ONTOLOGY REPORT - ANNOTATIONS

Term:pigment cell differentiation
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Accession:GO:0050931 term browser browse the term
Definition:The process in which a relatively unspecialized cell acquires the specialized features of a pigmented cell, such as a melanocyte.
Comment:Note that the chromatophore mentioned here is distinct from the pigment bearing structure found in certain photosynthetic bacteria and cyanobacteria. It is also different from the plant chromoplast, which is also sometimes called a chromatophore.
Synonyms:exact_synonym: chromatophore differentiation;   pigmented cell differentiation
 alt_id: GO:0043357;   GO:0043358

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endosome to melanosome transport term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Ap1m1 adaptor-related protein complex 1, mu 1 subunit GBrowse link ISO 16 18,009,300 18,024,765 RGD:1624291 RGD
G Ap1m1 adaptor-related protein complex 1, mu 1 subunit GBrowse link IEA 16 18,009,300 18,024,765 RGD:1600115 ENSEMBL
G Bloc1s3 biogenesis of lysosomal organelles complex-1, subunit 3 GBrowse link IEA 1 78,859,459 78,861,218 RGD:1600115 ENSEMBL
G Bloc1s3 biogenesis of lysosomal organelles complex-1, subunit 3 GBrowse link ISO 1 78,859,459 78,861,218 RGD:1624291 RGD
G Bloc1s5 biogenesis of lysosomal organelles complex-1, subunit 5, muted GBrowse link ISO 17 32,240,737 32,266,040 RGD:1624291 RGD
G Bloc1s6 biogenesis of lysosomal organelles complex-1, subunit 6, pallidin GBrowse link ISO 3 109,706,842 109,716,971 RGD:1624291 RGD
G Bloc1s6 biogenesis of lysosomal organelles complex-1, subunit 6, pallidin GBrowse link ISS 3 109,706,842 109,716,971 RGD:1600115 UniProtKB
erythrophore differentiation term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Sod2 superoxide dismutase 2, mitochondrial GBrowse link ISO 1 41,862,997 41,870,327 RGD:1624291 RGD
G Sod2 superoxide dismutase 2, mitochondrial GBrowse link IEA 1 41,862,997 41,870,327 RGD:1600115 ENSEMBL
iridophore differentiation term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Foxd1 forkhead box D1 GBrowse link IBA 2 28,944,067 28,945,665 RGD:1600115 RefGenome
G Foxd2 forkhead box D2 GBrowse link IBA 5 135,269,120 135,270,809 RGD:1600115 RefGenome
G Foxd3 forkhead box D3 GBrowse link IBA 5 120,334,468 120,335,794 RGD:1600115 RefGenome
G Foxd4 forkhead box D4 GBrowse link IBA 1 228,348,202 228,349,654 RGD:1600115 RefGenome
melanocyte differentiation term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Bcl2 B-cell CLL/lymphoma 2 GBrowse link ISO 13 12,730,736 12,905,108 RGD:1624291 RGD
G Bcl2 B-cell CLL/lymphoma 2 GBrowse link ISO 13 12,730,736 12,905,108 RGD:1624291 RGD
G Bcl2 B-cell CLL/lymphoma 2 GBrowse link ISO 13 12,730,736 12,905,108 RGD:1624291 RGD
G Bcl2 B-cell CLL/lymphoma 2 GBrowse link IEA 13 12,730,736 12,905,108 RGD:1600115 ENSEMBL
G Bloc1s6 biogenesis of lysosomal organelles complex-1, subunit 6, pallidin GBrowse link ISO 3 109,706,842 109,716,971 RGD:1624291 RGD
G Bloc1s6 biogenesis of lysosomal organelles complex-1, subunit 6, pallidin GBrowse link IEA 3 109,706,842 109,716,971 RGD:1600115 ENSEMBL
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 GBrowse link ISO X 90,301,067 90,305,762 RGD:1624291 RGD
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 GBrowse link ISO X 90,301,067 90,305,762 RGD:1624291 RGD
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 GBrowse link ISS X 90,301,067 90,305,762 RGD:1600115 UniProtKB
G Edn3 endothelin 3 GBrowse link ISO 3 166,491,368 166,514,051 RGD:1624291 RGD
G Edn3 endothelin 3 GBrowse link IEA 3 166,491,368 166,514,051 RGD:1600115 ENSEMBL
G Ednrb endothelin receptor type B GBrowse link IDA 15 87,893,141 87,898,700 RGD:628459 RGD
G Ednrb endothelin receptor type B GBrowse link ISO 15 87,893,141 87,898,700 RGD:1624291 RGD
G Ednrb endothelin receptor type B GBrowse link ISO 15 87,893,141 87,898,700 RGD:1624291 RGD
G Foxd1 forkhead box D1 GBrowse link IBA 2 28,944,067 28,945,665 RGD:1600115 RefGenome
G Foxd2 forkhead box D2 GBrowse link IBA 5 135,269,120 135,270,809 RGD:1600115 RefGenome
G Foxd3 forkhead box D3 GBrowse link IBA 5 120,334,468 120,335,794 RGD:1600115 RefGenome
G Foxd4 forkhead box D4 GBrowse link IBA 1 228,348,202 228,349,654 RGD:1600115 RefGenome
G Gli3 GLI family zinc finger 3 GBrowse link IMP 17 57,594,102 57,867,710 RGD:2290270 MGI
G Gli3 GLI family zinc finger 3 GBrowse link ISO 17 57,594,102 57,867,710 RGD:1624291 RGD
G Hps1 Hermansky-Pudlak syndrome 1 homolog (human) GBrowse link ISO 1 248,109,643 248,134,450 RGD:1624291 RGD
G Hps4 Hermansky-Pudlak syndrome 4 GBrowse link ISO 19 14,326,654 14,355,770 RGD:1624291 RGD
G Hps4 Hermansky-Pudlak syndrome 4 GBrowse link IEA 19 14,326,654 14,355,770 RGD:1600115 ENSEMBL
G Hps6 Hermansky-Pudlak syndrome 6 GBrowse link ISO 1 251,226,344 251,228,953 RGD:1624291 RGD
G Hps6 Hermansky-Pudlak syndrome 6 GBrowse link IEA 1 251,226,344 251,228,953 RGD:1600115 ENSEMBL
G Kit v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog GBrowse link ISO 14 34,906,043 34,984,819 RGD:1624291 RGD
G Kit v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog GBrowse link IEA 14 34,906,043 34,984,819 RGD:1600115 ENSEMBL
G LOC100365773 pink-eyed dilution-like IEA RGD:1600115 ENSEMBL
G LOC308670 Dnmt3a-ps2 pseudogene GBrowse link IEA 1 107,695,006 107,705,733 RGD:1600115 ENSEMBL
G Mef2c myocyte enhancer factor 2C GBrowse link ISO 2 12,331,078 12,346,520 RGD:1624291 RGD
G Mef2c myocyte enhancer factor 2C GBrowse link ISS 2 12,331,078 12,346,520 UniProtKB
G Mef2c myocyte enhancer factor 2C GBrowse link IEA 2 12,331,078 12,346,520 RGD:1600115 ENSEMBL
G Mitf microphthalmia-associated transcription factor GBrowse link ISO 4 132,534,187 132,745,669 RGD:1624291 RGD
G Mitf microphthalmia-associated transcription factor GBrowse link ISO 4 132,534,187 132,745,669 RGD:1624291 RGD
G Mitf microphthalmia-associated transcription factor GBrowse link IEA 4 132,534,187 132,745,669 RGD:1600115 ENSEMBL
G Mlph melanophilin GBrowse link ISO 9 90,113,308 90,149,114 RGD:1624291 RGD
G Mlph melanophilin GBrowse link ISO 9 90,113,308 90,149,114 RGD:1624291 RGD
G Mlph melanophilin GBrowse link IEA 9 90,113,308 90,149,114 RGD:1600115 ENSEMBL
G Mreg melanoregulin GBrowse link ISO 9 71,303,627 71,357,985 RGD:1624291 RGD
G Mreg melanoregulin GBrowse link ISO 9 71,303,627 71,357,985 RGD:1624291 RGD
G Mreg melanoregulin GBrowse link IEA 9 71,303,627 71,357,985 RGD:1600115 ENSEMBL
G Myo5a myosin VA GBrowse link ISO 8 79,909,224 80,027,290 RGD:1624291 RGD
G Myo5a myosin VA GBrowse link ISO 8 79,909,224 80,027,290 RGD:1624291 RGD
G Myo5a myosin VA GBrowse link ISO 8 79,909,224 80,027,290 RGD:1624291 RGD
G Rab27a RAB27A, member RAS oncogene family GBrowse link ISO 8 77,798,830 77,861,090 RGD:1624291 RGD
G Rab27a RAB27A, member RAS oncogene family GBrowse link ISO 8 77,798,830 77,861,090 RGD:1624291 RGD
G Rab27a RAB27A, member RAS oncogene family GBrowse link IEA 8 77,798,830 77,861,090 RGD:1600115 ENSEMBL
G Sox10 SRY (sex determining region Y)-box 10 GBrowse link ISO 7 117,138,694 117,149,939 RGD:1624291 RGD
G Sox10 SRY (sex determining region Y)-box 10 GBrowse link IEA 7 117,138,694 117,149,939 RGD:1600115 ENSEMBL
G Tyrp1 tyrosinase-related protein 1 GBrowse link ISO 5 99,518,306 99,537,289 RGD:1624291 RGD
G Tyrp1 tyrosinase-related protein 1 GBrowse link IEA 5 99,518,306 99,537,289 RGD:1600115 ENSEMBL
positive regulation of melanocyte differentiation term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Adamts9 ADAM metallopeptidase with thrombospondin type 1 motif, 9 GBrowse link ISO 4 126,996,604 127,198,909 RGD:1624291 RGD
G Adamts9 ADAM metallopeptidase with thrombospondin type 1 motif, 9 GBrowse link IEA 4 126,996,604 127,198,909 RGD:1600115 ENSEMBL
G Bcl2 B-cell CLL/lymphoma 2 GBrowse link ISO 13 12,730,736 12,905,108 RGD:1624291 RGD
G Bcl2 B-cell CLL/lymphoma 2 GBrowse link IEA 13 12,730,736 12,905,108 RGD:1600115 ENSEMBL
G Kitlg KIT ligand GBrowse link ISO 7 37,714,157 37,795,722 RGD:1624291 RGD
G Kitlg KIT ligand GBrowse link IEA 7 37,714,157 37,795,722 RGD:1600115 ENSEMBL
positive regulation of pigment cell differentiation term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Bloc1s5 biogenesis of lysosomal organelles complex-1, subunit 5, muted GBrowse link ISO 17 32,240,737 32,266,040 RGD:1624291 RGD
G Bloc1s6 biogenesis of lysosomal organelles complex-1, subunit 6, pallidin GBrowse link ISO 3 109,706,842 109,716,971 RGD:1624291 RGD
G Bloc1s6 biogenesis of lysosomal organelles complex-1, subunit 6, pallidin GBrowse link ISS 3 109,706,842 109,716,971 RGD:1600115 UniProtKB
regulation of melanocyte differentiation term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Gna11 guanine nucleotide binding protein, alpha 11 GBrowse link ISO 7 9,636,748 9,662,492 RGD:1624291 RGD
G Gna11 guanine nucleotide binding protein, alpha 11 GBrowse link IEA 7 9,636,748 9,662,492 RGD:1600115 ENSEMBL
G Gnaq guanine nucleotide binding protein (G protein), q polypeptide GBrowse link ISO 1 219,520,998 219,764,401 RGD:1624291 RGD
G Gnaq guanine nucleotide binding protein (G protein), q polypeptide GBrowse link IEA 1 219,520,998 219,764,401 RGD:1600115 ENSEMBL
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 135967
    developmental process 29431
      developmental pigmentation 117
        pigment cell differentiation 77
          cyanophore differentiation + 0
          erythrophore differentiation + 2
          iridophore differentiation + 4
          leucophore differentiation + 0
          melanocyte differentiation + 61
          negative regulation of pigment cell differentiation + 0
          pigment cell development 0
          pigment granule maturation + 7
          positive regulation of pigment cell differentiation + 9
          regulation of pigment cell differentiation + 13
          xanthophore differentiation + 0
Path 2
Term Annotations click to browse term
  biological_process 135967
    single-organism process 88399
      single-organism cellular process 56334
        cellular developmental process 11096
          cell differentiation 10491
            pigment cell differentiation 77
              cyanophore differentiation + 0
              erythrophore differentiation + 2
              iridophore differentiation + 4
              leucophore differentiation + 0
              melanocyte differentiation + 61
              negative regulation of pigment cell differentiation + 0
              pigment cell development 0
              pigment granule maturation + 7
              positive regulation of pigment cell differentiation + 9
              regulation of pigment cell differentiation + 13
              xanthophore differentiation + 0
paths to the root

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