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ONTOLOGY REPORT - ANNOTATIONS


Term:pyruvate family amino acid metabolic process
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Accession:GO:0009078 term browser browse the term
Definition:The chemical reactions and pathways involving any amino acid that requires pyruvate for its synthesis, e.g. alanine.
Synonyms:exact_synonym: pyruvate family amino acid metabolism


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L-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt alanine--glyoxylate and serine--pyruvate aminotransferase involved_in ISO (PMID:17696873), (PMID:18492492), (PMID:22198249) UniProt PMID:17696873 PMID:18492492 PMID:22198249 NCBI chrNW_004955542:710,506...720,564
Ensembl chrNW_004955542:710,005...717,741
JBrowse link
L-alanine catabolic process, by transamination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt2 alanine--glyoxylate aminotransferase 2 involved_in ISO (PMID:20018850) BHF-UCL PMID:20018850 NCBI chrNW_004955426:20,102,368...20,142,596
Ensembl chrNW_004955426:20,101,620...20,142,620
JBrowse link
L-alanine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpt2 glutamic--pyruvic transaminase 2 involved_in ISO (PMID:11863375) UniProt PMID:11863375 NCBI chrNW_004955474:8,248,622...8,285,449
Ensembl chrNW_004955474:8,250,759...8,285,227
JBrowse link
L-leucine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcat2 branched chain amino acid transaminase 2 ISO RGD PMID:11733007 RGD:1582175 NCBI chrNW_004955559:1,785,253...1,796,838
Ensembl chrNW_004955559:1,785,253...1,797,899
JBrowse link
L-leucine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bckdk branched chain keto acid dehydrogenase kinase ISO RGD PMID:27472223 RGD:39131293 NCBI chrNW_004955493:7,940,358...7,946,317
Ensembl chrNW_004955493:7,940,315...7,946,317
JBrowse link
G Ivd isovaleryl-CoA dehydrogenase involved_in ISO (PMID:7640268)
PMID:6401713
UniProt
BHF-UCL
PMID:6401713 PMID:7640268 RGD:8554099 NCBI chrNW_004955416:7,327,557...7,341,533
Ensembl chrNW_004955416:7,327,557...7,346,027
JBrowse link
L-leucine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcat2 branched chain amino acid transaminase 2 acts_upstream_of_or_within ISO (PMID:17767905)
(PMID:14755340)
MGI PMID:14755340 PMID:17767905 NCBI chrNW_004955559:1,785,253...1,796,838
Ensembl chrNW_004955559:1,785,253...1,797,899
JBrowse link
G Dao D-amino acid oxidase acts_upstream_of_or_within ISO (PMID:15026304) MGI PMID:15026304 NCBI chrNW_004955455:10,095,597...10,127,244
Ensembl chrNW_004955455:10,095,300...10,127,666
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12571
    cellular process 12010
      metabolic process 7972
        primary metabolic process 7005
          amino acid metabolic process 209
            proteinogenic amino acid metabolic process 115
              pyruvate family amino acid metabolic process 7
                L-alanine metabolic process + 3
                L-leucine metabolic process + 4
                pyruvate family amino acid biosynthetic process + 1
                pyruvate family amino acid catabolic process + 4
Path 2
Term Annotations click to browse term
  biological_process 12571
    cellular process 12010
      metabolic process 7972
        small molecule metabolic process 1327
          organic acid metabolic process 685
            oxoacid metabolic process 679
              carboxylic acid metabolic process 671
                alpha-amino acid metabolic process 157
                  L-amino acid metabolic process 131
                    pyruvate family amino acid metabolic process 7
                      L-alanine metabolic process + 3
                      L-leucine metabolic process + 4
                      pyruvate family amino acid biosynthetic process + 1
                      pyruvate family amino acid catabolic process + 4
paths to the root