ONTOLOGY REPORT - ANNOTATIONS |
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Term: | toll-like receptor 4 signaling pathway |
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Accession: | GO:0034142
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browse the term
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Definition: | The series of molecular signals initiated by a ligand binding to toll-like receptor 4. |
Synonyms: | exact_synonym: | TLR4 signaling pathway; toll-like receptor 4 signalling pathway |
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Cd14 |
CD14 molecule |
involved_in |
ISO IBA |
(PMID:27986454) GO_REF:0000033 |
RGD GO_Central |
PMID:27986454 |
GO_REF:0000033 |
NCBI chr18:28,335,522...28,337,383
Ensembl chr18:28,335,340...28,337,261
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Chuk |
component of inhibitor of nuclear factor kappa B kinase complex |
involved_in |
ISO |
(PMID:26189595) |
RGD |
PMID:26189595 |
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NCBI chr 1:242,959,539...242,995,066
Ensembl chr 1:242,959,760...242,995,065
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Ecsit |
ECSIT signaling integrator |
involved_in |
ISO |
(PMID:25371197) |
RGD |
PMID:25371197 |
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NCBI chr 8:20,605,583...20,618,453
Ensembl chr 8:20,605,583...20,618,390
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Hmgb1 |
high mobility group box 1 |
involved_in |
ISO |
(PMID:14660645) |
RGD |
PMID:14660645 |
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NCBI chr12:5,972,950...5,979,658
Ensembl chr12:5,901,586...5,978,565 Ensembl chr16:5,901,586...5,978,565
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Irak1 |
interleukin-1 receptor-associated kinase 1 |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 (PMID:10549626) |
GO_Central RGD |
PMID:10549626 |
GO_REF:0000033 |
NCBI chr X:151,768,621...151,778,521
Ensembl chr X:151,768,777...151,778,521
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Irak2 |
interleukin-1 receptor-associated kinase 2 |
involved_in |
ISO |
(PMID:17878161) |
RGD |
PMID:17878161 |
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NCBI chr 4:146,786,004...146,842,615
Ensembl chr 4:146,786,100...146,842,602
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Irf3 |
interferon regulatory factor 3 |
involved_in |
ISO |
(PMID:25636800) |
RGD |
PMID:25636800 |
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NCBI chr 1:95,479,966...95,484,926
Ensembl chr 1:95,479,821...95,484,935
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Lgals9 |
galectin 9 |
NOT|involved_in |
ISO |
(PMID:16116184) |
RGD |
PMID:16116184 |
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NCBI chr10:63,907,018...63,930,224
Ensembl chr10:63,907,018...63,930,045
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Ly96 |
lymphocyte antigen 96 |
involved_in |
ISO |
(MGI:5645195|PMID:24380872) |
RGD |
PMID:24380872 |
MGI:5645195 |
NCBI chr 5:2,582,233...2,612,357
Ensembl chr 5:2,582,254...2,612,386
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Lyn |
LYN proto-oncogene, Src family tyrosine kinase |
involved_in |
ISO |
(MGI:5913054|PMID:28098138) |
RGD |
PMID:28098138 |
MGI:5913054 |
NCBI chr 5:16,639,512...16,755,501
Ensembl chr 5:16,639,466...16,756,868
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Map3k7 |
mitogen activated protein kinase kinase kinase 7 |
involved_in |
ISO |
(PMID:25371197) |
RGD |
PMID:25371197 |
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NCBI chr 5:46,356,973...46,415,597
Ensembl chr 5:46,357,931...46,415,597
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Myd88 |
MYD88, innate immune signal transduction adaptor |
involved_in |
ISO IBA IEA |
(PMID:16751103) GO_REF:0000033 GO_REF:0000118 |
RGD GO_Central TreeGrafter |
PMID:16751103 |
GO_REF:0000033 GO_REF:0000118 |
NCBI chr 8:119,074,439...119,078,508
Ensembl chr 8:119,074,437...119,079,415
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Naglu |
N-acetyl-alpha-glucosaminidase |
acts_upstream_of_or_within |
ISO |
MGI:1934018 (PMID:29624734) |
RGD |
PMID:29624734 |
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NCBI chr10:86,001,545...86,009,049
Ensembl chr10:86,001,566...86,008,972
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Nfkbia |
NFKB inhibitor alpha |
involved_in acts_upstream_of_or_within |
ISO IBA IEA |
(PMID:7479976) GO_REF:0000033 (PMID:18261938) GO_REF:0000118 |
RGD GO_Central TreeGrafter |
PMID:7479976 PMID:18261938 |
GO_REF:0000033 GO_REF:0000118 |
NCBI chr 6:72,858,713...72,861,941
Ensembl chr 6:72,858,712...72,861,941
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Nmi |
N-myc (and STAT) interactor |
involved_in |
ISO |
(MGI:6099204|PMID:29038465) |
RGD |
PMID:29038465 |
MGI:6099204 |
NCBI chr 3:36,415,607...36,439,716
Ensembl chr 3:36,415,607...36,439,498
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Oas1a |
2'-5' oligoadenylate synthetase 1A |
involved_in |
ISO |
(PMID:30078389) |
RGD |
PMID:30078389 |
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NCBI chr12:35,669,798...35,680,505
Ensembl chr12:35,669,801...35,680,517
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Pik3ap1 |
phosphoinositide-3-kinase adaptor protein 1 |
involved_in |
ISO |
(MGI:5305503|PMID:22187460), (MGI:5305504|PMID:22187458) |
RGD |
PMID:22187458 PMID:22187460 |
MGI:5305503 MGI:5305504 |
NCBI chr 1:240,090,854...240,245,007
Ensembl chr 1:240,093,065...240,204,828
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Rela |
RELA proto-oncogene, NF-kB subunit |
involved_in |
ISO |
(PMID:25355951) |
RGD |
PMID:25355951 |
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NCBI chr 1:202,925,001...202,935,484
Ensembl chr 1:202,924,945...202,935,484
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Ripk2 |
receptor-interacting serine-threonine kinase 2 |
acts_upstream_of_or_within |
ISO |
MGI:2660793 (PMID:11894098) |
RGD |
PMID:11894098 |
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NCBI chr 5:29,630,806...29,662,804
Ensembl chr 5:29,631,570...29,662,657
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S100a14 |
S100 calcium binding protein A14 |
involved_in |
ISO |
(PMID:17625598) |
RGD |
PMID:17625598 |
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NCBI chr 2:176,008,395...176,010,423
Ensembl chr 2:176,008,395...176,010,423
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Scimp |
SLP adaptor and CSK interacting membrane protein |
involved_in |
ISO |
(MGI:5913054|PMID:28098138) |
RGD |
PMID:28098138 |
MGI:5913054 |
NCBI chr10:55,507,646...55,527,764
Ensembl chr10:55,507,519...55,528,171
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Tbk1 |
TANK-binding kinase 1 |
involved_in |
ISO |
(PMID:28747347) |
RGD |
PMID:28747347 |
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NCBI chr 7:57,077,830...57,110,868
Ensembl chr 7:57,077,830...57,110,892
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Ticam1 |
TIR domain containing adaptor molecule 1 |
involved_in |
ISO |
(PMID:12471095) |
RGD |
PMID:12471095 |
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NCBI chr 9:1,102,559...1,111,023
Ensembl chr 9:1,102,366...1,123,147
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Ticam2 |
TIR domain containing adaptor molecule 2 |
involved_in |
ISO |
(PMID:28630139) |
RGD |
PMID:28630139 |
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NCBI chr18:39,289,902...39,311,462
Ensembl chr18:39,294,453...39,311,462
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Tirap |
TIR domain containing adaptor protein |
involved_in |
ISO IBA |
(PMID:16751103) (PMID:11526399) GO_REF:0000033 |
RGD GO_Central |
PMID:11526399 PMID:16751103 |
GO_REF:0000033 |
NCBI chr 8:33,531,724...33,548,508
Ensembl chr 8:33,531,725...33,547,432
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Tlr4 |
toll-like receptor 4 |
involved_in acts_upstream_of_or_within |
IEA ISO IBA |
GO_REF:0000107 (PMID:25549946) GO_REF:0000033 (PMID:10196138), (PMID:15618008), (PMID:18222170) (MGI:5913054|PMID:28098138) |
Ensembl RGD GO_Central |
PMID:10196138 PMID:15618008 PMID:18222170 PMID:25549946 PMID:28098138 |
GO_REF:0000033 GO_REF:0000107 MGI:5913054 |
NCBI chr 5:80,145,867...80,159,501
Ensembl chr 5:80,145,826...80,159,628
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Tmem126a |
transmembrane protein 126A |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (PMID:25549946) |
Ensembl RGD |
PMID:25549946 |
GO_REF:0000107 |
NCBI chr 1:144,424,481...144,430,730
Ensembl chr 1:144,422,703...144,430,628
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Tnip3 |
TNFAIP3 interacting protein 3 |
involved_in |
ISO |
(PMID:17088249) |
RGD |
PMID:17088249 |
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NCBI chr 4:94,867,258...94,908,780
Ensembl chr 4:94,811,097...94,907,605
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Traf3 |
Tnf receptor-associated factor 3 |
involved_in |
ISO |
(PMID:18222170) |
RGD |
PMID:18222170 |
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NCBI chr 6:130,199,696...130,307,168
Ensembl chr 6:130,206,484...130,305,481
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Traf6 |
TNF receptor associated factor 6 |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:25371197) |
Ensembl RGD |
PMID:25371197 |
GO_REF:0000107 |
NCBI chr 3:87,963,517...87,988,316
Ensembl chr 3:87,963,514...87,983,507
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Tril |
TLR4 interactor with leucine-rich repeats |
involved_in |
ISO IBA |
(PMID:19710467) GO_REF:0000033 |
RGD GO_Central |
PMID:19710467 |
GO_REF:0000033 |
NCBI chr 4:82,922,327...82,927,172
Ensembl chr 4:82,922,328...82,927,172
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Lrrfip2 |
LRR binding FLII interacting protein 2 |
acts_upstream_of_or_within |
ISO |
(PMID:19265123) |
RGD |
PMID:19265123 |
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NCBI chr 8:111,091,453...111,193,947
Ensembl chr 8:111,091,503...111,193,255
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Acod1 |
aconitate decarboxylase 1 |
involved_in |
ISO |
(MGI:5490396|PMID:23609450) |
RGD |
PMID:23609450 |
MGI:5490396 |
NCBI chr15:79,871,819...79,881,101
Ensembl chr15:79,871,827...79,880,529
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Bpifb1 |
BPI fold containing family B, member 1 |
involved_in |
ISO IBA IEA |
(PMID:21900486) GO_REF:0000033 GO_REF:0000118 GO_REF:0000107 |
RGD GO_Central TreeGrafter Ensembl |
PMID:21900486 |
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 |
NCBI chr 3:142,672,995...142,706,258
Ensembl chr 3:142,672,995...142,706,256
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Dab2ip |
DAB2 interacting protein |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (PMID:19948740) |
UniProt Ensembl RGD |
PMID:19948740 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 3:18,915,290...19,086,282
Ensembl chr 3:18,915,290...19,086,280
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Lyn |
LYN proto-oncogene, Src family tyrosine kinase |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:4456928|PMID:20385881) |
UniProt RGD |
PMID:20385881 |
GO_REF:0000024 MGI:4456928 |
NCBI chr 5:16,639,512...16,755,501
Ensembl chr 5:16,639,466...16,756,868
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Mfhas1 |
multifunctional ROCO family signaling regulator 1 |
involved_in |
ISO |
(PMID:28609714) |
RGD |
PMID:28609714 |
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NCBI chr16:56,545,462...56,633,649
Ensembl chr16:56,546,207...56,633,743
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Mir140 |
microRNA 140 |
involved_in |
ISO |
UniProtKB:O00206 (PMID:30233718), (PMID:30321456) |
RGD |
PMID:30233718 PMID:30321456 |
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NCBI chr19:35,465,577...35,465,675
Ensembl chr19:35,465,577...35,465,675
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Mir200b |
microRNA 200b |
involved_in |
ISO |
(PMID:22522429) |
RGD |
PMID:22522429 |
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NCBI chr 5:166,649,272...166,649,366
Ensembl chr 5:166,649,272...166,649,366
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Mir200c |
microRNA 200c |
involved_in |
ISO |
(PMID:22522429) |
RGD |
PMID:22522429 |
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NCBI chr 4:157,523,679...157,523,747
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Mir20a |
microRNA 20a |
involved_in |
ISO |
(PMID:29653364) |
RGD |
PMID:29653364 |
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NCBI chr15:92,181,084...92,181,168
Ensembl chr15:92,181,084...92,181,168
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Mir708 |
microRNA 708 |
involved_in |
ISO |
(PMID:31599428) |
RGD |
PMID:31599428 |
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NCBI chr 1:150,599,876...150,599,963
Ensembl chr 1:150,599,876...150,599,963
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Nr1d1 |
nuclear receptor subfamily 1, group D, member 1 |
involved_in |
ISO IEA |
(PMID:18511497) GO_REF:0000107 |
RGD Ensembl |
PMID:18511497 |
GO_REF:0000107 |
NCBI chr10:83,728,348...83,735,562
Ensembl chr10:83,728,318...83,735,705
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Rab7b |
Rab7b, member RAS oncogene family |
involved_in |
ISO |
(MGI:3834524|PMID:17395780) |
RGD |
PMID:17395780 |
MGI:3834524 |
NCBI chr13:43,121,168...43,147,581
Ensembl chr13:43,121,226...43,147,581
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Sqstm1 |
sequestosome 1 |
involved_in |
ISO |
(PMID:31281713) |
RGD |
PMID:31281713 |
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NCBI chr10:34,525,517...34,536,670
Ensembl chr10:34,525,519...34,536,673
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Tax1bp1 |
Tax1 binding protein 1 |
involved_in |
ISO |
(PMID:28898289) |
RGD |
PMID:28898289 |
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NCBI chr 4:81,821,991...81,877,906
Ensembl chr 4:81,821,989...81,879,100
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Ticam2 |
TIR domain containing adaptor molecule 2 |
involved_in |
ISO |
(PMID:19412184) |
RGD |
PMID:19412184 |
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NCBI chr18:39,289,902...39,311,462
Ensembl chr18:39,294,453...39,311,462
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Trem2 |
triggering receptor expressed on myeloid cells 2 |
involved_in |
ISO |
(MGI:6152919|PMID:29407460), (MGI:6695864|PMID:31134514) |
RGD |
PMID:29407460 PMID:31134514 |
MGI:6152919 MGI:6695864 |
NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170
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Trim32 |
tripartite motif-containing 32 |
involved_in |
ISO |
(PMID:28898289) |
RGD |
PMID:28898289 |
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NCBI chr 5:79,005,139...79,016,615
Ensembl chr 5:78,999,389...79,022,018
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Cd14 |
CD14 molecule |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:5645195|PMID:24380872) |
UniProt RGD |
PMID:24380872 |
GO_REF:0000024 MGI:5645195 |
NCBI chr18:28,335,522...28,337,383
Ensembl chr18:28,335,340...28,337,261
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F2rl1 |
F2R like trypsin receptor 1 |
involved_in |
ISO |
(PMID:18622013) |
RGD |
PMID:18622013 |
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NCBI chr 2:26,772,274...26,785,226
Ensembl chr 2:26,772,278...26,785,226
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Hmgb1 |
high mobility group box 1 |
involved_in |
ISO |
(MGI:5788395|PMID:16267105) |
RGD |
PMID:16267105 |
MGI:5788395 |
NCBI chr12:5,972,950...5,979,658
Ensembl chr12:5,901,586...5,978,565 Ensembl chr16:5,901,586...5,978,565
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Ifi35 |
interferon-induced protein 35 |
involved_in |
ISO |
(PMID:29038465) |
RGD |
PMID:29038465 |
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NCBI chr10:86,381,023...86,389,279
Ensembl chr10:86,381,010...86,389,952
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Lbp |
lipopolysaccharide binding protein |
involved_in |
ISO IEA |
(PMID:11528597) GO_REF:0000107 |
RGD Ensembl |
PMID:11528597 |
GO_REF:0000107 |
NCBI chr 3:146,953,889...146,981,032
Ensembl chr 3:146,954,015...146,981,586
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Ltf |
lactotransferrin |
involved_in |
ISO |
(PMID:20345905) |
RGD |
PMID:20345905 |
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NCBI chr 8:110,999,948...111,022,795
Ensembl chr 8:110,999,948...111,022,795
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Ninj1 |
ninjurin 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:6694429|PMID:25860173) |
UniProt RGD |
PMID:25860173 |
GO_REF:0000024 MGI:6694429 |
NCBI chr17:15,452,804...15,461,684
Ensembl chr17:15,452,813...15,461,704
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Nr1h3 |
nuclear receptor subfamily 1, group H, member 3 |
involved_in |
ISO |
(PMID:18511497) |
RGD |
PMID:18511497 |
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NCBI chr 3:77,158,808...77,168,907
Ensembl chr 3:77,158,808...77,168,722
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Peli1 |
pellino E3 ubiquitin protein ligase 1 |
acts_upstream_of_or_within |
ISO |
MGI:4361448 (PMID:19734906) |
RGD |
PMID:19734906 |
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NCBI chr14:95,254,274...95,309,168
Ensembl chr14:95,254,589...95,308,285
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Ptpn22 |
protein tyrosine phosphatase, non-receptor type 22 |
involved_in |
ISO |
(PMID:23871208) (MGI:5562517|PMID:23871208) |
RGD |
PMID:23871208 |
MGI:5562517 |
NCBI chr 2:191,366,761...191,414,782
Ensembl chr 2:191,366,808...191,414,779
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Ticam2 |
TIR domain containing adaptor molecule 2 |
involved_in |
ISO |
(PMID:19412184) (PMID:22685567) |
RGD |
PMID:19412184 PMID:22685567 |
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NCBI chr18:39,289,902...39,311,462
Ensembl chr18:39,294,453...39,311,462
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Tirap |
TIR domain containing adaptor protein |
involved_in |
ISO |
(PMID:19509286) |
RGD |
PMID:19509286 |
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NCBI chr 8:33,531,724...33,548,508
Ensembl chr 8:33,531,725...33,547,432
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Wdfy1 |
WD repeat and FYVE domain containing 1 |
involved_in |
ISO IBA |
(PMID:25736436) GO_REF:0000033 (MGI:5688815|PMID:25736436) |
RGD GO_Central |
PMID:25736436 |
GO_REF:0000033 MGI:5688815 |
NCBI chr 9:81,034,852...81,092,823
Ensembl chr 9:81,034,849...81,092,775
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Znrf1 |
zinc and ring finger 1 |
involved_in |
ISO |
(PMID:28593998) |
RGD |
PMID:28593998 |
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NCBI chr19:39,496,414...39,581,600
Ensembl chr19:39,496,527...39,580,969
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Appl1 |
adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 |
involved_in |
ISO |
(MGI:6270783|PMID:27219021) |
RGD |
PMID:27219021 |
MGI:6270783 |
NCBI chr16:2,118,503...2,166,741
Ensembl chr16:2,121,255...2,166,692
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Appl2 |
adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 |
involved_in |
ISO |
(MGI:6270783|PMID:27219021) |
RGD |
PMID:27219021 |
MGI:6270783 |
NCBI chr 7:20,135,248...20,184,757
Ensembl chr 7:20,135,375...20,184,754
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Flot1 |
flotillin 1 |
NOT|involved_in |
ISO |
(PMID:25204797) |
RGD |
PMID:25204797 |
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NCBI chr20:2,917,864...2,927,993
Ensembl chr20:2,917,137...2,927,978
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Pik3r1 |
phosphoinositide-3-kinase regulatory subunit 1 |
involved_in |
ISO IEA |
(PMID:19289601) GO_REF:0000107 |
RGD Ensembl |
PMID:19289601 |
GO_REF:0000107 |
NCBI chr 2:32,878,942...32,963,668
Ensembl chr 2:32,882,032...32,963,631
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Tirap |
TIR domain containing adaptor protein |
involved_in |
ISO |
(PMID:11544529) |
RGD |
PMID:11544529 |
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NCBI chr 8:33,531,724...33,548,508
Ensembl chr 8:33,531,725...33,547,432
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Prkce |
protein kinase C, epsilon |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (MGI:3652658|PMID:16757566) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:16757566 |
GO_REF:0000024 GO_REF:0000107 MGI:3652658 |
NCBI chr 6:7,965,048...8,451,966
Ensembl chr 6:7,965,048...8,451,719
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G |
Rab11fip2 |
RAB11 family interacting protein 2 |
involved_in |
ISO |
(PMID:30883606) |
RGD |
PMID:30883606 |
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NCBI chr 1:258,950,535...259,094,555
Ensembl chr 1:258,923,873...259,093,752
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G |
Ticam2 |
TIR domain containing adaptor molecule 2 |
involved_in |
ISO |
(PMID:22685567) (PMID:19412184) |
RGD |
PMID:19412184 PMID:22685567 |
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NCBI chr18:39,289,902...39,311,462
Ensembl chr18:39,294,453...39,311,462
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Term paths to the root
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