Trnap-agg86 (transfer RNA proline (anticodon AGG) 86) - Rat Genome Database

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Gene: Trnap-agg86 (transfer RNA proline (anticodon AGG) 86) Rattus norvegicus
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Symbol: Trnap-agg86
Name: transfer RNA proline (anticodon AGG) 86
RGD ID: 41169374
Description: This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104).
Type: trna
RefSeq Status: MODEL
Previously known as: NEWGENE_40926764; transfer RNA proline (anticodon AGG); Trnap-agg
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr814100,721,577 - 100,721,651 (-)NCBIGRCr8
mRatBN7.21496,520,344 - 96,520,418 (-)NCBImRatBN7.2mRatBN7.2
Cytogenetic Map14q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631523Pia13Pristane induced arthritis QTL 133.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)144079346098037301Rat
2300197Scl59Serum cholesterol level QTL 59blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)1455147478100147478Rat
9590294Uminl4Urine mineral level QTL 45.660.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)1455624247100624247Rat
9589034Epfw11Epididymal fat weight QTL 1160.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)1455624247100624247Rat
2317879Alcrsp27Alcohol response QTL 273.30.63response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)1456631369101631369Rat
634328Hc5Hypercalciuria QTL 52.3urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)1458184885103184885Rat
1582259Gluco23Glucose level QTL 233.10.0008blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1470053989104886043Rat
1641900Alcrsp11Alcohol response QTL 11alcohol metabolism trait (VT:0015089)blood ethanol level (CMO:0000535)1470053989104886043Rat


Expression


Sequence

Nucleotide Sequences
GenBank Nucleotide JAXUCZ010000014 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-14816 BioCyc
NCBI Gene Trnap-agg ENTREZGENE
PhenoGen Trnap-agg86 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-10-12 Trnap-agg86  transfer RNA proline (anticodon AGG) 86  NEWGENE_40926764  transfer RNA proline (anticodon AGG)  Symbol and Name Changed 1299863 APPROVED
2021-01-27 NEWGENE_40926764  transfer RNA proline (anticodon AGG)      Symbol and Name status set to provisional 70820 PROVISIONAL