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ONTOLOGY REPORT - ANNOTATIONS
Term:cellular modified amino acid metabolic process
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Accession:GO:0006575 term browser browse the term
Definition:The chemical reactions and pathways involving compounds derived from amino acids, organic acids containing one or more amino substituents.
Synonyms:exact_synonym: amino acid derivative metabolic process;   cellular amino acid derivative metabolic process;   cellular amino acid derivative metabolism;   cellular modified amino acid metabolism;   modified amino acid metabolic process;   modified amino acid metabolism

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cellular modified amino acid metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Kyat1 kynurenine aminotransferase 1 JBrowse link 3 8,752,289 8,785,617 RGD:1600115
10-formyltetrahydrofolate biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC680432 similar to methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase JBrowse link 3 121,490,787 121,493,932 RGD:13792537
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 JBrowse link 6 99,282,850 99,350,367 RGD:1624291
RGD:13792537
G Mthfd1l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like JBrowse link 1 40,529,092 40,719,232 RGD:1624291
RGD:13792537
10-formyltetrahydrofolate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aldh1l1 aldehyde dehydrogenase 1 family, member L1 JBrowse link 4 123,516,553 123,564,067 RGD:1600115
G Aldh1l2 aldehyde dehydrogenase 1 family, member L2 JBrowse link 7 26,375,866 26,425,838 RGD:1600115
10-formyltetrahydrofolate metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mthfd2l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like JBrowse link 14 18,640,274 18,721,298 RGD:7244288
4-hydroxyproline catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hoga1 4-hydroxy-2-oxoglutarate aldolase 1 JBrowse link 1 261,291,742 261,319,743 RGD:1624291
amino-acid betaine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bhmt betaine-homocysteine S-methyltransferase JBrowse link 2 23,236,573 23,256,158 RGD:1600115
G Dmgdh dimethylglycine dehydrogenase JBrowse link 2 23,289,376 23,370,360 RGD:1600115
amino-acid betaine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bhmt betaine-homocysteine S-methyltransferase JBrowse link 2 23,236,573 23,256,158 RGD:1624291
RGD:1600115
G Bhmt2 betaine-homocysteine S-methyltransferase 2 JBrowse link 2 23,272,320 23,289,266 RGD:1624291
argininosuccinate metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Asl argininosuccinate lyase JBrowse link 12 30,160,922 30,178,348 RGD:1599287
RGD:2300098
G Ass1 argininosuccinate synthase 1 JBrowse link 3 10,327,411 10,375,847 RGD:2300098
RGD:13792537
RGD:1624291
carnitine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acadm acyl-CoA dehydrogenase medium chain JBrowse link 2 260,124,418 260,148,589 RGD:1624291
G Aldh9a1 aldehyde dehydrogenase 9 family, member A1 JBrowse link 13 85,580,828 85,597,497 RGD:68317
RGD:1600115
G Bbox1 gamma-butyrobetaine hydroxylase 1 JBrowse link 3 101,425,684 101,474,848 RGD:632240
RGD:13792537
RGD:1624291
RGD:8554503
RGD:1600115
G Tmlhe trimethyllysine hydroxylase, epsilon JBrowse link 20 237,461 285,125 RGD:70558
RGD:13792537
RGD:1624291
RGD:1600115
carnitine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acadl acyl-CoA dehydrogenase, long chain JBrowse link 9 73,833,368 73,871,857 RGD:1624291
carnitine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acadm acyl-CoA dehydrogenase medium chain JBrowse link 2 260,124,418 260,148,589 RGD:1624291
G Aldh9a1 aldehyde dehydrogenase 9 family, member A1 JBrowse link 13 85,580,828 85,597,497 RGD:1624291
G Cpt1a carnitine palmitoyltransferase 1A JBrowse link 1 218,568,157 218,629,679 RGD:1298786
RGD:13792537
RGD:1624291
RGD:8554544
G Cpt1b carnitine palmitoyltransferase 1B JBrowse link 7 130,395,211 130,404,731 RGD:13792537
G Cpt1c carnitine palmitoyltransferase 1c JBrowse link 1 100,955,094 100,970,579 RGD:2317579
RGD:13792537
G Crot carnitine O-octanoyltransferase JBrowse link 4 22,079,837 22,116,265 RGD:1600115
RGD:1624291
G Por cytochrome p450 oxidoreductase JBrowse link 12 23,998,411 24,017,063 RGD:4889829
G Slc22a4 solute carrier family 22 member 4 JBrowse link 10 39,334,972 39,373,508 RGD:1624291
G Slc22a5 solute carrier family 22 member 5 JBrowse link 10 39,201,101 39,228,090 RGD:1624291
carnitine metabolic process, CoA-linked term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acadl acyl-CoA dehydrogenase, long chain JBrowse link 9 73,833,368 73,871,857 RGD:1624291
RGD:13792537
G Acadm acyl-CoA dehydrogenase medium chain JBrowse link 2 260,124,418 260,148,589 RGD:1624291
RGD:1600115
G Crat carnitine O-acetyltransferase JBrowse link 3 8,967,984 8,981,959 RGD:1600115
RGD:1624291
RGD:13792537
carnosine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Carns1 carnosine synthase 1 JBrowse link 1 219,413,897 219,424,533 RGD:1624291
RGD:13792537
G Hao2 hydroxyacid oxidase 2 JBrowse link 2 200,785,492 200,808,868 RGD:13792537
carnosine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Carnmt1 carnosine N-methyltransferase 1 JBrowse link 1 234,675,442 234,704,856 RGD:10047234
RGD:1624291
RGD:13792537
RGD:1600115
creatine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gamt guanidinoacetate N-methyltransferase JBrowse link 7 12,314,848 12,317,998 RGD:1359081
RGD:13792537
RGD:1624291
RGD:1600115
RGD:632754
G Gatm glycine amidinotransferase JBrowse link 3 114,711,570 114,728,155 RGD:70746
RGD:13792537
RGD:1600115
RGD:1624291
creatine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gatm glycine amidinotransferase JBrowse link 3 114,711,570 114,728,155 RGD:1624291
dihydrofolate metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase JBrowse link 9 78,862,013 78,882,061 RGD:5144056
G Dhfr dihydrofolate reductase JBrowse link 2 21,931,887 21,958,927 RGD:1298877
RGD:13792537
RGD:1624291
RGD:2300196
folic acid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mthfs methenyltetrahydrofolate synthetase JBrowse link 8 96,564,877 96,614,386 RGD:1624291
G Pm20d2 peptidase M20 domain containing 2 JBrowse link 5 48,416,005 48,437,054 RGD:13792537
folic acid metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dhfr dihydrofolate reductase JBrowse link 2 21,931,887 21,958,927 RGD:10054082
RGD:13792537
G Folr1 folate receptor alpha JBrowse link 1 166,934,457 166,945,864 RGD:1624291
G Gnmt glycine N-methyltransferase JBrowse link 9 16,565,274 16,568,626 RGD:728472
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase JBrowse link 1 37,743,089 37,774,485 RGD:1624291
RGD:1600115
G Shmt1 serine hydroxymethyltransferase 1 JBrowse link 10 47,030,813 47,059,216 RGD:1624291
RGD:13792537
G Shmt2 serine hydroxymethyltransferase 2 JBrowse link 7 70,824,718 70,829,822 RGD:13792537
folic acid-containing compound biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fpgs folylpolyglutamate synthase JBrowse link 3 11,717,667 11,729,694 RGD:13792537
G Mthfs methenyltetrahydrofolate synthetase JBrowse link 8 96,564,877 96,614,386 RGD:13792537
folic acid-containing compound metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Folh1 folate hydrolase 1 JBrowse link 1 150,323,768 150,395,415 RGD:1624291
RGD:1600115
G Fpgs folylpolyglutamate synthase JBrowse link 3 11,717,667 11,729,694 RGD:1624291
G Mthfd1l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like JBrowse link 1 40,529,092 40,719,232 RGD:1624291
glutathione biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gclc glutamate-cysteine ligase, catalytic subunit JBrowse link 8 85,059,051 85,097,471 RGD:1582661
RGD:1624291
RGD:13792537
RGD:1600115
G Gclm glutamate cysteine ligase, modifier subunit JBrowse link 2 225,827,504 225,847,876 RGD:1582661
RGD:1624291
RGD:13792537
RGD:1600115
G Ggt1 gamma-glutamyltransferase 1 JBrowse link 20 14,019,723 14,045,781 RGD:1624291
G Ggt5 gamma-glutamyltransferase 5 JBrowse link 20 13,988,444 14,001,296 RGD:1600115
G Ggt6 gamma-glutamyl transferase 6 JBrowse link 10 58,995,253 58,998,431 RGD:1600115
G Ggt7 gamma-glutamyltransferase 7 JBrowse link 3 151,005,960 151,029,941 RGD:1600115
G Gss glutathione synthetase JBrowse link 3 151,076,254 151,106,557 RGD:1599340
RGD:1600115
G Hagh hydroxyacyl glutathione hydrolase JBrowse link 10 14,215,913 14,230,506 RGD:1600115
RGD:1624291
G Mgst2 microsomal glutathione S-transferase 2 JBrowse link 2 140,708,396 140,727,381 RGD:1624291
glutathione catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07044631.2 RGD:1600115
G Chac1 ChaC glutathione-specific gamma-glutamylcyclotransferase 1 JBrowse link 3 111,160,205 111,163,425 RGD:13792537
G Chac2 ChaC cation transport regulator 2 JBrowse link 14 115,383,906 115,391,757 RGD:13792537
G Dpep1 dipeptidase 1 JBrowse link 19 55,973,447 55,998,830 RGD:1600115
RGD:1624291
G Ggt1 gamma-glutamyltransferase 1 JBrowse link 20 14,019,723 14,045,781 RGD:1600115
RGD:13792537
RGD:1624291
G Ggt5 gamma-glutamyltransferase 5 JBrowse link 20 13,988,444 14,001,296 RGD:1624291
RGD:13792537
G Ggt7 gamma-glutamyltransferase 7 JBrowse link 3 151,005,960 151,029,941 RGD:13792537
glutathione deglycation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Park7 Parkinsonism associated deglycase JBrowse link 5 167,982,438 168,004,724 RGD:1624291
RGD:1600115
glutathione metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cth cystathionine gamma-lyase JBrowse link 2 264,266,959 264,293,040 RGD:1600763
G Ctns cystinosin, lysosomal cystine transporter JBrowse link 10 59,749,250 59,772,475 RGD:1624291
G Ethe1 ETHE1, persulfide dioxygenase JBrowse link 1 81,457,008 81,472,061 RGD:1624291
RGD:13792537
G G6pd glucose-6-phosphate dehydrogenase JBrowse link X 156,274,800 156,293,935 RGD:1624291
G Gclc glutamate-cysteine ligase, catalytic subunit JBrowse link 8 85,059,051 85,097,471 RGD:1624291
G Gclm glutamate cysteine ligase, modifier subunit JBrowse link 2 225,827,504 225,847,876 RGD:1624291
G Glo1 glyoxalase 1 JBrowse link 20 9,273,589 9,291,608 RGD:1641958
RGD:1641959
G Gpx1 glutathione peroxidase 1 JBrowse link 8 117,117,430 117,118,528 RGD:1624364
RGD:1600115
RGD:13792537
RGD:1624291
G Gpx3 glutathione peroxidase 3 JBrowse link 10 40,247,436 40,255,423 RGD:1624364
G Gpx4 glutathione peroxidase 4 JBrowse link 7 12,516,357 12,519,154 RGD:1624364
G Gsr glutathione-disulfide reductase JBrowse link 16 62,197,617 62,239,987 RGD:1625133
RGD:13792537
RGD:1600115
G Gsta1 glutathione S-transferase alpha 1 JBrowse link 9 27,366,404 27,381,004 RGD:1624291
RGD:13792537
G Gsta2 glutathione S-transferase alpha 2 JBrowse link 8 85,640,081 85,645,621 RGD:13792537
G Gsta3 glutathione S-transferase alpha 3 JBrowse link 9 27,357,490 27,417,023 RGD:13792537
G Gsta4 glutathione S-transferase alpha 4 JBrowse link 8 85,497,557 85,514,732 RGD:1624291
RGD:13792537
G Gsta5 glutathione S-transferase alpha 5 JBrowse link 8 85,553,659 85,564,914 RGD:13792537
G Gsta6 glutathione S-transferase alpha 6 JBrowse link 9 27,475,273 27,533,939 RGD:1600115
RGD:13792537
G Gstk1 glutathione S-transferase kappa 1 JBrowse link 4 71,621,777 71,626,096 RGD:1624291
RGD:13792537
G Gstm1 glutathione S-transferase mu 1 JBrowse link 2 210,803,869 210,809,461 RGD:2302181
RGD:13792537
RGD:1624291
RGD:70307
G Gstm2 glutathione S-transferase mu 2 JBrowse link 2 210,778,041 210,782,807 RGD:2302181
RGD:1600115
RGD:13792537
RGD:1624291
G Gstm3 glutathione S-transferase mu 3 JBrowse link 2 210,685,204 210,688,273 RGD:1600115
RGD:13792537
RGD:1624291
G Gstm3l glutathione S-transferase mu 3-like JBrowse link 2 210,761,729 210,766,501 RGD:1624291
RGD:13792537
G Gstm4 glutathione S-transferase mu 4 JBrowse link 2 210,834,013 210,839,242 RGD:1624291
RGD:13792537
G Gstm5 glutathione S-transferase, mu 5 JBrowse link 2 210,685,338 210,688,133 RGD:1600115
RGD:13792537
RGD:1624291
G Gstm6 glutathione S-transferase, mu 6 JBrowse link 2 210,733,594 210,738,368 RGD:13792537
G Gstm6l glutathione S-transferase, mu 6-like JBrowse link 2 210,698,155 210,703,265 RGD:13792537
G Gstm7 glutathione S-transferase, mu 7 JBrowse link 2 210,720,719 210,726,179 RGD:13792537
RGD:1600115
G Gstp1 glutathione S-transferase pi 1 JBrowse link 1 219,291,679 219,294,147 RGD:1624291
RGD:13792537
G Gstt1 glutathione S-transferase theta 1 JBrowse link 20 13,799,102 13,816,527 RGD:8554299
RGD:13792537
RGD:1624291
G Gstt2 glutathione S-transferase, theta 2 JBrowse link 20 13,760,810 13,764,481 RGD:8553858
RGD:13792537
G Gstt3 glutathione S-transferase, theta 3 JBrowse link 20 13,817,795 13,825,475 RGD:13792537
G Gstt4 glutathione S-transferase, theta 4 JBrowse link 20 13,778,185 13,784,813 RGD:13792537
G Gstz1 glutathione S-transferase zeta 1 JBrowse link 6 111,176,798 111,187,246 RGD:1624291
RGD:13792537
G Hagh hydroxyacyl glutathione hydrolase JBrowse link 10 14,215,913 14,230,506 RGD:1641958
RGD:1641959
G Hbb hemoglobin subunit beta JBrowse link 1 168,971,269 168,972,680 RGD:2325281
G Hmgn5 high mobility group nucleosome binding domain 5 JBrowse link X 80,134,557 80,142,902 RGD:1624291
G Hpgds hematopoietic prostaglandin D synthase JBrowse link 4 95,945,356 95,970,666 RGD:13792537
G Idh1 isocitrate dehydrogenase (NADP(+)) 1 JBrowse link 9 71,882,108 71,911,645 RGD:1624291
G LOC103694878 glutathione S-transferase theta-2-like RGD:13792537
G LOC103694879 glutathione S-transferase theta-2-like RGD:13792537
G LOC108348061 glutathione S-transferase alpha-3 JBrowse link 9 27,436,255 27,452,897 RGD:13792537
G Mgst1 microsomal glutathione S-transferase 1 JBrowse link 4 172,119,382 172,134,609 RGD:1624291
G Mmachc metabolism of cobalamin associated C JBrowse link 5 135,555,587 135,561,723 RGD:1624291
G Nat8 N-acetyltransferase 8 JBrowse link 4 117,525,963 117,527,443 RGD:1600115
RGD:1624291
G Nfe2l1 nuclear factor, erythroid 2-like 1 JBrowse link 10 84,686,762 84,699,313 RGD:1624291
G Oplah 5-oxoprolinase (ATP-hydrolysing) JBrowse link 7 117,353,951 117,394,205 RGD:13792537
G RGD1307603 similar to hypothetical protein MGC37914 JBrowse link 1 219,309,593 219,312,240 RGD:13792537
G RGD1562107 similar to class-alpha glutathione S-transferase JBrowse link 9 27,311,229 27,324,452 RGD:13792537
G Slc7a11 solute carrier family 7 member 11 JBrowse link 2 139,453,774 139,528,479 RGD:1624291
G Sod1 superoxide dismutase 1 JBrowse link 11 30,363,282 30,368,858 RGD:1624291
RGD:1600115
G Sod2 superoxide dismutase 2 JBrowse link 1 47,914,757 47,921,587 RGD:1624291
G Txnrd3 thioredoxin reductase 3 JBrowse link 4 121,612,332 121,650,543 RGD:1624291
glycine betaine biosynthetic process from choline term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aldh7a1 aldehyde dehydrogenase 7 family, member A1 JBrowse link 18 51,619,007 51,651,267 RGD:1600115
G Chdh choline dehydrogenase JBrowse link 16 6,078,083 6,109,386 RGD:1600115
hydroxylysine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Plod2 procollagen lysine, 2-oxoglutarate 5-dioxygenase 2 JBrowse link 8 99,977,334 100,059,736 RGD:1600115
RGD:1624291
G Plod3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 JBrowse link 12 22,716,421 22,726,982 RGD:1624291
pantothenate metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Vnn1 vanin 1 JBrowse link 1 22,614,832 22,625,134 RGD:1624291
RGD:13792537
G Vnn3 vanin 3 JBrowse link 1 22,649,114 22,661,376 RGD:1624291
RGD:13792537
phosphatidylserine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Plscr1 phospholipid scramblase 1 JBrowse link 8 99,625,523 99,645,882 RGD:1600115
RGD:1624291
G Ptdss1 phosphatidylserine synthase 1 JBrowse link 7 71,294,140 71,356,153 RGD:1600115
G Ptdss2 phosphatidylserine synthase 2 JBrowse link 1 214,122,981 214,148,011 RGD:1600115
RGD:1624291
G Slc27a1 solute carrier family 27 member 1 JBrowse link 16 19,997,823 20,016,193 RGD:1600115
RGD:13792537
RGD:1624291
phosphatidylserine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abhd12 abhydrolase domain containing 12, lysophospholipase JBrowse link 3 146,630,298 146,690,375 RGD:1624291
RGD:13792537
RGD:1600115
G Abhd12b abhydrolase domain containing 12B JBrowse link 6 92,568,975 92,596,327 RGD:13792537
G Abhd16a abhydrolase domain containing 16A, phospholipase JBrowse link 20 5,080,070 5,094,935 RGD:1600115
RGD:13792537
RGD:1624291
G Abhd16b abhydrolase domain containing 16B JBrowse link 3 176,985,900 176,987,797 RGD:13792537
phosphatidylserine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lipc lipase C, hepatic type JBrowse link 8 77,272,582 77,398,485 RGD:1600650
G Serinc1 serine incorporator 1 JBrowse link 20 38,966,016 38,985,056 RGD:8553290
G Serinc2 serine incorporator 2 JBrowse link 5 148,470,060 148,492,232 RGD:8553290
G Serinc3 serine incorporator 3 JBrowse link 3 160,018,643 160,038,078 RGD:8553290
G Serinc5 serine incorporator 5 JBrowse link 2 22,195,507 22,310,289 RGD:8553290
RGD:1600115
phosphocreatine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ckb creatine kinase B JBrowse link 6 136,142,956 136,145,838 RGD:13792537
G Ckm creatine kinase, M-type JBrowse link 1 80,321,507 80,331,841 RGD:727227
RGD:13792537
RGD:1600115
RGD:1624291
RGD:1359082
G Ckmt1 creatine kinase, mitochondrial 1 JBrowse link 3 113,318,559 113,324,459 RGD:13792537
RGD:1600115
G Ckmt2 creatine kinase, mitochondrial 2 JBrowse link 2 21,422,680 21,452,797 RGD:13792537
positive regulation of glutathione biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 JBrowse link 4 98,648,513 98,709,695 RGD:1624291
G Nfe2l2 nuclear factor, erythroid 2-like 2 JBrowse link 3 62,497,568 62,525,146 RGD:1624291
positive regulation of L-dopa biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Park7 Parkinsonism associated deglycase JBrowse link 5 167,982,438 168,004,724 RGD:1624291
RGD:1600115
positive regulation of thyroid hormone generation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gata3 GATA binding protein 3 JBrowse link 17 72,419,752 72,452,043 RGD:1600115
RGD:1624291
G Hpn hepsin JBrowse link 1 89,534,112 89,549,575 RGD:1624291
RGD:1600115
G Pax8 paired box 8 JBrowse link 3 1,527,316 1,586,019 RGD:1624291
RGD:1600115
G Slco1c1 solute carrier organic anion transporter family, member 1c1 JBrowse link 4 175,729,709 175,776,749 RGD:1624291
RGD:1600115
prenylcysteine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pcyox1 prenylcysteine oxidase 1 JBrowse link 4 118,187,133 118,198,029 RGD:1624291
G Pcyox1l prenylcysteine oxidase 1 like JBrowse link 18 57,021,081 57,031,552 RGD:1600115
regulation of glutathione biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc7a11 solute carrier family 7 member 11 JBrowse link 2 139,453,774 139,528,479 RGD:1624291
regulation of phosphatidylserine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mfsd2a major facilitator superfamily domain containing 2A JBrowse link 5 140,642,865 140,657,759 RGD:1624291
regulation of thyroid hormone generation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Duoxa1 dual oxidase maturation factor 1 JBrowse link 3 114,241,057 114,251,720 RGD:1624291
G Duoxa2 dual oxidase maturation factor 2 JBrowse link 3 114,236,718 114,240,086 RGD:1624291
S-adenosylhomocysteine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ahcy adenosylhomocysteinase JBrowse link 3 150,587,833 150,603,057 RGD:730275
RGD:1624291
S-adenosylhomocysteine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Comt catechol-O-methyltransferase JBrowse link 11 86,715,981 86,735,630 RGD:1359089
G Gamt guanidinoacetate N-methyltransferase JBrowse link 7 12,314,848 12,317,998 RGD:1359081
G Gnmt glycine N-methyltransferase JBrowse link 9 16,565,274 16,568,626 RGD:1359070
RGD:13792537
RGD:12793006
G Icmt isoprenylcysteine carboxyl methyltransferase JBrowse link 5 169,475,270 169,482,031 RGD:2289655
G LOC100911564 glycine N-methyltransferase-like JBrowse link 9 16,314,136 16,317,575 RGD:13792537
G Pcmt1 protein-L-isoaspartate (D-aspartate) O-methyltransferase 1 JBrowse link 1 1,734,863 1,767,759 RGD:729481
G Pemt phosphatidylethanolamine N-methyltransferase JBrowse link 10 46,339,821 46,404,640 RGD:729486
G Pnmt phenylethanolamine-N-methyltransferase JBrowse link 10 86,340,893 86,342,501 RGD:1359087
S-methylmethionine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bhmt2 betaine-homocysteine S-methyltransferase 2 JBrowse link 2 23,272,320 23,289,266 RGD:1624291
RGD:1600115
sarcosine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sardh sarcosine dehydrogenase JBrowse link 3 5,737,203 5,802,153 RGD:13792537
sarcosine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gnmt glycine N-methyltransferase JBrowse link 9 16,565,274 16,568,626 RGD:7242952
RGD:13792537
G LOC100911564 glycine N-methyltransferase-like JBrowse link 9 16,314,136 16,317,575 RGD:13792537
tetrahydrofolate biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aldh1l1 aldehyde dehydrogenase 1 family, member L1 JBrowse link 4 123,516,553 123,564,067 RGD:1547843
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase JBrowse link 9 78,862,013 78,882,061 RGD:2301991
G Dhfr dihydrofolate reductase JBrowse link 2 21,931,887 21,958,927 RGD:1298877
RGD:13792537
RGD:1624291
RGD:1600115
G Gart phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase JBrowse link 11 31,780,477 31,805,728 RGD:2301990
G Gch1 GTP cyclohydrolase 1 JBrowse link 15 23,935,011 23,968,971 RGD:1600115
tetrahydrofolate interconversion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dmgdh dimethylglycine dehydrogenase JBrowse link 2 23,289,376 23,370,360 RGD:7245485
G Ftcd formimidoyltransferase cyclodeaminase JBrowse link 20 12,806,957 12,820,466 RGD:1600115
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 JBrowse link 6 99,282,850 99,350,367 RGD:1600115
RGD:1624291
G Mthfd2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase JBrowse link 4 115,004,433 115,015,965 RGD:13792537
G Mthfd2l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like JBrowse link 14 18,640,274 18,721,298 RGD:7244288
RGD:13792537
RGD:1600115
G Mthfr methylenetetrahydrofolate reductase JBrowse link 5 164,844,642 164,864,360 RGD:1600115
RGD:13792537
RGD:1624291
G Mthfs methenyltetrahydrofolate synthetase JBrowse link 8 96,564,877 96,614,386 RGD:1624291
RGD:13792537
G Sardh sarcosine dehydrogenase JBrowse link 3 5,737,203 5,802,153 RGD:7245485
G Shmt1 serine hydroxymethyltransferase 1 JBrowse link 10 47,030,813 47,059,216 RGD:1624291
RGD:13792537
RGD:1600115
G Shmt2 serine hydroxymethyltransferase 2 JBrowse link 7 70,824,718 70,829,822 RGD:1600115
G Tyms thymidylate synthetase JBrowse link 9 121,918,875 121,931,564 RGD:1624291
tetrahydrofolate metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dhfr dihydrofolate reductase JBrowse link 2 21,931,887 21,958,927 RGD:1600115
RGD:1624291
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 JBrowse link 6 99,282,850 99,350,367 RGD:1299513
G Mthfd2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase JBrowse link 4 115,004,433 115,015,965 RGD:1624291
G Mthfr methylenetetrahydrofolate reductase JBrowse link 5 164,844,642 164,864,360 RGD:1601423
G Mthfs methenyltetrahydrofolate synthetase JBrowse link 8 96,564,877 96,614,386 RGD:1624291
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase JBrowse link 17 66,210,444 66,295,014 RGD:1601423
RGD:7207080
G Pipox pipecolic acid and sarcosine oxidase JBrowse link 10 64,951,986 64,964,865 RGD:1600115
G Shmt1 serine hydroxymethyltransferase 1 JBrowse link 10 47,030,813 47,059,216 RGD:1624291
RGD:13792537
G Shmt2 serine hydroxymethyltransferase 2 JBrowse link 7 70,824,718 70,829,822 RGD:1624291
RGD:13792537
G Tyms thymidylate synthetase JBrowse link 9 121,918,875 121,931,564 RGD:5133451
tetrahydrofolylpolyglutamate biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fpgs folylpolyglutamate synthase JBrowse link 3 11,717,667 11,729,694 RGD:1624291
RGD:13792537
tetrahydrofolylpolyglutamate metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ggh gamma-glutamyl hydrolase JBrowse link 5 34,040,258 34,063,369 RGD:13792537
thyroid hormone catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dio2 iodothyronine deiodinase 2 JBrowse link 6 114,475,156 114,489,443 RGD:1624291
G Dio3 iodothyronine deiodinase 3 JBrowse link 6 134,627,278 134,629,139 RGD:1624291
thyroid hormone generation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cga glycoprotein hormones, alpha polypeptide JBrowse link 5 50,362,491 50,393,368 RGD:1624291
RGD:13792537
G Cpq carboxypeptidase Q JBrowse link 7 71,709,174 72,167,413 RGD:8554022
RGD:13792537
G Ctsb cathepsin B JBrowse link 15 46,316,741 46,337,613 RGD:1600115
RGD:1624291
G Ctsk cathepsin K JBrowse link 2 196,655,469 196,666,447 RGD:1600115
RGD:1624291
G Ctsl cathepsin L JBrowse link 17 1,873,105 1,879,266 RGD:1624291
G Dio2 iodothyronine deiodinase 2 JBrowse link 6 114,475,156 114,489,443 RGD:1626436
G Duox1 dual oxidase 1 JBrowse link 3 114,251,794 114,286,827 RGD:1600115
G Duox2 dual oxidase 2 JBrowse link 3 114,218,187 114,237,808 RGD:632568
RGD:1600115
G Foxe1 forkhead box E1 JBrowse link 5 61,954,549 61,957,357 RGD:1624291
G Med1 mediator complex subunit 1 JBrowse link 10 86,101,560 86,145,271 RGD:1624291
G Slc16a10 solute carrier family 16 member 10 JBrowse link 20 45,138,433 45,260,155 RGD:1624291
RGD:1600115
G Slc16a2 solute carrier family 16 member 2 JBrowse link X 74,578,600 74,706,068 RGD:1624291
RGD:1600115
G Slc5a5 solute carrier family 5 member 5 JBrowse link 16 20,297,414 20,307,401 RGD:68854
RGD:1600115
G Tg thyroglobulin JBrowse link 7 107,467,260 107,652,897 RGD:728752
RGD:1624291
RGD:13792537
RGD:1600115
RGD:1600150
G Tpo thyroid peroxidase JBrowse link 6 49,020,918 49,089,855 RGD:1599649
RGD:1624291
RGD:1600115
thyroid hormone metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AC118957.1 RGD:13792537
G Crym crystallin, mu JBrowse link 1 189,944,895 189,960,069 RGD:1624291
RGD:13792537
RGD:1600115
G Dio1 iodothyronine deiodinase 1 JBrowse link 5 126,894,837 126,911,532 RGD:13792537
G Dio2 iodothyronine deiodinase 2 JBrowse link 6 114,475,156 114,489,443 RGD:628323
RGD:13792537
RGD:1624291
RGD:1626436
G Dio3 iodothyronine deiodinase 3 JBrowse link 6 134,627,278 134,629,139 RGD:68236
RGD:13792537
G Duox2 dual oxidase 2 JBrowse link 3 114,218,187 114,237,808 RGD:1624291
RGD:1600115
G Gcnt4 glucosaminyl (N-acetyl) transferase 4 RGD:1624291
RGD:1600115
G Iyd iodotyrosine deiodinase JBrowse link 1 40,086,513 40,100,966 RGD:1624291
RGD:13792537
RGD:1600115
G Kcnj6 potassium inwardly-rectifying channel, subfamily J, member 6 JBrowse link 11 35,011,007 35,262,362 RGD:1624291
G Reln reelin JBrowse link 4 9,347,533 9,774,257 RGD:1624291
G Slco4a1 solute carrier organic anion transporter family, member 4a1 JBrowse link 3 175,838,994 175,857,985 RGD:727314
G Sult1b1 sulfotransferase family 1B member 1 JBrowse link 14 22,142,412 22,155,246 RGD:1624291
G Tg thyroglobulin JBrowse link 7 107,467,260 107,652,897 RGD:1624291
G Ttr transthyretin JBrowse link 18 15,532,963 15,542,180 RGD:737655
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19576
    metabolic process 11899
      cellular metabolic process 10737
        cellular modified amino acid metabolic process 182
          (3-aminopropyl)(L-aspartyl-1-amino)phosphoryl-5'-adenosine biosynthetic process from asparagine 0
          4-hydroxyproline metabolic process + 1
          L-dopa metabolic process + 1
          L-methionine biosynthetic process from O-phospho-L-homoserine and cystathionine 0
          N(omega),N(omega)-dimethyl-L-arginine metabolic process + 0
          N(omega)-methyl-L-arginine metabolic process + 0
          O3-(N-acetylglucosamine-1-phosphoryl)-L-serine biosynthetic process 0
          S-adenosylhomocysteine metabolic process + 9
          S-methylmethionine metabolic process + 1
          aerobactin metabolic process + 0
          amino-acid betaine metabolic process + 18
          argininosuccinate metabolic process 2
          carnosine metabolic process + 3
          cellular modified histidine metabolic process + 0
          coenzyme B metabolic process + 0
          creatine metabolic process + 2
          cyanophycin metabolic process 0
          folic acid-containing compound metabolic process + 28
          fructoseglycine metabolic process 0
          glutathione metabolic process + 65
          glyphosate metabolic process 0
          hydroxylysine metabolic process + 2
          hypusine metabolic process 0
          lincomycin metabolic process + 0
          nopaline metabolic process + 0
          ochratoxin A metabolic process + 0
          octopine metabolic process + 0
          pantothenate metabolic process + 2
          peptidyl-1-thioglycine biosynthetic process from peptidyl-glycine + 0
          peptidyl-glycine cholesteryl ester biosynthesis from peptidyl-glycine 0
          phosphagen metabolic process + 4
          phosphatidylserine metabolic process + 14
          prenylcysteine metabolic process + 2
          pyrrolysine metabolic process + 0
          sarcosine metabolic process + 3
          thyroid hormone metabolic process + 32
Path 2
Term Annotations click to browse term
  biological_process 19576
    metabolic process 11899
      nitrogen compound metabolic process 10025
        organonitrogen compound metabolic process 6969
          cellular modified amino acid metabolic process 182
            (3-aminopropyl)(L-aspartyl-1-amino)phosphoryl-5'-adenosine biosynthetic process from asparagine 0
            4-hydroxyproline metabolic process + 1
            L-dopa metabolic process + 1
            L-methionine biosynthetic process from O-phospho-L-homoserine and cystathionine 0
            N(omega),N(omega)-dimethyl-L-arginine metabolic process + 0
            N(omega)-methyl-L-arginine metabolic process + 0
            O3-(N-acetylglucosamine-1-phosphoryl)-L-serine biosynthetic process 0
            S-adenosylhomocysteine metabolic process + 9
            S-methylmethionine metabolic process + 1
            aerobactin metabolic process + 0
            amino-acid betaine metabolic process + 18
            argininosuccinate metabolic process 2
            carnosine metabolic process + 3
            cellular modified histidine metabolic process + 0
            coenzyme B metabolic process + 0
            creatine metabolic process + 2
            cyanophycin metabolic process 0
            folic acid-containing compound metabolic process + 28
            fructoseglycine metabolic process 0
            glutathione metabolic process + 65
            glyphosate metabolic process 0
            hydroxylysine metabolic process + 2
            hypusine metabolic process 0
            lincomycin metabolic process + 0
            nopaline metabolic process + 0
            ochratoxin A metabolic process + 0
            octopine metabolic process + 0
            pantothenate metabolic process + 2
            peptidyl-1-thioglycine biosynthetic process from peptidyl-glycine + 0
            peptidyl-glycine cholesteryl ester biosynthesis from peptidyl-glycine 0
            phosphagen metabolic process + 4
            phosphatidylserine metabolic process + 14
            prenylcysteine metabolic process + 2
            pyrrolysine metabolic process + 0
            sarcosine metabolic process + 3
            thyroid hormone metabolic process + 32
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.