:210,733,594...210,738,368
Ensembl chr 2:210,733,594...210,738,378
JBrowse link
G Gstm6l glutathione S-transferase, mu 6-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:210,698,155...210,703,265
Ensembl chr 2:210,698,155...210,703,606
JBrowse link
G Gstm7 glutathione S-transferase, mu 7 involved_in IBA
IEA
PMID:21873635
GO_REF:0000107
GO_REF:0000002
Ensembl
InterPro
PMID:21873635 GO_REF:0000002 GO_REF:0000107, RGD:13792537 NCBI chr 2:210,720,719...210,726,179
Ensembl chr 2:210,720,704...210,782,856
JBrowse link
G Gsto1 glutathione S-transferase omega 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:267,607,437...267,617,387
Ensembl chr 1:267,607,418...267,617,387
JBrowse link
G Gsto2 glutathione S-transferase omega 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:267,617,517...267,640,455
Ensembl chr 1:271,229,036...271,243,517
Ensembl chr 1:271,229,036...271,243,517
JBrowse link
G Gstp1 glutathione S-transferase pi 1 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:1540159)
(MGI:69635|PMID:7982937)
PMID:21873635
RGD PMID:1540159 PMID:7982937, PMID:21873635 MGI:69635, RGD:13792537 NCBI chr 1:219,291,679...219,294,147
Ensembl chr 1:219,291,679...219,294,147
JBrowse link
G Gstt1 glutathione S-transferase theta 1 involved_in
acts_upstream_of_or_within
IDA
ISO
IBA
PMID:20097269
MGI:3828088 (MGI:1327104|PMID:9854036), (MGI:2661478|PMID:12038961), (MGI:3828053|PMID:17827337), (MGI:80351|PMID:8670055)
(MGI:4836147|PMID:20097269)
PMID:21873635
(PMID:20097269), (PMID:9307035), (PMID:9434735)
RGD PMID:8670055 PMID:9307035 PMID:9434735 PMID:9854036 PMID:12038961 PMID:17827337 PMID:20097269, PMID:20097269, PMID:21873635 MGI:1327104 MGI:2661478 MGI:3828053 MGI:4836147 MGI:80351, RGD:8554299, RGD:13792537 NCBI chr20:13,799,102...13,816,527
Ensembl chr20:13,799,102...13,816,526
JBrowse link
G Gstt2 glutathione S-transferase, theta 2 involved_in IBA
IDA
PMID:21873635
PMID:12038961
GO_Central
MGI
PMID:21873635, PMID:12038961 RGD:13792537, RGD:8553858 NCBI chr20:13,760,810...13,764,481
Ensembl chr20:13,760,810...13,764,475
JBrowse link
G Gstt3 glutathione S-transferase, theta 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:13,817,795...13,825,475
Ensembl chr20:13,817,795...13,825,475
JBrowse link
G Gstt4 glutathione S-transferase, theta 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:13,778,185...13,784,813
Ensembl chr20:13,778,178...13,784,827
JBrowse link
G Gstz1 glutathione S-transferase zeta 1 involved_in IEA
IBA
ISO
GO_REF:0000002
PMID:21873635
(PMID:10739172)
InterPro
RGD
PMID:10739172, PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 6:111,176,798...111,187,246
Ensembl chr 6:111,176,798...111,187,244
JBrowse link
G Hagh hydroxyacyl glutathione hydrolase IDA RGD PMID:8719777, PMID:8903102 RGD:1641958, RGD:1641959 NCBI chr10:14,215,913...14,230,506
Ensembl chr10:14,216,155...14,230,515
JBrowse link
G Hbb hemoglobin subunit beta IDA RGD PMID:19963409 RGD:2325281 NCBI chr 1:168,971,269...168,972,680
Ensembl chr 1:168,971,274...168,972,725
JBrowse link
G Hmgn5 high mobility group nucleosome binding domain 5 acts_upstream_of_or_within ISO MGI:5588022 (MGI:5578301|PMID:24392144) RGD PMID:24392144 MGI:5578301 NCBI chr  X:80,134,557...80,142,902
Ensembl chr  X:80,134,557...80,142,902
JBrowse link
G Hpgds hematopoietic prostaglandin D synthase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:95,945,356...95,970,666
Ensembl chr 4:95,946,025...95,970,666
JBrowse link
G Idh1 isocitrate dehydrogenase (NADP(+)) 1 acts_upstream_of_or_within ISO (MGI:2389531|PMID:12031902) RGD PMID:12031902 MGI:2389531 NCBI chr 9:71,882,108...71,911,645
Ensembl chr 9:71,882,105...71,900,044
JBrowse link
G LOC103694879 glutathione S-transferase theta-2-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Mgst1 microsomal glutathione S-transferase 1 acts_upstream_of_or_within ISO (MGI:1855828|PMID:10767383) RGD PMID:10767383 MGI:1855828 NCBI chr 4:172,119,382...172,134,609
Ensembl chr 4:172,119,331...172,134,607
JBrowse link
G Mmachc metabolism of cobalamin associated C involved_in ISO (PMID:19801555), (PMID:22642810) RGD PMID:19801555 PMID:22642810 NCBI chr 5:135,555,587...135,561,723
Ensembl chr 5:135,555,565...135,561,914
JBrowse link
G Nat8 N-acetyltransferase 8 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000041
(PMID:20392701)
UniProt
RGD
PMID:20392701 GO_REF:0000024 GO_REF:0000041 NCBI chr 4:117,525,963...117,527,443 JBrowse link
G Nfe2l1 nuclear factor, erythroid 2-like 1 acts_upstream_of_or_within ISO MGI:3828165 (MGI:5662039|PMID:25092871) RGD PMID:25092871 MGI:5662039 NCBI chr10:84,686,762...84,699,313
Ensembl chr10:84,682,460...84,698,886
JBrowse link
G Oplah 5-oxoprolinase (ATP-hydrolysing) involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:117,353,951...117,394,205
Ensembl chr 7:117,353,786...117,369,159
JBrowse link
G Ptges2 prostaglandin E synthase 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:11,424,195...11,431,379
Ensembl chr 3:11,424,099...11,431,402
JBrowse link
G RGD1307603 similar to hypothetical protein MGC37914 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:219,309,593...219,312,240
Ensembl chr 1:219,309,592...219,312,240
JBrowse link
G RGD1562107 similar to class-alpha glutathione S-transferase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:27,311,229...27,324,452
Ensembl chr 9:27,311,886...27,324,158
JBrowse link
G Slc1a1 solute carrier family 1 member 1 involved_in
acts_upstream_of_or_within
ISO (MGI:6492418|PMID:28886095)
MGI:2655190 (MGI:3822097|PMID:18799673), (MGI:5465271|PMID:22732503)
RGD PMID:18799673 PMID:22732503 PMID:28886095 MGI:3822097 MGI:5465271 MGI:6492418 NCBI chr 1:246,955,017...247,035,159
Ensembl chr 1:246,954,980...247,037,056
JBrowse link
G Slc7a11 solute carrier family 7 member 11 acts_upstream_of_or_within ISO MGI:3608695 (MGI:3710059|PMID:17200146), (MGI:5469541|PMID:23085521) RGD PMID:17200146 PMID:23085521 MGI:3710059 MGI:5469541 NCBI chr 2:139,453,774...139,528,479
Ensembl chr 2:139,453,774...139,528,162
JBrowse link
G Sod1 superoxide dismutase 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:1857872 (MGI:3640408|PMID:16377630)
UniProt
RGD
PMID:16377630 GO_REF:0000024 MGI:3640408 NCBI chr11:30,363,282...30,368,858
Ensembl chr11:30,363,280...30,368,862
JBrowse link
G Sod2 superoxide dismutase 2 acts_upstream_of_or_within ISO MGI:1857344 (MGI:1332377|PMID:10049502) RGD PMID:10049502 MGI:1332377 NCBI chr 1:47,914,757...47,921,587
Ensembl chr 1:47,914,759...47,921,587
JBrowse link
G Txnrd3 thioredoxin reductase 3 acts_upstream_of_or_within ISO (MGI:2386187|PMID:11259642) RGD PMID:11259642 MGI:2386187 NCBI chr 4:121,612,332...121,650,543
Ensembl chr 4:121,612,332...121,650,571
JBrowse link
glycine betaine biosynthetic process from choline term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh7a1 aldehyde dehydrogenase 7 family, member A1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr18:51,619,007...51,651,267
Ensembl chr18:51,619,007...51,651,267
JBrowse link
G Chdh choline dehydrogenase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr16:6,078,083...6,109,386
Ensembl chr16:6,078,122...6,109,382
JBrowse link
hydroxylysine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plod2 procollagen lysine, 2-oxoglutarate 5-dioxygenase 2 involved_in ISO
IEA
(PMID:10934207)
GO_REF:0000107
RGD
Ensembl
PMID:10934207 GO_REF:0000107 NCBI chr 8:99,977,334...100,059,736
Ensembl chr 8:99,977,334...100,059,736
JBrowse link
G Plod3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 involved_in ISO (MGI:6202004|PMID:16447251) RGD PMID:16447251 MGI:6202004 NCBI chr12:22,716,421...22,726,982
Ensembl chr12:22,716,423...22,726,982
JBrowse link
pantothenate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vnn1 vanin 1 involved_in ISO
IBA
(PMID:11491533), (PMID:25478849)
PMID:21873635
RGD PMID:11491533 PMID:25478849, PMID:21873635 RGD:13792537 NCBI chr 1:22,614,832...22,625,134
Ensembl chr 1:22,614,783...22,625,204
JBrowse link
G Vnn3 vanin 3 involved_in IBA
ISO
PMID:21873635
(MGI:2149227|PMID:11491533)
RGD PMID:11491533, PMID:21873635 MGI:2149227, RGD:13792537 NCBI chr 1:22,649,114...22,661,376
Ensembl chr 1:22,649,081...22,661,377
JBrowse link
phosphatidylserine acyl-chain remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lpcat3 lysophosphatidylcholine acyltransferase 3 involved_in ISO
ISS
(PMID:18195019), (PMID:18772128), (PMID:18782225)
(MGI:6436389|PMID:18287005)
GO_REF:0000024
RGD
UniProt
PMID:18195019 PMID:18287005 PMID:18772128 PMID:18782225 GO_REF:0000024 MGI:6436389 NCBI chr 4:157,181,722...157,222,997
Ensembl chr 4:157,181,795...157,222,996
JBrowse link
G Lpcat4 lysophosphatidylcholine acyltransferase 4 involved_in ISO (PMID:18458083) RGD PMID:18458083 NCBI chr 3:103,725,762...103,733,888
Ensembl chr 3:103,726,238...103,733,354
JBrowse link
G Mboat1 membrane bound O-acyltransferase domain containing 1 involved_in ISO (PMID:18772128) RGD PMID:18772128 NCBI chr17:36,061,775...36,177,457
Ensembl chr17:36,061,775...36,177,457
JBrowse link
G Mboat2 membrane bound O-acyltransferase domain containing 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:18772128)
UniProt
RGD
PMID:18772128 GO_REF:0000024 NCBI chr 6:44,009,872...44,135,501
Ensembl chr 6:44,009,872...44,131,387
JBrowse link
G Pla2g2f phospholipase A2, group IIF involved_in ISO (PMID:11112443) RGD PMID:11112443 NCBI chr 5:157,192,047...157,217,265
Ensembl chr 5:157,193,053...157,199,441
JBrowse link
phosphatidylserine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plscr1 phospholipid scramblase 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:5284813|PMID:12509439)
Ensembl
RGD
PMID:12509439 GO_REF:0000107 MGI:5284813 NCBI chr 8:99,625,523...99,645,882
Ensembl chr 8:99,625,545...99,725,217
JBrowse link
G Ptdss1 phosphatidylserine synthase 1 involved_in ISO
IEA
(PMID:19014349)
GO_REF:0000041
RGD
UniProt
PMID:19014349 GO_REF:0000041 NCBI chr 7:71,294,140...71,356,153
Ensembl chr 7:71,293,388...71,356,153
JBrowse link
G Ptdss2 phosphatidylserine synthase 2 involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:19014349)
MGI:2447151 (MGI:2446765|PMID:12361952)
GO_REF:0000041
RGD
UniProt
PMID:12361952 PMID:19014349 GO_REF:0000041 MGI:2446765 NCBI chr 1:214,122,981...214,148,011
Ensembl chr 1:214,123,044...214,149,729
JBrowse link
G Slc27a1 solute carrier family 27 member 1 involved_in IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:19523918)
Ensembl
RGD
PMID:19523918, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr16:19,997,823...20,016,193
Ensembl chr16:19,999,112...20,016,190
JBrowse link
phosphatidylserine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd12 abhydrolase domain containing 12, lysophospholipase involved_in
acts_upstream_of_or_within
IBA
ISO
ISS
PMID:21873635
MGI:5487621 (MGI:5469248|PMID:23297193)
GO_REF:0000024
(PMID:30643283)
RGD
UniProt
PMID:23297193 PMID:30643283, PMID:21873635 GO_REF:0000024 MGI:5469248, RGD:13792537 NCBI chr 3:146,630,298...146,690,375
Ensembl chr 3:146,630,299...146,690,375
JBrowse link
G Abhd12b abhydrolase domain containing 12B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:92,568,975...92,596,327
Ensembl chr 6:92,568,975...92,596,327
JBrowse link
G Abhd16a abhydrolase domain containing 16A, phospholipase involved_in IEA
ISO
IBA
ISS
GO_REF:0000107
(MGI:5779796|PMID:25580854)
PMID:21873635
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:25580854, PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:5779796, RGD:13792537 NCBI chr20:5,080,070...5,094,935
Ensembl chr20:5,080,070...5,094,935
JBrowse link
G Abhd16b abhydrolase domain containing 16B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:176,985,900...176,987,797
Ensembl chr 3:176,985,900...176,987,796
JBrowse link
phosphatidylserine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lipc lipase C, hepatic type IDA RGD PMID:2223857 RGD:1600650 NCBI chr 8:77,272,582...77,398,485
Ensembl chr 8:77,272,570...77,398,248
JBrowse link
G Pla2g10 phospholipase A2, group X involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:2446974|PMID:12359733)
GO_REF:0000107
(PMID:12359733)
UniProt
RGD
Ensembl
PMID:12359733 GO_REF:0000024 GO_REF:0000107 MGI:2446974 NCBI chr10:1,509,732...1,520,970
Ensembl chr10:1,509,732...1,520,970
JBrowse link
G Pla2g15 phospholipase A2, group XV involved_in ISS
ISO
GO_REF:0000024
(PMID:29724779)
UniProt
RGD
PMID:29724779 GO_REF:0000024 NCBI chr19:38,129,666...38,146,958
Ensembl chr19:38,129,584...38,146,956
JBrowse link
G Pla2g3 phospholipase A2, group III involved_in ISO (PMID:28947740) RGD PMID:28947740 NCBI chr14:83,724,828...83,730,614
Ensembl chr14:83,724,933...83,730,614
JBrowse link
G Serinc1 serine incorporator 1 involved_in IDA PMID:16120614 HGNC-UCL PMID:16120614 RGD:8553290 NCBI chr20:38,966,016...38,985,056
Ensembl chr20:38,967,238...38,985,036
JBrowse link
G Serinc2 serine incorporator 2 involved_in IDA PMID:16120614 HGNC-UCL PMID:16120614 RGD:8553290 NCBI chr 5:148,470,060...148,492,232
Ensembl chr 5:148,470,061...148,492,232
JBrowse link
G Serinc3 serine incorporator 3 involved_in ISS PMID:16120614 HGNC-UCL PMID:16120614 RGD:8553290 NCBI chr 3:160,018,643...160,038,078
Ensembl chr 3:160,018,646...160,038,078
JBrowse link
G Serinc5 serine incorporator 5 involved_in IDA
IEA
PMID:16120614
GO_REF:0000002
InterPro PMID:16120614 GO_REF:0000002, RGD:8553290 NCBI chr 2:22,195,507...22,310,289
Ensembl chr 2:22,195,600...22,310,312
JBrowse link
phosphocreatine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ckb creatine kinase B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:136,142,956...136,145,838
Ensembl chr 6:136,142,956...136,145,837
JBrowse link
G Ckm creatine kinase, M-type acts_upstream_of_or_within
involved_in
TAS
ISO
IBA
IEA
IDA
(MGI:3513707|PMID:15601660)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:15601660, PMID:6209281, PMID:21873635, PMID:12069495 GO_REF:0000107 MGI:3513707, RGD:727227, RGD:13792537, RGD:1359082 NCBI chr 1:80,321,507...80,331,841
Ensembl chr 1:80,321,585...80,331,841
JBrowse link
G Ckmt1 creatine kinase, mitochondrial 1 involved_in IBA
IEA
PMID:21873635
GO_REF:0000002
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 3:113,318,559...113,324,459
Ensembl chr 3:113,318,563...113,324,461
JBrowse link
G Ckmt2 creatine kinase, mitochondrial 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:21,422,680...21,452,797
Ensembl chr 2:21,422,818...21,437,193
JBrowse link
positive regulation of glutathione biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 involved_in ISO (MGI:5616326|PMID:14978030) RGD PMID:14978030 MGI:5616326 NCBI chr 4:98,648,513...98,709,695
Ensembl chr 4:98,648,545...98,709,694
JBrowse link
G Nfe2l2 nuclear factor, erythroid 2-like 2 involved_in ISO (MGI:5616326|PMID:14978030) RGD PMID:14978030 MGI:5616326 NCBI chr 3:62,497,568...62,525,146
Ensembl chr 3:62,497,571...62,524,996
JBrowse link
positive regulation of L-dopa biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Park7 Parkinsonism associated deglycase involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:16731528)
Ensembl
ParkinsonsUK-UCL
RGD
PMID:16731528 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:167,982,438...168,004,724
Ensembl chr 5:167,982,439...168,004,724
JBrowse link
positive regulation of thyroid hormone generation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:19248180), (PMID:19723756)
UniProt
RGD
PMID:19248180 PMID:19723756 GO_REF:0000024 NCBI chr17:72,419,752...72,452,043
Ensembl chr17:72,429,618...72,450,681
JBrowse link
G Hpn hepsin involved_in ISS
ISO
GO_REF:0000024
(MGI:3719967|PMID:17620368)
UniProt
RGD
PMID:17620368 GO_REF:0000024 MGI:3719967 NCBI chr 1:89,534,112...89,549,575
Ensembl chr 1:89,534,106...89,543,967
JBrowse link
G Pax8 paired box 8 involved_in ISO
ISS
(PMID:15356023)
(MGI:3691903|PMID:12586753)
GO_REF:0000024
RGD
UniProt
PMID:12586753 PMID:15356023 GO_REF:0000024 MGI:3691903 NCBI chr 3:1,527,316...1,586,019
Ensembl chr 3:1,527,279...1,584,946
JBrowse link
G Slco1c1 solute carrier organic anion transporter family, member 1c1 involved_in ISO
IEA
(PMID:18566113)
GO_REF:0000107
RGD
Ensembl
PMID:18566113 GO_REF:0000107 NCBI chr 4:175,729,709...175,776,749
Ensembl chr 4:175,729,726...175,776,808
JBrowse link
regulation of glutathione biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc7a11 solute carrier family 7 member 11 acts_upstream_of_or_within ISO MGI:1857061 (MGI:3588610|PMID:16037214) RGD PMID:16037214 MGI:3588610 NCBI chr 2:139,453,774...139,528,479
Ensembl chr 2:139,453,774...139,528,162
JBrowse link
regulation of phosphatidylserine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mfsd2a major facilitator superfamily domain containing 2A acts_upstream_of ISO (MGI:6196220|PMID:30074985) RGD PMID:30074985 MGI:6196220 NCBI chr 5:140,642,865...140,657,759
Ensembl chr 5:140,642,885...140,657,745
JBrowse link
regulation of thyroid hormone generation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Duoxa1 dual oxidase maturation factor 1 acts_upstream_of_or_within ISO MGI:1914061 (MGI:5544584|PMID:22301785) RGD PMID:22301785 MGI:5544584 NCBI chr 3:114,241,057...114,251,720
Ensembl chr 3:114,241,057...114,251,647
JBrowse link
G Duoxa2 dual oxidase maturation factor 2 acts_upstream_of_or_within ISO MGI:2384861 (MGI:5544584|PMID:22301785) RGD PMID:22301785 MGI:5544584 NCBI chr 3:114,236,718...114,240,086
Ensembl chr 3:114,236,718...114,240,086
JBrowse link
S-adenosylhomocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahcy adenosylhomocysteinase acts_upstream_of_or_within IDA
ISO
(MGI:2183618|PMID:12023972) RGD PMID:12023972, PMID:11741948 MGI:2183618, RGD:730275 NCBI chr 3:150,587,833...150,603,057
Ensembl chr 3:150,587,833...150,603,082
JBrowse link
S-adenosylhomocysteine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Comt catechol-O-methyltransferase TAS RGD PMID:12584150 RGD:1359089 NCBI chr11:86,715,981...86,735,630
Ensembl chr11:86,715,981...86,735,622
JBrowse link
G Gamt guanidinoacetate N-methyltransferase IDA RGD PMID:15533043 RGD:1359081 NCBI chr 7:12,314,848...12,317,998
Ensembl chr 7:12,314,848...12,317,998
JBrowse link
G Gnmt glycine N-methyltransferase involved_in IDA
IBA
IMP
PMID:21873635
PMID:10756111
RGD
GO_Central
CAFA
PMID:15347642, PMID:21873635, PMID:10756111 RGD:1359070, RGD:13792537, RGD:12793006 NCBI chr 9:16,565,274...16,568,626
Ensembl chr 9:16,565,225...16,568,627
JBrowse link
G Icmt isoprenylcysteine carboxyl methyltransferase IMP RGD PMID:9192075 RGD:2289655 NCBI chr 5:169,475,270...169,482,031
Ensembl chr 5:169,475,270...169,482,030
JBrowse link
G Pcmt1 protein-L-isoaspartate (D-aspartate) O-methyltransferase 1 IDA RGD PMID:8263531 RGD:729481 NCBI chr 1:1,734,863...1,767,759
Ensembl chr 1:1,736,276...1,767,618
JBrowse link
G Pemt phosphatidylethanolamine N-methyltransferase IDA RGD PMID:8344945 RGD:729486 NCBI chr10:46,339,821...46,404,640
Ensembl chr10:46,339,821...46,404,642
JBrowse link
G Pnmt phenylethanolamine-N-methyltransferase TAS RGD PMID:12438084 RGD:1359087 NCBI chr10:86,340,893...86,342,501
Ensembl chr10:86,340,940...86,342,858
JBrowse link
S-methylmethionine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhmt2 betaine-homocysteine S-methyltransferase 2 involved_in ISO
IEA
(PMID:18230605)
GO_REF:0000107
RGD
Ensembl
PMID:18230605 GO_REF:0000107 NCBI chr 2:23,272,320...23,289,266
Ensembl chr 2:23,272,328...23,289,266
JBrowse link
sarcosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sardh sarcosine dehydrogenase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:5,737,203...5,802,153
Ensembl chr 3:5,737,200...5,802,129
JBrowse link
sarcosine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnmt glycine N-methyltransferase involved_in IMP
IBA
PMID:21873635 RGD
GO_Central
PMID:18501206, PMID:21873635 RGD:7242952, RGD:13792537 NCBI chr 9:16,565,274...16,568,626
Ensembl chr 9:16,565,225...16,568,627
JBrowse link
tetrahydrofolate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1l1 aldehyde dehydrogenase 1 family, member L1 TAS RGD PMID:14729668 RGD:1547843 NCBI chr 4:123,516,553...123,564,067
Ensembl chr 4:123,516,788...123,557,501
JBrowse link
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase IDA RGD PMID:7057182 RGD:2301991 NCBI chr 9:78,862,013...78,882,061
Ensembl chr 9:78,862,013...78,882,060
JBrowse link
G Dhfr dihydrofolate reductase involved_in IDA
IEA
IBA
ISO
GO_REF:0000041
PMID:21873635
(PMID:2303423)
UniProt
RGD
PMID:2303423, PMID:11502523, PMID:21873635 GO_REF:0000041, RGD:1298877, RGD:13792537 NCBI chr 2:21,931,887...21,958,927
Ensembl chr 2:21,931,493...21,962,453
JBrowse link
G Gart phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase IDA RGD PMID:4078017 RGD:2301990 NCBI chr11:31,780,477...31,805,728
Ensembl chr11:31,780,487...31,805,728
JBrowse link
G Gch1 GTP cyclohydrolase 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:23,935,011...23,968,971
Ensembl chr15:23,934,585...23,969,011
JBrowse link
tetrahydrofolate interconversion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dmgdh dimethylglycine dehydrogenase IDA RGD PMID:6163778 RGD:7245485 NCBI chr 2:23,289,376...23,370,360
Ensembl chr 2:23,289,374...23,370,477
JBrowse link
G Ftcd formimidoyltransferase cyclodeaminase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr20:12,806,957...12,820,466
Ensembl chr20:12,806,957...12,820,466
JBrowse link
G LOC680432 similar to methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase involved_in IBA
IEA
PMID:21873635
GO_REF:0000041
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr 3:121,490,787...121,493,932
Ensembl chr 3:121,490,812...121,493,714
JBrowse link
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in IEA
ISO
IBA
GO_REF:0000041
(MGI:5503248|PMID:23704330)
PMID:21873635
(PMID:1881876)
UniProt
RGD
PMID:1881876 PMID:23704330, PMID:21873635 GO_REF:0000041 MGI:5503248, RGD:13792537 NCBI chr 6:99,282,850...99,350,367
Ensembl chr 6:99,282,850...99,350,340
JBrowse link
G Mthfd1l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like involved_in IBA
IEA
PMID:21873635
GO_REF:0000041
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr 1:40,529,092...40,719,232
Ensembl chr 1:40,529,045...40,719,391
JBrowse link
G Mthfd2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:115,004,433...115,015,965
Ensembl chr 4:115,004,448...115,015,965
JBrowse link
G Mthfd2l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like involved_in IDA
IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt PMID:21163947, PMID:21873635 GO_REF:0000041, RGD:7244288, RGD:13792537 NCBI chr14:18,640,274...18,721,298
Ensembl chr14:18,640,277...18,720,357
JBrowse link
G Mthfr methylenetetrahydrofolate reductase involved_in ISO
IBA
IEA
UniProtKB:P53128 (PMID:10551815), (PMID:12673793), (PMID:25736335)
PMID:21873635
GO_REF:0000041
RGD
UniProt
PMID:10551815 PMID:12673793 PMID:25736335, PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr 5:164,844,642...164,864,360
Ensembl chr 5:164,845,925...164,860,910
JBrowse link
G Mthfs methenyltetrahydrofolate synthetase involved_in ISO
IBA
(PMID:12764149)
PMID:21873635
RGD PMID:12764149, PMID:21873635 RGD:13792537 NCBI chr 8:96,564,877...96,614,386
Ensembl chr 8:96,564,877...96,614,348
JBrowse link
G Sardh sarcosine dehydrogenase IDA RGD PMID:6163778 RGD:7245485 NCBI chr 3:5,737,203...5,802,153
Ensembl chr 3:5,737,200...5,802,129
JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 involved_in IBA
ISO
IEA
PMID:21873635
(PMID:24698160)
GO_REF:0000041
RGD
UniProt
PMID:24698160, PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr10:47,030,813...47,059,216
Ensembl chr10:47,031,050...47,059,216
JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 involved_in IBA
IEA
PMID:21873635
GO_REF:0000041
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr 7:70,824,718...70,829,822
Ensembl chr 7:70,824,715...70,829,815
JBrowse link
G Tyms thymidylate synthetase involved_in ISO (PMID:15093541) RGD PMID:15093541 NCBI chr 9:121,918,875...121,931,564
Ensembl chr 9:121,918,947...121,931,564
JBrowse link
tetrahydrofolate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhfr dihydrofolate reductase involved_in ISO
ISS
(PMID:12096917), (PMID:21876184)
GO_REF:0000024
RGD
UniProt
PMID:12096917 PMID:21876184 GO_REF:0000024 NCBI chr 2:21,931,887...21,958,927
Ensembl chr 2:21,931,493...21,962,453
JBrowse link
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 TAS RGD PMID:2186031 RGD:1299513 NCBI chr 6:99,282,850...99,350,367
Ensembl chr 6:99,282,850...99,350,340
JBrowse link
G Mthfd2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase involved_in ISO (PMID:8218174) RGD PMID:8218174 NCBI chr 4:115,004,433...115,015,965
Ensembl chr 4:115,004,448...115,015,965
JBrowse link
G Mthfr methylenetetrahydrofolate reductase IDA RGD PMID:11730351 RGD:1601423 NCBI chr 5:164,844,642...164,864,360
Ensembl chr 5:164,845,925...164,860,910
JBrowse link
G Mthfs methenyltetrahydrofolate synthetase involved_in ISO (PMID:19738041), (PMID:7766710) RGD PMID:7766710 PMID:19738041 NCBI chr 8:96,564,877...96,614,386
Ensembl chr 8:96,564,877...96,614,348
JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase IDA
IMP
RGD PMID:11730351, PMID:21121936 RGD:1601423, RGD:7207080 NCBI chr17:66,210,444...66,295,014
Ensembl chr17:66,210,461...66,295,014
JBrowse link
G Pipox pipecolic acid and sarcosine oxidase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:64,951,986...64,964,865
Ensembl chr10:64,952,119...64,964,862
JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 involved_in IBA
ISO
PMID:21873635
(PMID:24698160)
RGD PMID:24698160, PMID:21873635 RGD:13792537 NCBI chr10:47,030,813...47,059,216
Ensembl chr10:47,031,050...47,059,216
JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 involved_in IBA
ISO
PMID:21873635
(PMID:24075985), (PMID:25619277)
RGD PMID:24075985 PMID:25619277, PMID:21873635 RGD:13792537 NCBI chr 7:70,824,718...70,829,822
Ensembl chr 7:70,824,715...70,829,815
JBrowse link
G Tyms thymidylate synthetase IEP 5-formyltetrahydrofolate RGD PMID:7503782 RGD:5133451 NCBI chr 9:121,918,875...121,931,564
Ensembl chr 9:121,918,947...121,931,564
JBrowse link
tetrahydrofolylpolyglutamate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fpgs folylpolyglutamate synthase involved_in IBA
ISO
IEA
PMID:21873635
(PMID:25164808)
(PMID:3619447)
GO_REF:0000041
RGD
UniProt
PMID:3619447 PMID:25164808, PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr 3:11,717,667...11,729,694
Ensembl chr 3:11,717,667...11,723,327
JBrowse link
tetrahydrofolylpolyglutamate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ggh gamma-glutamyl hydrolase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:34,040,258...34,063,369
Ensembl chr 5:34,040,258...34,063,361
JBrowse link
thyroid hormone catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dio2 iodothyronine deiodinase 2 acts_upstream_of_or_within ISO MGI:2182450 (MGI:2154044|PMID:11731615) RGD PMID:11731615 MGI:2154044 NCBI chr 6:114,475,156...114,489,443
Ensembl chr 6:114,476,142...114,476,723
JBrowse link
G Dio3 iodothyronine deiodinase 3 involved_in
acts_upstream_of_or_within
ISO (MGI:4441081|PMID:20203194)
MGI:2664293 (MGI:3615073|PMID:16410833), (MGI:4441081|PMID:20203194), (MGI:5578402|PMID:25002520)
RGD PMID:16410833 PMID:20203194 PMID:25002520 MGI:3615073 MGI:4441081 MGI:5578402 NCBI chr 6:134,627,278...134,629,139
Ensembl chr 6:134,627,278...134,629,138
JBrowse link
thyroid hormone generation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cga glycoprotein hormones, alpha polypeptide involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:1857152 (MGI:1316794|PMID:12114718)
RGD PMID:12114718, PMID:21873635 MGI:1316794, RGD:13792537 NCBI chr 5:50,362,491...50,393,368
Ensembl chr 5:50,381,244...50,393,367
JBrowse link
G Cpq carboxypeptidase Q involved_in IDA
IBA
PMID:22127294
PMID:21873635
UniProt
GO_Central
PMID:22127294, PMID:21873635 RGD:8554022, RGD:13792537 NCBI chr 7:71,709,174...72,167,413
Ensembl chr 7:71,709,157...72,167,417
JBrowse link
G Ctsb cathepsin B involved_in IEA
ISO
GO_REF:0000107
(MGI:2664014|PMID:12782676)
Ensembl
RGD
PMID:12782676 GO_REF:0000107 MGI:2664014 NCBI chr15:46,316,741...46,337,613
Ensembl chr15:46,316,741...46,337,612
JBrowse link
G Ctsk cathepsin K involved_in ISO
ISS
(PMID:11082042)
(MGI:2664014|PMID:12782676)
GO_REF:0000024
RGD
UniProt
PMID:11082042 PMID:12782676 GO_REF:0000024 MGI:2664014 NCBI chr 2:196,655,469...196,666,447
Ensembl chr 2:196,655,469...196,666,446
JBrowse link
G Ctsl cathepsin L involved_in ISO (MGI:2664014|PMID:12782676) RGD PMID:12782676 MGI:2664014 NCBI chr17:1,873,105...1,879,266
Ensembl chr17:1,872,848...1,879,279
JBrowse link
G Dio2 iodothyronine deiodinase 2 IDA RGD PMID:15550511 RGD:1626436 NCBI chr 6:114,475,156...114,489,443
Ensembl chr 6:114,476,142...114,476,723
JBrowse link
G Duox1 dual oxidase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 3:114,251,794...114,286,827
Ensembl chr 3:114,253,637...114,286,802
JBrowse link
G Duox2 dual oxidase 2 involved_in TAS
IEA
GO_REF:0000041 UniProt PMID:12538618 GO_REF:0000041, RGD:632568 NCBI chr 3:114,218,187...114,237,808
Ensembl chr 3:114,218,193...114,235,933
JBrowse link
G Foxe1 forkhead box E1 acts_upstream_of_or_within ISO MGI:2181780 (MGI:1276273|PMID:9697704) RGD PMID:9697704 MGI:1276273 NCBI chr 5:61,954,549...61,957,357
Ensembl chr 5:61,954,549...61,957,357
JBrowse link
G Med1 mediator complex subunit 1 acts_upstream_of_or_within ISO MGI:1861125 (MGI:1355642|PMID:10882104) RGD PMID:10882104 MGI:1355642 NCBI chr10:86,101,560...86,145,271
Ensembl chr10:86,103,600...86,144,880
JBrowse link
G Slc16a10 solute carrier family 16 member 10 involved_in
acts_upstream_of_or_within_negative_effect
IEA
ISO
GO_REF:0000107
MGI:1203732 (MGI:5604693|PMID:24248460)
Ensembl
RGD
PMID:24248460 GO_REF:0000107 MGI:5604693 NCBI chr20:45,138,433...45,260,155
Ensembl chr20:45,143,453...45,260,119
JBrowse link
G Slc16a2 solute carrier family 16 member 2 involved_in
acts_upstream_of_or_within_negative_effect
IEA
ISO
GO_REF:0000107
MGI:1919722|MGI:3710233 (MGI:5604693|PMID:24248460)
Ensembl
RGD
PMID:24248460 GO_REF:0000107 MGI:5604693 NCBI chr  X:74,578,600...74,706,068
Ensembl chr  X:74,577,131...74,706,214
JBrowse link
G Slc5a5 solute carrier family 5 member 5 involved_in TAS
IEA
GO_REF:0000002 InterPro PMID:8559252 GO_REF:0000002, RGD:68854 NCBI chr16:20,297,414...20,307,401
Ensembl chr16:20,297,414...20,307,400
JBrowse link
G Tg thyroglobulin involved_in TAS
ISO
IEA
IBA
IDA
(MGI:2664014|PMID:12782676)
GO_REF:0000107
(PMID:11082042), (PMID:12387814)
(PMID:32025030)
PMID:21873635
RGD
Ensembl
PMID:11082042 PMID:12387814 PMID:12782676 PMID:32025030, PMID:11884402, PMID:21873635, PMID:3953233 GO_REF:0000107 MGI:2664014, RGD:728752, RGD:13792537, RGD:1600150 NCBI chr 7:107,467,260...107,652,897
Ensembl chr 7:107,467,260...107,652,899
JBrowse link
G Tpo thyroid peroxidase involved_in TAS
ISO
IEA
(PMID:12387814)
GO_REF:0000041
RGD
UniProt
PMID:12387814, PMID:15917231 GO_REF:0000041, RGD:1599649 NCBI chr 6:49,020,918...49,089,855
Ensembl chr 6:49,021,044...49,089,855
JBrowse link
thyroid hormone metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC118957.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:114,478,293...114,488,880 JBrowse link
G Crym crystallin, mu involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
MGI:3703787 (MGI:3703173|PMID:17264173)
PMID:21873635
Ensembl
RGD
PMID:17264173, PMID:21873635 GO_REF:0000107 MGI:3703173, RGD:13792537 NCBI chr 1:189,944,895...189,960,069
Ensembl chr 1:189,944,895...189,960,073
JBrowse link
G Dio1 iodothyronine deiodinase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:126,894,837...126,911,532
Ensembl chr 5:126,895,286...126,911,520
JBrowse link
G Dio2 iodothyronine deiodinase 2 involved_in TAS
IBA
ISO
IDA
PMID:21873635
(PMID:19651899)
RGD PMID:19651899, PMID:11934678, PMID:21873635, PMID:15550511 RGD:628323, RGD:13792537, RGD:1626436 NCBI chr 6:114,475,156...114,489,443
Ensembl chr 6:114,476,142...114,476,723
JBrowse link
G Dio3 iodothyronine deiodinase 3 involved_in TAS
IBA
ISO
PMID:21873635
UniProtKB:P36021 (PMID:26305885)
RGD PMID:26305885, PMID:7622463, PMID:21873635 RGD:68236, RGD:13792537 NCBI chr 6:134,627,278...134,629,139
Ensembl chr 6:134,627,278...134,629,138
JBrowse link
G Duox2 dual oxidase 2 acts_upstream_of_or_within ISO MGI:3712359 (MGI:3712355|PMID:17440044) RGD PMID:17440044 MGI:3712355 NCBI chr 3:114,218,187...114,237,808
Ensembl chr 3:114,218,193...114,235,933
JBrowse link
G Gcnt4 glucosaminyl (N-acetyl) transferase 4 acts_upstream_of_or_within ISO MGI:3849682 (MGI:3849361|PMID:19349303) RGD PMID:19349303 MGI:3849361 Ensembl chr 2:27,713,880...27,780,119 JBrowse link
G Iyd iodotyrosine deiodinase involved_in ISS
ISO
IBA
GO_REF:0000024
(PMID:25395621)
PMID:21873635
UniProt
RGD
PMID:25395621, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:40,086,513...40,100,966
Ensembl chr 1:40,086,470...40,101,840
JBrowse link
G Kcnj6 potassium inwardly-rectifying channel, subfamily J, member 6 acts_upstream_of_or_within ISO MGI:1856525 RGD MGI:85368 NCBI chr11:35,011,007...35,262,362
Ensembl chr11:35,024,196...35,099,383
JBrowse link
G Reln reelin acts_upstream_of_or_within ISO MGI:1856398 RGD MGI:85368 NCBI chr 4:9,347,533...9,774,257
Ensembl chr 4:9,347,528...9,773,670
JBrowse link
G Slc16a2 solute carrier family 16 member 2 acts_upstream_of ISO UniProtKB:P55073 (PMID:26305885) RGD PMID:26305885 NCBI chr  X:74,578,600...74,706,068
Ensembl chr  X:74,577,131...74,706,214
JBrowse link
G Slco4a1 solute carrier organic anion transporter family, member 4a1 IDA RGD PMID:11316767 RGD:727314 NCBI chr 3:175,838,994...175,857,985
Ensembl chr 3:175,838,994...175,857,983
JBrowse link
G Sult1a1 sulfotransferase family 1A member 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:198,100,586...198,104,106
Ensembl chr 1:198,100,586...198,104,109
JBrowse link
G Sult1b1 sulfotransferase family 1B member 1 involved_in ISO (PMID:9443824) RGD PMID:9443824 NCBI chr14:22,142,412...22,155,246
Ensembl chr14:22,142,364...22,155,231
JBrowse link
G Sult2a1 sulfotransferase family 2A member 1 involved_in ISO (PMID:10199779) RGD PMID:10199779 NCBI chr 1:76,558,721...76,614,315
Ensembl chr 1:76,252,329...76,780,230
JBrowse link
G Tg thyroglobulin acts_upstream_of_or_within ISO MGI:1856829 (MGI:57033|PMID:3803305) RGD PMID:3803305 MGI:57033 NCBI chr 7:107,467,260...107,652,897
Ensembl chr 7:107,467,260...107,652,899
JBrowse link
G Ttr transthyretin TAS RGD PMID:11995998 RGD:737655 NCBI chr18:15,532,963...15,542,180
Ensembl chr18:15,532,963...15,540,177
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19638
    metabolic process 11894
      cellular metabolic process 10847
        cellular modified amino acid metabolic process 200
          (3-aminopropyl)(L-aspartyl-1-amino)phosphoryl-5'-adenosine biosynthetic process from asparagine 0
          4-hydroxyproline metabolic process + 1
          L-dopa metabolic process + 1
          L-methionine biosynthetic process from O-phospho-L-homoserine and cystathionine 0
          N(omega),N(omega)-dimethyl-L-arginine metabolic process + 0
          N(omega)-methyl-L-arginine metabolic process + 0
          O3-(N-acetylglucosamine-1-phosphoryl)-L-serine biosynthetic process 0
          S-adenosylhomocysteine metabolic process + 8
          S-methylmethionine metabolic process + 1
          aerobactin metabolic process + 0
          amino-acid betaine metabolic process + 19
          argininosuccinate metabolic process 2
          cellular modified histidine metabolic process + 0
          coenzyme B metabolic process + 0
          creatine metabolic process + 2
          cyanophycin metabolic process 0
          folic acid-containing compound metabolic process + 28
          fructoseglycine metabolic process 0
          glutathione metabolic process + 78
          glyphosate metabolic process 0
          hydroxylysine metabolic process + 2
          hypusine metabolic process 0
          lincomycin metabolic process + 0
          nopaline metabolic process + 0
          ochratoxin A metabolic process + 0
          octopine metabolic process + 0
          pantothenate metabolic process + 2
          peptidyl-1-thioglycine biosynthetic process from peptidyl-glycine + 0
          peptidyl-glycine cholesteryl ester biosynthesis from peptidyl-glycine 0
          phosphagen metabolic process + 4
          phosphatidylserine metabolic process + 22
          pyrrolysine metabolic process + 0
          sarcosine metabolic process + 2
          thyroid hormone metabolic process + 34
Path 2
Term Annotations click to browse term
  biological_process 19638
    metabolic process 11894
      nitrogen compound metabolic process 10102
        organonitrogen compound metabolic process 6901
          cellular modified amino acid metabolic process 200
            (3-aminopropyl)(L-aspartyl-1-amino)phosphoryl-5'-adenosine biosynthetic process from asparagine 0
            4-hydroxyproline metabolic process + 1
            L-dopa metabolic process + 1
            L-methionine biosynthetic process from O-phospho-L-homoserine and cystathionine 0
            N(omega),N(omega)-dimethyl-L-arginine metabolic process + 0
            N(omega)-methyl-L-arginine metabolic process + 0
            O3-(N-acetylglucosamine-1-phosphoryl)-L-serine biosynthetic process 0
            S-adenosylhomocysteine metabolic process + 8
            S-methylmethionine metabolic process + 1
            aerobactin metabolic process + 0
            amino-acid betaine metabolic process + 19
            argininosuccinate metabolic process 2
            cellular modified histidine metabolic process + 0
            coenzyme B metabolic process + 0
            creatine metabolic process + 2
            cyanophycin metabolic process 0
            folic acid-containing compound metabolic process + 28
            fructoseglycine metabolic process 0
            glutathione metabolic process + 78
            glyphosate metabolic process 0
            hydroxylysine metabolic process + 2
            hypusine metabolic process 0
            lincomycin metabolic process + 0
            nopaline metabolic process + 0
            ochratoxin A metabolic process + 0
            octopine metabolic process + 0
            pantothenate metabolic process + 2
            peptidyl-1-thioglycine biosynthetic process from peptidyl-glycine + 0
            peptidyl-glycine cholesteryl ester biosynthesis from peptidyl-glycine 0
            phosphagen metabolic process + 4
            phosphatidylserine metabolic process + 22
            pyrrolysine metabolic process + 0
            sarcosine metabolic process + 2
            thyroid hormone metabolic process + 34
paths to the root