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ONTOLOGY REPORT - ANNOTATIONS


Term:branched-chain amino acid biosynthetic process
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Accession:GO:0009082 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of amino acids containing a branched carbon skeleton, comprising isoleucine, leucine and valine.
Synonyms:exact_synonym: branched chain family amino acid anabolism;   branched chain family amino acid biosynthesis;   branched chain family amino acid biosynthetic process;   branched chain family amino acid formation;   branched chain family amino acid synthesis



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branched-chain amino acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAT1 branched chain amino acid transaminase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:61,364,154...61,500,827
Ensembl chr12:63,978,116...64,107,463
JBrowse link
G BCAT2 branched chain amino acid transaminase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr19:45,793,433...45,809,546
Ensembl chr19:54,945,157...54,962,887
JBrowse link
isoleucine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ILVBL ilvB acetolactate synthase like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:14,648,081...14,658,879
Ensembl chr19:15,632,614...15,643,414
JBrowse link
G SDS serine dehydratase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:110,995,164...111,006,668
Ensembl chr12:114,377,650...114,388,839
JBrowse link
G SDSL serine dehydratase like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:111,024,957...111,040,900
Ensembl chr12:114,406,738...114,422,347
JBrowse link
L-leucine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAT1 branched chain amino acid transaminase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:61,364,154...61,500,827
Ensembl chr12:63,978,116...64,107,463
JBrowse link
G BCAT2 branched chain amino acid transaminase 2 involved_in ISO
IEA
RGD
TreeGrafter
PMID:11733007 GO_REF:0000118 RGD:1582175 NCBI chr19:45,793,433...45,809,546
Ensembl chr19:54,945,157...54,962,887
JBrowse link
L-valine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAT1 branched chain amino acid transaminase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:61,364,154...61,500,827
Ensembl chr12:63,978,116...64,107,463
JBrowse link
G BCAT2 branched chain amino acid transaminase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:45,793,433...45,809,546
Ensembl chr19:54,945,157...54,962,887
JBrowse link
G ILVBL ilvB acetolactate synthase like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:14,648,081...14,658,879
Ensembl chr19:15,632,614...15,643,414
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19447
    cellular process 19000
      metabolic process 12941
        primary metabolic process 11364
          amino acid metabolic process 286
            branched-chain amino acid metabolic process 23
              branched-chain amino acid biosynthetic process 5
                D-leucine biosynthetic process 0
                L-leucine biosynthetic process + 2
                L-valine biosynthetic process 3
                isoleucine biosynthetic process + 3
Path 2
Term Annotations click to browse term
  biological_process 19447
    cellular process 19000
      metabolic process 12941
        small molecule metabolic process 1677
          organic acid metabolic process 909
            oxoacid metabolic process 900
              carboxylic acid metabolic process 880
                carboxylic acid biosynthetic process 298
                  branched-chain amino acid biosynthetic process 5
                    D-leucine biosynthetic process 0
                    L-leucine biosynthetic process + 2
                    L-valine biosynthetic process 3
                    isoleucine biosynthetic process + 3
paths to the root