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Gene: Wdfy4 (WDFY family member 4) Rattus norvegicus

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Symbol:

Wdfy4

Name:

WDFY family member 4

RGD ID:

1564142

Description:

Predicted to be involved in antigen processing and presentation. Predicted to act upstream of or within with a positive effect on CD8-positive, alpha-beta T cell activation. Predicted to act upstream of or within cellular response to virus. Orthologous to human WDFY4 (WDFY family member 4); INTERACTS WITH alpha-Zearalanol; atrazine; bisphenol A.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC498582; RGD1564142; similar to chromosome 10 open reading frame 64; WD repeat- and FYVE domain-containing protein 4

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	WDFY4 (WDFY family member 4)	HGNC	EggNOG, Ensembl, HomoloGene, NCBI, OMA, OrthoMCL, Panther
Mus musculus (house mouse):	Wdfy4 (WD repeat and FYVE domain containing 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Wdfy4 (WDFY family member 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	WDFY4 (WDFY family member 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	WDFY4 (WDFY family member 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Wdfy4 (WDFY family member 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	WDFY4 (WDFY family member 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	WDFY4 (WDFY family member 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Wdfy4 (WDFY family member 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	MEPE (matrix extracellular phosphoglycoprotein)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	WDFY4 (WDFY family member 4)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Wdfy4 (WD repeat and FYVE domain containing 4)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	wdfy4 (WDFY family member 4)	Alliance	DIOPT (Ensembl Compara\|OrthoFinder)
Saccharomyces cerevisiae (baker's yeast):	BPH1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OrthoFinder\|OrthoInspector)
Xenopus tropicalis (tropical clawed frog):	wdfy4	Alliance	DIOPT (Ensembl Compara\|PANTHER\|PhylomeDB)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	8,228,147 - 8,456,777 (-)	NCBI		GRCr8
mRatBN7.2	16	8,221,853 - 8,450,494 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	8,221,719 - 8,450,491 (-)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	16	9,194,446 - 9,430,764 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	9,194,424 - 9,430,743 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	16	11,157,412 - 11,391,121 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	16	8,484,513 - 8,707,957 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	16	6,784,539 - 6,984,311 (+)	NCBI		Celera
Cytogenetic Map	16	p16	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

Cockayne syndrome B (ISO)

Developmental Disabilities (ISO)

megacolon (ISO)

schizophrenia (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (ISO)

1,2-dimethylhydrazine (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2,4-dibromophenyl 2,4,5-tribromophenyl ether (ISO)

3-methylcholanthrene (ISO)

4,4'-sulfonyldiphenol (ISO)

actinomycin D (ISO)

Aflatoxin B2 alpha (ISO)

alpha-Zearalanol (EXP)

antirheumatic drug (ISO)

atrazine (EXP)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

buta-1,3-diene (ISO)

cadmium dichloride (ISO)

carbon nanotube (ISO)

CGP 52608 (ISO)

chloroprene (ISO)

chlorpyrifos (ISO)

choline (ISO)

Cuprizon (EXP)

Dibutyl phosphate (ISO)

dimethylarsinic acid (ISO)

diquat (ISO)

ethanol (ISO)

ethyl methanesulfonate (ISO)

folic acid (ISO)

formaldehyde (ISO)

inulin (ISO)

L-methionine (ISO)

lidocaine (EXP)

methyl methanesulfonate (ISO)

methylarsonic acid (ISO)

N,N-diethyl-m-toluamide (EXP)

nickel atom (ISO)

Nutlin-3 (ISO)

oxaliplatin (EXP)

ozone (ISO)

perfluorooctane-1-sulfonic acid (ISO)

permethrin (EXP)

sodium arsenate (ISO)

sodium arsenite (ISO)

tacrolimus hydrate (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

topotecan (EXP)

trichloroethene (EXP)

triclosan (ISO)

trovafloxacin (ISO)

tungsten (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

antigen processing and presentation (IBA,ISO)

CD8-positive, alpha-beta T cell activation (ISO)

cellular response to virus (ISO)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:30409884

Genomics

Comparative Map Data

Wdfy4
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	8,228,147 - 8,456,777 (-)	NCBI		GRCr8
mRatBN7.2	16	8,221,853 - 8,450,494 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	8,221,719 - 8,450,491 (-)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	16	9,194,446 - 9,430,764 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	9,194,424 - 9,430,743 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	16	11,157,412 - 11,391,121 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	16	8,484,513 - 8,707,957 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	16	6,784,539 - 6,984,311 (+)	NCBI		Celera
Cytogenetic Map	16	p16	NCBI

WDFY4
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	48,684,873 - 48,982,956 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	48,684,873 - 48,982,956 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	10	49,892,918 - 50,191,001 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	49,638,068 - 49,861,006 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	10	43,479,368 - 43,776,620 (+)	NCBI		Celera
Cytogenetic Map	10	q11.23	NCBI
HuRef	10	44,158,995 - 44,455,857 (+)	NCBI		HuRef
CHM1_1	10	50,175,325 - 50,472,616 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	10	49,534,432 - 49,832,184 (+)	NCBI		T2T-CHM13v2.0

Wdfy4
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	14	32,681,504 - 32,915,809 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	14	32,681,504 - 32,907,465 (-)	Ensembl		GRCm39 Ensembl
GRCm38	14	32,959,547 - 33,193,855 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	14	32,959,547 - 33,185,508 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	14	33,772,733 - 33,998,252 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	14	30,564,534 - 30,566,185 (-)	NCBI		MGSCv36	mm8
Celera	14	29,219,228 - 29,445,431 (-)	NCBI		Celera
Cytogenetic Map	14	B	NCBI
cM Map	14	19.44	NCBI

Wdfy4
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955556	1,177,117 - 1,421,228 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955556	1,178,970 - 1,421,139 (-)	NCBI	ChiLan1.0	ChiLan1.0

WDFY4
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	60,950,509 - 61,250,879 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	60,955,868 - 61,255,274 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	10	45,262,213 - 45,560,401 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3

WDFY4
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	28	614,388 - 900,855 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	28	613,602 - 900,850 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	28	843,117 - 1,129,599 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	28	790,158 - 1,076,647 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	28	790,228 - 1,076,645 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	28	589,286 - 875,741 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	28	630,396 - 918,966 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	28	755,700 - 1,042,196 (+)	NCBI		UU_Cfam_GSD_1.0

Wdfy4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	80,059,548 - 80,334,322 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936728	1,262,771 - 1,503,804 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936728	1,262,433 - 1,503,805 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

WDFY4
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	89,353,443 - 89,632,695 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	89,353,362 - 89,632,722 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	97,147,400 - 97,427,021 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

WDFY4
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	9	42,814,606 - 43,111,161 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666048	2,576,099 - 2,872,143 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Wdfy4
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624928	943,864 - 1,221,243 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624928	943,547 - 1,243,954 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Wdfy4
2057 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	52
Count of miRNA genes:	49
Interacting mature miRNAs:	52
Transcripts:	ENSRNOT00000043811
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
631561	Hcuc2	Hepatic copper content QTL 2	2.8		liver copper amount (VT:0003065)	liver total copper weight (CMO:0001507)	16	1	39533949	Rat
1582235	Insul8	Insulin level QTL 8	3.3	0.0063	blood insulin amount (VT:0001560)	calculated serum insulin level (CMO:0000359)	16	1	26727669	Rat
2307172	Activ4	Activity QTL 4	3.71	0.00023	locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	16	1	33418960	Rat
1354584	Despr6	Despair related QTL 6	3.1	0.0067	locomotor behavior trait (VT:0001392)	amount of time spent in voluntary immobility (CMO:0001043)	16	1	39533930	Rat
1357403	Slep4	Serum leptin concentration QTL 4	3.91		blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	16	1	9639137	Rat
2302380	Slep6	Serum leptin concentration QTL 6	3.36		blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	16	1	32139025	Rat
737819	Hcas4	Hepatocarcinoma susceptibility QTL 4	4.43		liver integrity trait (VT:0010547)	volume of individual liver tumorous lesion (CMO:0001078)	16	4227609	46975965	Rat
9590151	Scort8	Serum corticosterone level QTL 8	8.45	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	16	1	30836262	Rat
1354625	Despr7	Despair related QTL 7	3.16	0.016	locomotor behavior trait (VT:0001392)	amount of time spent in voluntary immobility (CMO:0001043)	16	1	44977551	Rat
61338	Bp23	Blood pressure QTL 23	4.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	16	4227609	49227609	Rat
61405	Niddm6	Non-insulin dependent diabetes mellitus QTL 6	3.66	0.001	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	16	4227609	48972724	Rat
631830	Alc7	Alcohol consumption QTL 7	2.9		consumption behavior trait (VT:0002069)	ethanol drink intake rate (CMO:0001407)	16	1	26727669	Rat
7411664	Foco30	Food consumption QTL 30	11	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	16	1	44588133	Rat
1600378	Arunc4	Aerobic running capacity QTL 4		0.03	exercise endurance trait (VT:0002332)	maximum distance run on treadmill (CMO:0001406)	16	380245	80345693	Rat
70183	BpQTLcluster13	Blood pressure QTL cluster 13	3.654		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	16	4227609	43025077	Rat
1600369	Hcas8	Hepatocarcinoma susceptibility QTL 8			liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	16	1	22477621	Rat
737826	Alc11	Alcohol consumption QTL 11	3.2		consumption behavior trait (VT:0002069)	ethanol drink intake rate (CMO:0001407)	16	4227609	60252231	Rat
737825	Alc13	Alcohol consumption QTL 13	4.5		consumption behavior trait (VT:0002069)	ethanol drink intake rate (CMO:0001407)	16	4227609	16039848	Rat
2303566	Bw90	Body weight QTL 90	2		body mass (VT:0001259)	body weight (CMO:0000012)	16	1	39533930	Rat
2312663	Slep9	Serum leptin concentration QTL 9		0.001	blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	16	832236	59492508	Rat
2306902	Bp339	Blood pressure QTL 339		0.01	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	16	3380150	43025077	Rat
1300133	Rf24	Renal function QTL 24	3.64		blood creatinine amount (VT:0005328)	creatinine clearance (CMO:0000765)	16	3380150	21361552	Rat
2312660	Bw95	Body weight QTL 95		0.05	inguinal fat pad mass (VT:0010424)	inguinal fat pad weight to body weight ratio (CMO:0001253)	16	832236	59492508	Rat
2312666	Insul16	Insulin level QTL 16		0.01	blood insulin amount (VT:0001560)	serum insulin level (CMO:0000358)	16	832236	59492508	Rat
634355	Rends4	Renal damage susceptibility QTL 4		0.05	kidney blood vessel morphology trait (VT:0000530)	organ lesion measurement (CMO:0000677)	16	1	26727669	Rat
61372	Bp40	Blood pressure QTL 40	2.2		blood pressure trait (VT:0000183)	systolic blood pressure (CMO:0000004)	16	4227730	17696785	Rat
2293343	Glom16	Glomerulus QTL 16	7.4		kidney glomerulus integrity trait (VT:0010546)	kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)	16	832236	46053497	Rat
2301406	Kidm39	Kidney mass QTL 39		0.002	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	16	2851709	15884239	Rat
6903319	Bw114	Body weight QTL 114	2.7	0.0037	body mass (VT:0001259)	body weight (CMO:0000012)	16	1	43534949	Rat
2312669	Stl23	Serum triglyceride level QTL 23		0.01	blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	16	832236	59492508	Rat

Markers in Region

D16Rat38

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	8,336,147 - 8,336,378 (+)	MAPPER	mRatBN7.2
mRatBN7.2	16	8,336,147 - 8,336,281 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	9,316,324 - 9,316,554	NCBI	Rnor6.0
Rnor_6.0	16	9,316,324 - 9,316,457	NCBI	Rnor6.0
Rnor_5.0	16	11,276,717 - 11,276,850	UniSTS	Rnor5.0
Rnor_5.0	16	11,276,717 - 11,276,947	UniSTS	Rnor5.0
RGSC_v3.4	16	8,612,391 - 8,612,524	UniSTS	RGSC3.4
RGSC_v3.4	16	8,612,390 - 8,612,621	RGD	RGSC3.4
RGSC_v3.4	16	8,612,391 - 8,612,621	UniSTS	RGSC3.4
RGSC_v3.1	16	8,612,389 - 8,612,619	RGD
Celera	16	6,869,813 - 6,870,043	UniSTS
Celera	16	6,869,910 - 6,870,043	UniSTS
RH 3.4 Map	16	82.4	RGD
RH 3.4 Map	16	82.4	UniSTS
RH 2.0 Map	16	37.4	RGD
SHRSP x BN Map	16	3.4699	RGD
FHH x ACI Map	16	5.3399	RGD
Cytogenetic Map	16	p16	UniSTS

RH133515

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	8,277,845 - 8,278,064 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	9,259,134 - 9,259,352	NCBI	Rnor6.0
Rnor_5.0	16	11,219,527 - 11,219,745	UniSTS	Rnor5.0
RGSC_v3.4	16	8,554,688 - 8,554,906	UniSTS	RGSC3.4
Celera	16	6,927,882 - 6,928,100	UniSTS
RH 3.4 Map	16	82.3	UniSTS
Cytogenetic Map	16	p16	UniSTS

20.MMHAP82FRG8.seq

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	8,302,181 - 8,302,357 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	9,283,470 - 9,283,645	NCBI	Rnor6.0
Rnor_5.0	16	11,243,863 - 11,244,038	UniSTS	Rnor5.0
RGSC_v3.4	16	8,579,026 - 8,579,201	UniSTS	RGSC3.4
Celera	16	6,903,829 - 6,904,004	UniSTS
Cytogenetic Map	16	p16	UniSTS

RH131968

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	8,221,894 - 8,222,061 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	9,194,488 - 9,194,654	NCBI	Rnor6.0
Rnor_5.0	16	11,157,454 - 11,157,620	UniSTS	Rnor5.0
RGSC_v3.4	16	8,484,550 - 8,484,716	UniSTS	RGSC3.4
Celera	16	6,984,103 - 6,984,269	UniSTS
RH 3.4 Map	16	81.7	UniSTS
Cytogenetic Map	16	p16	UniSTS

BM389240

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	8,221,969 - 8,222,155 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	9,194,563 - 9,194,748	NCBI	Rnor6.0
Rnor_5.0	16	11,157,529 - 11,157,714	UniSTS	Rnor5.0
RGSC_v3.4	16	8,484,625 - 8,484,810	UniSTS	RGSC3.4
Celera	16	6,984,009 - 6,984,194	UniSTS
RH 3.4 Map	16	82.5	UniSTS
Cytogenetic Map	16	p16	UniSTS

AU049752

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	8,263,357 - 8,263,625 (+)	MAPPER	mRatBN7.2
mRatBN7.2	1	234,560,676 - 234,560,723 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	9,244,838 - 9,245,105	NCBI	Rnor6.0
Rnor_6.0	16	9,244,838 - 9,245,189	NCBI	Rnor6.0
Rnor_5.0	16	11,205,231 - 11,205,582	UniSTS	Rnor5.0
Rnor_5.0	16	11,205,231 - 11,205,498	UniSTS	Rnor5.0
RGSC_v3.4	16	8,540,253 - 8,540,520	UniSTS	RGSC3.4
Celera	16	6,942,338 - 6,942,651	UniSTS
Cytogenetic Map	16	p16	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001427658	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006222110	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006222111	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006222112	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006252760	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006252762	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008771159	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039095074	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039095075	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039095077	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039095079	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAXUCZ010000016	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000043811 ⟹ ENSRNOP00000042082

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	16	8,221,719 - 8,450,491 (-)	Ensembl
Rnor_6.0 Ensembl	16	9,194,424 - 9,430,743 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000100506 ⟹ ENSRNOP00000081102

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	16	8,221,719 - 8,450,491 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000118604 ⟹ ENSRNOP00000086747

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	16	8,221,719 - 8,450,491 (-)	Ensembl

RefSeq Acc Id:

NM_001427658 ⟹ NP_001414587

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	8,228,147 - 8,456,761 (-)	NCBI

RefSeq Acc Id:

XM_006252760 ⟹ XP_006252822

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	8,228,147 - 8,444,663 (-)	NCBI
mRatBN7.2	16	8,221,853 - 8,438,352 (-)	NCBI
Rnor_6.0	16	9,194,446 - 9,418,413 (-)	NCBI
Rnor_5.0	16	11,157,412 - 11,391,121 (-)	NCBI

Sequence:

show sequence

CACACCTCATAATTCTTCCCAAATAGTTCCACTGCCGGGGAAATATTCAGACGCGTGCACCTAT
GGGGCCTTCAAATTCAAAGCACTCCACCTACTTTCAATCTCCTCAACACAGGTCCACGTCTCTT
ACTTCTGCTCTCGGTTCTTCAGAGCCTCGTTTCCTATTTCCTACTGTCTTACCAACCCCACATG
ACCGCAGACCGACTGCTCCTTCTCTCTAGGCCCTCAGAGTAGACTCTGCCCTCCTTCCAAGGCT
ACTTCTGGCTTTGTGTCTGAGCACCACGTTCCCTGACTCTTGTTCCTGAGGCCGTGAGCAGTAG
GAGAATGGTCCTGGGCCCTTGAAGCCAACAGAAGGCTGCTGTAAGATATCTATCTCTTTCTTTG
CTGAGATTACCCCAGAGAGGACTTATGGGACTAGGACCTGTCAGCTAGGCATTCTCAGCCTAGG
CATGGCCGTCTCCACTGCAGGCCTCCTCTGCTCTGGTTTCCTCCTGATCTCAAATGCTCACACT
GCTTGGATTGCCTGTCCTCTTGCTTCAGCTGTGCATCCCAGTCTTACAGTGCCCATCATGGTAC
TCAGAGCAGCCTTTTCAGATCTCCAAGTGCTACTCAGGCTGGACCACAGGTCCCTCCATACCCT
CAGGTGGTCACGTCTTTGCTCAACATCTATATAGCAATTCCCCTGGTTTCCTTGACACTGGACT
TTGAGGTGTGGATTTAGATGATGGTACTCCTTCCATGACCAATAATCCAATAACACACCACACA
GAGTCTGGAAAGTTTAGTCCATTGATGTAGGCTGCAAGGCAGTGACTAGTGCTGGATGTTCTGG
GGCCCCTGGAGGGAGTGGGGTTCCTGCTCAGGGCCTGGTTGACTGTGGTCTTATCTGGGGTCAA
CAACATTGGGTTGAACTTTGAAAGTTCAGCCTGGGAATCCCTACAGTGCAACTGGCAAAGTATC
CGAGGAGGTCCCAGGCATAGTCTTTCGATGGTTGACCATTGTGCCAAGCCAGCCTGGAGTAGAG
ATAGGGGAAGGGAAGCTACAGGCTCAGTGGCACATGTGTTTGCCTTTGATCCTGATGCCTGCCC
GTGGTTTGGTTTCAGATCCACCAATTCCCCTCTGGGGTGGAGAATTCTCAGTCTTGCACCGCCC
TCCACACAGTGAAATAATGACCCTTGACTAGTAGATTTTCTGTATTTAGAGGACACTGGCCACT
CTGTTGGAAGACCTGAGGCAACGTTTTCTAAGACTCAGTGAGGCTAGGCAACCTGTCAGCCTGT
ATGGTGAAGAGGCTAATGGTTGGGAGCTGAAACTATTGTCACTGAGCTGTTCCTAGCTTATGCC
ATAGGTAAAGCGTCACAGTTTCAGCCAGGGAACCAGTCCTCAGCCCTTTTTGACAATGTGGAAG
TTGATACACATACCAGGATACAAAACCAGCCCCTTCTGCAGGGTAGTTCCTGTGTTCAGTTGCT
GTTGCAAAACCCACAGAGGTGTGTACCCGGCCTTAAGTGCATTGAGGCCTGGAATTAGAAAAGG
GAAGTCTTCAGTCTTTATAAGTCTCTGCAGACCTGCCTGGTTCCTGATAAGTGGTGGCCTACTT
AGTCTTTAGGGGAATTCCAGAGCTTCTGGGAACAACCTGAACTACACCCCTCTTCTGAGGCCTG
TGAAGCAGATGGTAGGGCCCTGACTCTGCCACTCTCTGCTCTCTTCCAAGATCTGCTTTGCCAA
CAATGGAGGCTGAAGATTGTTCAAAGGCTGAGGATAGACCAGAAGACCCAGGTTTCCAAAATGA
AGGACAGTCTTCTGCTGTGAAGCCCACCTTTTCACTAGAAGAGCAGTCTCCTGGCCCCACTGTC
CTCTGGGACATGCTTGAACAGAAATTTCTGGAATATCAGCAGCTGATTCACAAGAACCCAGAGG
AACGTCGGCGAAACCTCCTGAGCCTTCTCCCCCTCTTCCTAAAGGCCTGGGAACATTCTGTGGG
CATCATCTGCTTTCGCAGTCTTCAAAGACTGGCAGAAGATGTGTCCGACCAACTTGCCCAAGAA
ATACAACAGGCACTTTCCGGGAAGCCTGCAGAGCAAGCCCGGGCTGCAGCCGGGCAGCTACTGC
AGTGGAAGAGTGACGTGGATCAGGATGGCTACTTGCTCCTCAAGTCGGTGTATGTGCTCACGGG
GACAGACTCGGAGACGCTGGGCAGAGTGGTGGATTCAGGGCTTCCGGCCCTTCTCCTGCAGTGC
CTGTATCTCTTTTTTGCTTTTCCCGTGGAAAAGGGTGAGCATTTGGAGATTGACGTTCAAGGGC
AGAGGATGTTTGTGCAGATGTTGTTAAACATTTGCAGCGAGTCTCAGGGTCTGGAGGGACTTCT
CTCAGGAAGCGAGCTCCAGTCTCTACTGATCGCTACCACCTGTCTGAGGGAACACAGCTGCTAC
TTCTGGAAACAGCCTACCTTCTGTGTGCTGCGGGCTATCTCCAAGGCTCAGAGCCCTAGCGTCA
TCCAATATCTGCGAACTGCCGACTGTGTCCGGCTCTCGGTTCAGAACCTCTCCAAGCTGGCAGA
CACTCTCCCTGCACCGGAGGTGAGCGAGGCAGTGAGCCTCATCCTGAACTTTGTGAGAGACTCC
TACCCCATCTCCTCTGCGCTGCTCCTGGAGTTTGAGAATGGGGAGGGCTACCCTCTGCTACTCA
AGGTGCTGCTGCGGTATAACGGGGTGACCCAGGGTGTGGTGGAACCCCATCTCGAGGAGCTCAT
CGAGCTGGTGATGTGGCTGACGACTTGTGGGAGGTCAGAGCTGAAGGTGTTTGACAGCATCACT
TATCCTCAGCTTGAAGGCTTCAAGTTCCATCAGGAGGCTTCTGGGGTGACCGTTAAGAATCTCC
AGGCCTTTCAGGTCCTGCAGAATCTTTTCCACAGAGCCAGTGACTCTGTCCTTTGCATCCAAGT
GCTTCTGGCCATCAAGACCATGTGGGCCTGGAACCCTCGCAATTTCTTCCTGCTGGAGTGGACC
CTGCAGCCCATCTCACAGTTTGTAGAGATCATTCCCCTGAAGCCCACCCCGGTGCAAGAACACT
TTTTCCAGCTGTTGGAGACTCTGGTGTTCAAGCTACTCTATGTGCCACATGAGGTCCTGGCTAA
AGTGCAGGGTCTGATCAAGGACAGCCAAGAGCTCTCCTGCACCCTCGTGGCCTTGCGAAGCATC
CTCAGGATCACAGCCAGTGACCGGCTCTTCACTGACATCTTCCGGGACTCAGGACTACTAGGCC
TGCTGCTGGCCCAGCTACGGAAACAGGCCAAGATCATGAGGAAGTCAGGAAACAAAGAGTGCAG
TCCTGGCGTGCAGGATCTGGAGAGGGAACTCACCTGCGTGATGCTGAAGACTGTGGTCGCGCTT
CTGCAAGGTTCTGTTCGAAATGCAGTTGTCCTCAAAGACCACGGCATGGTGCCCTTCATCAAGA
TCTTCCTGGATGATGAATGCTACCGGGGTTCCGCCCTCAGCATCTTGGAGCAGCTCTCAGTCAT
CAACGCTGAGGAGTACATGAGCATCATTGTGGGGGCTTTGTGTTCGTCTACTCAGGGGGAGCTG
CAGCTGAAGCTGGATCTTCTCAAGTCTCTGCTCCGGATCCTGGAGACACCCAAGGGCCATGCTG
CATTCCGTGTCTCCAGTGGCTTCAATGGGCTACTGTCCCTGCTTTCTGACCTGGAGGGGTCCCT
CCAGCTGCCTGCAGTGACAACATGCAGTGCAGTGTCCCCCAGCCAGACCCTGGAGCTGGTGTTG
CATACCCTTTGTGTGGTGTCTGCTGCTCTGCACTTGGACCCTGTCAACAAGCACTTCTTCAGGA
GCAATGGGCTCTTTGAGAAGTTGGCCGAGGACCTCTGTCTGCTGGGCTGTTTTGGGGCCCCAGA
GGAAGAAGGCGCTCAACGGTACTCTTCATCTGACATGAAAGCCAGGCCCTTCGTGGATTTACTG
AGCGGGGCCTTTTCCTCCAGCTGCCAGTTCCCACCCAGGGTGCAGAGCTGCCTACAGATTCTCA
GCTTCCTAGAAAGCATGGCCGGTGGTACCCTCCACCTGCACAGAGACCTGATGGAGCCATCCAA
GGCTGGGCAGGTGCCTTCTTTGGATGCCAGAAAGGGAGAGCCTGGGAGCCGCCAAGGCAAATTC
AAGCAGTGGCCAGACCCGGAGGAGAGGATGGATGAAGGTGACGTCACGATCATGCACCCTGGGA
TCATTTGCATCATGGTGAGACTGCTGCCTCGCCTATACCTTGGCGATCACCCACAGCTCTCCGA
GGAGATCCAGTGTTCAATGGCCCATCACCTCTTGTCCCTGGTGAAGTCAGAGAAGAACCGCCAG
GTCATGTGCGAGGCAGGGATGCTCCGGACACTCATGACCTTTTGCCACAGGACCCTCAGCACGG
GTGGCAGCGCCCTGCACTCGGTTCTCATCAGGATCTTTGAAAAGCTTGGTTCTCAAGCCATCGA
GCCAGATGTGCTAAGACAGTTCCTAGACCTTGGAGTTCGCCCACCTCCGTCAACTGCCAGGAAA
AGCCTCCATTTATCTCCTGGGCATGAAGACGGTCCTGGACGCTCAGGGTCACTGGCAGATACAT
CTGTGAAATCTACACATGCCAGCCCATGTCCTAGAGGGTCTCAGGACCTCAGGTCCTCACCAAC
CTCCGAGGATTCGGCCACAGCCCTCCAGACAACACTGAGCCTCATCTCCATGACCTCCCCGCGC
AATCTGCAGTCCCAGAGGGCAGCCCTGACTCCGTCGTTTGTGGAATTTGACATGTCTGCAGAAG
GCTATGGCTGTCTGTTTATTCCGACCTTGTCTACAGTCATGGGGACCAGCACAGAGCACTCCAT
CTCTGGAGGGACTGGATCAGGAGCTCCCAGGCCATTCCCTCCACCTGGAGGTCTCACCTTCTCC
TGTTGGTTTCTGATCAGCCGGCAGGCCAATGTCATGGAGGGCCACCCACTGCGCTTTCTAACCC
TGGTGCGTCACCTGGCCAGGACAGAGCAGCCCTTTGTCTGCTTCTCCGTCAGCCTCTGCATGGA
TGACCTCTCCTTGGTCGTGTCCACAGAAGAGAAAGAGTTCCAACCCCTGGATATCATGGAGCCT
GAGGATGAGGCAGAGCCCTCAGCAGGCCGTCAGCTCCAGGTCAGGTGTAGCCAGCTGCTGGCTT
GCGGTCAGTGGTATCACCTGGCTGTGGTGGTCAGCAAAGAAATGAAAAGGAACTGCACTGTCAC
CATGTACCTGGATGGACAAGCCATCGGTTCAGCCAAGATGTTATATATTCAAGCCTTACCGGGG
TCTTTTTTTTCAATGGATCCATCATCATTCGTGGACGTTTATGGCTATATTGGAACCCCCAGAG
TTTGGAAACAAAAATCATCCTTAACCTGGCGTCTCGGGCCCGCCTACCTCTTTGAGGAAGACAT
ATCGCCGGATACTCTAGAACTTATTATCAAACTCGGCCCGAGGTACTGTGGTAACTTTCAGGCT
GTGCACCTTCAAGGAGATGTCCCAGATGGTGAAGCCACACCCCTCATCTCGGAGGAAAGGGTTT
CCTTTGGTCTTTATGTACCCAGCTCTTCTATCACCAGCATAATAAACATCAGAAACACCTACAA
TGAGGTGGACAGCCGCCTGATCGCCAAGGAGATGAACATTTCCTCCCGTGACAATGCCACGCCC
GTGTTCTTGCTGAGGAACTGTGCTGGGCACCTTTTCGGGTCTTTGCGGACCCTTGGTGCTGTTG
CTGTAGGCCAGTTAGGGGTGAGGGTGTTCCATTCCAGCCCTGCTGCCAGCAGCCTGGACTACAT
TGGAGGGCCTGCCATCCTCCTAGGCCTCATCTCCCTGGCAACAGATGACCACACCATGTATGCA
GCTATGAAAGTCCTGCACTCGGTCCTGACCAGCAATGCCATGTGTGATTACCTGATGCAGCACA
TCGATGGGTACCAGATCTTAGCCTTTCTCCTGCGGAAGAAGACGCCCTTTCTAAACCACCGCAT
TTTCCAGTTGATCCTCTCGGTGGCCGGCACAGCGGAGCTGGGTTTCCGGCCGTCTGCTGTCACT
AACATGTGTATCTTCCGGCATGTGCTCTGCAATTTTGAGCTCTGGACAAACACTGCAGACAACT
TGGAGCTCACTCTCTTTTCCCATCTCCTGGAGATCCTTCAGTCACCAAGAGAAGGACCCAGGAA
TGCGGAAAGAGCCCACCAGGCACAGTTGGTGCCTAAGCTCATATTTCTCTTCAACGAGCCGAGT
CTGGCTCTGTCCAAGGTCTCCACCATCATTGCCATCCTGGGCTGTCAGCTGAAGGGCCACTTCA
ACATCCAAGACTTACTCAGGGTTGGGCTGTTTGTCATATACACCCTCAAGCCGTCATCGGTGAA
CGAGAGGCAGATCTGCCTGGATGGAGTCCAGGACCCCTCTGCACCTGCTGGAAGCCAAACATCT
GGAAAGGCAATCTGGCTTAGAAACCAGTTGCTGGAGATGCTGTTTGGTGTAATAACTGCCCCCC
AACTTCATCTGTCCTCTGAGTTAAAGGAGCAGGTGTTTCTGAGCCTGGGGCCCGACTGGTTCCT
GCTGCTCCTACAGGGTCACCTGCATCCCAGCACCACCACACTGGCGTTGAAGCTGCTGCTGTAT
TTTCTGTCAAGCCCTTCCCTCTGTGGGCGATTTAGAGATGGCCTGTCTGCAGGATGCTGGGTAG
AGAGCTGCCTGGAGGGGGTGGACATTATGATGGACAACCTGAAGAACCACCCTGCAGTTCCTGA
CCAGAGCCCCTGCCTGCTTCCCGGGTTCCGGGTCTTGAATGACTTTCTGGGCTACCATGTTCTC
ATTCCGGAAGTCTACCTCATCGTGTCTGCCTTCTTCCTCCAGATGCCACTTACAGAGTTGACCG
ACGGGCCCAGAGAGAGCTTGGATTTGATGATTCAGTGGCTTCTCCAGAAACATTACCAGCAAGA
AGTCCTCCAGGCCGGGCTGTGCATAGAAGGCGCCCTGCTTCTCCTGGGGATGCTAAAAGCCATC
ATGAGCCAGCCCCGTGCAGGTTCAGGAGACGGTACCTGGGAGCAGACACTCCCCAGCAGTATTC
TTCAGTTCCTCGGCCTGGTGCACCGCTCCTACCCTCAGGATCCAGCATGGAGGAGCCCTGACTT
CCTCCAGACCATGGCTATCATCACTTTCTCCGTGGAAACCCAGAAGGAGGCCACGTCTGAGTCC
TCTAGAAACACCAGTCGTCCTGGGTCCTCTGCTGAAGCCAGCCATTCTGCTGAGGGGTTCCAAG
CTTCTTTCAAGCCACATCCAGCTCAGAGGCAGCTGAGAGAGTTCATGCAAGTTCTCCTGAGGGA
GCTGCTCTTTGGAGTGTCCAGCCCCAAGCAGTGGCTGCCCTTGGAGGTCCTTCTGGAGGCTTCT
CCAGATGGTGCCACCAGCCAGCAGAAGCGAGACTTCCAATCCGAGGTCCTACTTTCCACCATGG
ACATATTCCACGTCCCAAGTGGGAGTGGCACGCCGACCCTAAGAGGCAGTAAGGAGCCTCAGTC
AAATGCAGAAGCTGGTACTGTGCCTTCCCTTGCAAGCGTTTCCTACTTTACCCAGAAGCTCGTT
GAGAAGCTGCACAGTGGGATGTTCTCAGCAAATCCAAAGCACATCCTCCTCTTCATCACAGAGC
ACATCATATCGGTCATTGAGAACCCATCTTCCCAAAAGGACACTGTCATGAGTGCGTTATATAG
CAGTTTGAATAAAGTCATCCTGCACTGCCTCTCCAAGCCCCAGCAGTCCCTGTCTGAGTGCCTT
GGCCTCCTCAGCATCCTGGACTTCCTACAGGAACAGTGGGACATCATCTTTGCCACCTACAATT
CCAATGTCAACTTCCTCCTGTGCCTCATGCATTGTCTTTTGCTGCTGAATGCCAGGAGTTATCC
GGAAGGATTTGGATTGGAGCCCAAGCCCAGAATTAATCCTTACCACCAAGTCTTCCTTTCTCCA
AGTGAAGAAGTGAAAGATAAGAAGGAGGAGGGCCTCCCAAGTCTGGGCGATGTCCAGCACAGCA
TCCAGAAGTCAGTGCGGGCGCTCTGGCAGCAGTTGGTGGCACAGAGGCGGCAGACCCTGGAGGA
TGCCTTCAAGATCGATCTGTCCGTGAAGGCTGGGGAAAGTGAAGTGAAGATCGAGGAGGTCACC
CCACTCTGGGAGGAGACGATGCTTAGAGCCTGGCAGCATTACTTAGCATCCGAGAAGAAGTCAC
TGGCCAGTCGCTCAAGTGTCACACACCACAGCAAAGCGACGTCCTGGAGTGGGAGCCTATCTTC
GGCCATGAGACTGATGCCCGGGCGGCAGGCAAAGGATCCCGAGTGCAGAGCAGAGGATTTTGTG
TCCTGTATAGAGAATTACAGAAGGAAAGGACAGGAGCTGTATGCATCCATATACAAGGACTACG
TGCAGAGGAGGAAAAGAGACAGTATCAAGGCAGCCACAGCCTGGGCCAGGATGCAGGAACAGCT
CTTTGGGGAGCTGGGATTGTGGGGCCGAATGAGAGAGTCCACGAGCTGCTCCCAGTGGGAACTG
GACAGGAGGGAAGGACCAGCTCGCATGAGGAAACGAATCAGACGGCTGTGTGCATGGGAGACCC
TGAACCTAGGCAGCTGCAAGGAGAGCCAAGACCAAAGGGGTGATGTTTCTCAGACAAATGCTGA
AAACCAAGTGTGTCCAGTTTTCAGGATTGCAGACGAGCTGACAATAGAGGAAGCCGAGAGCAGG
CCGGATGAAGTGGGAGTGGATTGCACCCAGTTGACCTTCTTCCCCGCTTTGCATGAAAGTTTGC
ACTCAGAAGACTTCTTGGAACTATGCCGGGAAAGACAGATCATTCTACAAGAGCTTCTTGATGG
AGAAAAGGTGTCACAGAAGGTCCCCATGGTGATCGTGCAGGGCCACCTGGTCTCAGAGGGGATC
CTGCTCTTTGGCCAGCAGCACTTCTACGTTTGTGAGAACTTCACTCTGTCTCCTACAGGCGATG
TCTACTGCACACACCATTGCTTATCCAATATCAGCGATCCTTTCATTTTCAACATGTGCAGCAA
AGACCGGTCCTCTGACCATTACTCCTGCCAGCGCCATGCCTACAGTGACCTCCGAGAGCTCCGG
CAGGCCCGCTTTCTCCTTCAGGATATTGCCCTGGAGATCTTCTTCCAAAATGGCTATTCCAAGC
TCCTTGTCTTCTACAACAGTGACCGGAGTAAAGCTTTCAAAAGCTTTTGCACTTTCCAACCAAG
TTTGAAAGGAAAAGGCACCACAGAGGACCCCTTCAACCTAAGGAGGCACCCAGGCTTCGATAGG
ACCATGCTGCAGAAGTGGCAGAAAAGGGAGATGAGCAATTTTGAATATCTTATGTACCTCAACA
CGCTGGCTGGAAGGACCTACAATGACTACATGCAGTATCCCGTGTTTCCCTGGGTCCTTGCCGA
CTACACATCAGAGATGTTGAACTTGACGAATCCCAAGACTTTCCGGGATCTTTCGAAGCCAATG
GGGGCTCAGAGCAAGGAAAGGAAGTTGAAATTTACCCAGCGGTTTAAAGACATTGAAAAGATCG
AAGGAGACATGACCGTGCAGTGCCACTACTATACCCACTATTCCTCAGCCATCATCGTCGCCTC
CTACTTGGTCCGAATGCCACCTTTCACGCAGGCCTTCTGCTCCCTACAGGGTGGAAGCTTTGAT
GTGGCTGACAGGATGTTCCACAGTGTAAAGAACACGTGGGAATCTGCCTCCAAAGAGAACATGA
GTGACGTCAGGGAGTTGACGCCTGAATTCTTCTACCTGCCCGAGTTTTTAACCAACTGTAATGC
AGTGGAGTTTGGTCGCATGCAGGATGGAACCACGCTGGGGGATGTGCAGCTCCCTCCCTGGGCT
GACGGGGATCCAAGGAAATTCATCAGCTTGCACAGACAGGCTCTGGAGAGTGACTTTGTCAGCA
GCAACCTCCACCACTGGATAGACCTAATCTTCGGGTATAAGCAGCAGGGACCAGCTGCGGTAGA
GGCAGTGAACACTTTCCACCCCTACTTCTATGGGGACAGAATAGACCTCAGCAGCATCACCGAC
CCCCTAATCAAGAGCACCATCCTGGGCTTCGTTAGCAACTTCGGACAGGTGCCCAAGCAGATCT
TCACTAAACCCCACCCATCCAGAAACACCACAGGGAAATCTCCAGTGCCCGGAAAGGAAACTTC
CACCCCCACAGGCCTTCCAGGCCACTCACAGTCCTTCCTCCACAGCCTGCCAGCGCTGAGACCC
TCTCAGGTCACAGTCAAAGATATGTATCTTTTCTCTCTAGGGTCGGAATCCCCTAAAGGGGCCA
TCGGCCACATCGTCCCTACTGAGAAGTCGATCCTAGCAGTGGAGAAGAACAAACTGCTGATGCC
TCCTCTCTGGAACAGGGTCTTCAGCTGGGGCTTTGATGACTTTACTTGCTGCCTGGGGAGCTAT
GGCTCTGACAAGATCTTGATGACGTTTGAGAACCTGGCTGCCTGGGGTCCCTGTCTGTGTGCTG
TATGCCCATCCCCTACAATGATCATCACGTCCGGGGCCAGTGCAGTGGTGTGCGTGTGGGAGCT
CAGCCTGGTCAAAGGTCGCCCAAAAGGCCTGAAACTCCGACAGGCCTTGTATGGACACACCCAG
GCTGTCACATGTCTGACAGCCTCTGTCACCTTCAGCCTCCTGGTGAGTGGATCCCAGGATTGCA
CTTGTATGCTGTGGGACCTAGACCACCTCTCTCGTGTGGCCTGCCTGCCTGTCCACCGGGAAGG
CATCTCAGCCGTTGCCATCAGTGATGTCTCGGGAACCATTGTCTCCTGTGCCGGAGCCCACTTG
TCCCTGTGGGACGTCAATGGACAGCCCCTGGCTAGTATTACCACAGCCTGGGGCCCAGAAGGAG
CCATAACCTGCTGCTGCATAGTGGAGAGGCCAGCGTGGGATGCAAGCCACGTTATCATCACGGG
CAGTAAGGACGGCATGGTTCGGATTTGGAAGACAGAGGACATGAAGATGTCCGTTCCCAGGCAG
GCAGTGATGGAGGAGCCCTCCACTGAGCCCCTAAGCCCCAGAGGTCACAAGTGGGCCAAGAATC
TTGCCCTGAGCCGAGAGCTGGATGTCAGCGTCGCTTTGAGTGGCAAGCCCAGCAAGGCAAGCCC
TGCCGTGACAGCTCTGGCCGTCACTAGGAACCAGGCCAAGCTCTTGGTGGGTGACGAGAAGGGA
AGAATCTTCTGCTGGTCTGCTGATGGGTAGGAGAAAAACAAGTGCCGGAGGTACCCTGGGGTCG
GCAGCAGCAAACTACAGGCACCAAGGTGATGCACAGGCTGGCTGTCTACGCAGAGCAAGCTTTG
GGGGGAGGCTCACCTCCCCACAGTTCTCAAGGACTGATGATTTGCACCGGGTACCCCAAACACG
TCTGCAGTCTACAAGACTTCTGTAAAAAGGATCCTGATAGACATTGATGCTGGGGACTGTCCTG
CTGGTGACAAGCTGAACAGGAAGTTTCCAAAACAAGAGGGTGGGTTTTGGGTCATGGAAACCAC
CCCGTTGTCTTTATTTTATTAAAACACCATTTTCCAAATGGCA

hide sequence

RefSeq Acc Id:

XM_006252762 ⟹ XP_006252824

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	8,228,147 - 8,456,777 (-)	NCBI
mRatBN7.2	16	8,221,853 - 8,450,494 (-)	NCBI
Rnor_6.0	16	9,194,446 - 9,430,764 (-)	NCBI
Rnor_5.0	16	11,157,412 - 11,391,121 (-)	NCBI

Sequence:

show sequence

AATGAAGAGAAACCCAGCACAAGTGATTCATAATGAAACACTGTTGTTGATGGCTGCCATGCGA
GGCCAGGTCCTCGTTCTGTTCCCCTGAGCTGAGCCACTGGAGCCTGGGGATGGAGGCACCCACA
CCATGTGACATCCGCAGACTTTGAATGCCACCCCTCCAGATCTGCTTTGCCAACAATGGAGGCT
GAAGATTGTTCAAAGGCTGAGGATAGACCAGAAGACCCAGGTTTCCAAAATGAAGGACAGTCTT
CTGCTGTGAAGCCCACCTTTTCACTAGAAGAGCAGTCTCCTGGCCCCACTGTCCTCTGGGACAT
GCTTGAACAGAAATTTCTGGAATATCAGCAGCTGATTCACAAGAACCCAGAGGAACGTCGGCGA
AACCTCCTGAGCCTTCTCCCCCTCTTCCTAAAGGCCTGGGAACATTCTGTGGGCATCATCTGCT
TTCGCAGTCTTCAAAGACTGGCAGAAGATGTGTCCGACCAACTTGCCCAAGAAATACAACAGGC
ACTTTCCGGGAAGCCTGCAGAGCAAGCCCGGGCTGCAGCCGGGCAGCTACTGCAGTGGAAGAGT
GACGTGGATCAGGATGGCTACTTGCTCCTCAAGTCGGTGTATGTGCTCACGGGGACAGACTCGG
AGACGCTGGGCAGAGTGGTGGATTCAGGGCTTCCGGCCCTTCTCCTGCAGTGCCTGTATCTCTT
TTTTGCTTTTCCCGTGGAAAAGGGTGAGCATTTGGAGATTGACGTTCAAGGGCAGAGGATGTTT
GTGCAGATGTTGTTAAACATTTGCAGCGAGTCTCAGGGTCTGGAGGGACTTCTCTCAGGAAGCG
AGCTCCAGTCTCTACTGATCGCTACCACCTGTCTGAGGGAACACAGCTGCTACTTCTGGAAACA
GCCTACCTTCTGTGTGCTGCGGGCTATCTCCAAGGCTCAGAGCCCTAGCGTCATCCAATATCTG
CGAACTGCCGACTGTGTCCGGCTCTCGGTTCAGAACCTCTCCAAGCTGGCAGACACTCTCCCTG
CACCGGAGGTGAGCGAGGCAGTGAGCCTCATCCTGAACTTTGTGAGAGACTCCTACCCCATCTC
CTCTGCGCTGCTCCTGGAGTTTGAGAATGGGGAGGGCTACCCTCTGCTACTCAAGGTGCTGCTG
CGGTATAACGGGGTGACCCAGGGTGTGGTGGAACCCCATCTCGAGGAGCTCATCGAGCTGGTGA
TGTGGCTGACGACTTGTGGGAGGTCAGAGCTGAAGGTGTTTGACAGCATCACTTATCCTCAGCT
TGAAGGCTTCAAGTTCCATCAGGAGGCTTCTGGGGTGACCGTTAAGAATCTCCAGGCCTTTCAG
GTCCTGCAGAATCTTTTCCACAGAGCCAGTGACTCTGTCCTTTGCATCCAAGTGCTTCTGGCCA
TCAAGACCATGTGGGCCTGGAACCCTCGCAATTTCTTCCTGCTGGAGTGGACCCTGCAGCCCAT
CTCACAGTTTGTAGAGATCATTCCCCTGAAGCCCACCCCGGTGCAAGAACACTTTTTCCAGCTG
TTGGAGACTCTGGTGTTCAAGCTACTCTATGTGCCACATGAGGTCCTGGCTAAAGTGCAGGGTC
TGATCAAGGACAGCCAAGAGCTCTCCTGCACCCTCGTGGCCTTGCGAAGCATCCTCAGGATCAC
AGCCAGTGACCGGCTCTTCACTGACATCTTCCGGGACTCAGGACTACTAGGCCTGCTGCTGGCC
CAGCTACGGAAACAGGCCAAGATCATGAGGAAGTCAGGAAACAAAGAGTGCAGTCCTGGCGTGC
AGGATCTGGAGAGGGAACTCACCTGCGTGATGCTGAAGACTGTGGTCGCGCTTCTGCAAGGTTC
TGTTCGAAATGCAGTTGTCCTCAAAGACCACGGCATGGTGCCCTTCATCAAGATCTTCCTGGAT
GATGAATGCTACCGGGGTTCCGCCCTCAGCATCTTGGAGCAGCTCTCAGTCATCAACGCTGAGG
AGTACATGAGCATCATTGTGGGGGCTTTGTGTTCGTCTACTCAGGGGGAGCTGCAGCTGAAGCT
GGATCTTCTCAAGTCTCTGCTCCGGATCCTGGAGACACCCAAGGGCCATGCTGCATTCCGTGTC
TCCAGTGGCTTCAATGGGCTACTGTCCCTGCTTTCTGACCTGGAGGGGTCCCTCCAGCTGCCTG
CAGTGACAACATGCAGTGCAGTGTCCCCCAGCCAGACCCTGGAGCTGGTGTTGCATACCCTTTG
TGTGGTGTCTGCTGCTCTGCACTTGGACCCTGTCAACAAGCACTTCTTCAGGAGCAATGGGCTC
TTTGAGAAGTTGGCCGAGGACCTCTGTCTGCTGGGCTGTTTTGGGGCCCCAGAGGAAGAAGGCG
CTCAACGGTACTCTTCATCTGACATGAAAGCCAGGCCCTTCGTGGATTTACTGAGCGGGGCCTT
TTCCTCCAGCTGCCAGTTCCCACCCAGGGTGCAGAGCTGCCTACAGATTCTCAGCTTCCTAGAA
AGCATGGCCGGTGGTACCCTCCACCTGCACAGAGACCTGATGGAGCCATCCAAGGCTGGGCAGG
TGCCTTCTTTGGATGCCAGAAAGGGAGAGCCTGGGAGCCGCCAAGGCAAATTCAAGCAGTGGCC
AGACCCGGAGGAGAGGATGGATGAAGGTGACGTCACGATCATGCACCCTGGGATCATTTGCATC
ATGGTGAGACTGCTGCCTCGCCTATACCTTGGCGATCACCCACAGCTCTCCGAGGAGATCCAGT
GTTCAATGGCCCATCACCTCTTGTCCCTGGTGAAGTCAGAGAAGAACCGCCAGGTCATGTGCGA
GGCAGGGATGCTCCGGACACTCATGACCTTTTGCCACAGGACCCTCAGCACGGGTGGCAGCGCC
CTGCACTCGGTTCTCATCAGGATCTTTGAAAAGCTTGGTTCTCAAGCCATCGAGCCAGATGTGC
TAAGACAGTTCCTAGACCTTGGAGTTCGCCCACCTCCGTCAACTGCCAGGAAAAGCCTCCATTT
ATCTCCTGGGCATGAAGACGGTCCTGGACGCTCAGGGTCACTGGCAGATACATCTGTGAAATCT
ACACATGCCAGCCCATGTCCTAGAGGGTCTCAGGACCTCAGGTCCTCACCAACCTCCGAGGATT
CGGCCACAGCCCTCCAGACAACACTGAGCCTCATCTCCATGACCTCCCCGCGCAATCTGCAGTC
CCAGAGGGCAGCCCTGACTCCGTCGTTTGTGGAATTTGACATGTCTGCAGAAGGCTATGGCTGT
CTGTTTATTCCGACCTTGTCTACAGTCATGGGGACCAGCACAGAGCACTCCATCTCTGGAGGGA
CTGGATCAGGAGCTCCCAGGCCATTCCCTCCACCTGGAGGTCTCACCTTCTCCTGTTGGTTTCT
GATCAGCCGGCAGGCCAATGTCATGGAGGGCCACCCACTGCGCTTTCTAACCCTGGTGCGTCAC
CTGGCCAGGACAGAGCAGCCCTTTGTCTGCTTCTCCGTCAGCCTCTGCATGGATGACCTCTCCT
TGGTCGTGTCCACAGAAGAGAAAGAGTTCCAACCCCTGGATATCATGGAGCCTGAGGATGAGGC
AGAGCCCTCAGCAGGCCGTCAGCTCCAGGTCAGGTGTAGCCAGCTGCTGGCTTGCGGTCAGTGG
TATCACCTGGCTGTGGTGGTCAGCAAAGAAATGAAAAGGAACTGCACTGTCACCATGTACCTGG
ATGGACAAGCCATCGGTTCAGCCAAGATGTTATATATTCAAGCCTTACCGGGGTCTTTTTTTTC
AATGGATCCATCATCATTCGTGGACGTTTATGGCTATATTGGAACCCCCAGAGTTTGGAAACAA
AAATCATCCTTAACCTGGCGTCTCGGGCCCGCCTACCTCTTTGAGGAAGACATATCGCCGGATA
CTCTAGAACTTATTATCAAACTCGGCCCGAGGTACTGTGGTAACTTTCAGGCTGTGCACCTTCA
AGGAGATGTCCCAGATGGTGAAGCCACACCCCTCATCTCGGAGGAAAGGGTTTCCTTTGGTCTT
TATGTACCCAGCTCTTCTATCACCAGCATAATAAACATCAGAAACACCTACAATGAGGTGGACA
GCCGCCTGATCGCCAAGGAGATGAACATTTCCTCCCGTGACAATGCCACGCCCGTGTTCTTGCT
GAGGAACTGTGCTGGGCACCTTTTCGGGTCTTTGCGGACCCTTGGTGCTGTTGCTGTAGGCCAG
TTAGGGGTGAGGGTGTTCCATTCCAGCCCTGCTGCCAGCAGCCTGGACTACATTGGAGGGCCTG
CCATCCTCCTAGGCCTCATCTCCCTGGCAACAGATGACCACACCATGTATGCAGCTATGAAAGT
CCTGCACTCGGTCCTGACCAGCAATGCCATGTGTGATTACCTGATGCAGCACATCGATGGGTAC
CAGATCTTAGCCTTTCTCCTGCGGAAGAAGACGCCCTTTCTAAACCACCGCATTTTCCAGTTGA
TCCTCTCGGTGGCCGGCACAGCGGAGCTGGGTTTCCGGCCGTCTGCTGTCACTAACATGTGTAT
CTTCCGGCATGTGCTCTGCAATTTTGAGCTCTGGACAAACACTGCAGACAACTTGGAGCTCACT
CTCTTTTCCCATCTCCTGGAGATCCTTCAGTCACCAAGAGAAGGACCCAGGAATGCGGAAAGAG
CCCACCAGGCACAGTTGGTGCCTAAGCTCATATTTCTCTTCAACGAGCCGAGTCTGGCTCTGTC
CAAGGTCTCCACCATCATTGCCATCCTGGGCTGTCAGCTGAAGGGCCACTTCAACATCCAAGAC
TTACTCAGGGTTGGGCTGTTTGTCATATACACCCTCAAGCCGTCATCGGTGAACGAGAGGCAGA
TCTGCCTGGATGGAGTCCAGGACCCCTCTGCACCTGCTGGAAGCCAAACATCTGGAAAGGCAAT
CTGGCTTAGAAACCAGTTGCTGGAGATGCTGTTTGGTGTAATAACTGCCCCCCAACTTCATCTG
TCCTCTGAGTTAAAGGAGCAGGTGTTTCTGAGCCTGGGGCCCGACTGGTTCCTGCTGCTCCTAC
AGGGTCACCTGCATCCCAGCACCACCACACTGGCGTTGAAGCTGCTGCTGTATTTTCTGTCAAG
CCCTTCCCTCTGTGGGCGATTTAGAGATGGCCTGTCTGCAGGATGCTGGGTAGAGAGCTGCCTG
GAGGGGGTGGACATTATGATGGACAACCTGAAGAACCACCCTGCAGTTCCTGACCAGAGCCCCT
GCCTGCTTCCCGGGTTCCGGGTCTTGAATGACTTTCTGGGCTACCATGTTCTCATTCCGGAAGT
CTACCTCATCGTGTCTGCCTTCTTCCTCCAGATGCCACTTACAGAGTTGACCGACGGGCCCAGA
GAGAGCTTGGATTTGATGATTCAGTGGCTTCTCCAGAAACATTACCAGCAAGAAGTCCTCCAGG
CCGGGCTGTGCATAGAAGGCGCCCTGCTTCTCCTGGGGATGCTAAAAGCCATCATGAGCCAGCC
CCGTGCAGGTTCAGGAGACGGTACCTGGGAGCAGACACTCCCCAGCAGTATTCTTCAGTTCCTC
GGCCTGGTGCACCGCTCCTACCCTCAGGATCCAGCATGGAGGAGCCCTGACTTCCTCCAGACCA
TGGCTATCATCACTTTCTCCGTGGAAACCCAGAAGGAGGCCACGTCTGAGTCCTCTAGAAACAC
CAGTCGTCCTGGGTCCTCTGCTGAAGCCAGCCATTCTGCTGAGGGGTTCCAAGCTTCTTTCAAG
CCACATCCAGCTCAGAGGCAGCTGAGAGAGTTCATGCAAGTTCTCCTGAGGGAGCTGCTCTTTG
GAGTGTCCAGCCCCAAGCAGTGGCTGCCCTTGGAGGTCCTTCTGGAGGCTTCTCCAGATGGTGC
CACCAGCCAGCAGAAGCGAGACTTCCAATCCGAGGTCCTACTTTCCACCATGGACATATTCCAC
GTCCCAAGTGGGAGTGGCACGCCGACCCTAAGAGGCAGTAAGGAGCCTCAGTCAAATGCAGAAG
CTGGTACTGTGCCTTCCCTTGCAAGCGTTTCCTACTTTACCCAGAAGCTCGTTGAGAAGCTGCA
CAGTGGGATGTTCTCAGCAAATCCAAAGCACATCCTCCTCTTCATCACAGAGCACATCATATCG
GTCATTGAGAACCCATCTTCCCAAAAGGACACTGTCATGAGTGCGTTATATAGCAGTTTGAATA
AAGTCATCCTGCACTGCCTCTCCAAGCCCCAGCAGTCCCTGTCTGAGTGCCTTGGCCTCCTCAG
CATCCTGGACTTCCTACAGGAACAGTGGGACATCATCTTTGCCACCTACAATTCCAATGTCAAC
TTCCTCCTGTGCCTCATGCATTGTCTTTTGCTGCTGAATGCCAGGAGTTATCCGGAAGGATTTG
GATTGGAGCCCAAGCCCAGAATTAATCCTTACCACCAAGTCTTCCTTTCTCCAAGTGAAGAAGT
GAAAGATAAGAAGGAGGAGGGCCTCCCAAGTCTGGGCGATGTCCAGCACAGCATCCAGAAGTCA
GTGCGGGCGCTCTGGCAGCAGTTGGTGGCACAGAGGCGGCAGACCCTGGAGGATGCCTTCAAGA
TCGATCTGTCCGTGAAGGCTGGGGAAAGTGAAGTGAAGATCGAGGAGGTCACCCCACTCTGGGA
GGAGACGATGCTTAGAGCCTGGCAGCATTACTTAGCATCCGAGAAGAAGTCACTGGCCAGTCGC
TCAAGTGTCACACACCACAGCAAAGCGACGTCCTGGAGTGGGAGCCTATCTTCGGCCATGAGAC
TGATGCCCGGGCGGCAGGCAAAGGATCCCGAGTGCAGAGCAGAGGATTTTGTGTCCTGTATAGA
GAATTACAGAAGGAAAGGACAGGAGCTGTATGCATCCATATACAAGGACTACGTGCAGAGGAGG
AAAAGAGACAGTATCAAGGCAGCCACAGCCTGGGCCAGGATGCAGGAACAGCTCTTTGGGGAGC
TGGGATTGTGGGGCCGAATGAGAGAGTCCACGAGCTGCTCCCAGTGGGAACTGGACAGGAGGGA
AGGACCAGCTCGCATGAGGAAACGAATCAGACGGCTGTGTGCATGGGAGACCCTGAACCTAGGC
AGCTGCAAGGAGAGCCAAGACCAAAGGGGTGATGTTTCTCAGACAAATGCTGAAAACCAAGTGT
GTCCAGTTTTCAGGATTGCAGACGAGCTGACAATAGAGGAAGCCGAGAGCAGGCCGGATGAAGT
GGGAGTGGATTGCACCCAGTTGACCTTCTTCCCCGCTTTGCATGAAAGTTTGCACTCAGAAGAC
TTCTTGGAACTATGCCGGGAAAGACAGATCATTCTACAAGAGCTTCTTGATGGAGAAAAGGTGT
CACAGAAGGTCCCCATGGTGATCGTGCAGGGCCACCTGGTCTCAGAGGGGATCCTGCTCTTTGG
CCAGCAGCACTTCTACGTTTGTGAGAACTTCACTCTGTCTCCTACAGGCGATGTCTACTGCACA
CACCATTGCTTATCCAATATCAGCGATCCTTTCATTTTCAACATGTGCAGCAAAGACCGGTCCT
CTGACCATTACTCCTGCCAGCGCCATGCCTACAGTGACCTCCGAGAGCTCCGGCAGGCCCGCTT
TCTCCTTCAGGATATTGCCCTGGAGATCTTCTTCCAAAATGGCTATTCCAAGCTCCTTGTCTTC
TACAACAGTGACCGGAGTAAAGCTTTCAAAAGCTTTTGCACTTTCCAACCAAGTTTGAAAGGAA
AAGGCACCACAGAGGACCCCTTCAACCTAAGGAGGCACCCAGGCTTCGATAGGACCATGCTGCA
GAAGTGGCAGAAAAGGGAGATGAGCAATTTTGAATATCTTATGTACCTCAACACGCTGGCTGGA
AGGACCTACAATGACTACATGCAGTATCCCGTGTTTCCCTGGGTCCTTGCCGACTACACATCAG
AGATGTTGAACTTGACGAATCCCAAGACTTTCCGGGATCTTTCGAAGCCAATGGGGGCTCAGAG
CAAGGAAAGGAAGTTGAAATTTACCCAGCGGTTTAAAGACATTGAAAAGATCGAAGGAGACATG
ACCGTGCAGTGCCACTACTATACCCACTATTCCTCAGCCATCATCGTCGCCTCCTACTTGGTCC
GAATGCCACCTTTCACGCAGGCCTTCTGCTCCCTACAGGGTGGAAGCTTTGATGTGGCTGACAG
GATGTTCCACAGTGTAAAGAACACGTGGGAATCTGCCTCCAAAGAGAACATGAGTGACGTCAGG
GAGTTGACGCCTGAATTCTTCTACCTGCCCGAGTTTTTAACCAACTGTAATGCAGTGGAGTTTG
GTCGCATGCAGGATGGAACCACGCTGGGGGATGTGCAGCTCCCTCCCTGGGCTGACGGGGATCC
AAGGAAATTCATCAGCTTGCACAGACAGGCTCTGGAGAGTGACTTTGTCAGCAGCAACCTCCAC
CACTGGATAGACCTAATCTTCGGGTATAAGCAGCAGGGACCAGCTGCGGTAGAGGCAGTGAACA
CTTTCCACCCCTACTTCTATGGGGACAGAATAGACCTCAGCAGCATCACCGACCCCCTAATCAA
GAGCACCATCCTGGGCTTCGTTAGCAACTTCGGACAGGTGCCCAAGCAGATCTTCACTAAACCC
CACCCATCCAGAAACACCACAGGGAAATCTCCAGTGCCCGGAAAGGAAACTTCCACCCCCACAG
GCCTTCCAGGCCACTCACAGTCCTTCCTCCACAGCCTGCCAGCGCTGAGACCCTCTCAGGTCAC
AGTCAAAGGGTCGGAATCCCCTAAAGGGGCCATCGGCCACATCGTCCCTACTGAGAAGTCGATC
CTAGCAGTGGAGAAGAACAAACTGCTGATGCCTCCTCTCTGGAACAGGGTCTTCAGCTGGGGCT
TTGATGACTTTACTTGCTGCCTGGGGAGCTATGGCTCTGACAAGATCTTGATGACGTTTGAGAA
CCTGGCTGCCTGGGGTCCCTGTCTGTGTGCTGTATGCCCATCCCCTACAATGATCATCACGTCC
GGGGCCAGTGCAGTGGTGTGCGTGTGGGAGCTCAGCCTGGTCAAAGGTCGCCCAAAAGGCCTGA
AACTCCGACAGGCCTTGTATGGACACACCCAGGCTGTCACATGTCTGACAGCCTCTGTCACCTT
CAGCCTCCTGGTGAGTGGATCCCAGGATTGCACTTGTATGCTGTGGGACCTAGACCACCTCTCT
CGTGTGGCCTGCCTGCCTGTCCACCGGGAAGGCATCTCAGCCGTTGCCATCAGTGATGTCTCGG
GAACCATTGTCTCCTGTGCCGGAGCCCACTTGTCCCTGTGGGACGTCAATGGACAGCCCCTGGC
TAGTATTACCACAGCCTGGGGCCCAGAAGGAGCCATAACCTGCTGCTGCATAGTGGAGAGGCCA
GCGTGGGATGCAAGCCACGTTATCATCACGGGCAGTAAGGACGGCATGGTTCGGATTTGGAAGA
CAGAGGACATGAAGATGTCCGTTCCCAGGCAGGCAGTGATGGAGGAGCCCTCCACTGAGCCCCT
AAGCCCCAGAGGTCACAAGTGGGCCAAGAATCTTGCCCTGAGCCGAGAGCTGGATGTCAGCGTC
GCTTTGAGTGGCAAGCCCAGCAAGGCAAGCCCTGCCGTGACAGCTCTGGCCGTCACTAGGAACC
AGGCCAAGCTCTTGGTGGGTGACGAGAAGGGAAGAATCTTCTGCTGGTCTGCTGATGGGTAGGA
GAAAAACAAGTGCCGGAGGTACCCTGGGGTCGGCAGCAGCAAACTACAGGCACCAAGGTGATGC
ACAGGCTGGCTGTCTACGCAGAGCAAGCTTTGGGGGGAGGCTCACCTCCCCACAGTTCTCAAGG
ACTGATGATTTGCACCGGGTACCCCAAACACGTCTGCAGTCTACAAGACTTCTGTAAAAAGGAT
CCTGATAGACATTGATGCTGGGGACTGTCCTGCTGGTGACAAGCTGAACAGGAAGTTTCCAAAA
CAAGAGGGTGGGTTTTGGGTCATGGAAACCACCCCGTTGTCTTTATTTTATTAAAACACCATTT
TCCAAATGGCA

hide sequence

RefSeq Acc Id:

XM_039095074 ⟹ XP_038951002

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	8,228,147 - 8,456,777 (-)	NCBI
mRatBN7.2	16	8,221,853 - 8,450,494 (-)	NCBI

RefSeq Acc Id:

XM_039095075 ⟹ XP_038951003

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	8,228,147 - 8,456,777 (-)	NCBI
mRatBN7.2	16	8,221,853 - 8,450,494 (-)	NCBI

RefSeq Acc Id:

XM_039095077 ⟹ XP_038951005

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	8,228,147 - 8,456,777 (-)	NCBI
mRatBN7.2	16	8,221,853 - 8,450,494 (-)	NCBI

RefSeq Acc Id:

XM_039095079 ⟹ XP_038951007

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	8,393,136 - 8,456,777 (-)	NCBI
mRatBN7.2	16	8,383,846 - 8,450,494 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001414587	(Get FASTA)	NCBI Sequence Viewer
	XP_006252822	(Get FASTA)	NCBI Sequence Viewer
	XP_006252824	(Get FASTA)	NCBI Sequence Viewer
	XP_038951002	(Get FASTA)	NCBI Sequence Viewer
	XP_038951003	(Get FASTA)	NCBI Sequence Viewer
	XP_038951005	(Get FASTA)	NCBI Sequence Viewer
	XP_038951007	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000042082.5
	ENSRNOP00000081102.1
	ENSRNOP00000086747.1

RefSeq Acc Id:	XP_006252824 ⟸ XM_006252762
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I6GFA1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEAEDCSKAEDRPEDPGFQNEGQSSAVKPTFSLEEQSPGPTVLWDMLEQKFLEYQQLIHKNPEE RRRNLLSLLPLFLKAWEHSVGIICFRSLQRLAEDVSDQLAQEIQQALSGKPAEQARAAAGQLLQ WKSDVDQDGYLLLKSVYVLTGTDSETLGRVVDSGLPALLLQCLYLFFAFPVEKGEHLEIDVQGQ RMFVQMLLNICSESQGLEGLLSGSELQSLLIATTCLREHSCYFWKQPTFCVLRAISKAQSPSVI QYLRTADCVRLSVQNLSKLADTLPAPEVSEAVSLILNFVRDSYPISSALLLEFENGEGYPLLLK VLLRYNGVTQGVVEPHLEELIELVMWLTTCGRSELKVFDSITYPQLEGFKFHQEASGVTVKNLQ AFQVLQNLFHRASDSVLCIQVLLAIKTMWAWNPRNFFLLEWTLQPISQFVEIIPLKPTPVQEHF FQLLETLVFKLLYVPHEVLAKVQGLIKDSQELSCTLVALRSILRITASDRLFTDIFRDSGLLGL LLAQLRKQAKIMRKSGNKECSPGVQDLERELTCVMLKTVVALLQGSVRNAVVLKDHGMVPFIKI FLDDECYRGSALSILEQLSVINAEEYMSIIVGALCSSTQGELQLKLDLLKSLLRILETPKGHAA FRVSSGFNGLLSLLSDLEGSLQLPAVTTCSAVSPSQTLELVLHTLCVVSAALHLDPVNKHFFRS NGLFEKLAEDLCLLGCFGAPEEEGAQRYSSSDMKARPFVDLLSGAFSSSCQFPPRVQSCLQILS FLESMAGGTLHLHRDLMEPSKAGQVPSLDARKGEPGSRQGKFKQWPDPEERMDEGDVTIMHPGI ICIMVRLLPRLYLGDHPQLSEEIQCSMAHHLLSLVKSEKNRQVMCEAGMLRTLMTFCHRTLSTG GSALHSVLIRIFEKLGSQAIEPDVLRQFLDLGVRPPPSTARKSLHLSPGHEDGPGRSGSLADTS VKSTHASPCPRGSQDLRSSPTSEDSATALQTTLSLISMTSPRNLQSQRAALTPSFVEFDMSAEG YGCLFIPTLSTVMGTSTEHSISGGTGSGAPRPFPPPGGLTFSCWFLISRQANVMEGHPLRFLTL VRHLARTEQPFVCFSVSLCMDDLSLVVSTEEKEFQPLDIMEPEDEAEPSAGRQLQVRCSQLLAC GQWYHLAVVVSKEMKRNCTVTMYLDGQAIGSAKMLYIQALPGSFFSMDPSSFVDVYGYIGTPRV WKQKSSLTWRLGPAYLFEEDISPDTLELIIKLGPRYCGNFQAVHLQGDVPDGEATPLISEERVS FGLYVPSSSITSIINIRNTYNEVDSRLIAKEMNISSRDNATPVFLLRNCAGHLFGSLRTLGAVA VGQLGVRVFHSSPAASSLDYIGGPAILLGLISLATDDHTMYAAMKVLHSVLTSNAMCDYLMQHI DGYQILAFLLRKKTPFLNHRIFQLILSVAGTAELGFRPSAVTNMCIFRHVLCNFELWTNTADNL ELTLFSHLLEILQSPREGPRNAERAHQAQLVPKLIFLFNEPSLALSKVSTIIAILGCQLKGHFN IQDLLRVGLFVIYTLKPSSVNERQICLDGVQDPSAPAGSQTSGKAIWLRNQLLEMLFGVITAPQ LHLSSELKEQVFLSLGPDWFLLLLQGHLHPSTTTLALKLLLYFLSSPSLCGRFRDGLSAGCWVE SCLEGVDIMMDNLKNHPAVPDQSPCLLPGFRVLNDFLGYHVLIPEVYLIVSAFFLQMPLTELTD GPRESLDLMIQWLLQKHYQQEVLQAGLCIEGALLLLGMLKAIMSQPRAGSGDGTWEQTLPSSIL QFLGLVHRSYPQDPAWRSPDFLQTMAIITFSVETQKEATSESSRNTSRPGSSAEASHSAEGFQA SFKPHPAQRQLREFMQVLLRELLFGVSSPKQWLPLEVLLEASPDGATSQQKRDFQSEVLLSTMD IFHVPSGSGTPTLRGSKEPQSNAEAGTVPSLASVSYFTQKLVEKLHSGMFSANPKHILLFITEH IISVIENPSSQKDTVMSALYSSLNKVILHCLSKPQQSLSECLGLLSILDFLQEQWDIIFATYNS NVNFLLCLMHCLLLLNARSYPEGFGLEPKPRINPYHQVFLSPSEEVKDKKEEGLPSLGDVQHSI QKSVRALWQQLVAQRRQTLEDAFKIDLSVKAGESEVKIEEVTPLWEETMLRAWQHYLASEKKSL ASRSSVTHHSKATSWSGSLSSAMRLMPGRQAKDPECRAEDFVSCIENYRRKGQELYASIYKDYV QRRKRDSIKAATAWARMQEQLFGELGLWGRMRESTSCSQWELDRREGPARMRKRIRRLCAWETL NLGSCKESQDQRGDVSQTNAENQVCPVFRIADELTIEEAESRPDEVGVDCTQLTFFPALHESLH SEDFLELCRERQIILQELLDGEKVSQKVPMVIVQGHLVSEGILLFGQQHFYVCENFTLSPTGDV YCTHHCLSNISDPFIFNMCSKDRSSDHYSCQRHAYSDLRELRQARFLLQDIALEIFFQNGYSKL LVFYNSDRSKAFKSFCTFQPSLKGKGTTEDPFNLRRHPGFDRTMLQKWQKREMSNFEYLMYLNT LAGRTYNDYMQYPVFPWVLADYTSEMLNLTNPKTFRDLSKPMGAQSKERKLKFTQRFKDIEKIE GDMTVQCHYYTHYSSAIIVASYLVRMPPFTQAFCSLQGGSFDVADRMFHSVKNTWESASKENMS DVRELTPEFFYLPEFLTNCNAVEFGRMQDGTTLGDVQLPPWADGDPRKFISLHRQALESDFVSS NLHHWIDLIFGYKQQGPAAVEAVNTFHPYFYGDRIDLSSITDPLIKSTILGFVSNFGQVPKQIF TKPHPSRNTTGKSPVPGKETSTPTGLPGHSQSFLHSLPALRPSQVTVKGSESPKGAIGHIVPTE KSILAVEKNKLLMPPLWNRVFSWGFDDFTCCLGSYGSDKILMTFENLAAWGPCLCAVCPSPTMI ITSGASAVVCVWELSLVKGRPKGLKLRQALYGHTQAVTCLTASVTFSLLVSGSQDCTCMLWDLD HLSRVACLPVHREGISAVAISDVSGTIVSCAGAHLSLWDVNGQPLASITTAWGPEGAITCCCIV ERPAWDASHVIITGSKDGMVRIWKTEDMKMSVPRQAVMEEPSTEPLSPRGHKWAKNLALSRELD VSVALSGKPSKASPAVTALAVTRNQAKLLVGDEKGRIFCWSADG hide sequence

RefSeq Acc Id:	XP_006252822 ⟸ XM_006252760
- Peptide Label:	isoform X1
- UniProtKB:	D4A748 (UniProtKB/TrEMBL), A0A8I6GFA1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEAEDCSKAEDRPEDPGFQNEGQSSAVKPTFSLEEQSPGPTVLWDMLEQKFLEYQQLIHKNPEE RRRNLLSLLPLFLKAWEHSVGIICFRSLQRLAEDVSDQLAQEIQQALSGKPAEQARAAAGQLLQ WKSDVDQDGYLLLKSVYVLTGTDSETLGRVVDSGLPALLLQCLYLFFAFPVEKGEHLEIDVQGQ RMFVQMLLNICSESQGLEGLLSGSELQSLLIATTCLREHSCYFWKQPTFCVLRAISKAQSPSVI QYLRTADCVRLSVQNLSKLADTLPAPEVSEAVSLILNFVRDSYPISSALLLEFENGEGYPLLLK VLLRYNGVTQGVVEPHLEELIELVMWLTTCGRSELKVFDSITYPQLEGFKFHQEASGVTVKNLQ AFQVLQNLFHRASDSVLCIQVLLAIKTMWAWNPRNFFLLEWTLQPISQFVEIIPLKPTPVQEHF FQLLETLVFKLLYVPHEVLAKVQGLIKDSQELSCTLVALRSILRITASDRLFTDIFRDSGLLGL LLAQLRKQAKIMRKSGNKECSPGVQDLERELTCVMLKTVVALLQGSVRNAVVLKDHGMVPFIKI FLDDECYRGSALSILEQLSVINAEEYMSIIVGALCSSTQGELQLKLDLLKSLLRILETPKGHAA FRVSSGFNGLLSLLSDLEGSLQLPAVTTCSAVSPSQTLELVLHTLCVVSAALHLDPVNKHFFRS NGLFEKLAEDLCLLGCFGAPEEEGAQRYSSSDMKARPFVDLLSGAFSSSCQFPPRVQSCLQILS FLESMAGGTLHLHRDLMEPSKAGQVPSLDARKGEPGSRQGKFKQWPDPEERMDEGDVTIMHPGI ICIMVRLLPRLYLGDHPQLSEEIQCSMAHHLLSLVKSEKNRQVMCEAGMLRTLMTFCHRTLSTG GSALHSVLIRIFEKLGSQAIEPDVLRQFLDLGVRPPPSTARKSLHLSPGHEDGPGRSGSLADTS VKSTHASPCPRGSQDLRSSPTSEDSATALQTTLSLISMTSPRNLQSQRAALTPSFVEFDMSAEG YGCLFIPTLSTVMGTSTEHSISGGTGSGAPRPFPPPGGLTFSCWFLISRQANVMEGHPLRFLTL VRHLARTEQPFVCFSVSLCMDDLSLVVSTEEKEFQPLDIMEPEDEAEPSAGRQLQVRCSQLLAC GQWYHLAVVVSKEMKRNCTVTMYLDGQAIGSAKMLYIQALPGSFFSMDPSSFVDVYGYIGTPRV WKQKSSLTWRLGPAYLFEEDISPDTLELIIKLGPRYCGNFQAVHLQGDVPDGEATPLISEERVS FGLYVPSSSITSIINIRNTYNEVDSRLIAKEMNISSRDNATPVFLLRNCAGHLFGSLRTLGAVA VGQLGVRVFHSSPAASSLDYIGGPAILLGLISLATDDHTMYAAMKVLHSVLTSNAMCDYLMQHI DGYQILAFLLRKKTPFLNHRIFQLILSVAGTAELGFRPSAVTNMCIFRHVLCNFELWTNTADNL ELTLFSHLLEILQSPREGPRNAERAHQAQLVPKLIFLFNEPSLALSKVSTIIAILGCQLKGHFN IQDLLRVGLFVIYTLKPSSVNERQICLDGVQDPSAPAGSQTSGKAIWLRNQLLEMLFGVITAPQ LHLSSELKEQVFLSLGPDWFLLLLQGHLHPSTTTLALKLLLYFLSSPSLCGRFRDGLSAGCWVE SCLEGVDIMMDNLKNHPAVPDQSPCLLPGFRVLNDFLGYHVLIPEVYLIVSAFFLQMPLTELTD GPRESLDLMIQWLLQKHYQQEVLQAGLCIEGALLLLGMLKAIMSQPRAGSGDGTWEQTLPSSIL QFLGLVHRSYPQDPAWRSPDFLQTMAIITFSVETQKEATSESSRNTSRPGSSAEASHSAEGFQA SFKPHPAQRQLREFMQVLLRELLFGVSSPKQWLPLEVLLEASPDGATSQQKRDFQSEVLLSTMD IFHVPSGSGTPTLRGSKEPQSNAEAGTVPSLASVSYFTQKLVEKLHSGMFSANPKHILLFITEH IISVIENPSSQKDTVMSALYSSLNKVILHCLSKPQQSLSECLGLLSILDFLQEQWDIIFATYNS NVNFLLCLMHCLLLLNARSYPEGFGLEPKPRINPYHQVFLSPSEEVKDKKEEGLPSLGDVQHSI QKSVRALWQQLVAQRRQTLEDAFKIDLSVKAGESEVKIEEVTPLWEETMLRAWQHYLASEKKSL ASRSSVTHHSKATSWSGSLSSAMRLMPGRQAKDPECRAEDFVSCIENYRRKGQELYASIYKDYV QRRKRDSIKAATAWARMQEQLFGELGLWGRMRESTSCSQWELDRREGPARMRKRIRRLCAWETL NLGSCKESQDQRGDVSQTNAENQVCPVFRIADELTIEEAESRPDEVGVDCTQLTFFPALHESLH SEDFLELCRERQIILQELLDGEKVSQKVPMVIVQGHLVSEGILLFGQQHFYVCENFTLSPTGDV YCTHHCLSNISDPFIFNMCSKDRSSDHYSCQRHAYSDLRELRQARFLLQDIALEIFFQNGYSKL LVFYNSDRSKAFKSFCTFQPSLKGKGTTEDPFNLRRHPGFDRTMLQKWQKREMSNFEYLMYLNT LAGRTYNDYMQYPVFPWVLADYTSEMLNLTNPKTFRDLSKPMGAQSKERKLKFTQRFKDIEKIE GDMTVQCHYYTHYSSAIIVASYLVRMPPFTQAFCSLQGGSFDVADRMFHSVKNTWESASKENMS DVRELTPEFFYLPEFLTNCNAVEFGRMQDGTTLGDVQLPPWADGDPRKFISLHRQALESDFVSS NLHHWIDLIFGYKQQGPAAVEAVNTFHPYFYGDRIDLSSITDPLIKSTILGFVSNFGQVPKQIF TKPHPSRNTTGKSPVPGKETSTPTGLPGHSQSFLHSLPALRPSQVTVKDMYLFSLGSESPKGAI GHIVPTEKSILAVEKNKLLMPPLWNRVFSWGFDDFTCCLGSYGSDKILMTFENLAAWGPCLCAV CPSPTMIITSGASAVVCVWELSLVKGRPKGLKLRQALYGHTQAVTCLTASVTFSLLVSGSQDCT CMLWDLDHLSRVACLPVHREGISAVAISDVSGTIVSCAGAHLSLWDVNGQPLASITTAWGPEGA ITCCCIVERPAWDASHVIITGSKDGMVRIWKTEDMKMSVPRQAVMEEPSTEPLSPRGHKWAKNL ALSRELDVSVALSGKPSKASPAVTALAVTRNQAKLLVGDEKGRIFCWSADG hide sequence

Ensembl Acc Id:

ENSRNOP00000042082 ⟸ ENSRNOT00000043811

RefSeq Acc Id:	XP_038951002 ⟸ XM_039095074
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6GFA1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038951005 ⟸ XM_039095077
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I6GFA1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038951003 ⟸ XM_039095075
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6GFA1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038951007 ⟸ XM_039095079
- Peptide Label:	isoform X6

Ensembl Acc Id:

ENSRNOP00000081102 ⟸ ENSRNOT00000100506

Ensembl Acc Id:

ENSRNOP00000086747 ⟸ ENSRNOT00000118604

RefSeq Acc Id:	NP_001414587 ⟸ NM_001427658
- UniProtKB:	D4A748 (UniProtKB/TrEMBL)

Protein Domains

BEACH BEACH-type PH

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13699950

Promoter ID:

EPDNEW_R10471

Type:

single initiation site

Name:

Wdfy4_1

Description:

WDFY family member 4

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	16	9,430,735 - 9,430,795	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1564142	AgrOrtholog
BioCyc Gene	G2FUF-12096	BioCyc
Ensembl Genes	ENSRNOG00000029662	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000043811.6	UniProtKB/TrEMBL
	ENSRNOT00000100506.1	UniProtKB/TrEMBL
	ENSRNOT00000118604.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.1540.10	UniProtKB/TrEMBL
	1.25.10.10	UniProtKB/TrEMBL
	2.130.10.10	UniProtKB/TrEMBL
	2.30.29.30	UniProtKB/TrEMBL
InterPro	ARM-like	UniProtKB/TrEMBL
	ARM-type_fold	UniProtKB/TrEMBL
	BEACH_dom	UniProtKB/TrEMBL
	BEACH_dom_sf	UniProtKB/TrEMBL
	BEACH_domain_protein	UniProtKB/TrEMBL
	PH-BEACH_dom	UniProtKB/TrEMBL
	PH-like_dom_sf	UniProtKB/TrEMBL
	WD40/YVTN_repeat-like_dom	UniProtKB/TrEMBL
	WD40_repeat	UniProtKB/TrEMBL
	WD40_repeat_CS	UniProtKB/TrEMBL
	WD40_repeat_dom_sf	UniProtKB/TrEMBL
KEGG Report	rno:498582	UniProtKB/TrEMBL
NCBI Gene	498582	ENTREZGENE
PANTHER	BLUE CHEESE	UniProtKB/TrEMBL
	WD REPEAT- AND FYVE DOMAIN-CONTAINING PROTEIN 4	UniProtKB/TrEMBL
Pfam	Beach	UniProtKB/TrEMBL
	PH_BEACH	UniProtKB/TrEMBL
	WD40	UniProtKB/TrEMBL
PhenoGen	Wdfy4	PhenoGen
PROSITE	BEACH	UniProtKB/TrEMBL
	PH_BEACH	UniProtKB/TrEMBL
	WD_REPEATS_1	UniProtKB/TrEMBL
	WD_REPEATS_2	UniProtKB/TrEMBL
	WD_REPEATS_REGION	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000029662	RatGTEx
SMART	Beach	UniProtKB/TrEMBL
	WD40	UniProtKB/TrEMBL
Superfamily-SCOP	ARM-type_fold	UniProtKB/TrEMBL
	Beige_BEACH	UniProtKB/TrEMBL
	PH domain-like	UniProtKB/TrEMBL
	WD40_like	UniProtKB/TrEMBL
UniProt	A0A8I5ZUC7_RAT	UniProtKB/TrEMBL
	A0A8I6GFA1	ENTREZGENE, UniProtKB/TrEMBL
	D4A748	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2013-11-25	Wdfy4	WDFY family member 4	RGD1564142	similar to chromosome 10 open reading frame 64	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	RGD1564142	similar to chromosome 10 open reading frame 64	RGD1564142_predicted	similar to chromosome 10 open reading frame 64 (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-07	RGD1564142_predicted	similar to chromosome 10 open reading frame 64 (predicted)	LOC498582	similar to chromosome 10 open reading frame 64	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC498582	similar to chromosome 10 open reading frame 64			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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