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ONTOLOGY REPORT - ANNOTATIONS

Term:tRNA binding
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Accession:GO:0000049 term browser browse the term
Definition:Binding to a transfer RNA.
Synonyms:narrow_synonym: base pairing with tRNA
 alt_id: GO:0000946


show annotations for term's descendants           Sort by:
tRNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AARS1 alanyl-tRNA synthetase 1 enables ISO
IEA		 RGD
UniProt		 PMID:2040280 GO_REF:0000043 RGD:2302982 NCBI chr16:54,727,601...54,763,458
Ensembl chr16:70,086,735...70,121,902 		JBrowse link
G AARS2 alanyl-tRNA synthetase 2, mitochondrial enables IEA UniProt GO_REF:0000043 NCBI chr 6:43,895,255...43,909,347
Ensembl chr 6:45,176,773...45,191,505 		JBrowse link
G AIMP1 aminoacyl tRNA synthetase complex interacting multifunctional protein 1 enables IEA UniProt
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 NCBI chr 4:98,796,320...98,830,095
Ensembl chr 4:109,404,352...109,436,566 		JBrowse link
G ALKBH1 alkB homolog 1, histone H2A dioxygenase enables IEA Ensembl GO_REF:0000107 NCBI chr14:58,227,094...58,262,107
Ensembl chr14:77,428,033...77,462,905 		JBrowse link
G ALKBH8 alkB homolog 8, tRNA methyltransferase enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr11:102,390,687...102,456,357
Ensembl chr11:105,872,588...105,937,472 		JBrowse link
G C5H6orf52 chromosome 5 C6orf52 homolog enables IEA TreeGrafter GO_REF:0000118 NCBI chr 6:10,512,465...10,535,628
Ensembl chr 6:10,792,736...10,815,257 		JBrowse link
G CARS1 cysteinyl-tRNA synthetase 1 enables IEA Ensembl GO_REF:0000107 NCBI chr11:3,026,787...3,083,170
Ensembl chr11:3,053,551...3,109,509 		JBrowse link
G CTU2 cytosolic thiouridylase subunit 2 enables IEA InterPro GO_REF:0000002 NCBI chr16:69,419,811...69,428,500
Ensembl chr16:89,079,132...89,088,231 		JBrowse link
G DALRD3 DALR anticodon binding domain containing 3 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:48,940,126...48,945,717
Ensembl chr 3:50,021,669...50,024,522 		JBrowse link
G DTD1 D-aminoacyl-tRNA deacylase 1 enables IEA UniProt GO_REF:0000043 NCBI chr20:18,549,512...18,720,272
Ensembl chr20:18,499,564...18,670,699 		JBrowse link
G DUS2 dihydrouridine synthase 2 enables IEA InterPro GO_REF:0000002 NCBI chr16:48,355,186...48,450,121
Ensembl chr16:67,787,953...67,845,287 		JBrowse link
G EARS2 glutamyl-tRNA synthetase 2, mitochondrial enables IEA InterPro GO_REF:0000002 NCBI chr16:14,552,664...14,588,022
Ensembl chr16:23,774,123...23,809,873 		JBrowse link
G EEF1A1 eukaryotic translation elongation factor 1 alpha 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 6:71,342,291...71,346,033
Ensembl chr 6:74,629,688...74,633,754 		JBrowse link
G EEFSEC eukaryotic elongation factor, selenocysteine-tRNA specific enables IEA Ensembl GO_REF:0000107 NCBI chr 3:125,199,895...125,456,133
Ensembl chr 3:132,564,877...132,819,647 		JBrowse link
G EIF2A eukaryotic translation initiation factor 2A enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:147,564,293...147,601,939
Ensembl chr 3:155,137,410...155,175,492 		JBrowse link
G EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 enables ISO (MGI:5700304|PMID:16601681) UniProt PMID:16601681 MGI:5700304 NCBI chr15:18,871,867...18,973,380
Ensembl chr15:37,120,044...37,229,211 		JBrowse link
G EIF2S3 eukaryotic translation initiation factor 2 subunit gamma enables IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr  X:16,653,762...16,678,198
Ensembl chr  X:24,027,099...24,050,879 		JBrowse link
G EIF2S3B eukaryotic translation initiation factor 2 subunit gamma B enables IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr12:10,529,977...10,532,133
Ensembl chr12:10,796,985...10,813,243 		JBrowse link
G EIF5B eukaryotic translation initiation factor 5B enables IEA Ensembl GO_REF:0000107 NCBI chr2A:99,898,341...99,960,829
Ensembl chr2A:100,289,562...100,328,470 		JBrowse link
G ELP1 elongator acetyltransferase complex subunit 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 9:80,020,131...80,085,076
Ensembl chr 9:108,194,011...108,258,500 		JBrowse link
G ELP3 elongator acetyltransferase complex subunit 3 enables IEA UniProt GO_REF:0000043 NCBI chr 8:27,370,360...27,470,169
Ensembl chr 8:24,570,410...24,669,941 		JBrowse link
G ELP5 elongator acetyltransferase complex subunit 5 enables IEA TreeGrafter GO_REF:0000118 NCBI chr17:7,281,571...7,289,800 JBrowse link
G FARS2 phenylalanyl-tRNA synthetase 2, mitochondrial enables IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chr 6:5,096,453...5,608,362
Ensembl chr 6:5,387,291...5,792,749 		JBrowse link
G FARSA phenylalanyl-tRNA synthetase subunit alpha enables IEA InterPro GO_REF:0000002 NCBI chr19:12,484,607...12,496,160
Ensembl chr19:13,227,193...13,238,244 		JBrowse link
G GTPBP1 GTP binding protein 1 enables IEA Ensembl GO_REF:0000107 NCBI chr22:19,621,159...19,648,848
Ensembl chr22:37,438,626...37,462,933 		JBrowse link
G GTSF1 gametocyte specific factor 1 enables IEA Ensembl GO_REF:0000107 NCBI chr12:34,273,008...34,290,755
Ensembl chr12:35,001,805...35,018,134 		JBrowse link
G HSD17B10 hydroxysteroid 17-beta dehydrogenase 10 enables IEA Ensembl GO_REF:0000107 NCBI chr  X:45,645,849...45,649,039
Ensembl chr  X:53,754,164...53,757,643 		JBrowse link
G IARS1 isoleucyl-tRNA synthetase 1 enables IEA InterPro GO_REF:0000002 NCBI chr 9:63,332,030...63,415,567
Ensembl chr 9:91,406,008...91,489,167 		JBrowse link
G IARS2 isoleucyl-tRNA synthetase 2, mitochondrial enables IEA InterPro GO_REF:0000002 NCBI chr 1:195,666,995...195,720,661
Ensembl chr 1:200,703,711...200,757,648 		JBrowse link
G IFIT5 interferon induced protein with tetratricopeptide repeats 5 enables IEA Ensembl GO_REF:0000107 NCBI chr10:86,139,816...86,146,244
Ensembl chr10:89,678,703...89,685,839 		JBrowse link
G IGHMBP2 immunoglobulin mu DNA binding protein 2 enables IEA Ensembl GO_REF:0000107 NCBI chr11:63,991,285...64,028,430
Ensembl chr11:67,294,195...67,331,659 		JBrowse link
G KARS1 lysyl-tRNA synthetase 1 enables ISO
IEA		 RGD
TreeGrafter		 PMID:7082655 PMID:7372681 GO_REF:0000118 RGD:2303393 RGD:2303394 NCBI chr16:56,196,867...56,216,909
Ensembl chr16:75,545,002...75,565,043 		JBrowse link
G KDM8 lysine demethylase 8 enables IEA TreeGrafter GO_REF:0000118 Ensembl chr16:27,577,230...27,595,164 JBrowse link
G LOC100970534 elongator complex protein 5 enables IEA TreeGrafter GO_REF:0000118 NCBI chr19:15,151,613...15,153,861 JBrowse link
G LOC100973697 small ribosomal subunit protein eS10 ISO RGD PMID:6873282 RGD:11040685 NCBI chr 6:33,982,735...33,991,470 JBrowse link
G METTL1 methyltransferase 1, tRNA methylguanosine enables IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr12:31,154,374...31,158,175
Ensembl chr12:31,414,941...31,418,588 		JBrowse link
G MRPS27 mitochondrial ribosomal protein S27 enables IEA Ensembl GO_REF:0000107 NCBI chr 5:42,992,341...43,092,816
Ensembl chr 5:43,591,087...43,692,778 		JBrowse link
G MTRES1 mitochondrial transcription rescue factor 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 6:104,839,280...104,862,854
Ensembl chr 6:108,709,803...108,729,976 		JBrowse link
G MTRFR mitochondrial translation release factor in rescue enables IEA Ensembl GO_REF:0000107 NCBI chr12:120,831,264...120,856,215
Ensembl chr12:125,064,881...125,089,615 		JBrowse link
G NAT10 N-acetyltransferase 10 enables IEA TreeGrafter GO_REF:0000118 NCBI chr11:34,082,304...34,127,793
Ensembl chr11:33,960,739...34,002,069 		JBrowse link
G NEMF nuclear export mediator factor enables IEA TreeGrafter GO_REF:0000118 NCBI chr14:30,372,390...30,441,660
Ensembl chr14:48,679,252...48,748,258 		JBrowse link
G NSUN2 NOP2/Sun RNA methyltransferase 2 enables IEA UniProt
TreeGrafter		 GO_REF:0000043 GO_REF:0000118 NCBI chr 5:6,921,073...6,953,622
Ensembl chr 5:6,596,414...6,629,121 		JBrowse link
G NSUN6 NOP2/Sun RNA methyltransferase 6 enables IEA Ensembl GO_REF:0000107 NCBI chr10:18,864,484...18,978,297
Ensembl chr10:19,199,642...19,304,089 		JBrowse link
G PSTK phosphoseryl-tRNA kinase enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr10:119,537,146...119,547,343
Ensembl chr10:123,810,680...123,817,655 		JBrowse link
G PTCD1 pentatricopeptide repeat domain 1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:91,392,616...91,411,904
Ensembl chr 7:104,894,369...104,913,860 		JBrowse link
G PUS1 pseudouridine synthase 1 enables IEA Ensembl GO_REF:0000107 NCBI chr12:129,583,040...129,598,328
Ensembl chr12:134,011,932...134,027,160 		JBrowse link
G QTRT2 queuine tRNA-ribosyltransferase accessory subunit 2 enables IEA Ensembl GO_REF:0000107 NCBI chr 3:111,194,231...111,225,895
Ensembl chr 3:118,114,739...118,146,349 		JBrowse link
G RARS1 arginyl-tRNA synthetase 1 ISO RGD PMID:7082655 RGD:2303394 NCBI chr 5:163,851,644...163,884,787
Ensembl chr 5:170,616,819...170,649,655 		JBrowse link
G RPL6 ribosomal protein L6 ISO RGD PMID:7118887 RGD:11039446 NCBI chr12:110,002,667...110,008,899
Ensembl chr12:113,398,795...113,403,186 		JBrowse link
G RPUSD4 RNA pseudouridine synthase D4 enables IEA Ensembl GO_REF:0000107 NCBI chr11:120,997,815...121,025,558
Ensembl chr11:124,926,910...124,936,621 		JBrowse link
G SARS1 seryl-tRNA synthetase 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 1:111,590,850...111,615,068
Ensembl chr 1:110,755,054...110,779,704 		JBrowse link
G SARS2 seryl-tRNA synthetase 2, mitochondrial enables IEA TreeGrafter GO_REF:0000118 NCBI chr19:36,015,983...36,037,404
Ensembl chr19:44,565,214...44,568,594
Ensembl chr19:44,565,214...44,568,594
Ensembl chr19:44,565,214...44,568,594 		JBrowse link
G SEPSECS Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase enables IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:19,517,552...19,558,454
Ensembl chr 4:24,802,260...24,842,816 		JBrowse link
G SLFN11 schlafen family member 11 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr17:21,412,361...21,436,650
Ensembl chr17:21,715,569...21,727,019 		JBrowse link
G SLFN13 schlafen family member 13 enables IEA TreeGrafter GO_REF:0000118 NCBI chr17:21,343,027...21,354,521
Ensembl chr17:21,641,078...21,646,159 		JBrowse link
G SSB small RNA binding exonuclease protection factor La enables IEA Ensembl GO_REF:0000107 NCBI chr2B:57,071,158...57,084,428
Ensembl chr2B:174,536,382...174,549,604 		JBrowse link
G TERT telomerase reverse transcriptase enables IEA Ensembl GO_REF:0000107 Ensembl chr 5:1,300,960...1,338,872 JBrowse link
G TRMT10A tRNA methyltransferase 10A enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:91,970,440...91,987,722
Ensembl chr 4:102,631,501...102,648,454 		JBrowse link
G TRMT10B tRNA methyltransferase 10B enables IEA TreeGrafter GO_REF:0000118 NCBI chr 9:37,602,757...37,628,693
Ensembl chr 9:38,526,496...38,551,902 		JBrowse link
G TRMT10C tRNA methyltransferase 10C, mitochondrial RNase P subunit enables ISO (PMID:29040705) UniProt PMID:29040705 NCBI chr 3:98,671,176...98,675,743 JBrowse link
G TRMT11 tRNA methyltransferase 11 homolog enables IEA UniProt GO_REF:0000043 NCBI chr 6:123,770,783...123,825,179
Ensembl chr 6:127,888,697...127,941,505 		JBrowse link
G TRMT1L tRNA methyltransferase 1 like enables IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr 1:160,642,659...160,681,709
Ensembl chr 1:164,795,113...164,833,940 		JBrowse link
G TRMT9B tRNA methyltransferase 9B (putative) enables IEA TreeGrafter GO_REF:0000118 NCBI chr 8:12,150,772...12,228,454
Ensembl chr 8:8,904,500...8,983,939 		JBrowse link
G TRMU tRNA mitochondrial 2-thiouridylase enables IEA UniProt GO_REF:0000043 Ensembl chr22:45,399,506...45,421,439 JBrowse link
G TRNAU1AP tRNA selenocysteine 1 associated protein 1 enables ISO
IEA		 tRNASec (human) RGD
TreeGrafter		 PMID:10606267 GO_REF:0000118 RGD:633938 NCBI chr 1:27,820,419...27,847,729
Ensembl chr 1:28,854,760...28,881,721 		JBrowse link
G TRNT1 tRNA nucleotidyl transferase 1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:3,069,858...3,095,006
Ensembl chr 3:3,173,943...3,194,672 		JBrowse link
G TYW5 tRNA-yW synthesizing protein 5 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr2B:87,177,858...87,204,411
Ensembl chr2B:205,338,762...205,362,872 		JBrowse link
G WDR6 WD repeat domain 6 enables IEA Ensembl GO_REF:0000107 NCBI chr 3:48,931,669...48,940,591
Ensembl chr 3:50,013,708...50,021,367 		JBrowse link
G XPO5 exportin 5 enables IEA Ensembl GO_REF:0000107 NCBI chr 6:43,114,408...43,168,113
Ensembl chr 6:44,406,765...44,458,029 		JBrowse link
G XPOT exportin for tRNA enables IEA UniProt
TreeGrafter
InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr12:24,469,893...24,516,694
Ensembl chr12:24,969,881...25,016,517 		JBrowse link
G YARS1 tyrosyl-tRNA synthetase 1 enables IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 NCBI chr 1:32,068,202...32,108,664
Ensembl chr 1:33,232,905...33,294,558 		JBrowse link
G YARS2 tyrosyl-tRNA synthetase 2 enables IEA Ensembl GO_REF:0000107 NCBI chr12:53,463,086...53,493,352
Ensembl chr12:56,065,505...56,076,026 		JBrowse link
G YRDC yrdC N6-threonylcarbamoyltransferase domain containing enables IEA TreeGrafter GO_REF:0000118 NCBI chr 1:37,077,653...37,082,929 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 17494
    binding 16143
      organic cyclic compound binding 5205
        nucleic acid binding 3268
          RNA binding 1169
            tRNA binding 73
              methionyl-initiator methionine tRNA binding 0
              tRNA modification guide activity + 0
paths to the root