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Gene: Ftsj1 (FtsJ RNA 2'-O-methyltransferase 1) Rattus norvegicus
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Symbol: Ftsj1
Name: FtsJ RNA 2'-O-methyltransferase 1
Description: Predicted to have tRNA (cytosine-2'-O-)-methyltransferase activity and tRNA (guanosine-2'-O-)-methyltransferase activity. Predicted to be involved in cytoplasmic translation and tRNA methylation. Predicted to localize to the cytoplasm. Human ortholog(s) of this gene implicated in non-syndromic X-linked intellectual disability. Orthologous to human FTSJ1 (FtsJ RNA 2'-O-methyltransferase 1); INTERACTS WITH 2,4-dinitrotoluene; 2,6-dinitrotoluene; 4-amino-2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: MODEL
Also known as: Ftsj homolog 1; Ftsj homolog 1 (E. coli); FtsJ RNA methyltransferase homolog 1; FtsJ RNA methyltransferase homolog 1 (E. coli); LOC363450; putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; RGD1561061; similar to Ftsj homolog
Orthologs:
Homo sapiens (human) : FTSJ1 (FtsJ RNA 2'-O-methyltransferase 1)  HGNC  Alliance
Mus musculus (house mouse) : Ftsj1 (FtsJ RNA methyltransferase homolog 1 (E. coli))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ftsj1 (FtsJ RNA 2'-O-methyltransferase 1)
Pan paniscus (bonobo/pygmy chimpanzee) : FTSJ1 (FtsJ RNA 2'-O-methyltransferase 1)
Canis lupus familiaris (dog) : FTSJ1 (FtsJ RNA 2'-O-methyltransferase 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ftsj1 (FtsJ RNA 2'-O-methyltransferase 1)
Sus scrofa (pig) : FTSJ1 (FtsJ RNA 2'-O-methyltransferase 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0X14,993,685 - 15,006,010 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX14,994,016 - 15,002,074 (+)Ensembl
Rnor_5.0X15,777,547 - 15,796,124 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X26,275,183 - 26,282,960 (+)NCBIRGSC3.4rn4RGSC3.4
CeleraX14,329,203 - 14,341,462 (+)NCBICelera
Cytogenetic MapXq12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ftsj1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1561061
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.