positive regulation of double-strand break repair - Ontology Report

(MGI:6867129|PMID:25066234), (MGI:6867148|PMID:16932743)

NCBI chr 5:142,888,870...142,892,509
Ensembl chr 5:142,888,870...142,892,509

Actl6a

actin-like 6A

involved_in

(MGI:6867129|PMID:25066234), (MGI:6867148|PMID:16932743)

NCBI chr 3:32,762,695...32,781,122
Ensembl chr 3:32,760,447...32,781,122

Actl6b

actin-like 6B

involved_in

(MGI:6867129|PMID:25066234), (MGI:6867148|PMID:16932743)

NCBI chr 5:137,551,784...137,567,844
Ensembl chr 5:137,551,779...137,567,844

Arid1a

AT-rich interaction domain 1A

involved_in

(MGI:6867129|PMID:25066234), (MGI:6867148|PMID:16932743)

NCBI chr 4:133,406,319...133,484,682
Ensembl chr 4:133,406,319...133,484,080

Arid1b

AT-rich interaction domain 1B

involved_in

(MGI:6867148|PMID:16932743)

NCBI chr17:5,044,481...5,397,931
Ensembl chr17:5,044,607...5,397,931

Arid2

AT-rich interaction domain 2

involved_in

(MGI:6867129|PMID:25066234)

NCBI chr15:96,185,403...96,303,344
Ensembl chr15:96,185,399...96,302,873

Bcl7a

B cell CLL/lymphoma 7A

involved_in

(MGI:6867129|PMID:25066234)

NCBI chr 5:123,482,511...123,512,146
Ensembl chr 5:123,481,897...123,513,055

Bcl7b

B cell CLL/lymphoma 7B

involved_in

(MGI:6867129|PMID:25066234)

NCBI chr 5:135,197,226...135,210,706
Ensembl chr 5:135,197,137...135,210,709

Bcl7c

B cell CLL/lymphoma 7C

involved_in

(MGI:6867129|PMID:25066234)

NCBI chr 7:127,260,626...127,307,938
Ensembl chr 7:127,260,628...127,308,105

Brd7

bromodomain containing 7

involved_in

(MGI:6867129|PMID:25066234)

NCBI chr 8:89,056,522...89,089,249
Ensembl chr 8:89,057,667...89,088,822

Ddx11

DEAD/H box helicase 11

involved_in

(PMID:23797032)

PMID:23797032

NCBI chr17:66,430,508...66,459,169
Ensembl chr17:66,430,515...66,459,169

Dpf1

double PHD fingers 1

involved_in

(MGI:6867148|PMID:16932743)

NCBI chr 7:29,003,366...29,017,017
Ensembl chr 7:29,003,376...29,017,668

Dpf2

double PHD fingers 2

involved_in

(MGI:6867129|PMID:25066234)

NCBI chr19:5,946,544...5,962,899
Ensembl chr19:5,946,544...5,963,038

Dpf3

double PHD fingers 3

involved_in

(MGI:6867148|PMID:16932743)

NCBI chr12:83,260,525...83,534,510
Ensembl chr12:83,260,519...83,534,490

Fmn2

formin 2

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr 1:174,324,079...174,650,295
Ensembl chr 1:174,329,391...174,650,295

Foxm1

forkhead box M1

involved_in

IMP
ISO

(MGI:3698692|PMID:17101782)

PMID:17101782

GO_REF:0000119 MGI:3698692 MGI:4834177

NCBI chr 6:128,339,957...128,352,849
Ensembl chr 6:128,339,930...128,353,109

Khdc3

KH domain containing 3, subcortical maternal complex member

involved_in

(MGI:6467697|PMID:29125140), (MGI:6716977|PMID:33115731)

PMID:29125140 PMID:33115731

MGI:6467697 MGI:6716977

NCBI chr 9:73,008,660...73,013,915
Ensembl chr 9:73,009,118...73,011,720

Mgmt

O-6-methylguanine-DNA methyltransferase

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr 7:136,496,315...136,732,001
Ensembl chr 7:136,496,343...136,731,995

Ooep

oocyte expressed protein

involved_in

(MGI:6467697|PMID:29125140)

PMID:29125140

MGI:6467697

NCBI chr 9:78,284,185...78,285,870
Ensembl chr 9:78,283,391...78,286,007

Pbrm1

polybromo 1

involved_in

(MGI:6867129|PMID:25066234)

NCBI chr14:30,741,095...30,843,549
Ensembl chr14:30,741,095...30,843,549

Phf10

PHD finger protein 10

involved_in

(MGI:6867129|PMID:25066234), (MGI:6867148|PMID:16932743)

NCBI chr17:15,165,269...15,181,550
Ensembl chr17:15,165,271...15,181,535

Sirt1

sirtuin 1

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr10:63,154,784...63,174,814
Ensembl chr10:63,154,784...63,217,483

Sirt6

sirtuin 6

involved_in

IDA
ISO

(MGI:7258357|PMID:31002797)

PMID:31002797

GO_REF:0000119 MGI:4834177 MGI:7258357

NCBI chr10:81,457,621...81,463,631
Ensembl chr10:81,457,619...81,463,631

Slf1

SMC5-SMC6 complex localization factor 1

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr13:77,191,207...77,283,632
Ensembl chr13:77,191,207...77,283,592

Slf2

SMC5-SMC6 complex localization factor 2

involved_in

ISO
IBA

MGI
GO_Central

GO_REF:0000033 GO_REF:0000119 MGI:4834177

NCBI chr19:44,906,948...44,972,225
Ensembl chr19:44,919,558...44,972,225

Smarca2

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2

involved_in

(MGI:6867148|PMID:16932743)

NCBI chr19:26,582,578...26,755,721
Ensembl chr19:26,582,450...26,755,722

Smarca4

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4

involved_in

(MGI:6867129|PMID:25066234), (MGI:6867148|PMID:16932743)

NCBI chr 9:21,527,377...21,615,526
Ensembl chr 9:21,527,465...21,615,526

Smarcb1

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1

involved_in

(MGI:6867129|PMID:25066234), (MGI:6867148|PMID:16932743)

NCBI chr10:75,732,603...75,757,448
Ensembl chr10:75,732,603...75,757,451

Smarcc1

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1

involved_in

(MGI:6867129|PMID:25066234), (MGI:6867148|PMID:16932743)

NCBI chr 9:109,961,129...110,069,773
Ensembl chr 9:109,946,776...110,069,246

Smarcc2

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2

involved_in

(MGI:6867129|PMID:25066234), (MGI:6867148|PMID:16932743)

NCBI chr10:128,294,823...128,326,460
Ensembl chr10:128,295,117...128,326,351

Smarcd1

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1

involved_in

(MGI:6867129|PMID:25066234), (MGI:6867148|PMID:16932743)

NCBI chr15:99,600,175...99,611,872
Ensembl chr15:99,600,010...99,611,872

Smarcd2

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2

involved_in

(MGI:6867129|PMID:25066234), (MGI:6867148|PMID:16932743)

NCBI chr11:106,153,997...106,163,810
Ensembl chr11:106,154,005...106,163,798

Smarcd3

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3

involved_in

(MGI:6867148|PMID:16932743)

NCBI chr 5:24,797,620...24,829,649
Ensembl chr 5:24,795,816...24,829,409

Smarce1

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1

involved_in

(MGI:6867129|PMID:25066234), (MGI:6867148|PMID:16932743)

NCBI chr11:99,099,873...99,121,843
Ensembl chr11:99,099,873...99,121,843

Spidr

scaffolding protein involved in DNA repair

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr16:15,707,088...15,964,715
Ensembl chr16:15,707,088...15,964,715

Spire1

spire type actin nucleation factor 1

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr18:67,621,279...67,745,880
Ensembl chr18:67,621,279...67,743,860

Spire2

spire type actin nucleation factor 2

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr 8:124,059,452...124,096,257
Ensembl chr 8:124,059,452...124,096,254

Timeless

timeless circadian clock 1

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr10:128,067,932...128,088,810
Ensembl chr10:128,067,934...128,088,810

Ube2n

ubiquitin-conjugating enzyme E2N

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr10:95,351,024...95,381,520
Ensembl chr10:95,351,007...95,381,519

Ube2v2

ubiquitin-conjugating enzyme E2 variant 2

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr16:15,368,850...15,412,382
Ensembl chr16:15,369,941...15,413,637

Wrap53

WD repeat containing, antisense to Trp53

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr11:69,452,580...69,471,076
Ensembl chr11:69,452,584...69,471,081

Zcwpw1

zinc finger, CW type with PWWP domain 1

involved_in

PMID:31453335 PMID:32352380 PMID:32374261 PMID:32744506

(MGI:6358520|PMID:31453335), (MGI:6442007|PMID:32374261), (MGI:6443266|PMID:32352380), (MGI:6467709|PMID:32744506)

ARUK-UCL

MGI:6358520 MGI:6442007 MGI:6443266 MGI:6467709

NCBI chr 5:137,785,593...137,820,883
Ensembl chr 5:137,786,060...137,820,883

positive regulation of double-strand break repair via homologous recombination

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Actb

actin, beta

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr 5:142,888,870...142,892,509
Ensembl chr 5:142,888,870...142,892,509

Actl6a

actin-like 6A

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr 3:32,762,695...32,781,122
Ensembl chr 3:32,760,447...32,781,122

Actr2

actin related protein 2

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr11:20,012,304...20,062,951
Ensembl chr11:20,012,304...20,062,913

Arid2

AT-rich interaction domain 2

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr15:96,185,403...96,303,344
Ensembl chr15:96,185,399...96,302,873

Blm

Bloom syndrome, RecQ like helicase

acts_upstream_of_or_within

IGI

(PMID:25520194)

PMID:25520194

NCBI chr 7:80,104,839...80,184,896
Ensembl chr 7:80,104,481...80,184,867

Brd8

bromodomain containing 8

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr18:34,731,668...34,757,916
Ensembl chr18:34,731,668...34,757,654

Crebbp

CREB binding protein

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr16:3,899,198...4,031,864
Ensembl chr16:3,899,192...4,031,861

Dmap1

DNA methyltransferase 1-associated protein 1

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr 4:117,531,878...117,539,450
Ensembl chr 4:117,531,878...117,539,470

Ep400

E1A binding protein p400

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr 5:110,812,239...110,918,583
Ensembl chr 5:110,812,239...110,918,583

Epc1

enhancer of polycomb homolog 1

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr18:6,435,951...6,516,108
Ensembl chr18:6,435,951...6,516,108

Epc2

enhancer of polycomb homolog 2

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr 2:49,341,498...49,441,954
Ensembl chr 2:49,341,498...49,441,960

Ercc6

excision repair cross-complementing rodent repair deficiency, complementation group 6

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr14:32,235,248...32,302,947
Ensembl chr14:32,235,478...32,302,947

Fancb

Fanconi anemia, complementation group B

acts_upstream_of_or_within
involved_in

IGI
IBA

(PMID:25520194)

MGI
GO_Central

PMID:25520194

GO_REF:0000033

NCBI chr X:163,763,678...163,780,266
Ensembl chr X:163,763,588...163,780,268

Fus

fused in sarcoma

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr 7:127,565,276...127,581,204
Ensembl chr 7:127,566,629...127,584,873

Hdgfl2

HDGF like 2

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr17:56,386,661...56,407,605
Ensembl chr17:56,386,634...56,407,607

Helq

helicase, POLQ-like

involved_in

IDA

(MGI:5547892|PMID:24005329)

PMID:24005329

MGI:5547892

NCBI chr 5:100,910,010...100,946,529
Ensembl chr 5:100,910,011...100,946,464

Ing3

inhibitor of growth family, member 3

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr 6:21,948,002...21,976,037
Ensembl chr 6:21,949,570...21,976,037

Kat5

K(lysine) acetyltransferase 5

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr19:5,653,042...5,661,584
Ensembl chr19:5,653,042...5,660,265

Khdc3

KH domain containing 3, subcortical maternal complex member

involved_in

IMP
ISO

(MGI:6716962|PMID:25936915)

PMID:25936915

GO_REF:0000119 MGI:4834177 MGI:6716962

NCBI chr 9:73,008,660...73,013,915
Ensembl chr 9:73,009,118...73,011,720

Mbtd1

mbt domain containing 1

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr11:93,776,635...93,837,815
Ensembl chr11:93,776,678...93,837,811

Meaf6

MYST/Esa1-associated factor 6

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr 4:124,978,883...125,007,031
Ensembl chr 4:124,978,927...125,007,031

Morf4l1

mortality factor 4 like 1

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr 9:89,973,722...89,996,873
Ensembl chr 9:89,973,718...89,996,827

Morf4l2

mortality factor 4 like 2

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr X:135,633,691...135,644,435
Ensembl chr X:135,633,691...135,644,439

Mrgbp

MRG/MORF4L binding protein

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr 2:180,222,990...180,228,097
Ensembl chr 2:180,223,097...180,228,097

Mrnip

MRN complex interacting protein

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr11:50,065,678...50,090,943
Ensembl chr11:50,065,271...50,090,942

Ooep

oocyte expressed protein

involved_in

(MGI:6272426|PMID:29955025)

PMID:29955025

MGI:6272426

NCBI chr 9:78,284,185...78,285,870
Ensembl chr 9:78,283,391...78,286,007

Parp1

poly (ADP-ribose) polymerase family, member 1

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr 1:180,396,456...180,428,564
Ensembl chr 1:180,396,489...180,428,819

Peli1

pellino 1

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr11:21,041,283...21,100,327
Ensembl chr11:21,041,291...21,100,323

Pias4

protein inhibitor of activated STAT 4

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr10:80,989,795...81,003,554
Ensembl chr10:80,989,100...81,003,757

Prmt1

protein arginine N-methyltransferase 1

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr 7:44,626,179...44,635,844
Ensembl chr 7:44,625,413...44,635,992

Rad51ap1

RAD51 associated protein 1

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr 6:126,900,378...126,916,664
Ensembl chr 6:126,900,013...126,916,550

Rnf126

ring finger protein 126

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr10:79,594,349...79,607,282
Ensembl chr10:79,594,349...79,602,786

Rnf8

ring finger protein 8

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr17:29,833,763...29,860,638
Ensembl chr17:29,833,764...29,863,965

Ruvbl1

RuvB-like AAA ATPase 1

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr 6:88,442,391...88,474,548
Ensembl chr 6:88,442,391...88,474,554

Ruvbl2

RuvB-like AAA ATPase 2

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr 7:45,071,320...45,084,817
Ensembl chr 7:45,071,184...45,087,520

Skp2

S-phase kinase-associated protein 2

involved_in

IDA
ISO

(MGI:5438910|PMID:22464731)

PMID:22464731

GO_REF:0000119 MGI:4834177 MGI:5438910

NCBI chr15:9,112,070...9,155,512
Ensembl chr15:9,112,073...9,155,512

Timeless

timeless circadian clock 1

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr10:128,067,932...128,088,810
Ensembl chr10:128,067,934...128,088,810

Trrap

transformation/transcription domain-associated protein

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr 5:144,704,547...144,796,588
Ensembl chr 5:144,704,542...144,796,588

Vps72

vacuolar protein sorting 72

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr 3:95,018,353...95,030,362
Ensembl chr 3:95,018,333...95,030,362

Was

Wiskott-Aldrich syndrome

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr X:7,947,705...7,956,730
Ensembl chr X:7,947,692...7,956,737

Wdr48

WD repeat domain 48

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr 9:119,723,961...119,755,652
Ensembl chr 9:119,723,944...119,755,653

Wrap53

WD repeat containing, antisense to Trp53

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr11:69,452,580...69,471,076
Ensembl chr11:69,452,584...69,471,081

Yeats4

YEATS domain containing 4

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr10:117,051,046...117,060,412
Ensembl chr10:117,051,126...117,060,412

positive regulation of double-strand break repair via nonhomologous end joining

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Fh1

fumarate hydratase 1

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr 1:175,428,944...175,453,201
Ensembl chr 1:175,427,940...175,453,201

Kdm4d

lysine (K)-specific demethylase 4D

acts_upstream_of_or_within

(PMID:24550317)

PMID:24550317

NCBI chr 9:14,373,844...14,411,818
Ensembl chr 9:14,373,844...14,411,778

Kmt5b

lysine methyltransferase 5B

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr19:3,816,436...3,868,303
Ensembl chr19:3,817,421...3,868,303

Kmt5c

lysine methyltransferase 5C

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr 7:4,743,091...4,750,513
Ensembl chr 7:4,743,114...4,750,513

Mad2l2

MAD2 mitotic arrest deficient-like 2

involved_in

NAS
ISO

(MGI:6156517|PMID:29656893)

ComplexPortal
MGI

GO_REF:0000119 MGI:4834177 MGI:6156517

NCBI chr 4:148,214,615...148,230,161
Ensembl chr 4:148,214,841...148,230,156

Parp3

poly (ADP-ribose) polymerase family, member 3

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr 9:106,347,521...106,354,148
Ensembl chr 9:106,347,521...106,354,148

Pnkp

polynucleotide kinase 3'- phosphatase

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr 7:44,505,903...44,514,761
Ensembl chr 7:44,506,563...44,512,416

Prkdc

protein kinase, DNA activated, catalytic polypeptide

involved_in

PMID:23306437 PMID:23333305

GO_REF:0000119 MGI:4834177

NCBI chr16:15,455,698...15,660,103
Ensembl chr16:15,455,730...15,660,099

Rif1

replication timing regulatory factor 1

involved_in

IMP
ISO

(MGI:5468037|PMID:23306437), (MGI:5476381|PMID:23333305)

CACAO
MGI

GO_REF:0000119 MGI:4834177 MGI:5468037 MGI:5476381

NCBI chr 2:51,962,725...52,016,781
Ensembl chr 2:51,962,844...52,012,395

Setmar

SET domain without mariner transposase fusion

involved_in

ComplexPortal
MGI
GO_Central

GO_REF:0000119 MGI:4834177

NCBI chr 6:108,042,006...108,054,088
Ensembl chr 6:108,042,006...108,054,083

Shld1

shieldin complex subunit 1

involved_in

NAS
ISO
IBA

(MGI:6156517|PMID:29656893)

GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:6156517

NCBI chr 2:132,528,871...132,592,975
Ensembl chr 2:132,528,851...132,592,975

Shld2

shieldin complex subunit 2

involved_in

NAS
ISO

(MGI:6156517|PMID:29656893)

ComplexPortal
MGI

ComplexPortal
MGI
GO_Central

GO_REF:0000119 MGI:4834177 MGI:6156517

NCBI chr14:33,958,905...34,032,528
Ensembl chr14:33,958,990...34,032,450

Shld3

shieldin complex subunit 3

involved_in

NAS
ISO
IBA

(MGI:6156517|PMID:29656893)

GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:6156517

NCBI chr13:104,310,228...104,314,967
Ensembl chr13:104,310,230...104,314,947

Smchd1

SMC hinge domain containing 1

involved_in

GO_REF:0000119 MGI:4834177

NCBI chr17:71,651,484...71,782,361
Ensembl chr17:71,651,484...71,782,338

Top2b

topoisomerase (DNA) II beta

NCBI chr14:6,038,976...6,104,585
Ensembl chr14:6,034,301...6,104,584

Wrap53

WD repeat containing, antisense to Trp53

involved_in