Gipr (gastric inhibitory polypeptide receptor) - Rat Genome Database

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Gene: Gipr (gastric inhibitory polypeptide receptor) Rattus norvegicus
Analyze
Symbol: Gipr
Name: gastric inhibitory polypeptide receptor
RGD ID: 2689
Description: Enables gastric inhibitory peptide receptor activity and peptide hormone binding activity. Involved in several processes, including desensitization of G protein-coupled receptor signaling pathway; gastric inhibitory peptide signaling pathway; and positive regulation of insulin secretion. Predicted to be active in plasma membrane. Used to study type 2 diabetes mellitus. Biomarker of hyperglycemia. Human ortholog(s) of this gene implicated in cardiovascular system disease; diabetes mellitus; and obesity. Orthologous to human GIPR (gastric inhibitory polypeptide receptor); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: gastric inhibitory peptide receptor; GIP-R; Gippr; glucose-dependent insulinotropic polypeptide receptor; RATGIPPR
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8187,932,316 - 87,956,084 (-)NCBIGRCr8
mRatBN7.2178,804,287 - 78,814,462 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl178,805,593 - 78,814,462 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx184,193,315 - 84,203,481 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0192,750,951 - 92,761,121 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0185,948,417 - 85,958,584 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0180,063,047 - 80,073,223 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl180,063,049 - 80,073,223 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0181,329,939 - 81,340,229 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4178,515,051 - 78,526,160 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1178,593,161 - 78,604,271 (-)NCBI
Celera173,269,949 - 73,280,124 (-)NCBICelera
Cytogenetic Map1q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

References - curated
# Reference Title Reference Citation
1. Sp1/Sp3 binding is associated with cell-specific expression of the glucose-dependent insulinotropic polypeptide receptor gene. Boylan MO, etal., Am J Physiol Endocrinol Metab. 2006 Jun;290(6):E1287-95. Epub 2006 Jan 10.
2. Glucose-dependent insulinotropic polypeptide (GIP) and its receptor (GIPR): cellular localization, lesion-affected expression, and impaired regenerative axonal growth. Buhren BA, etal., J Neurosci Res. 2009 Jun;87(8):1858-70.
3. Upregulation of glucose-dependent insulinotropic polypeptide and its receptor in the retina of streptozotocin-induced diabetic rats. Cho GJ, etal., Curr Eye Res. 2002 Dec;25(6):381-8.
4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
5. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
6. A novel GIP receptor splice variant influences GIP sensitivity of pancreatic beta-cells in obese mice. Harada N, etal., Am J Physiol Endocrinol Metab. 2008 Jan;294(1):E61-8. Epub 2007 Oct 30.
7. Diabetic kidney lesions of GIPRdn transgenic mice: podocyte hypertrophy and thickening of the GBM precede glomerular hypertrophy and glomerulosclerosis. Herbach N, etal., Am J Physiol Renal Physiol. 2009 Apr;296(4):F819-29. Epub 2009 Feb 11.
8. Overexpression of a dominant negative GIP receptor in transgenic mice results in disturbed postnatal pancreatic islet and beta-cell development. Herbach N, etal., Regul Pept. 2005 Feb 15;125(1-3):103-17.
9. Ultrastructural identification of neurofibrillary tangles in the spinal cords in Guamanian amyotrophic lateral sclerosis and parkinsonism-dementia complex on Guam. Kato S, etal., Acta Neuropathol. 1992;83(3):277-82.
10. Glucose-dependent insulinotropic polypeptide confers early phase insulin release to oral glucose in rats: demonstration by a receptor antagonist. Lewis JT, etal., Endocrinology. 2000 Oct;141(10):3710-6.
11. Defective glucose-dependent insulinotropic polypeptide receptor expression in diabetic fatty Zucker rats. Lynn FC, etal., Diabetes 2001 May;50(5):1004-11.
12. A novel pathway for regulation of glucose-dependent insulinotropic polypeptide (GIP) receptor expression in beta cells. Lynn FC, etal., FASEB J 2003 Jan;17(1):91-3.
13. Inhibition of gastric inhibitory polypeptide signaling prevents obesity. Miyawaki K, etal., Nat Med 2002 Jul;8(7):738-42.
14. Glucose intolerance caused by a defect in the entero-insular axis: a study in gastric inhibitory polypeptide receptor knockout mice. Miyawaki K, etal., Proc Natl Acad Sci U S A 1999 Dec 21;96(26):14843-7.
15. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
16. Association analyses of GIP and GIPR polymorphisms with traits of the metabolic syndrome. Nitz I, etal., Mol Nutr Food Res. 2007 Aug;51(8):1046-52.
17. GOA pipeline RGD automated data pipeline
18. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
19. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
20. GIP receptor mRNA expression in different fat tissue depots in postmenopausal non-diabetic women. Rudovich N, etal., Regul Pept. 2007 Aug 16;142(3):138-45. Epub 2007 Feb 23.
21. Decreased TCF7L2 protein levels in type 2 diabetes mellitus correlate with downregulation of GIP- and GLP-1 receptors and impaired beta-cell function. Shu L, etal., Hum Mol Genet. 2009 Jul 1;18(13):2388-99. Epub 2009 Apr 21.
22. Tentative Sequence Identification Numbers Tentative Sequence Data IDs. TIGR Gene Index, Rat Data
23. The cysteine of the cytoplasmic tail of glucose-dependent insulinotropic peptide receptor mediates its chronic desensitization and down-regulation. Tseng CC and Zhang XY, Mol Cell Endocrinol. 1998 Apr 30;139(1-2):179-86.
24. Chronic desensitization of the glucose-dependent insulinotropic polypeptide receptor in diabetic rats. Tseng CC, etal., Am J Physiol. 1996 Apr;270(4 Pt 1):E661-6.
25. Postprandial stimulation of insulin release by glucose-dependent insulinotropic polypeptide (GIP). Effect of a specific glucose-dependent insulinotropic polypeptide receptor antagonist in the rat. Tseng CC, etal., J Clin Invest. 1996 Dec 1;98(11):2440-5.
26. Gastric inhibitory polypeptide receptor, a member of the secretin-vasoactive intestinal peptide receptor family, is widely distributed in peripheral organs and the brain. Usdin TB, etal., Endocrinology 1993 Dec;133(6):2861-70.
27. Gastric inhibitory polypeptide receptor: association analyses for obesity of several polymorphisms in large study groups. Vogel CI, etal., BMC Med Genet. 2009 Mar 2;10:19.
28. Ubiquitination is involved in glucose-mediated downregulation of GIP receptors in islets. Zhou J, etal., Am J Physiol Endocrinol Metab. 2007 Aug;293(2):E538-47. Epub 2007 May 15.
Additional References at PubMed
PMID:15716418   PMID:17360984   PMID:17803965   PMID:20332343   PMID:21270265   PMID:22778220   PMID:23689510   PMID:24360021   PMID:26395740   PMID:33321289   PMID:34607331  


Genomics

Comparative Map Data
Gipr
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8187,932,316 - 87,956,084 (-)NCBIGRCr8
mRatBN7.2178,804,287 - 78,814,462 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl178,805,593 - 78,814,462 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx184,193,315 - 84,203,481 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0192,750,951 - 92,761,121 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0185,948,417 - 85,958,584 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0180,063,047 - 80,073,223 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl180,063,049 - 80,073,223 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0181,329,939 - 81,340,229 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4178,515,051 - 78,526,160 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1178,593,161 - 78,604,271 (-)NCBI
Celera173,269,949 - 73,280,124 (-)NCBICelera
Cytogenetic Map1q21NCBI
GIPR
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381945,668,221 - 45,683,722 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1945,668,221 - 45,683,722 (+)EnsemblGRCh38hg38GRCh38
GRCh371946,171,479 - 46,186,980 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361950,863,342 - 50,877,557 (+)NCBINCBI36Build 36hg18NCBI36
Build 341950,863,341 - 50,877,557NCBI
Celera1942,977,625 - 42,991,837 (+)NCBICelera
Cytogenetic Map19q13.32NCBI
HuRef1942,600,524 - 42,614,679 (+)NCBIHuRef
CHM1_11946,174,972 - 46,189,186 (+)NCBICHM1_1
T2T-CHM13v2.01948,495,760 - 48,511,255 (+)NCBIT2T-CHM13v2.0
Gipr
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39718,889,988 - 18,904,173 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl718,889,986 - 18,900,052 (-)EnsemblGRCm39 Ensembl
GRCm38719,156,063 - 19,170,248 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl719,156,061 - 19,166,127 (-)EnsemblGRCm38mm10GRCm38
MGSCv37719,742,474 - 19,751,476 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36718,315,453 - 18,324,649 (-)NCBIMGSCv36mm8
Celera716,568,476 - 16,578,046 (-)NCBICelera
Cytogenetic Map7A3NCBI
cM Map79.46NCBI
Gipr
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955574140,307 - 156,899 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955574140,307 - 153,684 (+)NCBIChiLan1.0ChiLan1.0
GIPR
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22051,831,009 - 51,845,310 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11953,702,530 - 53,716,790 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01942,673,553 - 42,688,059 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11951,213,090 - 51,225,293 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1951,213,090 - 51,225,293 (+)Ensemblpanpan1.1panPan2
GIPR
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11109,898,617 - 109,909,331 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1109,899,874 - 109,909,410 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1109,383,520 - 109,394,464 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01110,431,638 - 110,442,592 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1110,431,641 - 110,441,388 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11110,107,193 - 110,118,149 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01109,741,834 - 109,752,781 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01110,610,695 - 110,621,654 (-)NCBIUU_Cfam_GSD_1.0
Gipr
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934917,697,897 - 17,715,171 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367062,053,433 - 2,061,241 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367062,052,069 - 2,062,722 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GIPR
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl652,022,681 - 52,033,954 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1652,022,667 - 52,033,959 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
GIPR
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1639,108,319 - 39,122,973 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl639,110,387 - 39,122,874 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607318,735,245 - 18,751,098 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Gipr
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248327,497,258 - 7,507,212 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248327,497,147 - 7,507,123 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Gipr
30 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:443
Count of miRNA genes:236
Interacting mature miRNAs:291
Transcripts:ENSRNOT00000021456
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2313059Bss55Bone structure and strength QTL 553.20.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)143284731118944897Rat
631688Hcas2Hepatocarcinoma susceptibility QTL 230.0001liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)15925874115540829Rat
1578649Bmd8Bone mineral density QTL 84.9femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)14939317294393172Rat
1582234Gluco18Glucose level QTL 183.40.0003blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)178479925123479925Rat
1358359Sradr1Stress Responsive Adrenal Weight QTL 14.74adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)130882023123479925Rat
634314Niddm44Non-insulin dependent diabetes mellitus QTL 44blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)149393289199050459Rat
4889929Bss87Bone structure and strength QTL 876.7tibia area (VT:1000281)tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)15389511782174945Rat
2313062Bmd73Bone mineral density QTL 733.90.0001tibia mineral mass (VT:1000283)compact volumetric bone mineral density (CMO:0001730)11148131282174945Rat
8552900Pigfal1Plasma insulin-like growth factor 1 level QTL 17.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)13483685879836858Rat
1578654Bss10Bone structure and strength QTL 104femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)149393172159356837Rat
1554320Bmd1Bone mineral density QTL 112.20.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)150910886060548Rat
2302059Pia36Pristane induced arthritis QTL 363.80.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)14333300288333002Rat
2313065Bss67Bone structure and strength QTL 673.10.0001tibia area (VT:1000281)tibia total energy absorbed before break (CMO:0001736)11148131282174945Rat
1300121Hrtrt1Heart rate QTL 13.7heart pumping trait (VT:2000009)heart rate (CMO:0000002)165789093115540829Rat
7421628Bp361Blood pressure QTL 3610.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)166023617118608521Rat
2313069Bss68Bone structure and strength QTL 682.90.0001tibia size trait (VT:0100001)tibia total energy absorbed before break (CMO:0001736)11148131282174945Rat
631495Bp96Blood pressure QTL 964.52arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)122340647102268831Rat
2313075Bss66Bone structure and strength QTL 663.40.0001tibia length (VT:0004357)tibia length (CMO:0000450)11148131282174945Rat
70225Bp58Blood pressure QTL 583.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)132356093162846471Rat
631512Scl6Serum cholesterol level QTL 69.6blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)17219768090508767Rat
2298545Neuinf8Neuroinflammation QTL 84.6nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)157336763151090257Rat
2313072Bss53Bone structure and strength QTL 534.30.0001tibia length (VT:0004357)tibia length (CMO:0000450)143284731118944897Rat
10059597Bp377Blood pressure QTL 3773.420.025arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)132737458199368955Rat
2313078Bss54Bone structure and strength QTL 543.50.0001tibia area (VT:1000281)tibia midshaft cross-sectional area (CMO:0001717)143284731118944897Rat
2313077Bss69Bone structure and strength QTL 693.50.0001tibia strength trait (VT:1000284)bone polar moment of inertia (CMO:0001558)11148131282174945Rat
1549903Bp267Blood pressure QTL 267arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)177876254106047988Rat
2313402Anxrr24Anxiety related response QTL 24aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)148963584144267916Rat
61342Bp27Blood pressure QTL 273.40.0006arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)15673266898773277Rat
1300172Bp172Blood pressure QTL 1723.56arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)13273727390665040Rat
4889962Bss94Bone structure and strength QTL 943.8tibia area (VT:1000281)tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)14936146582174945Rat
61344Bp29Blood pressure QTL 297.5arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)178350581123350581Rat
1358192Ept13Estrogen-induced pituitary tumorigenesis QTL 133.4pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)177494165122494165Rat
2313094Bss58Bone structure and strength QTL 583.70.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)143284731118944897Rat
6903308Scl36Serum cholesterol QTL 3620.0125blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)15386304190532583Rat
2313092Bmd72Bone mineral density QTL 722.50.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)11148131282174945Rat
2300164Bmd44Bone mineral density QTL 445.40.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)156949932101949932Rat
2313099Bss56Bone structure and strength QTL 562.40.0001tibia size trait (VT:0100001)tibia midshaft endosteal cross-sectional area (CMO:0001716)143284731118944897Rat
2313098Bmd70Bone mineral density QTL 703.60.0001tibia mineral mass (VT:1000283)compact volumetric bone mineral density (CMO:0001730)143284731118944897Rat
2313097Bss70Bone structure and strength QTL 703.50.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)11148131282174945Rat
9589820Insglur3Insulin/glucose ratio QTL 310.750.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)13483685879836858Rat
152025249Scl82Serum cholesterol level QTL 824.77blood cholesterol amount (VT:0000180)15034351099980958Rat
10054135Gmadr2Adrenal mass QTL 21.970.0129adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)177857876122857876Rat
7411712Strs4Sensitivity to stroke QTL 48.7cerebrum integrity trait (VT:0010549)percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)178430536123430536Rat
4889919Bss86Bone structure and strength QTL 864.1tibia area (VT:1000281)tibia midshaft total cross-sectional area (CMO:0001715)15389511782174945Rat
8552948Pigfal11Plasma insulin-like growth factor 1 level QTL 114.7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)13483685879836858Rat
2313051Bss57Bone structure and strength QTL 573.70.0001tibia strength trait (VT:1000284)bone polar moment of inertia (CMO:0001558)143284731118944897Rat
61433Cia2Collagen induced arthritis QTL 25joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)17843075491209302Rat

Markers in Region
D1Wox30  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2178,804,569 - 78,804,684 (+)MAPPERmRatBN7.2
Rnor_6.0180,063,332 - 80,063,446NCBIRnor6.0
Rnor_5.0181,330,224 - 81,330,338UniSTSRnor5.0
RGSC_v3.4178,515,333 - 78,515,448RGDRGSC3.4
RGSC_v3.4178,515,334 - 78,515,448UniSTSRGSC3.4
RGSC_v3.1178,593,444 - 78,593,559RGD
Celera173,270,232 - 73,270,346UniSTS
RH 3.4 Map1789.0RGD
RH 3.4 Map1789.0UniSTS
Cytogenetic Map1q21UniSTS
RH144450  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2178,804,500 - 78,804,725 (+)MAPPERmRatBN7.2
Rnor_6.0180,063,263 - 80,063,487NCBIRnor6.0
Rnor_5.0181,330,155 - 81,330,379UniSTSRnor5.0
RGSC_v3.4178,515,265 - 78,515,489UniSTSRGSC3.4
Celera173,270,163 - 73,270,387UniSTS
RH 3.4 Map1812.5UniSTS
Cytogenetic Map1q21UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 9 44 113 70 69 38 25 38 6 189 91 93 44 60 31

Sequence


Ensembl Acc Id: ENSRNOT00000021456   ⟹   ENSRNOP00000021456
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl178,805,593 - 78,814,462 (-)Ensembl
Rnor_6.0 Ensembl180,063,049 - 80,073,223 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000112788   ⟹   ENSRNOP00000081882
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl178,805,593 - 78,814,462 (-)Ensembl
RefSeq Acc Id: NM_012714   ⟹   NP_036846
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8187,932,318 - 87,942,492 (-)NCBI
mRatBN7.2178,804,287 - 78,814,462 (-)NCBI
Rnor_6.0180,063,049 - 80,073,223 (-)NCBI
Rnor_5.0181,329,939 - 81,340,229 (-)NCBI
RGSC_v3.4178,515,051 - 78,526,160 (-)RGD
Celera173,269,949 - 73,280,124 (-)RGD
Sequence:
RefSeq Acc Id: XM_063281146   ⟹   XP_063137216
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8187,932,316 - 87,956,084 (-)NCBI
RefSeq Acc Id: NP_036846   ⟸   NM_012714
- Peptide Label: precursor
- UniProtKB: P43219 (UniProtKB/Swiss-Prot),   A6J8K3 (UniProtKB/TrEMBL),   A0A8I5ZT57 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000021456   ⟸   ENSRNOT00000021456
Ensembl Acc Id: ENSRNOP00000081882   ⟸   ENSRNOT00000112788
RefSeq Acc Id: XP_063137216   ⟸   XM_063281146
- Peptide Label: isoform X1
- UniProtKB: P43219 (UniProtKB/Swiss-Prot),   A6J8K3 (UniProtKB/TrEMBL)
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P43219-F1-model_v2 AlphaFold P43219 1-455 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:2689 AgrOrtholog
BioCyc Gene G2FUF-60527 BioCyc
Ensembl Genes ENSRNOG00000015860 Ensembl, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSRNOG00055032729 UniProtKB/Swiss-Prot
  ENSRNOG00060032915 UniProtKB/Swiss-Prot
  ENSRNOG00065033957 UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000021456.3 UniProtKB/Swiss-Prot
  ENSRNOT00000112788.1 UniProtKB/TrEMBL
  ENSRNOT00055056580 UniProtKB/Swiss-Prot
  ENSRNOT00060057068 UniProtKB/Swiss-Prot
  ENSRNOT00065058323 UniProtKB/Swiss-Prot
Gene3D-CATH 4.10.1240.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Rhodopsin 7-helix transmembrane proteins UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro GPCR_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_2-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_2_extracell_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_2_extracellular_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_2_GIP_rcpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_2_secretin-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_2_secretin-like_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:25024 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 25024 ENTREZGENE
PANTHER GASTRIC INHIBITORY POLYPEPTIDE RECEPTOR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PDF RECEPTOR-LIKE PROTEIN-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam 7tm_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HRM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Gipr PhenoGen
PRINTS GIPRECEPTOR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCRSECRETIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F2_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F2_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F2_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F2_4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx ENSRNOG00000015860 RatGTEx
  ENSRNOG00055032729 RatGTEx
  ENSRNOG00060032915 RatGTEx
  ENSRNOG00065033957 RatGTEx
SMART HormR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF111418 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
TIGR TC220766
UniProt A0A8I5ZT57 ENTREZGENE, UniProtKB/TrEMBL
  A6J8K3 ENTREZGENE, UniProtKB/TrEMBL
  GIPR_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2004-09-10 Gipr  gastric inhibitory polypeptide receptor    gastric inhibitory peptide receptor  Name updated 1299863 APPROVED
2002-06-10 Gipr  gastric inhibitory peptide receptor      Symbol and Name status set to approved 70586 APPROVED

RGD Curation Notes
Note Type Note Reference
gene_disease may be associated with type 2 diabetes 68929
gene_disease decreased mRNA and protein expression is detected in pancreatic islets of the Vancouver diabetic fatty Zucker rat 68929
gene_function receptor for GIP (gastric inhibitory peptide) 68929
gene_process potentiates glucose-induced insulin secretion from the pancreatic beta cells 68929