Lrmda (leucine rich melanocyte differentiation associated) - Rat Genome Database

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Gene: Lrmda (leucine rich melanocyte differentiation associated) Rattus norvegicus
Analyze
Symbol: Lrmda
Name: leucine rich melanocyte differentiation associated
RGD ID: 1596707
Description: Predicted to be involved in melanocyte differentiation. Human ortholog(s) of this gene implicated in oculocutaneous albinism type VII. Orthologous to human LRMDA (leucine rich melanocyte differentiation associated); INTERACTS WITH acetamide; bisphenol A; tetrachloromethane.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: hypothetical protein LOC681383; leucine-rich repeat-containing protein C10orf11 homolog; LOC681383; similar to Protein C10orf11 homolog; uncharacterized protein LOC681383
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8151,275,139 - 2,334,153 (-)NCBIGRCr8
mRatBN7.2151,223,098 - 2,284,764 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl151,225,710 - 2,284,749 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx151,232,699 - 2,292,182 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0152,619,324 - 3,678,610 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0151,231,451 - 2,290,959 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0151,269,869 - 2,346,246 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0151,252,267 - 2,328,752 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4151,191,953 - 2,324,521 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera152,295,853 - 3,337,686 (+)NCBICelera
Cytogenetic Map15p16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
2. GOA pipeline RGD automated data pipeline
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:23395477  


Genomics

Comparative Map Data
Lrmda
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8151,275,139 - 2,334,153 (-)NCBIGRCr8
mRatBN7.2151,223,098 - 2,284,764 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl151,225,710 - 2,284,749 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx151,232,699 - 2,292,182 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0152,619,324 - 3,678,610 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0151,231,451 - 2,290,959 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0151,269,869 - 2,346,246 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0151,252,267 - 2,328,752 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4151,191,953 - 2,324,521 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera152,295,853 - 3,337,686 (+)NCBICelera
Cytogenetic Map15p16NCBI
LRMDA
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381075,431,624 - 76,560,168 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1075,431,624 - 76,560,168 (+)EnsemblGRCh38hg38GRCh38
GRCh371077,191,382 - 78,319,926 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361077,212,525 - 77,987,136 (+)NCBINCBI36Build 36hg18NCBI36
Build 341077,212,524 - 77,987,130NCBI
Celera1070,831,521 - 71,605,978 (+)NCBICelera
Cytogenetic Map10q22.2-q22.3NCBI
HuRef1071,540,196 - 72,314,718 (+)NCBIHuRef
CHM1_11077,824,689 - 78,599,701 (+)NCBICHM1_1
T2T-CHM13v2.01076,305,674 - 77,428,762 (+)NCBIT2T-CHM13v2.0
Lrmda
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391422,069,567 - 23,106,161 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1422,069,780 - 23,106,153 (+)EnsemblGRCm39 Ensembl
GRCm381422,019,504 - 23,056,093 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1422,019,712 - 23,056,085 (+)EnsemblGRCm38mm10GRCm38
MGSCv371422,838,934 - 23,875,310 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361420,808,264 - 21,844,637 (+)NCBIMGSCv36mm8
Celera1418,400,891 - 19,435,571 (+)NCBICelera
Cytogenetic Map14A3NCBI
cM Map1412.03NCBI
Lrmda
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495543715,678,397 - 16,173,214 (-)NCBIChiLan1.0ChiLan1.0
LRMDA
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2887,574,802 - 88,712,386 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11087,591,299 - 88,715,871 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01071,957,984 - 73,085,285 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11074,974,055 - 75,747,123 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1074,630,828 - 75,747,045 (+)Ensemblpanpan1.1panPan2
LRMDA
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1425,610,656 - 26,636,351 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl425,610,174 - 26,633,127 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha425,745,268 - 26,759,681 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0425,893,144 - 26,914,311 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl425,867,243 - 26,914,274 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1425,796,333 - 26,809,674 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0425,988,655 - 27,009,195 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0426,345,031 - 27,359,889 (+)NCBIUU_Cfam_GSD_1.0
Lrmda
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721354,465,289 - 55,453,463 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365212,959,844 - 3,946,191 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365212,959,770 - 3,637,431 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LRMDA
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1477,957,851 - 79,051,455 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11477,957,833 - 79,051,540 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21484,055,057 - 84,380,892 (+)NCBISscrofa10.2Sscrofa10.2susScr3
LRMDA
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1954,838,434 - 55,976,189 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604815,279,112 - 16,433,660 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Lrmda
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247548,781,687 - 9,892,041 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247548,781,356 - 9,892,121 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Lrmda
4850 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1354657Despr13Despair related QTL 130.0022locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)15129912054Rat
8552920Pigfal8Plasma insulin-like growth factor 1 level QTL 83blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)15134723002Rat
8694361Abfw6Abdominal fat weight QTL 610.20.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)15134723002Rat
9589149Insul29Insulin level QTL 299.060.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)15134723002Rat
731170Pur3Proteinuria QTL 32.30.0005urine protein amount (VT:0005160)urine protein excretion rate (CMO:0000759)15141686771Rat
1641887Alcrsp14Alcohol response QTL 14response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)15142356671Rat
2298549Neuinf12Neuroinflammation QTL 123.5nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)15155302115Rat
10401805Kidm51Kidney mass QTL 51kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1530632945306329Rat
5684946Bss98Bone structure and strength QTL 983.90.0026tibia strength trait (VT:1000284)tibia ultimate force (CMO:0001734)15105825014481294Rat
1641913Colcr2Colorectal carcinoma resistance QTL 26.570.0197intestine integrity trait (VT:0010554)colorectal tumor number (CMO:0001794)15226636822711984Rat
1641913Colcr2Colorectal carcinoma resistance QTL 26.570.0197intestine integrity trait (VT:0010554)poorly differentiated malignant colorectal tumor number (CMO:0002076)15226636822711984Rat
738017Hcas7Hepatocarcinoma susceptibility QTL 72.91liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)15226636846921453Rat

Markers in Region
D15Rat38  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2152,266,368 - 2,266,460 (+)MAPPERmRatBN7.2
Rnor_6.0152,327,877 - 2,327,968NCBIRnor6.0
Rnor_5.0152,310,393 - 2,310,484UniSTSRnor5.0
RGSC_v3.4152,306,221 - 2,306,312UniSTSRGSC3.4
RGSC_v3.4152,306,220 - 2,306,312RGDRGSC3.4
RGSC_v3.1152,306,221 - 2,306,312RGD
Celera152,313,913 - 2,314,004UniSTS
RH 3.4 Map1542.5RGD
RH 3.4 Map1542.5UniSTS
RH 2.0 Map150.0RGD
SHRSP x BN Map152.7498RGD
FHH x ACI Map150.0RGD
Cytogenetic Map15p16UniSTS
D15Rat129  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2151,604,099 - 1,604,246 (+)MAPPERmRatBN7.2
Rnor_6.0151,644,845 - 1,644,991NCBIRnor6.0
Rnor_5.0151,629,187 - 1,629,333UniSTSRnor5.0
RGSC_v3.4151,615,818 - 1,615,965RGDRGSC3.4
RGSC_v3.4151,615,819 - 1,615,965UniSTSRGSC3.4
RGSC_v3.1151,615,818 - 1,615,965RGD
Celera152,969,286 - 2,969,432UniSTS
FHH x ACI Map150.0UniSTS
FHH x ACI Map150.0RGD
Cytogenetic Map15p16UniSTS
D15Got3  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2151,548,817 - 1,549,070 (+)MAPPERmRatBN7.2
Rnor_6.0151,590,090 - 1,590,342NCBIRnor6.0
Rnor_5.0151,574,432 - 1,574,684UniSTSRnor5.0
RGSC_v3.4151,560,540 - 1,560,793RGDRGSC3.4
RGSC_v3.4151,560,541 - 1,560,793UniSTSRGSC3.4
RGSC_v3.1151,560,541 - 1,560,793RGD
Celera153,024,480 - 3,024,710UniSTS
RH 3.4 Map1539.5UniSTS
RH 3.4 Map1539.5RGD
RH 2.0 Map150.0RGD
Cytogenetic Map15p16UniSTS
D15Got6  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2151,822,483 - 1,822,602 (+)MAPPERmRatBN7.2
Rnor_6.0151,876,718 - 1,876,836NCBIRnor6.0
Rnor_5.0151,860,340 - 1,860,458UniSTSRnor5.0
RGSC_v3.4151,858,733 - 1,858,852RGDRGSC3.4
RGSC_v3.4151,858,734 - 1,858,852UniSTSRGSC3.4
RGSC_v3.1151,858,734 - 1,858,852RGD
Celera152,754,561 - 2,754,679UniSTS
RH 3.4 Map150.5UniSTS
RH 3.4 Map150.5RGD
RH 2.0 Map150.0RGD
Cytogenetic Map15p16UniSTS
D15Mco10  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2151,822,390 - 1,822,579 (+)MAPPERmRatBN7.2
Rnor_6.0151,876,625 - 1,876,813NCBIRnor6.0
Rnor_5.0151,860,247 - 1,860,435UniSTSRnor5.0
RGSC_v3.4151,858,640 - 1,858,829RGDRGSC3.4
RGSC_v3.4151,858,641 - 1,858,829UniSTSRGSC3.4
RGSC_v3.1151,858,640 - 1,858,829RGD
Celera152,754,584 - 2,754,772UniSTS
Cytogenetic Map15p16UniSTS
D15M14Mit230  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2151,347,182 - 1,347,282 (+)MAPPERmRatBN7.2
Rnor_6.0151,390,771 - 1,390,870NCBIRnor6.0
Rnor_5.0151,375,782 - 1,375,881UniSTSRnor5.0
RGSC_v3.4151,318,740 - 1,318,839UniSTSRGSC3.4
Celera153,223,200 - 3,223,299UniSTS
Cytogenetic Map15p16UniSTS
D15Got220  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2151,822,450 - 1,822,564 (+)MAPPERmRatBN7.2
Rnor_6.0151,876,685 - 1,876,798NCBIRnor6.0
Rnor_5.0151,860,307 - 1,860,420UniSTSRnor5.0
RGSC_v3.4151,858,701 - 1,858,814UniSTSRGSC3.4
Celera152,754,599 - 2,754,712UniSTS
Cytogenetic Map15p16UniSTS
BF403721  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2152,118,822 - 2,118,987 (+)MAPPERmRatBN7.2
Rnor_6.0152,172,547 - 2,172,711NCBIRnor6.0
Rnor_5.0152,154,746 - 2,154,910UniSTSRnor5.0
RGSC_v3.4152,157,811 - 2,157,975UniSTSRGSC3.4
Celera152,460,718 - 2,460,882UniSTS
RH 3.4 Map1546.0UniSTS
Cytogenetic Map15p16UniSTS
BF403389  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2152,118,695 - 2,118,853 (+)MAPPERmRatBN7.2
Rnor_6.0152,172,420 - 2,172,577NCBIRnor6.0
Rnor_5.0152,154,619 - 2,154,776UniSTSRnor5.0
RGSC_v3.4152,157,684 - 2,157,841UniSTSRGSC3.4
Celera152,460,852 - 2,461,009UniSTS
RH 3.4 Map1545.8UniSTS
Cytogenetic Map15p16UniSTS
AU046601  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2152,189,263 - 2,189,374 (+)MAPPERmRatBN7.2
Rnor_6.0152,250,632 - 2,250,742NCBIRnor6.0
Rnor_5.0152,233,221 - 2,233,331UniSTSRnor5.0
RGSC_v3.4152,229,159 - 2,229,269UniSTSRGSC3.4
Celera152,390,945 - 2,391,055UniSTS
Cytogenetic Map15p16UniSTS
AW528326  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2151,292,231 - 1,292,503 (+)MAPPERmRatBN7.2
Rnor_6.0151,335,935 - 1,336,206NCBIRnor6.0
Rnor_5.0151,320,946 - 1,321,217UniSTSRnor5.0
RGSC_v3.4151,261,819 - 1,262,090UniSTSRGSC3.4
Celera153,270,899 - 3,271,170UniSTS
RH 3.4 Map1539.8UniSTS
Cytogenetic Map15p16UniSTS
Z7925  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2152,171,557 - 2,172,012 (+)MAPPERmRatBN7.2
Rnor_6.0152,232,988 - 2,233,442NCBIRnor6.0
Rnor_5.0152,216,468 - 2,216,922UniSTSRnor5.0
RGSC_v3.4152,210,168 - 2,210,622UniSTSRGSC3.4
Cytogenetic Map15p16UniSTS


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000100513   ⟹   ENSRNOP00000091875
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl151,588,907 - 2,284,749 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000113268   ⟹   ENSRNOP00000084379
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl151,557,636 - 2,284,749 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000117097   ⟹   ENSRNOP00000094277
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl151,225,710 - 2,284,749 (-)Ensembl
RefSeq Acc Id: NM_001109441   ⟹   NP_001102911
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8151,275,139 - 2,334,060 (-)NCBI
mRatBN7.2151,225,711 - 2,284,669 (-)NCBI
Rnor_6.0151,269,869 - 2,346,236 (-)NCBI
Rnor_5.0151,252,267 - 2,328,752 (-)NCBI
RGSC_v3.4151,191,953 - 2,324,521 (-)RGD
Celera152,295,853 - 3,337,686 (+)RGD
Sequence:
RefSeq Acc Id: XM_063274629   ⟹   XP_063130699
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8151,414,135 - 2,334,150 (-)NCBI
RefSeq Acc Id: XM_063274630   ⟹   XP_063130700
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8151,414,135 - 1,761,269 (-)NCBI
RefSeq Acc Id: XM_063274631   ⟹   XP_063130701
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8151,718,998 - 2,334,153 (-)NCBI
RefSeq Acc Id: XM_063274632   ⟹   XP_063130702
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8151,356,649 - 2,334,119 (-)NCBI
RefSeq Acc Id: XM_063274633   ⟹   XP_063130703
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8151,275,141 - 2,334,096 (-)NCBI
RefSeq Acc Id: XM_063274634   ⟹   XP_063130704
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8151,475,483 - 2,334,110 (-)NCBI
RefSeq Acc Id: XM_063274635   ⟹   XP_063130705
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8151,377,666 - 2,334,107 (-)NCBI
RefSeq Acc Id: XM_063274636   ⟹   XP_063130706
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8151,414,135 - 1,546,376 (-)NCBI
Reference Protein Sequences
RefSeq Acc Id: NP_001102911   ⟸   NM_001109441
- UniProtKB: A0A8I6GL34 (UniProtKB/TrEMBL),   A6KKT9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000094277   ⟸   ENSRNOT00000117097
RefSeq Acc Id: ENSRNOP00000091875   ⟸   ENSRNOT00000100513
RefSeq Acc Id: ENSRNOP00000084379   ⟸   ENSRNOT00000113268
RefSeq Acc Id: XP_063130703   ⟸   XM_063274633
- Peptide Label: isoform X5
- UniProtKB: A0A8I6GL34 (UniProtKB/TrEMBL),   A6KKT9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063130702   ⟸   XM_063274632
- Peptide Label: isoform X4
RefSeq Acc Id: XP_063130705   ⟸   XM_063274635
- Peptide Label: isoform X7
RefSeq Acc Id: XP_063130699   ⟸   XM_063274629
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063130700   ⟸   XM_063274630
- Peptide Label: isoform X2
RefSeq Acc Id: XP_063130706   ⟸   XM_063274636
- Peptide Label: isoform X8
RefSeq Acc Id: XP_063130704   ⟸   XM_063274634
- Peptide Label: isoform X6
RefSeq Acc Id: XP_063130701   ⟸   XM_063274631
- Peptide Label: isoform X3

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1596707 AgrOrtholog
BioCyc Gene G2FUF-14608 BioCyc
Ensembl Genes ENSRNOG00000069198 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000100513.1 UniProtKB/TrEMBL
  ENSRNOT00000113268.1 UniProtKB/TrEMBL
  ENSRNOT00000117097 ENTREZGENE
  ENSRNOT00000117097.1 UniProtKB/TrEMBL
Gene3D-CATH 3.80.10.10 UniProtKB/TrEMBL
InterPro Leu-rich_rpt UniProtKB/TrEMBL
  LRMDA UniProtKB/TrEMBL
  LRR_dom_sf UniProtKB/TrEMBL
KEGG Report rno:681383 UniProtKB/TrEMBL
NCBI Gene 681383 ENTREZGENE
PANTHER LEUCINE-RICH MELANOCYTE DIFFERENTIATION-ASSOCIATED PROTEIN UniProtKB/TrEMBL
  PTHR46282 UniProtKB/TrEMBL
Pfam LRR_9 UniProtKB/TrEMBL
PhenoGen Lrmda PhenoGen
PROSITE LRR UniProtKB/TrEMBL
RatGTEx ENSRNOG00000069198 RatGTEx
Superfamily-SCOP L domain-like UniProtKB/TrEMBL
UniProt A0A8I5ZZ54_RAT UniProtKB/TrEMBL
  A0A8I6AGM7_RAT UniProtKB/TrEMBL
  A0A8I6GL34 ENTREZGENE, UniProtKB/TrEMBL
  A6KKT9 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-05-23 Lrmda  leucine rich melanocyte differentiation associated  LOC681383  similar to Protein C10orf11 homolog  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-11-20 LOC681383  similar to Protein C10orf11 homolog      Symbol and Name status set to provisional 70820 PROVISIONAL