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lamellar body - Ontology Report - Rat Genome Database

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ONTOLOGY REPORT - ANNOTATIONS

Term:lamellar body
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Accession:GO:0042599 term browser browse the term
Definition:A membrane-bounded organelle, specialized for the storage and secretion of various substances (surfactant phospholipids, glycoproteins and acid phosphates) which are arranged in the form of tightly packed, concentric, membrane sheets or lamellae. Has some similar properties to, but is distinct from, a lysosome.
Synonyms:exact_synonym: lamellar granule;   membrane-coating granule
 narrow_synonym: Odland body;   keratinosome
 xref: NIF_Subcellular:sao1379604862

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lamellar body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca3 ATP binding cassette subfamily A member 3 located_in ISO
IEA		 (PMID:27177387)
GO_REF:0000107		 RGD
Ensembl		 PMID:27177387 GO_REF:0000107 NCBI chr10:13,886,948...13,944,286
Ensembl chr10:13,382,540...13,439,745 		JBrowse link
G Clip2 CAP-GLY domain containing linker protein 2 IDA RGD PMID:9427243 RGD:61566 NCBI chr12:27,798,289...27,863,486
Ensembl chr12:22,163,218...22,227,023 		JBrowse link
G Krtdap keratinocyte differentiation associated protein located_in ISO
IEA		 (PMID:15140226)
GO_REF:0000107		 RGD
Ensembl		 PMID:15140226 GO_REF:0000107 NCBI chr 1:95,165,844...95,169,025
Ensembl chr 1:86,038,437...86,041,455 		JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 IDA RGD PMID:12816958 RGD:1601349 NCBI chr 1:169,304,772...169,308,615
Ensembl chr 1:159,892,859...159,896,794 		JBrowse link
alveolar lamellar body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca3 ATP binding cassette subfamily A member 3 located_in ISO
IEA		 (PMID:11718719)
GO_REF:0000107		 RGD
Ensembl		 PMID:11718719 GO_REF:0000107 NCBI chr10:13,886,948...13,944,286
Ensembl chr10:13,382,540...13,439,745 		JBrowse link
G Ctsh cathepsin H located_in IDA
ISS
ISO
IEA		 GO_REF:0000024
(PMID:18216060)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:18216060 PMID:12034564 PMID:2005374 GO_REF:0000024 GO_REF:0000107, RGD:727636, RGD:5686400 NCBI chr 8:99,488,756...99,507,639
Ensembl chr 8:90,608,941...90,627,824 		JBrowse link
G Lamp1 lysosomal-associated membrane protein 1 IDA RGD PMID:7868367 RGD:4892636 NCBI chr16:83,058,131...83,082,843
Ensembl chr16:76,355,984...76,381,883 		JBrowse link
G Napsa napsin A aspartic peptidase located_in ISO
IEA		 (PMID:18216060)
(PMID:14766755)
GO_REF:0000107		 RGD
Ensembl		 PMID:14766755 PMID:18216060 GO_REF:0000107 NCBI chr 1:95,064,726...95,077,101
Ensembl chr 1:95,064,900...95,077,094 		JBrowse link
G Rab14 RAB14, member RAS oncogene family IDA RGD PMID:18332131 RGD:2306298 NCBI chr 3:38,899,430...38,920,572
Ensembl chr 3:18,501,963...18,523,172 		JBrowse link
G Rab7a RAB7A, member RAS oncogene family IDA RGD PMID:7868367 RGD:4892636 NCBI chr 4:122,019,281...122,068,067
Ensembl chr 4:120,461,963...120,506,889 		JBrowse link
G Sftpb surfactant protein B is_active_in IDA
IBA		 MMO:0000110
GO_REF:0000033		 GO_Central
RGD		 PMID:16187065 PMID:2475034 GO_REF:0000033, RGD:4143471, RGD:151667440 NCBI chr 4:105,917,495...105,926,631
Ensembl chr 4:104,359,396...104,368,436 		JBrowse link
G Sftpc surfactant protein C is_active_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:2001226 GO_REF:0000033, RGD:4143485 NCBI chr15:52,006,274...52,009,324
Ensembl chr15:45,596,574...45,610,777 		JBrowse link
alveolar lamellar body membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca3 ATP binding cassette subfamily A member 3 located_in IDA
IEA
ISO		 GO_REF:0000107
(PMID:11940594), (PMID:14982840)
(PMID:11940594), (PMID:16959783)		 Ensembl
RGD		 PMID:11940594 PMID:14982840 PMID:16959783 PMID:11940594 GO_REF:0000107, RGD:1598549 NCBI chr10:13,886,948...13,944,286
Ensembl chr10:13,382,540...13,439,745 		JBrowse link
G Lamp3 lysosomal-associated membrane protein 3 located_in IDA
IEA
ISO		 PMID:20054147
GO_REF:0000107
(PMID:14982840)		 Ensembl
RGD		 PMID:14982840 PMID:20054147 GO_REF:0000107, RGD:11041051 NCBI chr11:94,657,817...94,726,451
Ensembl chr11:81,193,649...81,221,784 		JBrowse link
G Tmem63b transmembrane protein 63B located_in ISO (PMID:38127458) RGD PMID:38127458 NCBI chr 9:15,313,867...15,340,722
Ensembl chr 9:15,320,432...15,340,720 		JBrowse link
epidermal lamellar body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca12 ATP binding cassette subfamily A member 12 located_in ISO
IEA		 (PMID:16007253)
GO_REF:0000107		 RGD
Ensembl		 PMID:16007253 GO_REF:0000107 NCBI chr 9:80,272,121...80,445,340
Ensembl chr 9:72,823,350...72,996,049 		JBrowse link
G Klk5 kallikrein related-peptidase 5 located_in ISO
IEA		 (PMID:15675955)
GO_REF:0000107		 RGD
Ensembl		 PMID:15675955 GO_REF:0000107 NCBI chr 1:103,432,743...103,442,011
Ensembl chr 1:94,296,168...94,304,666 		JBrowse link
G Klk7 kallikrein-related peptidase 7 located_in ISO
IEA		 (PMID:15675955)
GO_REF:0000107		 RGD
Ensembl		 PMID:15675955 GO_REF:0000107 NCBI chr 1:103,403,206...103,407,907
Ensembl chr 1:94,266,605...94,271,332 		JBrowse link
G Spink5 serine peptidase inhibitor, Kazal type 5 located_in ISO
IEA		 (PMID:15675955)
GO_REF:0000107		 RGD
Ensembl		 PMID:15675955 GO_REF:0000107 NCBI chr18:36,515,347...36,584,038
Ensembl chr18:36,264,452...36,332,185 		JBrowse link
epidermal lamellar body membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca12 ATP binding cassette subfamily A member 12 located_in ISO
IEA		 (PMID:17927575)
GO_REF:0000107		 RGD
Ensembl		 PMID:17927575 GO_REF:0000107 NCBI chr 9:80,272,121...80,445,340
Ensembl chr 9:72,823,350...72,996,049 		JBrowse link
lamellar body membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca3 ATP binding cassette subfamily A member 3 located_in ISO
IEA		 (PMID:20863830)
GO_REF:0000107		 RGD
Ensembl		 PMID:20863830 GO_REF:0000107 NCBI chr10:13,886,948...13,944,286
Ensembl chr10:13,382,540...13,439,745 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21366
    cellular anatomical structure 21071
      endomembrane system 4422
        secretory granule 480
          lamellar body 17
            alveolar lamellar body + 10
            dendritic lamellar body 0
            epidermal lamellar body + 4
            lamellar body membrane + 4
Path 2
Term Annotations click to browse term
  cellular_component 21366
    cellular anatomical structure 21071
      organelle 14293
        membrane-bounded organelle 12863
          vesicle 2268
            intracellular vesicle 2081
              cytoplasmic vesicle 2072
                secretory vesicle 747
                  secretory granule 480
                    lamellar body 17
                      alveolar lamellar body + 10
                      dendritic lamellar body 0
                      epidermal lamellar body + 4
                      lamellar body membrane + 4
paths to the root