LOC120094646 (uncharacterized LOC120094646) - Rat Genome Database

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Gene: LOC120094646 (uncharacterized LOC120094646) Rattus norvegicus
Analyze
Symbol: LOC120094646
Name: uncharacterized LOC120094646
RGD ID: 41309930
Description:
Type: ncrna
RefSeq Status: MODEL
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8928,199,909 - 28,211,192 (+)NCBIGRCr8GRCr8GRCr8
mRatBN7.2920,703,352 - 20,714,779 (+)NCBImRatBN7.2mRatBN7.2
Cytogenetic Map9q13NCBI
JBrowse:




References

Genomics

Variants

.
Variants in LOC120094646
101 total Variants

QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2303170Bp332Blood pressure QTL 3323.730.027arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)9671488884474983Rat
631211Bw4Body weight QTL45.31retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)9534647950346479Rat
2303559Gluco54Glucose level QTL 542blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)9875049253750492Rat
7207814Bmd91Bone mineral density QTL 913.5femur size trait (VT:1000369)femoral neck cross-sectional area (CMO:0001697)9131250552Rat
9589055Scfw5Subcutaneous fat weight QTL 55.550.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)949664545496645Rat
1641911Alcrsp13Alcohol response QTL 13response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)9621499551214995Rat
1354650Despr5Despair related QTL 54.010.0017locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)9875049253750492Rat
1300124Cm4Cardiac mass QTL 43.55heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)9141763315Rat
61425Cia15Collagen induced arthritis QTL 154.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)9534647950416711Rat
631643Bp120Blood pressure QTL 12030.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)9671488829567695Rat
9589158Gluco65Glucose level QTL 656.820.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)949664545496645Rat
1600365Mcs20Mammary carcinoma susceptibility QTL 203mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)92103143049025574Rat
7411592Foco8Food consumption QTL 87.40.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)949664545496645Rat
1298088Edpm11Estrogen-dependent pituitary mass QTL 112.5pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)9621499551214995Rat


Expression

RNA-SEQ Expression

mesenchyme
renal system
1 1

Sequence


RefSeq Acc Id: XR_005489058
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8928,199,909 - 28,211,192 (+)NCBI
mRatBN7.2920,703,352 - 20,714,779 (+)NCBI
RefSeq Acc Id: XR_005489059
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8928,199,909 - 28,211,192 (+)NCBI
mRatBN7.2920,703,352 - 20,714,779 (+)NCBI

Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-28061 BioCyc
NCBI Gene LOC120094646 ENTREZGENE
PhenoGen LOC120094646 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-01-27 LOC120094646  uncharacterized LOC120094646      Symbol and Name status set to provisional 70820 PROVISIONAL