Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:copper ion transmembrane transport
go back to main search page
Accession:GO:0035434 term browser browse the term
Definition:The directed movement of copper cation across a membrane.
Comment:Note that this term is not intended for use in annotating lateral movement within membranes.
Synonyms:exact_synonym: copper cation transmembrane transport;   copper ion membrane transport
 alt_id: GO:1901473


show annotations for term's descendants           Sort by:
copper ion transmembrane transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7b ATPase copper transporting beta involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr16:69,952,286...70,024,404
Ensembl chr16:69,951,778...70,023,636 		JBrowse link
G Mmgt2 membrane magnesium transporter 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:47,343,446...47,362,889
Ensembl chr10:47,342,922...47,365,757 		JBrowse link
G Slc11a2 solute carrier family 11 member 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:131,503,076...131,540,246
Ensembl chr 7:131,503,081...131,540,145 		JBrowse link
G Slc31a1 solute carrier family 31 member 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:75,814,744...75,844,241
Ensembl chr 5:75,814,743...75,844,228 		JBrowse link
G Slc31a2 solute carrier family 31 member 2 NOT|acts_upstream_of_or_within ISO (PMID:24167251) RGD PMID:24167251 NCBI chr 5:75,738,008...75,748,542
Ensembl chr 5:75,738,024...75,748,542 		JBrowse link
G Slc39a11 solute carrier family 39, member 11 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:98,275,958...98,697,042
Ensembl chr10:98,275,960...98,611,295 		JBrowse link
copper ion export term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atox1 antioxidant 1 copper chaperone IMP RGD PMID:22442359 RGD:8554868 NCBI chr10:39,564,855...39,579,892
Ensembl chr10:39,564,857...39,579,950 		JBrowse link
G Atp7a ATPase copper transporting alpha involved_in
acts_upstream_of_or_within		 IMP
ISS
ISO		 GO_REF:0000024
(PMID:10419525)
MGI:1856097 (PMID:6542992)
(PMID:15634787)		 UniProt
RGD		 PMID:6542992 PMID:10419525 PMID:15634787 PMID:22442359 PMID:26722473 GO_REF:0000024, RGD:8554868, RGD:11341663 NCBI chr  X:71,094,144...71,201,550
Ensembl chr  X:71,094,202...71,198,354 		JBrowse link
G Atp7b ATPase copper transporting beta involved_in IMP
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:24614235 GO_REF:0000033, RGD:11341682 NCBI chr16:69,952,286...70,024,404
Ensembl chr16:69,951,778...70,023,636 		JBrowse link
copper ion import across plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc11a2 solute carrier family 11 member 2 IMP RGD PMID:22442359 RGD:8554868 NCBI chr 7:131,503,076...131,540,246
Ensembl chr 7:131,503,081...131,540,145 		JBrowse link
G Slc31a1 solute carrier family 31 member 1 IMP RGD PMID:22442359 RGD:8554868 NCBI chr 5:75,814,744...75,844,241
Ensembl chr 5:75,814,743...75,844,228 		JBrowse link
G Steap2 STEAP2 metalloreductase acts_upstream_of_or_within ISO (PMID:16609065) RGD PMID:16609065 NCBI chr 4:28,347,769...28,368,177
Ensembl chr 4:28,348,362...28,375,791 		JBrowse link
plasma membrane copper ion transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cp ceruloplasmin TAS RGD PMID:12099680 RGD:727703 NCBI chr 2:102,439,433...102,498,075
Ensembl chr 2:102,439,624...102,498,075 		JBrowse link
G Slc31a1 solute carrier family 31 member 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:11734551), (PMID:17525160)		 UniProt
Ensembl
RGD		 PMID:11734551 PMID:17525160 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:75,814,744...75,844,241
Ensembl chr 5:75,814,743...75,844,228 		JBrowse link
regulation of copper ion transmembrane transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc31a2 solute carrier family 31 member 2 acts_upstream_of_or_within ISO (PMID:24167251) RGD PMID:24167251 NCBI chr 5:75,738,008...75,748,542
Ensembl chr 5:75,738,024...75,748,542 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20075
    cellular process 19154
      transmembrane transport 1716
        inorganic ion transmembrane transport 1016
          inorganic cation transmembrane transport 917
            copper ion transmembrane transport 10
              copper import into the mitochondrion 0
              copper ion export 3
              copper ion export from vacuole 0
              copper ion import across prospore membrane 0
              negative regulation of copper ion transmembrane transport 0
              plasma membrane copper ion transport + 4
              positive regulation of copper ion transmembrane transport 0
              regulation of copper ion transmembrane transport + 1
Path 2
Term Annotations click to browse term
  biological_process 20075
    localization 5699
      establishment of localization 5002
        transport 4697
          monoatomic ion transport 1383
            monoatomic cation transport 1173
              metal ion transport 990
                transition metal ion transport 128
                  copper ion transport 15
                    copper ion transmembrane transport 10
                      copper import into the mitochondrion 0
                      copper ion export 3
                      copper ion export from vacuole 0
                      copper ion import across prospore membrane 0
                      negative regulation of copper ion transmembrane transport 0
                      plasma membrane copper ion transport + 4
                      positive regulation of copper ion transmembrane transport 0
                      regulation of copper ion transmembrane transport + 1
paths to the root