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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:pericardium disease
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Accession:DOID:0050829 term browser browse the term
Definition:A cardiovascular system disease that is located_in the fibrous sac surrounding the heart.
Synonyms:primary_id: RDO:9002745
For additional species annotation, visit the Alliance of Genome Resources.


show annotations for term's descendants           Sort by:
 
cardiac tamponade term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plat plasminogen activator, tissue type ISO CTD Direct Evidence: marker/mechanism CTD PMID:9633741 NCBI chr16:74,098,263...74,122,897
Ensembl chr16:74,098,260...74,122,889
JBrowse link
pericardial effusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il10 interleukin 10 severity ISO RGD PMID:16360340 RGD:1598622 NCBI chr13:47,738,933...47,743,392
Ensembl chr13:47,739,526...47,743,392
JBrowse link
G Plat plasminogen activator, tissue type ISO CTD Direct Evidence: marker/mechanism CTD PMID:9633741 NCBI chr16:74,098,263...74,122,897
Ensembl chr16:74,098,260...74,122,889
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20801906 NCBI chr13:67,351,230...67,356,920
Ensembl chr13:67,351,087...67,359,335
JBrowse link
G Serpina11 serpin family A member 11 ISO ClinVar Annotator: match by term: Pericardial effusion ClinVar PMID:25741868 NCBI chr 6:127,647,180...127,656,603
Ensembl chr 6:127,647,184...127,656,603
JBrowse link
pericarditis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il10rb interleukin 10 receptor subunit beta ISO ClinVar Annotator: match by term: Pericarditis ClinVar PMID:30311386 NCBI chr11:31,560,301...31,582,457
Ensembl chr11:31,560,530...31,582,457
JBrowse link
G Mefv MEFV innate immuity regulator, pyrin ISO ClinVar Annotator: match by term: Pericarditis ClinVar PMID:11464238, PMID:12124996, PMID:16100353, PMID:16255051, PMID:17665427, PMID:19026119, PMID:19934105, PMID:20721559, PMID:21228398, PMID:22019805, PMID:22566169, PMID:22614345, PMID:22903357, PMID:23325590, PMID:25821352, PMID:26299986, PMID:28492532, PMID:29047407, PMID:29178647, PMID:29735907, PMID:30311386 NCBI chr10:12,045,813...12,056,229
Ensembl chr10:12,046,541...12,056,311
JBrowse link
G Prg4 proteoglycan 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:10545950, PMID:16429407 RGD:1580712 NCBI chr13:67,672,588...67,688,902
Ensembl chr13:67,672,878...67,688,477
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 16023
    disease of anatomical entity 15278
      cardiovascular system disease 4424
        heart disease 2667
          pericardium disease 7
            benign pericardial teratoma 0
            pericardial effusion + 4
            pericarditis + 3
            pericardium cancer + 0
            pericardium leiomyoma 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.