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ONTOLOGY REPORT - ANNOTATIONS


Term:branched-chain amino acid metabolic process
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Accession:GO:0009081 term browser browse the term
Definition:The chemical reactions and pathways involving amino acids containing a branched carbon skeleton, comprising isoleucine, leucine and valine.
Synonyms:exact_synonym: branched chain family amino acid metabolism
 xref: MIPS_funcat:01.01.11


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branched-chain amino acid metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcat2 branched chain amino acid transaminase 2 JBrowse link 1 101,553,900 101,572,103 RGD:62398
RGD:1624291
branched-chain amino acid biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcat1 branched chain amino acid transaminase 1 JBrowse link 4 179,259,305 179,340,021 RGD:1600115
G Bcat2 branched chain amino acid transaminase 2 JBrowse link 1 101,553,900 101,572,103 RGD:1600115
branched-chain amino acid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcat1 branched chain amino acid transaminase 1 JBrowse link 4 179,259,305 179,340,021 RGD:1624291
G Bcat2 branched chain amino acid transaminase 2 JBrowse link 1 101,553,900 101,572,103 RGD:1582175
RGD:1624291
G Bckdha branched chain keto acid dehydrogenase E1 subunit alpha JBrowse link 1 82,423,291 82,452,094 RGD:631719
RGD:13792537
RGD:1600115
RGD:1624291
G Bckdhb branched chain keto acid dehydrogenase E1 subunit beta JBrowse link 8 91,464,229 91,656,134 RGD:1624291
RGD:13792537
RGD:1600115
G Bckdk branched chain ketoacid dehydrogenase kinase JBrowse link 1 199,351,628 199,356,299 RGD:68918
RGD:68712
isoleucine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acat1 acetyl-CoA acetyltransferase 1 JBrowse link 8 58,166,990 58,195,884 RGD:1624291
RGD:1600115
G Bcat2 branched chain amino acid transaminase 2 JBrowse link 1 101,553,900 101,572,103 RGD:1582175
RGD:1600115
RGD:1624291
isoleucine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcat2 branched chain amino acid transaminase 2 JBrowse link 1 101,553,900 101,572,103 RGD:1624291
leucine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcat1 branched chain amino acid transaminase 1 JBrowse link 4 179,259,305 179,340,021 RGD:13792537
G Bcat2 branched chain amino acid transaminase 2 JBrowse link 1 101,553,900 101,572,103 RGD:1582175
RGD:13792537
leucine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Auh AU RNA binding methylglutaconyl-CoA hydratase JBrowse link 17 12,310,178 12,405,224 RGD:1600115
G Hmgcl 3-hydroxy-3-methylglutaryl-CoA lyase JBrowse link 5 154,294,841 154,308,582 RGD:13792537
G Hmgcll1 3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1 JBrowse link 8 83,069,837 83,204,778 RGD:13792537
G Ivd isovaleryl-CoA dehydrogenase JBrowse link 3 110,669,355 110,689,789 RGD:1600115
RGD:8554099
G Mccc1 methylcrotonoyl-CoA carboxylase 1 JBrowse link 2 122,550,777 122,690,540 RGD:1600115
G Mccc2 methylcrotonoyl-CoA carboxylase 2 JBrowse link 2 30,175,017 30,246,028 RGD:1600115
RGD:13792537
leucine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcat2 branched chain amino acid transaminase 2 JBrowse link 1 101,553,900 101,572,103 RGD:1600115
RGD:1624291
G Dao D-amino-acid oxidase JBrowse link 12 48,353,691 48,373,647 RGD:1624291
G Ivd isovaleryl-CoA dehydrogenase JBrowse link 3 110,669,355 110,689,789 RGD:631718
valine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcat1 branched chain amino acid transaminase 1 JBrowse link 4 179,259,305 179,340,021 RGD:13792537
G Bcat2 branched chain amino acid transaminase 2 JBrowse link 1 101,553,900 101,572,103 RGD:13792537
valine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aldh6a1 aldehyde dehydrogenase 6 family, member A1 JBrowse link 6 108,146,552 108,167,185 RGD:1599052
RGD:13792537
RGD:1600115
RGD:1624291
G Hibadh 3-hydroxyisobutyrate dehydrogenase JBrowse link 4 82,604,369 82,702,429 RGD:1600115
RGD:13792537
RGD:1624291
G Hibch 3-hydroxyisobutyryl-CoA hydrolase JBrowse link 9 53,446,185 53,526,727 RGD:1600115
valine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aldh6a1 aldehyde dehydrogenase 6 family, member A1 JBrowse link 6 108,146,552 108,167,185 RGD:1599052
RGD:13792537
G Bcat2 branched chain amino acid transaminase 2 JBrowse link 1 101,553,900 101,572,103 RGD:1600115
RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18008
    metabolic process 10729
      primary metabolic process 9654
        cellular amino acid metabolic process 264
          branched-chain amino acid metabolic process 16
            branched-chain amino acid biosynthetic process + 2
            branched-chain amino acid catabolic process + 15
            isoleucine metabolic process + 2
            leucine metabolic process + 9
            valine metabolic process + 5
Path 2
Term Annotations click to browse term
  biological_process 18008
    metabolic process 10729
      cellular metabolic process 9809
        organic acid metabolic process 983
          oxoacid metabolic process 958
            carboxylic acid metabolic process 913
              cellular amino acid metabolic process 264
                branched-chain amino acid metabolic process 16
                  branched-chain amino acid biosynthetic process + 2
                  branched-chain amino acid catabolic process + 15
                  isoleucine metabolic process + 2
                  leucine metabolic process + 9
                  valine metabolic process + 5
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.