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ONTOLOGY REPORT - ANNOTATIONS

Term:modified amino acid metabolic process
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Accession:GO:0006575 term browser browse the term
Definition:The chemical reactions and pathways involving compounds derived from amino acids, organic acids containing one or more amino substituents.
Synonyms:exact_synonym: amino acid derivative metabolic process;   cellular amino acid derivative metabolic process;   cellular amino acid derivative metabolism;   cellular modified amino acid metabolic process;   cellular modified amino acid metabolism;   modified amino acid metabolism


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10-formyltetrahydrofolate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in ISO
IEA		 (PMID:1881876)
(PMID:23704330)
GO_REF:0000107		 RGD
Ensembl		 PMID:1881876 PMID:23704330 GO_REF:0000107 NCBI chr 6:94,977,862...95,045,375
Ensembl chr 6:94,977,862...95,045,372 		JBrowse link
G Mthfd1l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like involved_in ISO
IBA		 (PMID:12937168)
GO_REF:0000033		 RGD
GO_Central		 PMID:12937168 GO_REF:0000033 NCBI chr 1:40,443,926...40,632,911
Ensembl chr 1:40,444,008...40,632,905 		JBrowse link
10-formyltetrahydrofolate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aasdhppt aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase acts_upstream_of_positive_effect
involved_in		 ISO
IEA		 (PMID:19933275), (PMID:21238436)
GO_REF:0000107		 RGD
Ensembl		 PMID:19933275 PMID:21238436 GO_REF:0000107 NCBI chr 8:1,453,226...1,463,990
Ensembl chr 8:1,452,282...1,463,966 		JBrowse link
G Aldh1l1 aldehyde dehydrogenase 1 family, member L1 involved_in ISO
IEA
IMP
IDA		 (PMID:19933275)
(PMID:31624291)
GO_REF:0000117
PMID:10585460
PMID:1848231		 RGD
UniProt		 PMID:19933275 PMID:31624291 PMID:10585460 PMID:1848231 GO_REF:0000117, RGD:150521656, RGD:632027 NCBI chr 4:123,059,989...123,106,471
Ensembl chr 4:123,060,008...123,106,465 		JBrowse link
G Aldh1l2 aldehyde dehydrogenase 1 family, member L2 involved_in ISO (PMID:21238436)
(PMID:33168096)		 RGD PMID:21238436 PMID:33168096 NCBI chr 7:20,254,246...20,305,793
Ensembl chr 7:20,254,233...20,305,776 		JBrowse link
10-formyltetrahydrofolate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mthfd2l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like IDA RGD PMID:21163947 RGD:7244288 NCBI chr14:17,089,947...17,170,036
Ensembl chr14:17,089,952...17,170,112 		JBrowse link
4-hydroxyproline catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoga1 4-hydroxy-2-oxoglutarate aldolase 1 involved_in ISO (PMID:21998747) RGD PMID:21998747 NCBI chr 1:240,856,991...240,884,243
Ensembl chr 1:240,857,126...240,884,568 		JBrowse link
amino-acid betaine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhmt betaine-homocysteine S-methyltransferase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 2:24,859,871...24,879,449
Ensembl chr 2:24,859,873...24,879,742 		JBrowse link
G Dmgdh dimethylglycine dehydrogenase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 2:24,912,600...24,987,533
Ensembl chr 2:24,912,578...24,987,528 		JBrowse link
amino-acid betaine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhmt betaine-homocysteine S-methyltransferase involved_in IEA
ISO		 GO_REF:0000107
(PMID:18230605)		 Ensembl
RGD		 PMID:18230605 GO_REF:0000107 NCBI chr 2:24,859,871...24,879,449
Ensembl chr 2:24,859,873...24,879,742 		JBrowse link
G Bhmt2 betaine-homocysteine S-methyltransferase 2 NOT|involved_in ISO (PMID:18230605) RGD PMID:18230605 NCBI chr 2:24,895,525...24,912,475
Ensembl chr 2:24,895,533...24,912,475 		JBrowse link
argininosuccinate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asl argininosuccinate lyase IDA RGD PMID:8586639 PMID:4062872 RGD:1599287, RGD:2300098 NCBI chr12:26,659,664...26,677,136
Ensembl chr12:26,659,565...26,679,662 		JBrowse link
G Ass1 argininosuccinate synthase 1 involved_in IDA
IBA
ISO		 GO_REF:0000033
(PMID:7977368)		 GO_Central
RGD		 PMID:7977368 PMID:4062872 GO_REF:0000033, RGD:2300098 NCBI chr 3:14,747,355...14,796,909
Ensembl chr 3:14,747,368...14,796,903 		JBrowse link
carnitine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadm acyl-CoA dehydrogenase medium chain involved_in ISO
IEA		 (PMID:16972171)
GO_REF:0000107		 RGD
Ensembl		 PMID:16972171 GO_REF:0000107 NCBI chr 2:242,858,865...242,883,036
Ensembl chr 2:242,858,865...242,883,147 		JBrowse link
G Aldh9a1 aldehyde dehydrogenase 9 family, member A1 involved_in TAS
ISO
IEA		 (PMID:10702312)
GO_REF:0000107
GO_REF:0000041		 RGD
Ensembl
UniProt		 PMID:10702312 PMID:10702312 GO_REF:0000041 GO_REF:0000107, RGD:68317 NCBI chr13:79,505,738...79,522,539
Ensembl chr13:79,505,695...79,540,568 		JBrowse link
G Bbox1 gamma-butyrobetaine hydroxylase 1 involved_in TAS
IBA
ISO
ISS
IEA		 GO_REF:0000033
MGI:104740 (PMID:17692817), (PMID:18945875)
PMID:9753662
GO_REF:0000024
(PMID:20599753), (PMID:9753662)
GO_REF:0000041		 GO_Central
RGD
UniProt		 PMID:9753662 PMID:17692817 PMID:18945875 PMID:20599753 PMID:10526231 More... GO_REF:0000024 GO_REF:0000033 GO_REF:0000041, RGD:632240, RGD:8554503 NCBI chr 3:96,822,654...96,871,786
Ensembl chr 3:96,822,655...96,871,458 		JBrowse link
G Tmlhe trimethyllysine hydroxylase, epsilon involved_in
acts_upstream_of_or_within		 TAS
IBA
ISO
ISS
IEA		 GO_REF:0000033
(PMID:12121276)
(PMID:37553674)
GO_REF:0000024
GO_REF:0000041
(PMID:15754339)
(PMID:23092983)		 GO_Central
RGD
UniProt		 PMID:12121276 PMID:15754339 PMID:23092983 PMID:37553674 PMID:11431483 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041, RGD:70558 NCBI chr20:91,234...138,942
Ensembl chr20:91,272...140,386 		JBrowse link
carnitine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadl acyl-CoA dehydrogenase, long chain involved_in ISO (PMID:9861014) RGD PMID:9861014 NCBI chr 9:68,333,981...68,372,149
Ensembl chr 9:68,333,980...68,372,220 		JBrowse link
carnitine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadm acyl-CoA dehydrogenase medium chain acts_upstream_of_or_within ISO MGI:3692446 (PMID:16121256) RGD PMID:16121256 NCBI chr 2:242,858,865...242,883,036
Ensembl chr 2:242,858,865...242,883,147 		JBrowse link
G Aldh9a1 aldehyde dehydrogenase 9 family, member A1 acts_upstream_of_or_within ISO (PMID:10702312) RGD PMID:10702312 NCBI chr13:79,505,738...79,522,539
Ensembl chr13:79,505,695...79,540,568 		JBrowse link
G Cpt1a carnitine palmitoyltransferase 1A involved_in TAS
IBA
IDA
ISO		 GO_REF:0000033
PMID:24222496
PMID:21990363
(PMID:11350182)		 GO_Central
RGD		 PMID:11350182 PMID:12826662 PMID:24222496 PMID:21990363 GO_REF:0000033, RGD:1298786, RGD:401901213, RGD:8554544 NCBI chr 1:200,564,634...200,627,059
Ensembl chr 1:200,565,613...200,627,055 		JBrowse link
G Cpt1b carnitine palmitoyltransferase 1B involved_in IDA
IBA		 PMID:24222496
GO_REF:0000033		 GO_Central PMID:24222496 GO_REF:0000033, RGD:401901213 NCBI chr 7:120,491,354...120,500,833
Ensembl chr 7:120,491,354...120,500,404 		JBrowse link
G Cpt1c carnitine palmitoyltransferase 1c involved_in
NOT|involved_in		 IDA
IBA		 GO_REF:0000033
PMID:24222496		 GO_Central
RGD		 PMID:18192268 PMID:24222496 GO_REF:0000033, RGD:2317579, RGD:401901213 NCBI chr 1:95,442,814...95,457,347
Ensembl chr 1:95,442,817...95,457,342 		JBrowse link
G Cpt2 carnitine palmitoyltransferase 2 involved_in ISO
IEA
ISS		 (PMID:20538056)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:20538056 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:122,664,677...122,682,126
Ensembl chr 5:122,664,677...122,682,095 		JBrowse link
G Crot carnitine O-octanoyltransferase involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:15492013)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:15492013 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:25,068,270...25,133,111
Ensembl chr 4:25,080,587...25,133,109 		JBrowse link
G Por cytochrome p450 oxidoreductase IEP RGD PMID:16616465 RGD:4889829 NCBI chr12:20,951,058...20,999,198
Ensembl chr12:20,951,058...20,999,245 		JBrowse link
G Slc22a4 solute carrier family 22 member 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
UniProtKB:Q9H015 (PMID:10655497)		 Ensembl
RGD		 PMID:10655497 GO_REF:0000107 NCBI chr10:38,133,333...38,179,932
Ensembl chr10:38,133,322...38,179,720 		JBrowse link
G Slc22a5 solute carrier family 22 member 5 acts_upstream_of_or_within ISO MGI:1856926 (PMID:15240869), (PMID:17027329), (PMID:1996978), (PMID:7914432), (PMID:8325377) RGD PMID:1996978 PMID:7914432 PMID:8325377 PMID:15240869 PMID:17027329 NCBI chr10:38,008,303...38,035,474
Ensembl chr10:38,008,311...38,035,309 		JBrowse link
carnitine metabolic process, CoA-linked term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadl acyl-CoA dehydrogenase, long chain involved_in IBA
ISO		 GO_REF:0000033
(PMID:9861014)		 GO_Central
RGD		 PMID:9861014 GO_REF:0000033 NCBI chr 9:68,333,981...68,372,149
Ensembl chr 9:68,333,980...68,372,220 		JBrowse link
G Acadm acyl-CoA dehydrogenase medium chain involved_in ISO
IEA		 (PMID:16972171)
(PMID:18459129)
GO_REF:0000107		 RGD
Ensembl		 PMID:16972171 PMID:18459129 GO_REF:0000107 NCBI chr 2:242,858,865...242,883,036
Ensembl chr 2:242,858,865...242,883,147 		JBrowse link
G Crat carnitine O-acetyltransferase involved_in ISO
IBA
IEA
ISS		 (PMID:15099582), (PMID:23485643), (PMID:2351134)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024		 RGD
GO_Central
Ensembl
UniProt		 PMID:2351134 PMID:15099582 PMID:23485643 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:13,675,684...13,689,282
Ensembl chr 3:13,675,684...13,689,255 		JBrowse link
creatine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gamt guanidinoacetate N-methyltransferase acts_upstream_of_or_within
involved_in		 IDA
ISO
IBA
IEA
TAS		 MGI:3044282 (PMID:15028668)
GO_REF:0000033
(PMID:8651275)
GO_REF:0000041		 RGD
GO_Central
UniProt		 PMID:8651275 PMID:15028668 PMID:15533043 PMID:12079381 GO_REF:0000033 GO_REF:0000041, RGD:1359081, RGD:632754 NCBI chr 7:9,448,590...9,451,413
Ensembl chr 7:9,448,628...9,451,778 		JBrowse link
G Gatm glycine amidinotransferase acts_upstream_of_or_within
involved_in		 ISO
IBA
IEA		 (PMID:9218780)
GO_REF:0000033
GO_REF:0000041		 RGD
GO_Central
UniProt		 PMID:9218780 GO_REF:0000033 GO_REF:0000041 NCBI chr 3:109,658,919...109,675,508
Ensembl chr 3:109,658,951...109,684,129 		JBrowse link
creatine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fkrp fukutin related protein acts_upstream_of_or_within ISO (PMID:23817215) RGD PMID:23817215 NCBI chr 1:77,479,641...77,486,954
Ensembl chr 1:77,476,084...77,486,992 		JBrowse link
G Gatm glycine amidinotransferase involved_in ISO (PMID:26490222) RGD PMID:26490222 NCBI chr 3:109,658,919...109,675,508
Ensembl chr 3:109,658,951...109,684,129 		JBrowse link
dihydrofolate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase IDA RGD PMID:8948466 RGD:5144056 NCBI chr 9:73,164,846...73,184,897
Ensembl chr 9:73,164,846...73,184,889 		JBrowse link
G Dhfr dihydrofolate reductase involved_in IDA
IBA
ISO		 GO_REF:0000033
(PMID:2303423), (PMID:23707606)		 GO_Central
RGD		 PMID:2303423 PMID:23707606 PMID:11502523 PMID:3970530 GO_REF:0000033, RGD:1298877, RGD:2300196 NCBI chr 2:23,585,876...23,611,199
Ensembl chr 2:23,586,031...23,613,713 		JBrowse link
folic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mthfs methenyltetrahydrofolate synthetase involved_in ISO (PMID:12764149) RGD PMID:12764149 NCBI chr 8:89,729,498...89,801,998
Ensembl chr 8:89,729,508...89,799,089 		JBrowse link
G Pm20d2 peptidase M20 domain containing 2 NOT|involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:47,566,059...47,586,334
Ensembl chr 5:47,566,072...47,586,212 		JBrowse link
folic acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1l1 aldehyde dehydrogenase 1 family, member L1 involved_in IDA PMID:1848231 UniProt PMID:1848231 RGD:632027 NCBI chr 4:123,059,989...123,106,471
Ensembl chr 4:123,060,008...123,106,465 		JBrowse link
G Aldh1l2 aldehyde dehydrogenase 1 family, member L2 involved_in ISO (PMID:33168096) RGD PMID:33168096 NCBI chr 7:20,254,246...20,305,793
Ensembl chr 7:20,254,233...20,305,776 		JBrowse link
G Dhfr dihydrofolate reductase involved_in IDA
IBA		 PMID:20424322
GO_REF:0000033		 GO_Central PMID:20424322 GO_REF:0000033, RGD:10054082 NCBI chr 2:23,585,876...23,611,199
Ensembl chr 2:23,586,031...23,613,713 		JBrowse link
G Folr1 folate receptor alpha acts_upstream_of_or_within ISO MGI:2383986 (PMID:12854656) RGD PMID:12854656 NCBI chr 1:156,219,460...156,238,436
Ensembl chr 1:156,219,460...156,230,667 		JBrowse link
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase involved_in ISS
ISO		 GO_REF:0000024
(PMID:24074862)
(PMID:11466310)		 UniProt
RGD		 PMID:11466310 PMID:24074862 GO_REF:0000024 NCBI chr 1:34,866,991...34,899,425
Ensembl chr 1:34,867,089...34,899,425 		JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 involved_in ISO (PMID:11278996) RGD PMID:11278996 NCBI chr10:45,468,698...45,490,833
Ensembl chr10:45,468,700...45,497,820 		JBrowse link
folic acid-containing compound metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Folh1 folate hydrolase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:11210180)		 Ensembl
RGD		 PMID:11210180 GO_REF:0000107 NCBI chr 1:140,428,101...140,501,563
Ensembl chr 1:140,428,101...140,501,379 		JBrowse link
G Fpgs folylpolyglutamate synthase involved_in ISO (PMID:3619447) RGD PMID:3619447 NCBI chr 3:15,972,800...15,993,592
Ensembl chr 3:15,972,800...15,993,563 		JBrowse link
G Mthfd1l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like involved_in ISO (PMID:12937168) RGD PMID:12937168 NCBI chr 1:40,443,926...40,632,911
Ensembl chr 1:40,444,008...40,632,905 		JBrowse link
glutathione biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gclc glutamate-cysteine ligase, catalytic subunit acts_upstream_of_or_within
involved_in		 IMP
ISO
IBA
IEA
ISS		 MGI:2387010 (PMID:10805773), (PMID:16081425)
GO_REF:0000033
GO_REF:0000041
(PMID:10395918), (PMID:12663448), (PMID:8104187), (PMID:9675072)
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:8104187 PMID:9675072 PMID:10395918 PMID:10805773 PMID:12663448 More... GO_REF:0000024 GO_REF:0000033 GO_REF:0000041, RGD:1582661 NCBI chr 8:78,629,899...78,668,547
Ensembl chr 8:78,630,127...78,668,544 		JBrowse link
G Gclm glutamate cysteine ligase, modifier subunit acts_upstream_of_or_within
involved_in		 IMP
ISO
IBA
IEA
ISS		 (PMID:16081425)
GO_REF:0000033
GO_REF:0000041
(PMID:10395918), (PMID:12081989), (PMID:9675072)
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:9675072 PMID:10395918 PMID:12081989 PMID:16081425 PMID:16183645 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041, RGD:1582661 NCBI chr 2:210,347,482...210,367,537
Ensembl chr 2:210,347,482...210,367,535 		JBrowse link
G Ggt1 gamma-glutamyltransferase 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:12468440)		 Ensembl
RGD		 PMID:12468440 GO_REF:0000107 NCBI chr20:13,074,695...13,104,095
Ensembl chr20:13,074,700...13,108,442 		JBrowse link
G Ggt5 gamma-glutamyltransferase 5 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:13,043,255...13,071,523
Ensembl chr20:13,043,257...13,071,450 		JBrowse link
G Ggt6 gamma-glutamyl transferase 6 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:57,051,977...57,054,900
Ensembl chr10:57,051,825...57,067,260 		JBrowse link
G Ggt7 gamma-glutamyltransferase 7 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:143,978,073...144,004,597
Ensembl chr 3:143,978,082...144,001,492 		JBrowse link
G Gss glutathione synthetase involved_in IDA
IEA		 GO_REF:0000041 UniProt
RGD		 PMID:10964706 GO_REF:0000041, RGD:1599340 NCBI chr 3:144,047,849...144,078,197
Ensembl chr 3:144,047,850...144,078,198 		JBrowse link
G Hagh hydroxyacyl glutathione hydrolase involved_in IEA
ISO		 GO_REF:0000107
(PMID:8550579)		 Ensembl
RGD		 PMID:8550579 GO_REF:0000107 NCBI chr10:13,874,883...13,889,527
Ensembl chr10:13,875,241...13,889,504 		JBrowse link
G Mgst2 microsomal glutathione S-transferase 2 involved_in ISO (PMID:8703034) RGD PMID:8703034 NCBI chr 2:135,679,524...135,715,828
Ensembl chr 2:135,693,557...135,715,828 		JBrowse link
G Slc1a1 solute carrier family 1 member 1 involved_in ISO (PMID:12614333) RGD PMID:12614333 NCBI chr 1:226,549,932...226,631,925
Ensembl chr 1:226,549,842...226,630,402 		JBrowse link
G Slc1a2 solute carrier family 1 member 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:12614333)		 Ensembl
RGD		 PMID:12614333 GO_REF:0000107 NCBI chr 3:89,005,129...89,135,469
Ensembl chr 3:89,005,129...89,126,498 		JBrowse link
glutathione catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07044631.2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002
G Chac1 ChaC glutathione-specific gamma-glutamylcyclotransferase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:106,342,302...106,345,526
Ensembl chr 3:106,342,302...106,345,526 		JBrowse link
G Chac2 ChaC glutathione specific gamma-glutamylcyclotransferase 2 involved_in IEA
IBA		 GO_REF:0000104
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000104 NCBI chr14:104,720,754...104,728,305
Ensembl chr14:104,720,758...104,728,301 		JBrowse link
G Dpep1 dipeptidase 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:9560193)		 UniProt
RGD		 PMID:9560193 GO_REF:0000024 NCBI chr19:51,209,831...51,237,004
Ensembl chr19:51,219,660...51,235,257 		JBrowse link
G Ggt1 gamma-glutamyltransferase 1 involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000002
(PMID:17924658), (PMID:21447318)		 UniProt
GO_Central
InterPro
RGD		 PMID:17924658 PMID:21447318 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 NCBI chr20:13,074,695...13,104,095
Ensembl chr20:13,074,700...13,108,442 		JBrowse link
G Ggt5 gamma-glutamyltransferase 5 involved_in ISO
IEA
IBA
ISS		 (PMID:1676842), (PMID:21447318)
GO_REF:0000002
GO_REF:0000033
GO_REF:0000024		 RGD
InterPro
GO_Central
UniProt		 PMID:1676842 PMID:21447318 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 NCBI chr20:13,043,255...13,071,523
Ensembl chr20:13,043,257...13,071,450 		JBrowse link
G Ggt7 gamma-glutamyltransferase 7 involved_in IEA
IBA		 GO_REF:0000104
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000104 NCBI chr 3:143,978,073...144,004,597
Ensembl chr 3:143,978,082...144,001,492 		JBrowse link
glutathione metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aaas aladin WD repeat nucleoporin acts_upstream_of_or_within ISO (PMID:29362278) RGD PMID:29362278 NCBI chr 7:133,464,315...133,483,961
Ensembl chr 7:133,464,315...133,483,961 		JBrowse link
G AC097845.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 2:195,591,871...195,596,007 JBrowse link
G Arl6ip5 ARF like GTPase 6 interacting protein 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:5315599 (PMID:18799673), (PMID:22210510)		 Ensembl
RGD		 PMID:18799673 PMID:22210510 GO_REF:0000107 NCBI chr 4:129,810,650...129,838,628
Ensembl chr 4:129,810,645...129,838,608 		JBrowse link
G Cth cystathionine gamma-lyase IMP RGD PMID:15683713 RGD:1600763 NCBI chr 2:246,975,888...247,002,234
Ensembl chr 2:246,975,894...247,002,234 		JBrowse link
G Ctns cystinosin, lysosomal cystine transporter involved_in ISO (PMID:15956064) RGD PMID:15956064 NCBI chr10:57,801,551...57,817,213
Ensembl chr10:57,801,456...57,817,120 		JBrowse link
G ENSRNOG00000064002 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 2:5,268,578...5,270,273 JBrowse link
G Ethe1 ETHE1, persulfide dioxygenase involved_in ISO (PMID:23144459) RGD PMID:23144459 NCBI chr 1:80,184,037...80,199,092
Ensembl chr 1:80,183,894...80,199,052 		JBrowse link
G G6pd glucose-6-phosphate dehydrogenase involved_in
acts_upstream_of_or_within		 ISO (PMID:17516514), (PMID:2420826)
MGI:2183760 (PMID:12521604)		 RGD PMID:2420826 PMID:12521604 PMID:17516514 NCBI chr  X:152,201,081...152,220,863
Ensembl chr  X:152,201,098...152,220,801 		JBrowse link
G Gclc glutamate-cysteine ligase, catalytic subunit acts_upstream_of_or_within ISO MGI:2429419 (PMID:11118286) RGD PMID:11118286 NCBI chr 8:78,629,899...78,668,547
Ensembl chr 8:78,630,127...78,668,544 		JBrowse link
G Gclm glutamate cysteine ligase, modifier subunit acts_upstream_of_or_within ISO MGI:2447852 (PMID:12384496) RGD PMID:12384496 NCBI chr 2:210,347,482...210,367,537
Ensembl chr 2:210,347,482...210,367,535 		JBrowse link
G Glo1 glyoxalase 1 IDA RGD PMID:8719777 PMID:8903102 RGD:1641958, RGD:1641959 NCBI chr20:8,663,617...8,681,661
Ensembl chr20:8,662,801...8,681,649 		JBrowse link
G Gpx1 glutathione peroxidase 1 involved_in ISO
IBA
IEA		 (PMID:12829378)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:12829378 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:109,026,905...109,028,031
Ensembl chr 8:109,026,905...109,028,024 		JBrowse link
G Gsr glutathione-disulfide reductase involved_in IDA
IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro
RGD		 PMID:237922 GO_REF:0000002 GO_REF:0000033, RGD:1625133 NCBI chr16:58,482,209...58,525,256
Ensembl chr16:58,482,505...58,525,661 		JBrowse link
G Gsta1 glutathione S-transferase alpha 1 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:20606271)
GO_REF:0000033
(PMID:11851347)		 RGD
GO_Central		 PMID:11851347 PMID:20606271 GO_REF:0000033 NCBI chr 9:23,703,476...23,720,121
Ensembl chr 9:23,703,477...23,720,121 		JBrowse link
G Gsta2 glutathione S-transferase alpha 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:79,184,535...79,196,827
Ensembl chr 8:79,184,322...79,196,798 		JBrowse link
G Gsta3 glutathione S-transferase alpha 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:23,658,574...23,684,240
Ensembl chr 9:23,658,574...23,684,240 		JBrowse link
G Gsta3l1 glutathione S-transferase alpha 3 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:23,619,691...23,628,517
Ensembl chr 9:23,620,010...23,632,333 		JBrowse link
G Gsta4 glutathione S-transferase alpha 4 involved_in ISO
IBA		 (PMID:10329152)
GO_REF:0000033		 RGD
GO_Central		 PMID:10329152 GO_REF:0000033 NCBI chr 8:79,066,967...79,084,193
Ensembl chr 8:79,066,934...79,084,182 		JBrowse link
G Gsta5 glutathione S-transferase alpha 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:79,105,561...79,117,472
Ensembl chr 8:79,105,661...79,117,472 		JBrowse link
G Gsta6 glutathione S-transferase alpha 6 involved_in ISS
IBA		 GO_REF:0000024
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000024 GO_REF:0000033 NCBI chr 9:23,743,262...23,806,260
Ensembl chr 9:23,744,288...23,801,131 		JBrowse link
G Gstk1 glutathione S-transferase kappa 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:12720545)		 GO_Central
RGD		 PMID:12720545 GO_REF:0000033 NCBI chr 4:71,118,979...71,123,298
Ensembl chr 4:71,118,896...71,123,292 		JBrowse link
G Gstm1 glutathione S-transferase mu 1 involved_in IMP
IBA
ISO
IDA		 GO_REF:0000033
(PMID:8373352)
PMID:10229687		 GO_Central
RGD		 PMID:8373352 PMID:12027896 PMID:10229687 GO_REF:0000033, RGD:2302181, RGD:70307 NCBI chr 2:195,649,845...195,655,402
Ensembl chr 2:195,649,845...195,655,411 		JBrowse link
G Gstm2 glutathione S-transferase mu 2 involved_in IMP
IBA
ISO		 GO_REF:0000033
(PMID:16549767), (PMID:2034681), (PMID:8373352)		 GO_Central
RGD		 PMID:2034681 PMID:8373352 PMID:16549767 PMID:12027896 GO_REF:0000033, RGD:2302181 NCBI chr 2:195,624,015...195,628,774
Ensembl chr 2:195,544,426...195,628,961 		JBrowse link
G Gstm4 glutathione S-transferase mu 4 involved_in ISO
IBA
IEA		 (PMID:8373352)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:8373352 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:195,667,940...195,685,315
Ensembl chr 2:195,680,004...195,685,323 		JBrowse link
G Gstm5 glutathione S-transferase, mu 5 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:10587441), (PMID:8373352)		 UniProt
GO_Central
RGD		 PMID:8373352 PMID:10587441 GO_REF:0000024 GO_REF:0000033 NCBI chr 2:195,531,599...195,534,562
Ensembl chr 2:195,531,495...195,534,553 		JBrowse link
G Gstm5l glutathione S-transferase, mu 5-like involved_in ISO (PMID:10587441) RGD PMID:10587441 NCBI chr 2:195,544,424...195,549,895
Ensembl chr 2:195,544,426...195,628,961 		JBrowse link
G Gstm7 glutathione S-transferase, mu 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:195,566,701...195,572,149
Ensembl chr 2:195,566,701...195,572,203 		JBrowse link
G Gsto1 glutathione S-transferase omega 1 involved_in IEA
IBA		 GO_REF:0000104
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000104 NCBI chr 1:246,721,089...246,731,228
Ensembl chr 1:246,721,221...246,731,468 		JBrowse link
G Gsto2 glutathione S-transferase omega 2 involved_in IEA
IBA		 GO_REF:0000104
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000104 NCBI chr 1:246,731,314...246,757,592
Ensembl chr 1:246,732,089...246,753,866 		JBrowse link
G Gstp1 glutathione S-transferase pi 1 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:1540159)
GO_REF:0000033
(PMID:7982937)		 RGD
GO_Central		 PMID:1540159 PMID:7982937 GO_REF:0000033 NCBI chr 1:201,337,762...201,340,230
Ensembl chr 1:201,321,672...201,340,226 		JBrowse link
G Gstp3 glutathione S-transferase pi 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:201,355,682...201,358,216
Ensembl chr 1:201,355,682...201,358,330 		JBrowse link
G Gstt1 glutathione S-transferase theta 1 involved_in
acts_upstream_of_or_within		 IDA
ISO
IBA		 PMID:20097269
(PMID:20097269)
MGI:3828088 (PMID:12038961), (PMID:17827337), (PMID:8670055), (PMID:9854036)
GO_REF:0000033
(PMID:20097269), (PMID:9307035), (PMID:9434735)		 RGD
GO_Central		 PMID:8670055 PMID:9307035 PMID:9434735 PMID:9854036 PMID:12038961 More... GO_REF:0000033, RGD:8554299 NCBI chr20:12,856,613...12,873,586
Ensembl chr20:12,856,669...12,873,585 		JBrowse link
G Gstt2 glutathione S-transferase theta 2 acts_upstream_of_or_within
involved_in		 IDA
IBA		 PMID:12038961
GO_REF:0000033		 GO_Central PMID:12038961 GO_REF:0000033, RGD:8553858 NCBI chr20:12,819,617...12,823,288
Ensembl chr20:12,819,170...12,823,288 		JBrowse link
G Gstt3 glutathione S-transferase, theta 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:12,875,184...12,882,540
Ensembl chr20:12,874,854...12,882,599 		JBrowse link
G Gstt4 glutathione S-transferase, theta 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:12,835,178...12,842,306
Ensembl chr20:12,835,178...12,842,292 		JBrowse link
G Gstz1 glutathione S-transferase zeta 1 involved_in ISO
IBA		 (PMID:10739172)
GO_REF:0000033		 RGD
GO_Central		 PMID:10739172 GO_REF:0000033 NCBI chr 6:106,794,594...106,805,284
Ensembl chr 6:106,794,074...106,805,284 		JBrowse link
G Hagh hydroxyacyl glutathione hydrolase involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:8719777 PMID:8903102 GO_REF:0000033, RGD:1641958, RGD:1641959 NCBI chr10:13,874,883...13,889,527
Ensembl chr10:13,875,241...13,889,504 		JBrowse link
G Hbb hemoglobin subunit beta IDA RGD PMID:19963409 RGD:2325281 NCBI chr 1:158,250,421...158,251,832
Ensembl chr 1:158,120,200...158,252,012 		JBrowse link
G Hmgn5 high mobility group nucleosome binding domain 5 acts_upstream_of_or_within ISO MGI:5588022 (PMID:24392144) RGD PMID:24392144 NCBI chr  X:74,085,871...74,094,488
Ensembl chr  X:74,085,875...74,094,441
Ensembl chr 1:74,085,875...74,094,441 		JBrowse link
G Hpgds hematopoietic prostaglandin D synthase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:94,368,426...94,397,931
Ensembl chr 4:94,373,342...94,397,883 		JBrowse link
G Idh1 isocitrate dehydrogenase (NADP(+)) 1 acts_upstream_of_or_within ISO (PMID:12031902) RGD PMID:12031902 NCBI chr 9:66,534,146...66,563,703
Ensembl chr 9:66,534,146...66,563,708 		JBrowse link
G Mgst1 microsomal glutathione S-transferase 1 acts_upstream_of_or_within ISO (PMID:10767383) RGD PMID:10767383 NCBI chr 4:171,029,666...171,044,893
Ensembl chr 4:171,029,630...171,044,892 		JBrowse link
G Mmachc metabolism of cobalamin associated C involved_in ISO (PMID:19801555), (PMID:22642810) RGD PMID:19801555 PMID:22642810 NCBI chr 5:130,166,056...130,172,735
Ensembl chr 5:130,166,451...130,172,601 		JBrowse link
G Nat8 N-acetyltransferase 8 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 4:118,279,521...118,284,671
Ensembl chr 4:118,270,954...118,281,763 		JBrowse link
G Ndp norrin cystine knot growth factor NDP acts_upstream_of_or_within ISO MGI:4414794 (PMID:30988181) RGD PMID:30988181 NCBI chr  X:5,796,487...5,820,934
Ensembl chr  X:5,796,487...5,820,934 		JBrowse link
G Nfe2l1 NFE2 like bZIP transcription factor 1 acts_upstream_of_or_within ISO MGI:3828165 (PMID:25092871) RGD PMID:25092871 NCBI chr10:81,796,055...81,812,926
Ensembl chr10:81,800,366...81,832,318 		JBrowse link
G Nox1 NADPH oxidase 1 IMP RGD PMID:30653821 RGD:329970281 NCBI chr  X:97,279,058...97,332,291
Ensembl chr  X:97,279,056...97,302,236 		JBrowse link
G Oplah 5-oxoprolinase (ATP-hydrolysing) involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:108,011,472...108,051,751
Ensembl chr 7:108,011,475...108,035,297 		JBrowse link
G Slc1a1 solute carrier family 1 member 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:28886095)
MGI:2655190 (PMID:18799673), (PMID:22732503)		 RGD PMID:18799673 PMID:22732503 PMID:28886095 NCBI chr 1:226,549,932...226,631,925
Ensembl chr 1:226,549,842...226,630,402 		JBrowse link
G Slc7a11 solute carrier family 7 member 11 acts_upstream_of_or_within ISO MGI:3608695 (PMID:17200146), (PMID:23085521) RGD PMID:17200146 PMID:23085521 NCBI chr 2:134,382,002...134,517,622
Ensembl chr 2:133,963,107...134,517,536 		JBrowse link
G Sod1 superoxide dismutase 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:1857872 (PMID:16377630)		 UniProt
RGD		 PMID:16377630 GO_REF:0000024 NCBI chr11:29,456,673...29,462,249
Ensembl chr11:29,456,558...29,462,249 		JBrowse link
G Sod2 superoxide dismutase 2 acts_upstream_of_or_within ISO MGI:1857344 (PMID:10049502) RGD PMID:10049502 NCBI chr 1:47,638,318...47,645,163
Ensembl chr 1:47,636,528...47,645,189 		JBrowse link
G Txnrd3 thioredoxin reductase 3 acts_upstream_of_or_within ISO (PMID:11259642) RGD PMID:11259642 NCBI chr 4:122,072,548...122,112,493
Ensembl chr 4:122,072,548...122,112,491 		JBrowse link
glycine betaine biosynthetic process from choline term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh7a1 aldehyde dehydrogenase 7 family, member A1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr18:50,003,242...50,042,193
Ensembl chr18:50,009,934...50,042,193 		JBrowse link
G Chdh choline dehydrogenase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr16:5,194,269...5,225,541
Ensembl chr16:5,194,269...5,225,537 		JBrowse link
hydroxylysine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plod2 procollagen lysine, 2-oxoglutarate 5-dioxygenase 2 involved_in ISO
IEA		 (PMID:10934207)
GO_REF:0000107		 RGD
Ensembl		 PMID:10934207 GO_REF:0000107 NCBI chr 8:93,084,548...93,167,255
Ensembl chr 8:93,084,513...93,167,255 		JBrowse link
G Plod3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 involved_in IEA
ISO		 GO_REF:0000107
(PMID:16447251)		 Ensembl
RGD		 PMID:16447251 GO_REF:0000107 NCBI chr12:19,676,384...19,686,945
Ensembl chr12:19,676,386...19,686,960 		JBrowse link
modified amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ggact gamma-glutamylamine cyclotransferase involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000104
(PMID:20110353)		 UniProt
RGD		 PMID:20110353 GO_REF:0000024 GO_REF:0000104 NCBI chr15:99,969,246...99,998,343
Ensembl chr15:99,968,282...99,993,455 		JBrowse link
G Ggact-ps3 gamma-glutamylamine cyclotransferase, pseudogene 3 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 5:47,343,248...47,355,132
Ensembl chr 5:47,354,774...47,355,154
Ensembl chr 5:47,354,774...47,355,154 		JBrowse link
N(omega),N(omega)-dimethyl-L-arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt2 alanine-glyoxylate aminotransferase 2 involved_in IDA PMID:2123486 UniProt PMID:2123486 RGD:401901222 NCBI chr 2:59,336,252...59,377,664
Ensembl chr 2:59,336,283...59,377,926 		JBrowse link
pantothenate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vnn1 vanin 1 involved_in ISO
IBA		 (PMID:11491533), (PMID:25478849)
GO_REF:0000033		 RGD
GO_Central		 PMID:11491533 PMID:25478849 GO_REF:0000033 NCBI chr 1:21,537,084...21,547,395
Ensembl chr 1:21,537,094...21,547,395 		JBrowse link
G Vnn3 vanin 3 involved_in IBA
ISO		 GO_REF:0000033
(PMID:11491533)		 GO_Central
RGD		 PMID:11491533 GO_REF:0000033 NCBI chr 1:21,571,364...21,583,626
Ensembl chr 1:21,571,364...21,583,626 		JBrowse link
peptidyl-proline hydroxylation to 3-hydroxy-L-proline term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crtap cartilage associated protein acts_upstream_of_or_within ISO MGI:3693334 (PMID:17055431) RGD PMID:17055431 NCBI chr 8:114,047,929...114,067,636
Ensembl chr 8:114,047,933...114,067,631 		JBrowse link
peptidyl-proline hydroxylation to 4-hydroxy-L-proline term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egln2 egl-9 family hypoxia-inducible factor 2 involved_in IDA
ISO		 PMID:15925519
(PMID:12039559)		 RGD PMID:12039559 PMID:15925519 RGD:13602003 NCBI chr 1:82,451,554...82,459,809
Ensembl chr 1:82,451,555...82,459,751 		JBrowse link
G Ero1a endoplasmic reticulum oxidoreductase 1 alpha acts_upstream_of_or_within ISO MGI:1859815|MGI:1914725 (PMID:22981861) RGD PMID:22981861 NCBI chr15:18,495,037...18,530,440
Ensembl chr15:18,492,945...18,530,478 		JBrowse link
G Ero1b endoplasmic reticulum oxidoreductase 1 beta acts_upstream_of_or_within ISO MGI:1354385|MGI:1859815 (PMID:22981861) RGD PMID:22981861 NCBI chr17:85,861,086...86,003,244
Ensembl chr17:85,929,618...86,003,398 		JBrowse link
G P4ha1 prolyl 4-hydroxylase subunit alpha 1 acts_upstream_of_or_within TAS
ISO		 (PMID:7753822) RGD PMID:7753822 PMID:11997102 RGD:625562 NCBI chr20:27,302,046...27,352,098
Ensembl chr20:27,302,141...27,352,786 		JBrowse link
G P4ha2 prolyl 4-hydroxylase subunit alpha 2 acts_upstream_of_or_within ISO (PMID:7753822) RGD PMID:7753822 NCBI chr10:38,243,136...38,271,983
Ensembl chr10:38,243,139...38,287,314 		JBrowse link
G P4hb prolyl 4-hydroxylase subunit beta acts_upstream_of_or_within ISO (PMID:7753822) RGD PMID:7753822 NCBI chr10:105,836,972...105,848,583
Ensembl chr10:105,836,982...105,848,500 		JBrowse link
G Prdx4 peroxiredoxin 4 acts_upstream_of_or_within ISO MGI:1354385|MGI:1914725 (PMID:22981861) RGD PMID:22981861 NCBI chr  X:40,026,762...40,044,066
Ensembl chr  X:40,026,651...40,044,066 		JBrowse link
phosphatidylserine acyl-chain remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lpcat3 lysophosphatidylcholine acyltransferase 3 involved_in ISO
ISS		 (PMID:18195019), (PMID:18772128), (PMID:18782225)
(PMID:18287005)
GO_REF:0000024		 RGD
UniProt		 PMID:18195019 PMID:18287005 PMID:18772128 PMID:18782225 GO_REF:0000024 NCBI chr 4:157,468,397...157,509,889
Ensembl chr 4:157,468,290...157,509,880 		JBrowse link
G Lpcat4 lysophosphatidylcholine acyltransferase 4 involved_in ISO (PMID:18458083) RGD PMID:18458083 NCBI chr 3:99,044,729...99,052,963
Ensembl chr 3:99,044,729...99,052,875 		JBrowse link
G Mboat1 membrane bound O-acyltransferase domain containing 1 involved_in ISO (PMID:18772128) RGD PMID:18772128 NCBI chr17:34,331,413...34,445,088
Ensembl chr17:34,331,422...34,445,088 		JBrowse link
G Mboat2 membrane bound O-acyltransferase domain containing 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:18772128)		 UniProt
RGD		 PMID:18772128 GO_REF:0000024 NCBI chr 6:41,471,135...41,597,599
Ensembl chr 6:41,471,161...41,593,485 		JBrowse link
G Pla2g2f phospholipase A2, group IIF involved_in ISO (PMID:11112443) RGD PMID:11112443 NCBI chr 5:150,986,788...150,993,175
Ensembl chr 5:150,986,788...150,993,175 		JBrowse link
phosphatidylserine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plscr1 phospholipid scramblase 1 involved_in ISO (PMID:12509439) RGD PMID:12509439 NCBI chr 8:92,784,279...92,804,698
Ensembl chr 8:92,784,356...92,804,692 		JBrowse link
G Ptdss1 phosphatidylserine synthase 1 involved_in ISO
IEA		 (PMID:19014349)
GO_REF:0000041		 RGD
UniProt		 PMID:19014349 GO_REF:0000041 NCBI chr 7:63,845,017...63,906,791
Ensembl chr 7:63,844,268...63,906,791 		JBrowse link
G Ptdss2 phosphatidylserine synthase 2 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:19014349)
MGI:2447151 (PMID:12361952)
GO_REF:0000041		 RGD
UniProt		 PMID:12361952 PMID:19014349 GO_REF:0000041 NCBI chr 1:196,241,439...196,267,632
Ensembl chr 1:196,241,494...196,267,685 		JBrowse link
phosphatidylserine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd12 abhydrolase domain containing 12, lysophospholipase involved_in
acts_upstream_of_or_within		 ISO
IBA
ISS		 (PMID:30643283)
MGI:5487621 (PMID:23297193)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:23297193 PMID:30643283 GO_REF:0000024 GO_REF:0000033 NCBI chr 3:139,659,315...139,719,529
Ensembl chr 3:139,659,317...139,719,564 		JBrowse link
G Abhd12b abhydrolase domain containing 12B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:88,668,627...88,696,435
Ensembl chr 6:88,668,642...88,696,458 		JBrowse link
G Abhd16a abhydrolase domain containing 16A, phospholipase involved_in IEA
ISO
IBA
ISS		 GO_REF:0000107
(PMID:25580854)
GO_REF:0000033
GO_REF:0000024		 Ensembl
RGD
GO_Central
UniProt		 PMID:25580854 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr20:3,719,089...3,733,952
Ensembl chr20:3,719,091...3,733,927 		JBrowse link
G Abhd16b abhydrolase domain containing 16B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:168,594,677...168,596,574
Ensembl chr 3:168,594,609...168,619,762 		JBrowse link
phosphatidylserine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lipc lipase C, hepatic type IDA RGD PMID:2223857 RGD:1600650 NCBI chr 8:71,509,633...71,635,663
Ensembl chr 8:71,509,635...71,635,464 		JBrowse link
G Pla2g10 phospholipase A2, group X involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:12359733)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:12359733 GO_REF:0000024 GO_REF:0000107 NCBI chr10:1,597,761...1,610,822
Ensembl chr10:1,597,761...1,609,000 		JBrowse link
G Pla2g15 phospholipase A2, group XV involved_in ISS
ISO		 GO_REF:0000024
(PMID:29724779)		 UniProt
RGD		 PMID:29724779 GO_REF:0000024 NCBI chr19:34,050,685...34,068,070
Ensembl chr19:34,050,694...34,068,063 		JBrowse link
G Pla2g3 phospholipase A2, group III involved_in ISO (PMID:28947740) RGD PMID:28947740 NCBI chr14:78,367,625...78,373,913
Ensembl chr14:78,368,105...78,373,913 		JBrowse link
G Serinc1 serine incorporator 1 involved_in IDA PMID:16120614 HGNC-UCL PMID:16120614 RGD:8553290 NCBI chr20:36,850,062...36,868,999
Ensembl chr20:36,850,076...36,896,691 		JBrowse link
G Serinc2 serine incorporator 2 involved_in IDA PMID:16120614 HGNC-UCL PMID:16120614 RGD:8553290 NCBI chr 5:142,592,308...142,614,628
Ensembl chr 5:142,592,309...142,618,364 		JBrowse link
G Serinc5 serine incorporator 5 involved_in IDA PMID:16120614 HGNC-UCL PMID:16120614 RGD:8553290 NCBI chr 2:23,846,899...23,950,346
Ensembl chr 2:23,846,900...23,950,346 		JBrowse link
phosphocreatine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ckb creatine kinase B involved_in ISO
IBA
IEA		 (PMID:8186255)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:8186255 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:130,729,420...130,732,301
Ensembl chr 6:130,729,423...130,732,315 		JBrowse link
G Ckm creatine kinase, M-type involved_in
acts_upstream_of_or_within		 TAS
IBA
ISO
IEA
IDA		 GO_REF:0000033
(PMID:15601660)
GO_REF:0000107		 GO_Central
RGD
Ensembl		 PMID:15601660 PMID:6209281 PMID:12069495 GO_REF:0000033 GO_REF:0000107, RGD:727227, RGD:1359082 NCBI chr 1:79,061,390...79,071,721
Ensembl chr 1:79,061,456...79,071,720 		JBrowse link
G Ckmt1 creatine kinase, mitochondrial 1 involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 3:108,329,859...108,335,760
Ensembl chr 3:108,330,705...108,335,758 		JBrowse link
G Ckmt2 creatine kinase, mitochondrial 2 involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 2:23,079,918...23,110,518
Ensembl chr 2:23,079,918...23,110,430 		JBrowse link
positive regulation of glutathione biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 involved_in ISO (PMID:14978030) RGD PMID:14978030 NCBI chr 4:102,805,495...102,866,914
Ensembl chr 4:102,805,510...102,866,911 		JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 involved_in ISO (PMID:14978030) RGD PMID:14978030 NCBI chr 3:60,594,239...60,621,712
Ensembl chr 3:60,594,242...60,621,737 		JBrowse link
positive regulation of L-dopa biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Park7 Parkinsonism associated deglycase acts_upstream_of ISS
ISO		 GO_REF:0000024
(PMID:16731528)		 ParkinsonsUK-UCL
RGD		 PMID:16731528 GO_REF:0000024 NCBI chr 5:161,353,718...161,376,993
Ensembl chr 5:161,353,719...161,376,970 		JBrowse link
positive regulation of thyroid hormone generation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctns cystinosin, lysosomal cystine transporter IMP RGD PMID:35695380 RGD:155630629 NCBI chr10:57,801,551...57,817,213
Ensembl chr10:57,801,456...57,817,120 		JBrowse link
G Gata3 GATA binding protein 3 involved_in ISO (PMID:19248180), (PMID:19723756) RGD PMID:19248180 PMID:19723756 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391 		JBrowse link
G Hpn hepsin involved_in ISS
ISO		 GO_REF:0000024
(PMID:17620368)		 UniProt
RGD		 PMID:17620368 GO_REF:0000024 NCBI chr 1:86,337,085...86,352,785
Ensembl chr 1:86,337,087...86,352,811 		JBrowse link
G Pax8 paired box 8 involved_in ISO
ISS		 (PMID:15356023)
(PMID:12586753)
GO_REF:0000024		 RGD
UniProt		 PMID:12586753 PMID:15356023 GO_REF:0000024 NCBI chr 3:7,185,721...7,242,363
Ensembl chr 3:7,185,723...7,242,363 		JBrowse link
G Slco1c1 solute carrier organic anion transporter family, member 1c1 involved_in ISO
IEA		 (PMID:18566113)
GO_REF:0000107		 RGD
Ensembl		 PMID:18566113 GO_REF:0000107 NCBI chr 4:174,466,621...174,513,290
Ensembl chr 4:174,466,631...174,513,289 		JBrowse link
prenylcysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pcyox1 prenylcysteine oxidase 1 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:11078725), (PMID:12186880)
MGI:2449567 (PMID:12151402)
GO_REF:0000104		 RGD
UniProt		 PMID:11078725 PMID:12151402 PMID:12186880 GO_REF:0000104 NCBI chr 4:118,832,114...118,842,951
Ensembl chr 4:118,830,638...118,842,951 		JBrowse link
G Pcyox1l prenylcysteine oxidase 1 like involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr18:55,150,637...55,161,334
Ensembl chr18:55,150,650...55,161,327 		JBrowse link
regulation of glutathione biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc7a11 solute carrier family 7 member 11 acts_upstream_of_or_within ISO MGI:1857061 (PMID:16037214) RGD PMID:16037214 NCBI chr 2:134,382,002...134,517,622
Ensembl chr 2:133,963,107...134,517,536 		JBrowse link
regulation of phosphatidylserine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mfsd2a MFSD2 lysolipid transporter A, lysophospholipid acts_upstream_of ISO (PMID:30074985) RGD PMID:30074985 NCBI chr 5:135,225,801...135,240,744
Ensembl chr 5:135,225,816...135,240,690 		JBrowse link
regulation of thyroid hormone generation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Duoxa1 dual oxidase maturation factor 1 acts_upstream_of_or_within ISO MGI:1914061 (PMID:22301785) RGD PMID:22301785 NCBI chr 3:109,249,815...109,260,511
Ensembl chr 3:109,249,923...109,260,499 		JBrowse link
G Duoxa2 dual oxidase maturation factor 2 acts_upstream_of_or_within ISO MGI:2384861 (PMID:22301785) RGD PMID:22301785 NCBI chr 3:109,245,337...109,249,055
Ensembl chr 3:109,245,476...109,248,968 		JBrowse link
S-adenosylhomocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahcy adenosylhomocysteinase acts_upstream_of_or_within IDA
ISO		 (PMID:12023972) RGD PMID:12023972 PMID:11741948 RGD:730275 NCBI chr 3:143,569,134...143,584,359
Ensembl chr 3:143,569,094...143,584,393 		JBrowse link
S-adenosylhomocysteine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Comt catechol-O-methyltransferase TAS RGD PMID:12584150 RGD:1359089 NCBI chr11:82,568,052...82,587,642
Ensembl chr11:82,568,025...82,587,642 		JBrowse link
G Gamt guanidinoacetate N-methyltransferase IDA RGD PMID:15533043 RGD:1359081 NCBI chr 7:9,448,590...9,451,413
Ensembl chr 7:9,448,628...9,451,778 		JBrowse link
G Gnmt glycine N-methyltransferase involved_in IDA
IBA
IMP		 GO_REF:0000033
PMID:10756111		 GO_Central
RGD		 PMID:15347642 PMID:10756111 GO_REF:0000033, RGD:1359070, RGD:12793006 NCBI chr 9:14,254,675...14,258,028
Ensembl chr 9:14,254,675...14,258,434 		JBrowse link
G Icmt isoprenylcysteine carboxyl methyltransferase IMP RGD PMID:9192075 RGD:2289655 NCBI chr 5:162,804,368...162,811,129
Ensembl chr 5:162,804,368...162,811,128 		JBrowse link
G Pcmt1 protein-L-isoaspartate (D-aspartate) O-methyltransferase 1 IDA RGD PMID:8263531 RGD:729481 NCBI chr 1:2,111,756...2,160,354
Ensembl chr 1:2,111,763...2,159,201 		JBrowse link
G Pemt phosphatidylethanolamine N-methyltransferase IDA RGD PMID:8344945 RGD:729486 NCBI chr10:44,775,910...44,849,990
Ensembl chr10:44,775,911...44,850,013 		JBrowse link
G Pnmt phenylethanolamine-N-methyltransferase TAS RGD PMID:12438084 RGD:1359087 NCBI chr10:83,383,019...83,386,557
Ensembl chr10:83,384,923...83,386,556 		JBrowse link
S-methylmethionine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhmt2 betaine-homocysteine S-methyltransferase 2 involved_in ISO
IEA		 (PMID:18230605)
GO_REF:0000107		 RGD
Ensembl		 PMID:18230605 GO_REF:0000107 NCBI chr 2:24,895,525...24,912,475
Ensembl chr 2:24,895,533...24,912,475 		JBrowse link
sarcosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sardh sarcosine dehydrogenase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:10,510,553...10,575,342
Ensembl chr 3:10,510,553...10,573,874 		JBrowse link
sarcosine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnmt glycine N-methyltransferase involved_in IMP
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:18501206 GO_REF:0000033, RGD:7242952 NCBI chr 9:14,254,675...14,258,028
Ensembl chr 9:14,254,675...14,258,434 		JBrowse link
tetrahydrofolate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1l1 aldehyde dehydrogenase 1 family, member L1 TAS RGD PMID:14729668 RGD:1547843 NCBI chr 4:123,059,989...123,106,471
Ensembl chr 4:123,060,008...123,106,465 		JBrowse link
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase IDA RGD PMID:7057182 RGD:2301991 NCBI chr 9:73,164,846...73,184,897
Ensembl chr 9:73,164,846...73,184,889 		JBrowse link
G Dhfr dihydrofolate reductase involved_in IDA
IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000041
(PMID:2303423)		 GO_Central
UniProt
RGD		 PMID:2303423 PMID:11502523 GO_REF:0000033 GO_REF:0000041, RGD:1298877 NCBI chr 2:23,585,876...23,611,199
Ensembl chr 2:23,586,031...23,613,713 		JBrowse link
G Gch1 GTP cyclohydrolase 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:20,404,267...20,437,727
Ensembl chr15:20,402,527...20,437,698 		JBrowse link
tetrahydrofolate interconversion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhfr dihydrofolate reductase involved_in ISO (PMID:360074) RGD PMID:360074 NCBI chr 2:23,585,876...23,611,199
Ensembl chr 2:23,586,031...23,613,713 		JBrowse link
G Dmgdh dimethylglycine dehydrogenase IDA RGD PMID:6163778 RGD:7245485 NCBI chr 2:24,912,600...24,987,533
Ensembl chr 2:24,912,578...24,987,528 		JBrowse link
G ENSRNOG00000065410 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 Ensembl chr 2:178,497,468...178,499,169 JBrowse link
G LOC134479019 bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in IEA
ISO
IBA
ISS		 GO_REF:0000041
(PMID:23704330)
GO_REF:0000033
GO_REF:0000024
(PMID:10828945), (PMID:1881876)		 UniProt
RGD
GO_Central		 PMID:1881876 PMID:10828945 PMID:23704330 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 NCBI chr 6:94,977,862...95,045,375
Ensembl chr 6:94,977,862...95,045,372 		JBrowse link
G Mthfd1-ps1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, pseudogene 1 involved_in IEA
ISS
IBA		 GO_REF:0000041
GO_REF:0000024
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 NCBI chr 3:116,195,791...116,198,973 JBrowse link
G Mthfd1l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:40,443,926...40,632,911
Ensembl chr 1:40,444,008...40,632,905 		JBrowse link
G Mthfd2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:115,811,135...115,822,663
Ensembl chr 4:115,811,139...115,822,608 		JBrowse link
G Mthfd2l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like involved_in IDA
IBA
IEA		 GO_REF:0000033
PMID:24733394
GO_REF:0000041		 GO_Central
UniProt
RGD		 PMID:21163947 PMID:24733394 GO_REF:0000033 GO_REF:0000041, RGD:7244288, RGD:150521648 NCBI chr14:17,089,947...17,170,036
Ensembl chr14:17,089,952...17,170,112 		JBrowse link
G Mthfr methylenetetrahydrofolate reductase involved_in IEA
IBA
ISO		 GO_REF:0000041
GO_REF:0000033
UniProtKB:P53128 (PMID:10551815), (PMID:12673793), (PMID:25736335), (PMID:29891918)		 UniProt
GO_Central
RGD		 PMID:10551815 PMID:12673793 PMID:25736335 PMID:29891918 GO_REF:0000033 GO_REF:0000041 NCBI chr 5:158,465,248...158,484,999
Ensembl chr 5:158,465,296...158,483,797 		JBrowse link
G Mthfs methenyltetrahydrofolate synthetase involved_in ISO (PMID:12764149) RGD PMID:12764149 NCBI chr 8:89,729,498...89,801,998
Ensembl chr 8:89,729,508...89,799,089 		JBrowse link
G Sardh sarcosine dehydrogenase IDA RGD PMID:6163778 RGD:7245485 NCBI chr 3:10,510,553...10,575,342
Ensembl chr 3:10,510,553...10,573,874 		JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 involved_in IEA
ISO		 GO_REF:0000041
MGI:1277989 (PMID:19513116)
(PMID:24698160)		 UniProt
RGD		 PMID:19513116 PMID:24698160 GO_REF:0000041 NCBI chr10:45,468,698...45,490,833
Ensembl chr10:45,468,700...45,497,820 		JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 involved_in IEA
ISO		 GO_REF:0000041
MGI:98299 (PMID:19513116)		 UniProt
RGD		 PMID:19513116 GO_REF:0000041 NCBI chr 7:63,358,961...63,364,293
Ensembl chr 7:63,358,961...63,364,236 		JBrowse link
G Tyms thymidylate synthetase involved_in ISO (PMID:15093541)
(PMID:22057276)		 RGD PMID:15093541 PMID:22057276 NCBI chr 9:113,313,454...113,329,551
Ensembl chr 9:113,313,452...113,329,536 		JBrowse link
tetrahydrofolate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhfr dihydrofolate reductase involved_in ISO
ISS		 (PMID:12096917), (PMID:21876184)
GO_REF:0000024		 RGD
UniProt		 PMID:12096917 PMID:21876184 GO_REF:0000024 NCBI chr 2:23,585,876...23,611,199
Ensembl chr 2:23,586,031...23,613,713 		JBrowse link
G ENSRNOG00000065410 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 2:178,497,468...178,499,169 JBrowse link
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 TAS RGD PMID:2186031 RGD:1299513 NCBI chr 6:94,977,862...95,045,375
Ensembl chr 6:94,977,862...95,045,372 		JBrowse link
G Mthfd2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase involved_in ISO (PMID:8218174) RGD PMID:8218174 NCBI chr 4:115,811,135...115,822,663
Ensembl chr 4:115,811,139...115,822,608 		JBrowse link
G Mthfr methylenetetrahydrofolate reductase IDA RGD PMID:11730351 RGD:1601423 NCBI chr 5:158,465,248...158,484,999
Ensembl chr 5:158,465,296...158,483,797 		JBrowse link
G Mthfs methenyltetrahydrofolate synthetase involved_in ISO (PMID:19738041), (PMID:7766710) RGD PMID:7766710 PMID:19738041 NCBI chr 8:89,729,498...89,801,998
Ensembl chr 8:89,729,508...89,799,089 		JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase involved_in IDA
IBA
IMP		 GO_REF:0000033 GO_Central
RGD		 PMID:11730351 PMID:21121936 GO_REF:0000033, RGD:1601423, RGD:7207080 NCBI chr17:58,219,998...58,308,560
Ensembl chr17:58,220,071...58,304,822 		JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 involved_in ISO
IBA		 (PMID:24698160)
GO_REF:0000033		 RGD
GO_Central		 PMID:24698160 GO_REF:0000033 NCBI chr10:45,468,698...45,490,833
Ensembl chr10:45,468,700...45,497,820 		JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 involved_in ISO
IBA		 (PMID:24075985), (PMID:25619277)
GO_REF:0000033		 RGD
GO_Central		 PMID:24075985 PMID:25619277 GO_REF:0000033 NCBI chr 7:63,358,961...63,364,293
Ensembl chr 7:63,358,961...63,364,236 		JBrowse link
G Tyms thymidylate synthetase IEP 5-formyltetrahydrofolate RGD PMID:7503782 RGD:5133451 NCBI chr 9:113,313,454...113,329,551
Ensembl chr 9:113,313,452...113,329,536 		JBrowse link
tetrahydrofolylpolyglutamate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fpgs folylpolyglutamate synthase involved_in IEA
IBA
ISO		 GO_REF:0000041
GO_REF:0000033
(PMID:3619447), (PMID:8408020)
(PMID:25164808)		 UniProt
GO_Central
RGD		 PMID:3619447 PMID:8408020 PMID:25164808 GO_REF:0000033 GO_REF:0000041 NCBI chr 3:15,972,800...15,993,592
Ensembl chr 3:15,972,800...15,993,563 		JBrowse link
tetrahydrofolylpolyglutamate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ggh gamma-glutamyl hydrolase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:33,529,880...33,552,790
Ensembl chr 5:33,529,880...33,552,787 		JBrowse link
thyroid hormone catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dio2 iodothyronine deiodinase 2 acts_upstream_of_or_within ISO MGI:2182450 (PMID:11731615) RGD PMID:11731615 NCBI chr 6:109,665,523...109,679,809
Ensembl chr 6:109,665,523...109,679,809 		JBrowse link
G Dio3 iodothyronine deiodinase 3 involved_in
acts_upstream_of_or_within		 ISO (PMID:20203194)
MGI:2664293 (PMID:16410833), (PMID:20203194), (PMID:25002520)		 RGD PMID:16410833 PMID:20203194 PMID:25002520 NCBI chr 6:129,285,747...129,287,608
Ensembl chr 6:129,285,749...129,286,660 		JBrowse link
thyroid hormone generation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cga glycoprotein hormones, alpha polypeptide involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:1857152 (PMID:12114718)		 GO_Central
RGD		 PMID:12114718 GO_REF:0000033 NCBI chr 5:49,486,915...49,499,192
Ensembl chr 5:49,487,068...49,499,191 		JBrowse link
G Cpq carboxypeptidase Q involved_in IDA
IBA		 PMID:22127294
GO_REF:0000033		 GO_Central PMID:22127294 GO_REF:0000033, RGD:8554022 NCBI chr 7:64,264,025...64,830,867
Ensembl chr 7:64,264,081...64,724,546 		JBrowse link
G Ctsb cathepsin B involved_in IEA
ISO		 GO_REF:0000107
(PMID:12782676)		 Ensembl
RGD		 PMID:12782676 GO_REF:0000107 NCBI chr15:37,389,636...37,410,508
Ensembl chr15:37,389,629...37,410,500 		JBrowse link
G Ctsk cathepsin K involved_in ISO
ISS		 (PMID:11082042)
(PMID:12782676)
GO_REF:0000024		 RGD
UniProt		 PMID:11082042 PMID:12782676 GO_REF:0000024 NCBI chr 2:183,058,586...183,069,551
Ensembl chr 2:183,058,569...183,069,550 		JBrowse link
G Ctsl cathepsin L involved_in ISO (PMID:12782676) RGD PMID:12782676 NCBI chr17:764,370...770,533
Ensembl chr17:764,309...770,548 		JBrowse link
G Dio2 iodothyronine deiodinase 2 IDA RGD PMID:15550511 RGD:1626436 NCBI chr 6:109,665,523...109,679,809
Ensembl chr 6:109,665,523...109,679,809 		JBrowse link
G Duox1 dual oxidase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 3:109,260,526...109,295,588
Ensembl chr 3:109,262,397...109,295,563 		JBrowse link
G Duox2 dual oxidase 2 involved_in TAS
IEA		 GO_REF:0000041 UniProt
RGD		 PMID:12538618 GO_REF:0000041, RGD:632568 NCBI chr 3:109,223,809...109,247,023
Ensembl chr 3:109,226,924...109,245,902 		JBrowse link
G Foxe1 forkhead box E1 acts_upstream_of_or_within ISO MGI:2181780 (PMID:9697704) RGD PMID:9697704 NCBI chr 5:60,630,027...60,632,835
Ensembl chr 5:60,630,027...60,632,835 		JBrowse link
G Med1 mediator complex subunit 1 acts_upstream_of_or_within ISO MGI:1861125 (PMID:10882104) RGD PMID:10882104 NCBI chr10:83,145,538...83,189,260
Ensembl chr10:83,145,568...83,189,299 		JBrowse link
G Slc16a10 solute carrier family 16 member 10 acts_upstream_of_or_within_negative_effect ISO MGI:1203732 (PMID:24248460) RGD PMID:24248460 NCBI chr20:43,454,819...43,567,839
Ensembl chr20:43,459,709...43,567,839 		JBrowse link
G Slc16a2 solute carrier family 16 member 2 acts_upstream_of_or_within_negative_effect ISO MGI:1919722|MGI:3710233 (PMID:24248460) RGD PMID:24248460 NCBI chr  X:68,725,365...68,848,572
Ensembl chr  X:68,723,261...68,848,771 		JBrowse link
G Slc26a7 solute carrier family 26 member 7 involved_in ISO (PMID:30333321) RGD PMID:30333321 NCBI chr 5:27,884,400...28,021,865
Ensembl chr 5:27,887,042...28,021,658 		JBrowse link
G Slc5a5 solute carrier family 5 member 5 involved_in TAS
IEA		 GO_REF:0000002 InterPro
RGD		 PMID:8559252 GO_REF:0000002, RGD:68854 NCBI chr16:18,546,709...18,556,698
Ensembl chr16:18,546,709...18,556,697 		JBrowse link
G Tg thyroglobulin involved_in TAS
ISO
IBA
IEA
IDA		 (PMID:12782676)
GO_REF:0000033
GO_REF:0000107
(PMID:11082042), (PMID:12387814)
(PMID:32025030)		 RGD
GO_Central
Ensembl		 PMID:11082042 PMID:12387814 PMID:12782676 PMID:32025030 PMID:11884402 More... GO_REF:0000033 GO_REF:0000107, RGD:728752, RGD:1600150 NCBI chr 7:98,418,293...98,603,210
Ensembl chr 7:98,418,293...98,603,210 		JBrowse link
G Tpo thyroid peroxidase involved_in TAS
ISO
IEA		 (PMID:12387814)
GO_REF:0000041		 RGD
UniProt		 PMID:12387814 PMID:15917231 GO_REF:0000041, RGD:1599649 NCBI chr 6:46,698,402...46,768,199
Ensembl chr 6:46,698,414...46,768,199 		JBrowse link
thyroid hormone metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crym crystallin, mu involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
MGI:3703787 (PMID:17264173)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:17264173 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:174,560,423...174,575,660
Ensembl chr 1:174,560,416...174,575,633 		JBrowse link
G Dio1 iodothyronine deiodinase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:122,074,285...122,090,983
Ensembl chr 5:122,074,279...122,090,970 		JBrowse link
G Dio2 iodothyronine deiodinase 2 involved_in TAS
IBA
ISO
IDA		 GO_REF:0000033
(PMID:19651899)		 GO_Central
RGD		 PMID:19651899 PMID:11934678 PMID:15550511 GO_REF:0000033, RGD:628323, RGD:1626436 NCBI chr 6:109,665,523...109,679,809
Ensembl chr 6:109,665,523...109,679,809 		JBrowse link
G Dio3 iodothyronine deiodinase 3 involved_in TAS
IBA
ISO		 GO_REF:0000033
UniProtKB:P36021 (PMID:26305885)		 GO_Central
RGD		 PMID:26305885 PMID:7622463 GO_REF:0000033, RGD:68236 NCBI chr 6:129,285,747...129,287,608
Ensembl chr 6:129,285,749...129,286,660 		JBrowse link
G Duox2 dual oxidase 2 acts_upstream_of_or_within ISO MGI:3712359 (PMID:17440044) RGD PMID:17440044 NCBI chr 3:109,223,809...109,247,023
Ensembl chr 3:109,226,924...109,245,902 		JBrowse link
G Gcnt4 glucosaminyl (N-acetyl) transferase 4 acts_upstream_of_or_within ISO MGI:3849682 (PMID:19349303) RGD PMID:19349303 NCBI chr 2:28,253,325...28,283,082
Ensembl chr 2:28,252,860...28,283,082 		JBrowse link
G Iyd iodotyrosine deiodinase involved_in ISO
IBA
ISS		 (PMID:25395621)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:25395621 GO_REF:0000024 GO_REF:0000033 NCBI chr 1:40,003,999...40,019,323
Ensembl chr 1:40,004,041...40,019,319 		JBrowse link
G Kcnj6 potassium inwardly-rectifying channel, subfamily J, member 6 acts_upstream_of_or_within ISO MGI:1856525 RGD MGI:85368 NCBI chr11:34,061,702...34,308,758
Ensembl chr11:34,061,708...34,308,758 		JBrowse link
G Reln reelin acts_upstream_of_or_within ISO MGI:1856398 RGD MGI:85368 NCBI chr 4:12,736,177...13,162,956
Ensembl chr 4:12,736,130...13,162,211 		JBrowse link
G Slc16a2 solute carrier family 16 member 2 acts_upstream_of ISO UniProtKB:P55073 (PMID:26305885) RGD PMID:26305885 NCBI chr  X:68,725,365...68,848,572
Ensembl chr  X:68,723,261...68,848,771 		JBrowse link
G Slco4a1 solute carrier organic anion transporter family, member 4a1 IDA RGD PMID:11316767 RGD:727314 NCBI chr 3:167,559,177...167,578,307
Ensembl chr 3:167,559,316...167,578,305 		JBrowse link
G Sult1a1 sulfotransferase family 1A member 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:181,272,022...181,276,750
Ensembl chr 1:181,272,023...181,275,562 		JBrowse link
G Sult1b1 sulfotransferase family 1B member 1 involved_in ISO
IDA		 (PMID:11368519)
(PMID:9644246)
PMID:8530477
(PMID:9443824), (PMID:9463486)		 RGD PMID:9443824 PMID:9463486 PMID:9644246 PMID:11368519 PMID:8530477 RGD:1299515 NCBI chr14:20,492,763...20,505,491
Ensembl chr14:20,492,708...20,505,483 		JBrowse link
G Sult2a1 sulfotransferase family 2A member 1 involved_in ISO (PMID:10199779) RGD PMID:10199779 NCBI chr 1:75,451,178...75,508,113
Ensembl chr 1:74,911,100...75,508,134 		JBrowse link
G Tg thyroglobulin acts_upstream_of_or_within ISO MGI:1856829 (PMID:3803305) RGD PMID:3803305 NCBI chr 7:98,418,293...98,603,210
Ensembl chr 7:98,418,293...98,603,210 		JBrowse link
G Ttr transthyretin TAS RGD PMID:11995998 RGD:737655 NCBI chr18:11,941,791...11,951,008
Ensembl chr18:11,943,789...11,951,008 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20536
    cellular process 19526
      metabolic process 12168
        modified amino acid metabolic process 200
          4-hydroxyproline metabolic process + 8
          L-dopa metabolic process + 1
          L-methionine biosynthetic process from O-phospho-L-homoserine and cystathionine 0
          N(omega),N(omega)-dimethyl-L-arginine metabolic process + 1
          N(omega)-methyl-L-arginine metabolic process + 0
          S-adenosylhomocysteine metabolic process + 8
          S-methylmethionine metabolic process + 1
          aerobactin metabolic process + 0
          amino-acid betaine metabolic process + 19
          argininosuccinate metabolic process 2
          coenzyme B metabolic process + 0
          creatine metabolic process + 3
          cyanophycin metabolic process 0
          folic acid-containing compound metabolic process + 27
          fructoseglycine metabolic process 0
          glutathione metabolic process + 66
          glyphosate metabolic process 0
          hydroxylysine metabolic process + 2
          hypusine metabolic process 0
          lincomycin metabolic process + 0
          modified amino acid biosynthetic process + 39
          modified amino acid catabolic process + 29
          modified histidine metabolic process + 0
          ochratoxin A metabolic process + 0
          pantothenate metabolic process + 2
          peptidyl-proline hydroxylation to 3-hydroxy-L-proline 1
          phosphagen metabolic process + 4
          phosphatidylserine metabolic process + 20
          prenylcysteine metabolic process + 2
          pyrrolysine metabolic process + 0
          sarcosine metabolic process + 2
          thyroid hormone metabolic process + 35
paths to the root