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ONTOLOGY REPORT - ANNOTATIONS

Term:antigen processing and presentation of peptide or polysaccharide antigen via MHC class II
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Accession:GO:0002504 term browser browse the term
Definition:The process in which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex.
Synonyms:exact_synonym: peptide or polysaccharide antigen processing and presentation of via MHC class II

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antigen processing and presentation of peptide or polysaccharide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC103221700 HLA class II histocompatibility antigen, DR beta 3 chain involved_in IEA UniProt GO_REF:0000043 NCBI chr17:39,471,058...39,484,265 JBrowse link
G LOC103247136 HLA class II histocompatibility antigen, DP alpha 1 chain involved_in IEA UniProt GO_REF:0000043
G LOC103247138 HLA class II histocompatibility antigen, DP beta 1 chain-like involved_in IEA UniProt GO_REF:0000043 NCBI chr17:38,949,347...38,964,673 JBrowse link
G LOC103247148 HLA class II histocompatibility antigen, DRB1 beta chain involved_in IEA UniProt GO_REF:0000043 NCBI chr17:39,556,020...39,564,488 JBrowse link
G LOC119618083 HLA class II histocompatibility antigen, DRB1 beta chain-like involved_in IEA UniProt GO_REF:0000043
G MHC-DMA HLA class II histocompatibility antigen, DM alpha chain involved_in IEA UniProt GO_REF:0000043 NCBI chr17:39,142,340...39,151,804
Ensembl chr17:39,142,395...39,146,252 		JBrowse link
G MHC-DMB major histocompatibility complex, class II, DM beta involved_in IEA UniProt GO_REF:0000043 NCBI chr17:39,153,744...39,161,029
Ensembl chr17:39,154,850...39,161,090 		JBrowse link
G MHC-DOA major histocompatibility complex, class II, DO alpha involved_in IEA UniProt GO_REF:0000043 NCBI chr17:39,084,785...39,090,477
Ensembl chr17:39,085,080...39,090,474 		JBrowse link
G MHC-DOB major histocompatibility complex, class II, DO beta involved_in IEA UniProt GO_REF:0000043 NCBI chr17:39,295,768...39,300,032
Ensembl chr17:39,295,828...39,300,819 		JBrowse link
G MHC-DPA1 major histocompatibility complex, class II, DP alpha 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr17:39,009,361...39,017,978 JBrowse link
G MHC-DPB1 major histocompatibility complex, class II, DP beta 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr17:38,996,329...39,007,097 JBrowse link
G MHC-DQA1 major histocompatibility complex, class II, DQ alpha 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr17:39,422,445...39,428,777
Ensembl chr17:39,420,134...39,428,871 		JBrowse link
G MHC-DQB1 major histocompatibility complex, class II, DQ beta 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr17:39,406,811...39,413,626
Ensembl chr17:39,406,762...39,413,277 		JBrowse link
G MHC-DRA major histocompatibility complex, class II, DR alpha involved_in IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 NCBI chr17:39,623,324...39,628,464
Ensembl chr17:39,622,402...39,629,261 		JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC103221700 HLA class II histocompatibility antigen, DR beta 3 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,471,058...39,484,265 JBrowse link
G LOC103247148 HLA class II histocompatibility antigen, DRB1 beta chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,556,020...39,564,488 JBrowse link
G LOC119618083 HLA class II histocompatibility antigen, DRB1 beta chain-like involved_in IEA Ensembl GO_REF:0000107
G MHC-DRA major histocompatibility complex, class II, DR alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,623,324...39,628,464
Ensembl chr17:39,622,402...39,629,261 		JBrowse link
antigen processing and presentation of exogenous peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD74 CD74 molecule acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:7679955), (PMID:8598040) MGI
Ensembl		 PMID:7679955 PMID:8598040 GO_REF:0000107 NCBI chr23:53,008,802...53,022,953
Ensembl chr23:53,009,394...53,022,923 		JBrowse link
G CTSE cathepsin E involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr25:23,318,421...23,333,885
Ensembl chr25:23,319,248...23,332,980 		JBrowse link
G CTSS cathepsin S involved_in IEA Ensembl GO_REF:0000107
G FCER1G Fc fragment of IgE receptor Ig acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:14643301) MGI
TreeGrafter		 PMID:14643301 GO_REF:0000118 NCBI chr20:2,763,412...2,767,774
Ensembl chr20:2,763,417...2,767,248 		JBrowse link
G IFI30 IFI30 lysosomal thiol reductase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:11701933) MGI
Ensembl		 PMID:11701933 GO_REF:0000107 NCBI chr 6:16,644,361...16,649,599
Ensembl chr 6:16,644,392...16,649,751 		JBrowse link
G LGMN legumain involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:70,456,463...70,500,345
Ensembl chr24:70,456,095...70,486,087 		JBrowse link
G LOC103221700 HLA class II histocompatibility antigen, DR beta 3 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,471,058...39,484,265 JBrowse link
G LOC103223672 low affinity immunoglobulin gamma Fc region receptor II-b acts_upstream_of_or_within ISO (PMID:14643301) MGI PMID:14643301 NCBI chr20:2,398,425...2,413,328 JBrowse link
G LOC103247148 HLA class II histocompatibility antigen, DRB1 beta chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,556,020...39,564,488 JBrowse link
G LOC119618083 HLA class II histocompatibility antigen, DRB1 beta chain-like involved_in IEA Ensembl GO_REF:0000107
G MHC-DMA HLA class II histocompatibility antigen, DM alpha chain acts_upstream_of_or_within ISO (PMID:8598040)
(PMID:8598041)
(PMID:11027433)
(PMID:11714799)		 MGI PMID:8598040 PMID:8598041 PMID:11027433 PMID:11714799 NCBI chr17:39,142,340...39,151,804
Ensembl chr17:39,142,395...39,146,252 		JBrowse link
G MHC-DMB major histocompatibility complex, class II, DM beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,153,744...39,161,029
Ensembl chr17:39,154,850...39,161,090 		JBrowse link
G MHC-DOA major histocompatibility complex, class II, DO alpha acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:9492004) MGI
Ensembl		 PMID:9492004 GO_REF:0000107 NCBI chr17:39,084,785...39,090,477
Ensembl chr17:39,085,080...39,090,474 		JBrowse link
G MHC-DPA1 major histocompatibility complex, class II, DP alpha 1 involved_in ISO (PMID:20356827) UniProt PMID:20356827 NCBI chr17:39,009,361...39,017,978 JBrowse link
G MHC-DPB1 major histocompatibility complex, class II, DP beta 1 involved_in ISO (PMID:20356827)
(PMID:32341563)		 UniProt PMID:20356827 PMID:32341563 NCBI chr17:38,996,329...39,007,097 JBrowse link
G MHC-DQA1 major histocompatibility complex, class II, DQ alpha 1 acts_upstream_of_or_within ISO (PMID:11027433), (PMID:11069069), (PMID:11714799), (PMID:7679955), (PMID:8598040), (PMID:8598041), (PMID:9432982), (PMID:9492004) MGI PMID:7679955 PMID:8598040 PMID:8598041 PMID:9432982 PMID:9492004 More... NCBI chr17:39,422,445...39,428,777
Ensembl chr17:39,420,134...39,428,871 		JBrowse link
G MHC-DQB1 major histocompatibility complex, class II, DQ beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,406,811...39,413,626
Ensembl chr17:39,406,762...39,413,277 		JBrowse link
G MHC-DRA major histocompatibility complex, class II, DR alpha acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:11027433), (PMID:11714799) MGI
Ensembl		 PMID:11027433 PMID:11714799 GO_REF:0000107 NCBI chr17:39,623,324...39,628,464
Ensembl chr17:39,622,402...39,629,261 		JBrowse link
G PIKFYVE phosphoinositide kinase, FYVE-type zinc finger containing involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:94,051,096...94,144,968
Ensembl chr10:94,056,923...94,145,268 		JBrowse link
G TRAF6 TNF receptor associated factor 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14499111) Ensembl
MGI		 PMID:14499111 GO_REF:0000107 NCBI chr 1:28,726,357...28,752,389
Ensembl chr 1:28,734,380...28,747,092 		JBrowse link
G UNC93B1 unc-93 homolog B1, TLR signaling regulator acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:16415873) MGI
Ensembl		 PMID:16415873 GO_REF:0000107 NCBI chr 1:6,537,198...6,549,457
Ensembl chr 1:6,537,273...6,549,450 		JBrowse link
antigen processing and presentation of peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MARCHF1 membrane associated ring-CH-type finger 1 involved_in ISO (PMID:17255932), (PMID:19917682)
(PMID:18389477)		 UniProt PMID:17255932 PMID:18389477 PMID:19917682 NCBI chr 7:109,978,620...110,783,623
Ensembl chr 7:109,979,056...110,063,661 		JBrowse link
G MARCHF8 membrane associated ring-CH-type finger 8 involved_in ISO (PMID:16785530) UniProt PMID:16785530 NCBI chr 9:41,157,445...41,294,277 JBrowse link
antigen processing and presentation of polysaccharide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARL8B ARF like GTPase 8B involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:41,192,458...41,247,048
Ensembl chr22:41,192,484...41,244,822 		JBrowse link
negative regulation of antigen processing and presentation of peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MHC-DOA major histocompatibility complex, class II, DO alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,084,785...39,090,477
Ensembl chr17:39,085,080...39,090,474 		JBrowse link
G MHC-DOB major histocompatibility complex, class II, DO beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,295,768...39,300,032
Ensembl chr17:39,295,828...39,300,819 		JBrowse link
negative regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G THBS1 thrombospondin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:43,410,693...43,427,816
Ensembl chr26:43,410,580...43,427,812 		JBrowse link
peptide antigen assembly with MHC class II protein complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC103221700 HLA class II histocompatibility antigen, DR beta 3 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,471,058...39,484,265 JBrowse link
G LOC103247148 HLA class II histocompatibility antigen, DRB1 beta chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,556,020...39,564,488 JBrowse link
G LOC119618083 HLA class II histocompatibility antigen, DRB1 beta chain-like involved_in IEA Ensembl GO_REF:0000107
G MHC-DMA HLA class II histocompatibility antigen, DM alpha chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,142,340...39,151,804
Ensembl chr17:39,142,395...39,146,252 		JBrowse link
G MHC-DMB major histocompatibility complex, class II, DM beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,153,744...39,161,029
Ensembl chr17:39,154,850...39,161,090 		JBrowse link
G MHC-DRA major histocompatibility complex, class II, DR alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,623,324...39,628,464
Ensembl chr17:39,622,402...39,629,261 		JBrowse link
positive regulation of antigen processing and presentation of peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PYCARD PYD and CARD domain containing involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:27,892,332...27,894,386
Ensembl chr 5:27,889,230...27,893,697 		JBrowse link
G TREM2 triggering receptor expressed on myeloid cells 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:30,965,091...30,999,073
Ensembl chr17:30,994,357...30,999,087 		JBrowse link
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