ONTOLOGY REPORT - ANNOTATIONS


Term:pigmentation
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Accession:GO:0043473 term browser browse the term
Definition:The accumulation of pigment in an organism, tissue or cell, either by increased deposition or by increased number of cells.
Synonyms:only_in_taxon: NCBITaxon:131567 ! cellular organisms


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pigmentation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arcn1 archain 1 JBrowse link 8 49,051,257 49,075,861 RGD:1624291
G Asip agouti signaling protein JBrowse link 3 150,492,010 150,579,870 RGD:1624291
G Atp7a ATPase copper transporting alpha JBrowse link X 77,076,085 77,193,644 RGD:1624291
G Atrn attractin JBrowse link 3 123,434,409 123,567,922 RGD:1624291
RGD:67998
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:1624291
G Bloc1s3 biogenesis of lysosomal organelles complex-1, subunit 3 JBrowse link 1 80,414,766 80,417,385 RGD:1624291
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 JBrowse link 3 114,869,478 114,880,218 RGD:1624291
G Cd63 Cd63 molecule JBrowse link 7 3,320,250 3,335,583 RGD:1624291
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 JBrowse link X 72,128,996 72,133,692 RGD:1624291
RGD:1600115
G Dct dopachrome tautomerase JBrowse link 15 103,208,174 103,245,033 RGD:1624291
G Dock7 dedicator of cytokinesis 7 JBrowse link 5 117,595,194 117,780,844 RGD:1624291
G Drd2 dopamine receptor D2 JBrowse link 8 53,678,777 53,743,643 RGD:1624291
G Eda ectodysplasin-A JBrowse link X 69,730,123 70,222,693 RGD:1624291
G Edar ectodysplasin-A receptor JBrowse link 20 28,179,132 28,263,092 RGD:1624291
G Ednrb endothelin receptor type B JBrowse link 15 88,004,775 88,036,354 RGD:628515
RGD:1624291
G En1 engrailed homeobox 1 JBrowse link 13 36,532,758 36,537,888 RGD:1624291
G Fig4 FIG4 phosphoinositide 5-phosphatase JBrowse link 20 45,922,806 46,044,754 RGD:1624291
G Hps1 HPS1, biogenesis of lysosomal organelles complex 3 subunit 1 JBrowse link 1 261,989,178 262,015,282 RGD:1624291
G Hps3 HPS3, biogenesis of lysosomal organelles complex 2 subunit 1 JBrowse link 2 104,789,423 104,832,964 RGD:1624291
G Hps5 HPS5, biogenesis of lysosomal organelles complex 2 subunit 2 JBrowse link 1 102,810,114 102,849,430 RGD:1624291
G Hps6 HPS6, biogenesis of lysosomal organelles complex 2 subunit 3 JBrowse link 1 265,761,818 265,764,427 RGD:1624291
G Kit KIT proto-oncogene receptor tyrosine kinase JBrowse link 14 35,072,131 35,149,638 RGD:1624291
G Krt76 keratin 76 JBrowse link 7 143,488,668 143,497,108 RGD:1624291
G Lyst lysosomal trafficking regulator JBrowse link 17 90,323,055 90,522,091 RGD:1302441
RGD:1624291
G Mc1r melanocortin 1 receptor JBrowse link 19 56,215,420 56,219,987 RGD:1624291
G Mfsd12 major facilitator superfamily domain containing 12 JBrowse link 7 11,214,832 11,223,713 RGD:1624291
G Mitf melanogenesis associated transcription factor JBrowse link 4 130,172,484 130,425,496 RGD:1624291
G Mlph melanophilin JBrowse link 9 98,072,965 98,108,429 RGD:1624291
G Mreg melanoregulin JBrowse link 9 79,490,058 79,559,768 RGD:1624291
G Myc MYC proto-oncogene, bHLH transcription factor JBrowse link 7 102,586,313 102,591,240 RGD:1624291
G Myo5a myosin VA JBrowse link 8 82,038,966 82,156,507 RGD:61493
RGD:1624291
G Mysm1 myb-like, SWIRM and MPN domains 1 JBrowse link 5 113,902,115 113,939,083 RGD:1624291
G Nf1 neurofibromin 1 JBrowse link 10 66,732,460 66,928,706 RGD:1600115
RGD:1624291
G Oca2 OCA2 melanosomal transmembrane protein JBrowse link 1 114,661,970 114,987,433 RGD:1624291
G Rab27a RAB27A, member RAS oncogene family JBrowse link 8 79,722,334 79,776,228 RGD:1624291
G Rack1 receptor for activated C kinase 1 JBrowse link 10 34,149,717 34,155,198 RGD:1624291
G Recql4 RecQ like helicase 4 JBrowse link 7 117,765,892 117,773,128 RGD:1624291
G Snai2 snail family transcriptional repressor 2 JBrowse link 11 90,404,421 90,406,730 RGD:1624291
G Sparc secreted protein acidic and cysteine rich JBrowse link 10 40,742,390 40,764,232 RGD:1624291
G Szt2 SZT2, KICSTOR complex subunit JBrowse link 5 137,192,120 137,238,384 RGD:1624291
G Trappc6a trafficking protein particle complex 6A JBrowse link 1 80,417,514 80,424,429 RGD:1624291
G Tyr tyrosinase JBrowse link 1 151,012,598 151,106,802 RGD:1599687
RGD:1624291
G Tyrp1 tyrosinase-related protein 1 JBrowse link 5 98,387,291 98,406,083 RGD:1624291
G Vangl1 VANGL planar cell polarity protein 1 JBrowse link 2 204,575,592 204,625,835 RGD:1624291
G Vps33a VPS33A CORVET/HOPS core subunit JBrowse link 12 38,459,816 38,482,903 RGD:1624291
RGD:1600115
cellular pigmentation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pomc proopiomelanocortin JBrowse link 6 28,382,937 28,388,771 RGD:1624291
RGD:1600115
developmental pigmentation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:1624291
G Bcl2l11 BCL2 like 11 JBrowse link 3 120,726,906 120,764,192 RGD:1624291
G Bloc1s3 biogenesis of lysosomal organelles complex-1, subunit 3 JBrowse link 1 80,414,766 80,417,385 RGD:1624291
G Bloc1s5 biogenesis of lysosomal organelles complex 1 subunit 5 JBrowse link 17 26,808,193 26,833,257 RGD:1624291
G Dct dopachrome tautomerase JBrowse link 15 103,208,174 103,245,033 RGD:1624291
G Ednrb endothelin receptor type B JBrowse link 15 88,004,775 88,036,354 RGD:1624291
G Gna11 G protein subunit alpha 11 JBrowse link 7 11,033,400 11,047,284 RGD:1624291
RGD:1600115
G Gnaq G protein subunit alpha q JBrowse link 1 233,382,778 233,622,584 RGD:1624291
RGD:1600115
G Kit KIT proto-oncogene receptor tyrosine kinase JBrowse link 14 35,072,131 35,149,638 RGD:1624291
G Mreg melanoregulin JBrowse link 9 79,490,058 79,559,768 RGD:1624291
G Myo5a myosin VA JBrowse link 8 82,038,966 82,156,507 RGD:1624291
G Oca2 OCA2 melanosomal transmembrane protein JBrowse link 1 114,661,970 114,987,433 RGD:1624291
G Pax3 paired box 3 JBrowse link 9 84,004,004 84,101,226 RGD:1624291
G Pmel premelanosome protein JBrowse link 7 3,133,347 3,143,827 RGD:1600115
G Slc45a2 solute carrier family 45, member 2 JBrowse link 2 60,966,671 60,999,398 RGD:1624291
G Zeb2 zinc finger E-box binding homeobox 2 JBrowse link 3 29,857,289 29,985,932 RGD:1624291
G Zic2 Zic family member 2 JBrowse link 15 108,908,366 108,913,812 RGD:1624291
endosome to melanosome transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ankrd27 ankyrin repeat domain 27 JBrowse link 1 91,857,048 91,958,763 RGD:1624291
G Ap1g1 adaptor-related protein complex 1, gamma 1 subunit JBrowse link 19 41,805,252 41,860,076 RGD:1624291
G Ap1m1 adaptor-related protein complex 1, mu 1 subunit JBrowse link 16 19,288,354 19,303,818 RGD:1624291
G Ap3d1 adaptor-related protein complex 3, delta 1 subunit JBrowse link 7 11,838,639 11,873,992 RGD:1624291
G Bloc1s3 biogenesis of lysosomal organelles complex-1, subunit 3 JBrowse link 1 80,414,766 80,417,385 RGD:1624291
G Bloc1s5 biogenesis of lysosomal organelles complex 1 subunit 5 JBrowse link 17 26,808,193 26,833,257 RGD:1624291
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 JBrowse link 3 114,869,478 114,880,218 RGD:1624291
RGD:1600115
G Cd63 Cd63 molecule JBrowse link 7 3,320,250 3,335,583 RGD:1600115
RGD:1624291
G Rab32 RAB32, member RAS oncogene family JBrowse link 1 4,638,663 4,653,220 RGD:1624291
G Rab38 RAB38, member RAS oncogene family JBrowse link 1 152,072,716 152,153,449 RGD:1624291
erythrophore differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sod2 superoxide dismutase 2 JBrowse link 1 47,914,757 47,921,587 RGD:1624291
establishment of melanosome localization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rab17 RAB17, member RAS oncogene family JBrowse link 9 98,118,907 98,131,883 RGD:1624291
G Shroom2 shroom family member 2 JBrowse link X 23,478,869 23,649,424 RGD:1600115
eye pigmentation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp6ap2 ATPase H+ transporting accessory protein 2 JBrowse link X 11,137,889 11,164,854 RGD:1624291
G Hps1 HPS1, biogenesis of lysosomal organelles complex 3 subunit 1 JBrowse link 1 261,989,178 262,015,282 RGD:1624291
G Lef1 lymphoid enhancer binding factor 1 JBrowse link 2 236,232,115 236,345,061 RGD:1600115
G Vhl von Hippel-Lindau tumor suppressor JBrowse link 4 145,580,869 145,587,835 RGD:1624291
melanocyte differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:1624291
RGD:1600115
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 JBrowse link 3 114,869,478 114,880,218 RGD:1624291
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 JBrowse link X 72,128,996 72,133,692 RGD:1624291
RGD:1600115
G Edn3 endothelin 3 JBrowse link 3 172,856,730 172,879,276 RGD:1624291
G Ednrb endothelin receptor type B JBrowse link 15 88,004,775 88,036,354 RGD:628459
RGD:1624291
G Gli3 GLI family zinc finger 3 JBrowse link 17 52,294,942 52,569,036 RGD:1624291
G Hps1 HPS1, biogenesis of lysosomal organelles complex 3 subunit 1 JBrowse link 1 261,989,178 262,015,282 RGD:1624291
G Hps4 HPS4, biogenesis of lysosomal organelles complex 3 subunit 2 JBrowse link 12 50,285,239 50,315,893 RGD:1624291
G Hps6 HPS6, biogenesis of lysosomal organelles complex 2 subunit 3 JBrowse link 1 265,761,818 265,764,427 RGD:1624291
G Kit KIT proto-oncogene receptor tyrosine kinase JBrowse link 14 35,072,131 35,149,638 RGD:1624291
G Lrmda leucine rich melanocyte differentiation associated JBrowse link 15 1,269,869 2,346,246 RGD:1624291
G Mef2c myocyte enhancer factor 2C JBrowse link 2 11,658,534 11,822,788 RGD:1624291
RGD:1600115
G Mitf melanogenesis associated transcription factor JBrowse link 4 130,172,484 130,425,496 RGD:1624291
RGD:1600115
G Mlph melanophilin JBrowse link 9 98,072,965 98,108,429 RGD:1624291
G Mreg melanoregulin JBrowse link 9 79,490,058 79,559,768 RGD:1624291
G Myo5a myosin VA JBrowse link 8 82,038,966 82,156,507 RGD:1624291
G Oca2 OCA2 melanosomal transmembrane protein JBrowse link 1 114,661,970 114,987,433 RGD:1624291
G Rab27a RAB27A, member RAS oncogene family JBrowse link 8 79,722,334 79,776,228 RGD:1624291
G Sox10 SRY box 10 JBrowse link 7 120,393,238 120,403,523 RGD:1624291
G Tyrp1 tyrosinase-related protein 1 JBrowse link 5 98,387,291 98,406,083 RGD:1624291
melanosome assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hps1 HPS1, biogenesis of lysosomal organelles complex 3 subunit 1 JBrowse link 1 261,989,178 262,015,282 RGD:1624291
G Hps4 HPS4, biogenesis of lysosomal organelles complex 3 subunit 2 JBrowse link 12 50,285,239 50,315,893 RGD:1624291
G Rab32 RAB32, member RAS oncogene family JBrowse link 1 4,638,663 4,653,220 RGD:1624291
G Rab38 RAB38, member RAS oncogene family JBrowse link 1 152,072,716 152,153,449 RGD:1624291
G Trappc6a trafficking protein particle complex 6A JBrowse link 1 80,417,514 80,424,429 RGD:1624291
RGD:1600115
melanosome localization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gpr143 G protein-coupled receptor 143 JBrowse link X 23,668,363 23,693,162 RGD:1624291
G Mlph melanophilin JBrowse link 9 98,072,965 98,108,429 RGD:1624291
G Myo5a myosin VA JBrowse link 8 82,038,966 82,156,507 RGD:1624291
G Rab27a RAB27A, member RAS oncogene family JBrowse link 8 79,722,334 79,776,228 RGD:1624291
G Vps33a VPS33A CORVET/HOPS core subunit JBrowse link 12 38,459,816 38,482,903 RGD:1624291
G Vps33b VPS33B, late endosome and lysosome associated JBrowse link 1 142,060,955 142,083,955 RGD:1624291
melanosome organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ap1m1 adaptor-related protein complex 1, mu 1 subunit JBrowse link 16 19,288,354 19,303,818 RGD:1624291
G Ap3b1 adaptor-related protein complex 3, beta 1 subunit JBrowse link 2 24,022,815 24,227,522 RGD:1624291
G Asip agouti signaling protein JBrowse link 3 150,492,010 150,579,870 RGD:1624291
G Bloc1s3 biogenesis of lysosomal organelles complex-1, subunit 3 JBrowse link 1 80,414,766 80,417,385 RGD:1624291
G Bloc1s4 biogenesis of lysosomal organelles complex 1 subunit 4 JBrowse link 14 79,013,808 79,015,108 RGD:1624291
G Gpr143 G protein-coupled receptor 143 JBrowse link X 23,668,363 23,693,162 RGD:1624291
G Kif13a kinesin family member 13A JBrowse link 17 18,151,582 18,335,027 RGD:1624291
G Lyst lysosomal trafficking regulator JBrowse link 17 90,323,055 90,522,091 RGD:1624291
G Pmel premelanosome protein JBrowse link 7 3,133,347 3,143,827 RGD:1624291
RGD:1600115
G Rab29 RAB29, member RAS oncogene family JBrowse link 13 48,644,575 48,650,229 RGD:1600115
G Rab32 RAB32, member RAS oncogene family JBrowse link 1 4,638,663 4,653,220 RGD:1600115
G Shroom2 shroom family member 2 JBrowse link X 23,478,869 23,649,424 RGD:1600115
RGD:1624291
G Tyrp1 tyrosinase-related protein 1 JBrowse link 5 98,387,291 98,406,083 RGD:1624291
melanosome transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Asip agouti signaling protein JBrowse link 3 150,492,010 150,579,870 RGD:1624291
G Bloc1s3 biogenesis of lysosomal organelles complex-1, subunit 3 JBrowse link 1 80,414,766 80,417,385 RGD:1624291
G Bloc1s5 biogenesis of lysosomal organelles complex 1 subunit 5 JBrowse link 17 26,808,193 26,833,257 RGD:1624291
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 JBrowse link 3 114,869,478 114,880,218 RGD:1624291
RGD:1600115
G Dctn1 dynactin subunit 1 JBrowse link 4 114,876,770 114,896,567 RGD:1624291
RGD:1600115
G Dctn2 dynactin subunit 2 JBrowse link 7 70,555,953 70,571,433 RGD:1624291
RGD:1600115
G Gpr143 G protein-coupled receptor 143 JBrowse link X 23,668,363 23,693,162 RGD:1624291
G Map2k1 mitogen activated protein kinase kinase 1 JBrowse link 8 69,134,218 69,722,573 RGD:2293208
G Mreg melanoregulin JBrowse link 9 79,490,058 79,559,768 RGD:1624291
G Myo5a myosin VA JBrowse link 8 82,038,966 82,156,507 RGD:1624291
G Rab11a RAB11a, member RAS oncogene family JBrowse link 8 70,192,975 70,215,719 RGD:1600115
RGD:1624291
G Rab11b RAB11B, member RAS oncogene family JBrowse link 7 18,598,991 18,612,132 RGD:1600115
RGD:1624291
G Rab17 RAB17, member RAS oncogene family JBrowse link 9 98,118,907 98,131,883 RGD:1624291
G Rab1a RAB1A, member RAS oncogene family JBrowse link 14 104,475,082 104,500,176 RGD:1624291
G Rab27a RAB27A, member RAS oncogene family JBrowse link 8 79,722,334 79,776,228 RGD:1624291
RGD:1600115
G Rab27b RAB27B, member RAS oncogene family JBrowse link 18 68,486,006 68,644,595 RGD:1600115
negative regulation of eye pigmentation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ihh Indian hedgehog JBrowse link 9 82,208,223 82,214,440 RGD:1624291
pigment cell differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cd63 Cd63 molecule JBrowse link 7 3,320,250 3,335,583 RGD:1624291
pigment granule localization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Myo7a myosin VIIA JBrowse link 1 163,001,313 163,071,545 RGD:1624291
G Rab27a RAB27A, member RAS oncogene family JBrowse link 8 79,722,334 79,776,228 RGD:1624291
pigment granule maturation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cd63 Cd63 molecule JBrowse link 7 3,320,250 3,335,583 RGD:1600115
RGD:1624291
pigment granule organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:1624291
RGD:1600115
G Lyst lysosomal trafficking regulator JBrowse link 17 90,323,055 90,522,091 RGD:1624291
pigment granule transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Myo7a myosin VIIA JBrowse link 1 163,001,313 163,071,545 RGD:1624291
G Rab27a RAB27A, member RAS oncogene family JBrowse link 8 79,722,334 79,776,228 RGD:1624291
positive regulation of developmental pigmentation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bax BCL2 associated X, apoptosis regulator JBrowse link 1 101,451,801 101,457,207 RGD:1624291
RGD:1600115
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:1624291
positive regulation of melanocyte differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adamts20 ADAM metallopeptidase with thrombospondin type 1 motif, 20 JBrowse link 7 135,465,021 135,630,941 RGD:1624291
G Adamts9 ADAM metallopeptidase with thrombospondin type 1 motif, 9 JBrowse link 4 124,660,254 124,860,997 RGD:1624291
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:1624291
RGD:1600115
G Kitlg KIT ligand JBrowse link 7 42,269,784 42,351,054 RGD:1624291
G Zeb2 zinc finger E-box binding homeobox 2 JBrowse link 3 29,857,289 29,985,932 RGD:1624291
positive regulation of melanosome transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cdh3 cadherin 3 JBrowse link 19 38,668,957 38,719,801 RGD:1624291
positive regulation of pigment cell differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bloc1s5 biogenesis of lysosomal organelles complex 1 subunit 5 JBrowse link 17 26,808,193 26,833,257 RGD:1624291
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 JBrowse link 3 114,869,478 114,880,218 RGD:1624291
RGD:1600115
regulation of developmental pigmentation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adamts20 ADAM metallopeptidase with thrombospondin type 1 motif, 20 JBrowse link 7 135,465,021 135,630,941 RGD:1624291
G Adamts9 ADAM metallopeptidase with thrombospondin type 1 motif, 9 JBrowse link 4 124,660,254 124,860,997 RGD:1624291
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:1624291
G Bcl2l11 BCL2 like 11 JBrowse link 3 120,726,906 120,764,192 RGD:1624291
G Edn3 endothelin 3 JBrowse link 3 172,856,730 172,879,276 RGD:1624291
G Kit KIT proto-oncogene receptor tyrosine kinase JBrowse link 14 35,072,131 35,149,638 RGD:1624291
G Vps33a VPS33A CORVET/HOPS core subunit JBrowse link 12 38,459,816 38,482,903 RGD:1624291
RGD:1600115
regulation of eye pigmentation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Spns2 sphingolipid transporter 2 JBrowse link 10 59,010,428 59,049,482 RGD:1624291
regulation of melanocyte differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gna11 G protein subunit alpha 11 JBrowse link 7 11,033,400 11,047,284 RGD:1624291
RGD:1600115
G Gnaq G protein subunit alpha q JBrowse link 1 233,382,778 233,622,584 RGD:1624291
RGD:1600115
regulation of melanosome organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gpr143 G protein-coupled receptor 143 JBrowse link X 23,668,363 23,693,162 RGD:1624291
G Zeb2 zinc finger E-box binding homeobox 2 JBrowse link 3 29,857,289 29,985,932 RGD:1624291
regulation of melanosome transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gpr143 G protein-coupled receptor 143 JBrowse link X 23,668,363 23,693,162 RGD:1624291
rhodopsin metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Grk3 G protein-coupled receptor kinase 3 JBrowse link 12 49,626,871 49,750,389 RGD:5685371

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17463
    pigmentation 95
      cellular pigmentation + 42
      developmental pigmentation + 50
      ocellus pigmentation + 0
      pigment accumulation + 10
      pigment metabolic process involved in pigmentation + 1
paths to the root