Tp53inp1 (tumor protein p53 inducible nuclear protein 1) - Rat Genome Database

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Gene: Tp53inp1 (tumor protein p53 inducible nuclear protein 1) Rattus norvegicus
Analyze
Symbol: Tp53inp1
Name: tumor protein p53 inducible nuclear protein 1
RGD ID: 631423
Description: Predicted to enable antioxidant activity. Predicted to be involved in several processes, including autophagic cell death; negative regulation of myofibroblast differentiation; and regulation of gene expression. Predicted to act upstream of or within several processes, including cellular response to ethanol; cellular response to hydroperoxide; and cellular response to methyl methanesulfonate. Predicted to be located in cytosol. Predicted to be active in autophagosome and nucleus. Orthologous to human TP53INP1 (tumor protein p53 inducible nuclear protein 1); INTERACTS WITH (+)-schisandrin B; 17alpha-ethynylestradiol; 17beta-estradiol.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: p53-dependent damage-inducible nuclear protein 1; p53DINP1; Stinp; stress induced protein; stress-induced protein; TEAP; thymus-expressed acidic protein; transformation related protein 53 inducible nuclear protein 1; Trp53inp1; tumor protein p53-inducible nuclear protein 1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8529,051,267 - 29,069,486 (+)NCBIGRCr8
mRatBN7.2524,253,986 - 24,272,250 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl524,260,568 - 24,267,968 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx526,442,178 - 26,460,439 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0528,035,197 - 28,053,458 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0527,836,039 - 27,854,314 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0524,402,895 - 24,419,651 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl524,410,863 - 24,416,888 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0529,128,794 - 29,144,271 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4525,008,253 - 25,014,263 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1524,729,972 - 25,014,263 (+)NCBI
Celera523,480,259 - 23,486,276 (+)NCBICelera
Cytogenetic Map5q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (EXP)
(-)-demecolcine  (ISO)
(S)-nicotine  (ISO)
1,2-dichloroethane  (ISO)
1,2-dimethylhydrazine  (ISO)
1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine  (ISO)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (EXP,ISO)
1H-pyrazole  (ISO)
2,3',4,4',5-Pentachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (ISO)
2,4-dinitrotoluene  (EXP)
2,6-dinitrotoluene  (EXP)
2-acetamidofluorene  (EXP,ISO)
3,3',4,4',5-pentachlorobiphenyl  (EXP)
3,4-methylenedioxymethamphetamine  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
4-hydroxynon-2-enal  (ISO)
4-hydroxyphenyl retinamide  (ISO)
4-nitrophenol  (ISO)
4-vinylcyclohexene dioxide  (ISO)
5-aza-2'-deoxycytidine  (ISO)
5-fluorouracil  (ISO)
6-propyl-2-thiouracil  (EXP)
7,12-dimethyltetraphene  (ISO)
actinomycin D  (ISO)
adefovir pivoxil  (ISO)
afimoxifene  (ISO)
aflatoxin B1  (EXP,ISO)
all-trans-retinoic acid  (ISO)
amitrole  (EXP)
ammonium chloride  (EXP)
arsane  (ISO)
arsenic atom  (ISO)
arsenic trichloride  (ISO)
arsenous acid  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[b]fluoranthene  (ISO)
bis(2-chloroethyl) sulfide  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
buta-1,3-diene  (ISO)
cadmium dichloride  (ISO)
camptothecin  (ISO)
cannabidiol  (ISO)
carbamazepine  (ISO)
carbon nanotube  (ISO)
carbonyl sulfide  (EXP)
CGP 52608  (ISO)
chlorendic acid  (EXP)
chloroacetaldehyde  (ISO)
chloroethene  (ISO)
chloroprene  (ISO)
chromium(6+)  (ISO)
chrysene  (ISO)
cidofovir anhydrous  (ISO)
ciguatoxin CTX1B  (ISO)
cisplatin  (ISO)
clodronic acid  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
crocidolite asbestos  (ISO)
Cuprizon  (EXP)
cyclosporin A  (EXP)
DDE  (ISO)
DDT  (EXP)
decabromodiphenyl ether  (EXP)
deoxynivalenol  (ISO)
dexamethasone  (ISO)
diarsenic trioxide  (ISO)
dibenz[a,h]anthracene  (ISO)
Dibutyl phosphate  (ISO)
dibutyl phthalate  (ISO)
diclofenac  (ISO)
dicrotophos  (ISO)
dimethylarsinous acid  (ISO)
dioxygen  (ISO)
disodium selenite  (ISO)
doxorubicin  (ISO)
doxycycline  (ISO)
Enterolactone  (ISO)
epoxiconazole  (ISO)
ethanol  (ISO)
ethyl methanesulfonate  (ISO)
fenofibrate  (EXP,ISO)
ferric oxide  (ISO)
fluvastatin  (ISO)
folic acid  (ISO)
formaldehyde  (ISO)
FR900359  (ISO)
furan  (EXP,ISO)
gemcitabine  (ISO)
genistein  (ISO)
gentamycin  (EXP)
hydrogen cyanide  (ISO)
hydrogen peroxide  (ISO)
hydroquinone  (ISO)
hydroxyurea  (ISO)
ibuprofen  (ISO)
ifosfamide  (ISO)
irinotecan  (ISO)
isoprenaline  (ISO)
lucanthone  (ISO)
metformin  (EXP,ISO)
methimazole  (EXP)
methotrexate  (ISO)
methyl methanesulfonate  (ISO)
methylmercury chloride  (ISO)
N(4)-hydroxycytidine  (ISO)
N-methyl-N-nitrosourea  (ISO)
N-nitrosodiethylamine  (EXP,ISO)
nicotine  (ISO)
Nutlin-3  (ISO)
ochratoxin A  (ISO)
oxaliplatin  (EXP)
ozone  (ISO)
paracetamol  (EXP,ISO)
paraquat  (EXP,ISO)
perfluorooctanoic acid  (EXP)
phenformin  (EXP)
phenobarbital  (ISO)
pirinixic acid  (ISO)
potassium bromate  (ISO)
potassium chromate  (ISO)
potassium cyanide  (ISO)
pregnenolone 16alpha-carbonitrile  (EXP,ISO)
quercetin  (ISO)
raloxifene  (ISO)
resveratrol  (ISO)
rotenone  (EXP)
silicon dioxide  (ISO)
sodium arsenite  (ISO)
succimer  (ISO)
sulfadimethoxine  (EXP)
sunitinib  (ISO)
tamoxifen  (ISO)
temozolomide  (ISO)
testosterone  (EXP)
tetrachloromethane  (EXP,ISO)
tetraphene  (ISO)
thioacetamide  (EXP)
titanium dioxide  (ISO)
topotecan  (EXP)
tremolite asbestos  (ISO)
trichloroethene  (EXP)
trichostatin A  (ISO)
triphenyl phosphate  (ISO)
triptonide  (ISO)
tris(2-butoxyethyl) phosphate  (ISO)
troglitazone  (ISO)
trovafloxacin  (ISO)
tunicamycin  (ISO)
urethane  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)
vincristine  (ISO)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
autophagosome  (IBA,IEA,ISO,ISS)
cytoplasmic vesicle  (IEA)
cytosol  (IEA,ISO,ISS)
nucleolus  (ISO)
nucleus  (IBA,ISO,ISS)
PML body  (IEA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. GOA pipeline RGD automated data pipeline
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
5. Information Derived from GenBank Report RGD, Sept. 2003
6. TP53INP1s and homeodomain-interacting protein kinase-2 (HIPK2) are partners in regulating p53 activity. Tomasini R, etal., J Biol Chem 2003 Sep 26;278(39):37722-9. Epub 2003 Jul 7.
Additional References at PubMed
PMID:11557757   PMID:16044147   PMID:19118006   PMID:21339733   PMID:21965303   PMID:22421968   PMID:22470510   PMID:26589288   PMID:27105917   PMID:30193876  


Genomics

Comparative Map Data
Tp53inp1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8529,051,267 - 29,069,486 (+)NCBIGRCr8
mRatBN7.2524,253,986 - 24,272,250 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl524,260,568 - 24,267,968 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx526,442,178 - 26,460,439 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0528,035,197 - 28,053,458 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0527,836,039 - 27,854,314 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0524,402,895 - 24,419,651 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl524,410,863 - 24,416,888 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0529,128,794 - 29,144,271 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4525,008,253 - 25,014,263 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1524,729,972 - 25,014,263 (+)NCBI
Celera523,480,259 - 23,486,276 (+)NCBICelera
Cytogenetic Map5q13NCBI
TP53INP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38894,925,972 - 94,949,378 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl894,925,972 - 94,949,378 (-)EnsemblGRCh38hg38GRCh38
GRCh37895,938,200 - 95,961,606 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36896,007,377 - 96,030,767 (-)NCBINCBI36Build 36hg18NCBI36
Build 34896,007,376 - 96,030,767NCBI
Celera892,123,395 - 92,146,810 (-)NCBICelera
Cytogenetic Map8q22.1NCBI
HuRef891,146,079 - 91,169,530 (-)NCBIHuRef
CHM1_1895,978,531 - 96,001,887 (-)NCBICHM1_1
T2T-CHM13v2.0896,050,944 - 96,074,374 (-)NCBIT2T-CHM13v2.0
Trp53inp1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39411,156,441 - 11,174,379 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl411,156,431 - 11,174,379 (+)EnsemblGRCm39 Ensembl
GRCm38411,156,441 - 11,174,379 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl411,156,431 - 11,174,379 (+)EnsemblGRCm38mm10GRCm38
MGSCv37411,083,588 - 11,101,524 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36411,083,588 - 11,101,524 (+)NCBIMGSCv36mm8
Celera410,967,133 - 10,985,072 (+)NCBICelera
Cytogenetic Map4A1NCBI
cM Map45.03NCBI
Tp53inp1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541711,067,715 - 11,073,635 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541711,063,217 - 11,079,389 (-)NCBIChiLan1.0ChiLan1.0
TP53INP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v27112,254,866 - 112,278,331 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1887,791,887 - 87,817,232 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0891,545,655 - 91,569,535 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1893,747,162 - 93,767,196 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl893,747,162 - 93,767,196 (-)Ensemblpanpan1.1panPan2
TP53INP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12939,575,782 - 39,593,389 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2939,580,496 - 39,593,518 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2939,737,342 - 39,755,264 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02939,779,940 - 39,797,257 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2939,781,168 - 39,790,256 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12939,805,773 - 39,819,363 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02939,787,781 - 39,805,733 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02940,229,451 - 40,247,160 (-)NCBIUU_Cfam_GSD_1.0
Tp53inp1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530339,896,536 - 39,911,591 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365447,881,102 - 7,891,463 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365447,882,710 - 7,891,668 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TP53INP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl441,747,654 - 41,766,685 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1441,747,654 - 41,766,688 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2445,000,130 - 45,015,123 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TP53INP1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1889,893,531 - 89,918,054 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl889,893,419 - 89,908,228 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603950,916,705 - 50,940,375 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tp53inp1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247632,277,794 - 2,296,423 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247632,278,751 - 2,297,149 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Tp53inp1
42 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:45
Count of miRNA genes:40
Interacting mature miRNAs:45
Transcripts:ENSRNOT00000010591
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2293666Bmd38Bone mineral density QTL 384.4femur size trait (VT:1000369)femoral neck cortical cross-sectional area (CMO:0001702)5894822853948228Rat
1576314Eutr1Estrogen induced uterine response QTL 1uterus integrity trait (VT:0010575)pyometritis severity score (CMO:0002009)52138965166875058Rat
70212Niddm25Non-insulin dependent diabetes mellitus QTL 253.54blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)51131345958Rat
1358353Srcrtb2Stress Responsive Cort Basal QTL 23.480.003blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)51887394774251464Rat
1300117Hrtrt8Heart rate QTL 83.49heart pumping trait (VT:2000009)heart rate (CMO:0000002)5384401847869213Rat
7394712Emca13Estrogen-induced mammary cancer QTL 13mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)5982326699753708Rat
634305Mamtr1Mammary tumor resistance QTL 10.0001mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)512789751113558310Rat
1331771Rf35Renal function QTL 354.36965kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)572947086724018Rat
2312562Pur18Proteinuria QTL 182.60.001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)5213896532656739Rat
8662454Vetf3Vascular elastic tissue fragility QTL 327.4artery integrity trait (VT:0010639)number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)5228222669540447Rat
61462Niddm10Non-insulin dependent diabetes mellitus QTL 103.90.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)5511215947171491Rat
1641903Alcrsp3Alcohol response QTL 3response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)51268928557689285Rat
1331756Rf34Renal function QTL 344.16275kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)5190450412Rat
8552954Pigfal14Plasma insulin-like growth factor 1 level QTL 149blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)52122674466226744Rat
2313085Bss59Bone structure and strength QTL 592.90.0001long bone metaphysis morphology trait (VT:0000133)tibia midshaft total cross-sectional area (CMO:0001715)5384401826141981Rat
1600358Mamtr5Mammary tumor resistance QTL 5mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)51887394763873947Rat

Markers in Region
RH142723  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2524,265,627 - 24,265,738 (+)MAPPERmRatBN7.2
Rnor_6.0524,414,549 - 24,414,659NCBIRnor6.0
Rnor_5.0529,140,461 - 29,140,571UniSTSRnor5.0
RGSC_v3.4525,011,924 - 25,012,034UniSTSRGSC3.4
Celera523,483,937 - 23,484,047UniSTS
RH 3.4 Map5142.0UniSTS
Cytogenetic Map5q13UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31

Sequence


Ensembl Acc Id: ENSRNOT00000010591   ⟹   ENSRNOP00000010591
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl524,261,976 - 24,267,968 (+)Ensembl
Rnor_6.0 Ensembl524,410,863 - 24,416,888 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000116994   ⟹   ENSRNOP00000092415
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl524,260,568 - 24,263,362 (+)Ensembl
RefSeq Acc Id: NM_181084   ⟹   NP_851598
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8529,051,267 - 29,069,486 (+)NCBI
mRatBN7.2524,254,035 - 24,272,250 (+)NCBI
Rnor_6.0524,410,871 - 24,416,888 (+)NCBI
Rnor_5.0529,128,794 - 29,144,271 (+)NCBI
RGSC_v3.4525,008,253 - 25,014,263 (+)RGD
Celera523,480,259 - 23,486,276 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008763529   ⟹   XP_008761751
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8529,059,281 - 29,064,922 (+)NCBI
mRatBN7.2524,253,986 - 24,267,681 (+)NCBI
Rnor_6.0524,402,907 - 24,416,550 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017593226   ⟹   XP_017448715
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8529,059,281 - 29,063,445 (+)NCBI
mRatBN7.2524,253,986 - 24,265,772 (+)NCBI
Rnor_6.0524,402,907 - 24,414,692 (+)NCBI
Sequence:
RefSeq Acc Id: XM_063287281   ⟹   XP_063143351
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8529,059,281 - 29,061,231 (+)NCBI
RefSeq Acc Id: NP_851598   ⟸   NM_181084
- UniProtKB: Q80YE2 (UniProtKB/Swiss-Prot),   G3V708 (UniProtKB/TrEMBL),   A6JFS6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008761751   ⟸   XM_008763529
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_017448715   ⟸   XM_017593226
- Peptide Label: isoform X2
- Sequence:
Ensembl Acc Id: ENSRNOP00000010591   ⟸   ENSRNOT00000010591
Ensembl Acc Id: ENSRNOP00000092415   ⟸   ENSRNOT00000116994
RefSeq Acc Id: XP_063143351   ⟸   XM_063287281
- Peptide Label: isoform X1
- UniProtKB: A0A8I6AHT6 (UniProtKB/TrEMBL)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q80YE2-F1-model_v2 AlphaFold Q80YE2 1-239 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:631423 AgrOrtholog
BioCyc Gene G2FUF-41962 BioCyc
Ensembl Genes ENSRNOG00000007964 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000010591.5 UniProtKB/TrEMBL
  ENSRNOT00000116994.1 UniProtKB/TrEMBL
InterPro TP53INP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:297822 UniProtKB/Swiss-Prot
NCBI Gene 297822 ENTREZGENE
PANTHER PTHR31671 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR31671:SF0 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam DOR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Tp53inp1 PhenoGen
RatGTEx ENSRNOG00000007964 RatGTEx
UniProt A0A8I6AHT6 ENTREZGENE, UniProtKB/TrEMBL
  A6JFS6 ENTREZGENE, UniProtKB/TrEMBL
  G3V708 ENTREZGENE, UniProtKB/TrEMBL
  Q80YE2 ENTREZGENE, UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-10-23 Tp53inp1  tumor protein p53 inducible nuclear protein 1  Trp53inp1  transformation related protein 53 inducible nuclear protein 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2004-02-11 Trp53inp1  transformation related protein 53 inducible nuclear protein 1  Stinp  stress induced protein  Symbol and Name updated to reflect Human and Mouse nomenclature 625702 APPROVED