Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:tRNA nucleoside ribose methylation
go back to main search page
Accession:GO:0002128 term browser browse the term
Definition:The process that results in the modification of the sugar of a nucleoside in tRNA at the 2'O position.


show annotations for term's descendants           Sort by:
tRNA nucleoside ribose methylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ftsj1 FtsJ RNA 2'-O-methyltransferase 1 involved_in ISO (PMID:26310293) RGD PMID:26310293 NCBI chr  X:14,243,684...14,256,555
Ensembl chr  X:14,244,050...14,252,030 		JBrowse link
G Thada THADA, armadillo repeat containing involved_in ISO UniProtKB:Q03496 (PMID:35559166) RGD PMID:35559166 NCBI chr 6:10,183,942...10,488,007
Ensembl chr 6:10,183,982...10,487,159 		JBrowse link
wobble position ribose methylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ftsj1 FtsJ RNA 2'-O-methyltransferase 1 involved_in ISO (PMID:32558197) RGD PMID:32558197 NCBI chr  X:14,243,684...14,256,555
Ensembl chr  X:14,244,050...14,252,030 		JBrowse link
G Wdr6 WD repeat domain 6 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:32558197)		 UniProt
Ensembl
RGD		 PMID:32558197 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:109,268,079...109,274,504
Ensembl chr 8:109,268,079...109,274,499 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19692
    metabolic process 11455
      methylation 176
        macromolecule methylation 74
          RNA methylation 67
            tRNA methylation 37
              tRNA nucleoside ribose methylation 3
                tRNA guanine ribose methylation + 0
                wobble position ribose methylation + 2
Path 2
Term Annotations click to browse term
  biological_process 19692
    metabolic process 11455
      biosynthetic process 8267
        cellular biosynthetic process 7841
          macromolecule biosynthetic process 7210
            nucleic acid biosynthetic process 4203
              RNA biosynthetic process 4090
                RNA processing 954
                  tRNA processing 129
                    tRNA modification 89
                      tRNA methylation 37
                        tRNA nucleoside ribose methylation 3
                          tRNA guanine ribose methylation + 0
                          wobble position ribose methylation + 2
paths to the root