Advanced Search (OLGA)

Gene: Pla2g4e (phospholipase A2, group IVE) Rattus norvegicus

Analyze

Symbol:

Pla2g4e

Name:

phospholipase A2, group IVE

RGD ID:

1310595

Description:

Predicted to enable several functions, including calcium-dependent phospholipase A2 activity; phosphatidylinositol-3,4-bisphosphate binding activity; and phospholipid binding activity. Predicted to be involved in N-acylphosphatidylethanolamine metabolic process; glycerophospholipid catabolic process; and positive regulation of endocytic recycling. Predicted to be located in early endosome membrane; lysosomal membrane; and plasma membrane. Predicted to be active in cytosol. Orthologous to human PLA2G4E (phospholipase A2 group IVE); PARTICIPATES IN alpha-linolenic acid metabolic pathway; arachidonic acid metabolic pathway; ether lipid metabolic pathway; INTERACTS WITH acrylamide; bisphenol A; 1,2-dimethylhydrazine (ortholog).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

cytosolic phospholipase A2 epsilon; LOC296091; phospholipase A2, group 4E; RGD1310595; similar to phospholipase A2, group IVB (cytosolic)

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	PLA2G4E (phospholipase A2 group IVE)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Pla2g4e (phospholipase A2, group IVE)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Pla2g4e (phospholipase A2 group IVE)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	PLA2G4E (phospholipase A2 group IVE)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	PLA2G4E (phospholipase A2 group IVE)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Pla2g4e (phospholipase A2 group IVE)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	PLA2G4E (phospholipase A2 group IVE)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	PLA2G4E (phospholipase A2 group IVE)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Pla2g4e (phospholipase A2 group IVE)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Mus musculus (house mouse):	Pla2g4e (phospholipase A2, group IVE)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	PLA2G4E (phospholipase A2 group IVE)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	pla2g4f.1 (phospholipase A2, group IVF, tandem duplicate 1)	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	pla2g4f.2 (phospholipase A2, group IVF, tandem duplicate 2)	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	jmjd7-pla2g4b	Alliance	DIOPT (OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	127,586,318 - 127,652,369 (-)	NCBI		GRCr8
mRatBN7.2	3	107,132,540 - 107,198,609 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	107,132,541 - 107,198,233 (-)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	3	111,952,396 - 112,018,470 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	111,952,348 - 111,994,337 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	118,500,163 - 118,566,233 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	106,670,159 - 106,735,089 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	106,567,403 - 106,631,517 (-)	NCBI
Celera	3	106,041,283 - 106,107,262 (-)	NCBI		Celera
Cytogenetic Map	3	q35	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Bloom syndrome (ISO)

colorectal cancer (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

2-hydroxypropanoic acid (ISO)

4,4'-sulfonyldiphenol (ISO)

acrylamide (EXP)

aflatoxin B1 (ISO)

arsane (ISO)

arsenic atom (ISO)

atrazine (ISO)

benzene (ISO)

benzo[a]pyrene (ISO)

Benzo[k]fluoranthene (ISO)

bis(2-chloroethyl) sulfide (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

cantharidin (ISO)

dimethylselenide (ISO)

hydroxyl (ISO)

ivermectin (ISO)

ozone (ISO)

paracetamol (ISO)

paraquat (ISO)

perfluorooctane-1-sulfonic acid (ISO)

perfluorooctanoic acid (ISO)

pirinixic acid (ISO)

rac-lactic acid (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

thiram (ISO)

Triptolide (ISO)

triptonide (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

glycerophospholipid catabolic process (IBA)

N-acylphosphatidylethanolamine metabolic process (ISO)

positive regulation of endocytic recycling (ISO)

Cellular Component

cytoplasm (ISO)

cytosol (IBA)

early endosome membrane (ISO)

lysosomal membrane (ISO)

plasma membrane (ISO)

Molecular Function

calcium ion binding (IBA)

calcium-dependent phospholipase A2 activity (IBA)

calcium-dependent phospholipid binding (IBA)

calcium-independent phospholipase A2 activity (IEA)

N-acyltransferase activity (ISO)

phosphatidylinositol-3,4,5-trisphosphate binding (ISO)

phosphatidylinositol-3,4-bisphosphate binding (ISO)

phosphatidylinositol-3,5-bisphosphate binding (ISO)

phosphatidylinositol-3-phosphate binding (ISO)

phosphatidylinositol-4,5-bisphosphate binding (ISO)

phosphatidylinositol-4-phosphate binding (ISO)

phosphatidylinositol-5-phosphate binding (ISO)

phospholipase A2 activity (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

alpha-linolenic acid metabolic pathway (IEA)

arachidonic acid metabolic pathway (IEA)

ether lipid metabolic pathway (IEA)

Fc epsilon receptor mediated signaling pathway (IEA)

glutamate signaling pathway (IEA)

glycerophospholipid metabolic pathway (IEA)

gonadotropin-releasing hormone signaling pathway (IEA)

linoleic acid metabolic pathway (IEA)

long term depression (IEA)

mitogen activated protein kinase signaling pathway (IEA)

toxoplasmosis pathway (IEA)

vascular endothelial growth factor signaling pathway (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
3.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
4.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:15866882	PMID:24413173	PMID:29447909

Genomics

Comparative Map Data

Pla2g4e
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	127,586,318 - 127,652,369 (-)	NCBI		GRCr8
mRatBN7.2	3	107,132,540 - 107,198,609 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	107,132,541 - 107,198,233 (-)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	3	111,952,396 - 112,018,470 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	111,952,348 - 111,994,337 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	118,500,163 - 118,566,233 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	106,670,159 - 106,735,089 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	106,567,403 - 106,631,517 (-)	NCBI
Celera	3	106,041,283 - 106,107,262 (-)	NCBI		Celera
Cytogenetic Map	3	q35	NCBI

PLA2G4E
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	15	41,981,582 - 42,050,703 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	15	41,981,394 - 42,051,190 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	15	42,273,780 - 42,342,901 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	15	40,063,244 - 40,089,737 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	15	19,043,598 - 19,070,102 (-)	NCBI		Celera
Cytogenetic Map	15	q15.1	NCBI
HuRef	15	19,121,756 - 19,190,910 (-)	NCBI		HuRef
CHM1_1	15	42,392,249 - 42,461,343 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	15	39,787,553 - 39,856,691 (-)	NCBI		T2T-CHM13v2.0

Pla2g4e
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	119,996,893 - 120,075,816 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	119,996,893 - 120,075,816 (-)	Ensembl		GRCm39 Ensembl
GRCm38	2	120,166,412 - 120,245,630 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	120,166,412 - 120,245,335 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	119,992,148 - 120,071,071 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	119,857,853 - 119,936,776 (-)	NCBI		MGSCv36	mm8
Celera	2	121,326,986 - 121,399,932 (-)	NCBI		Celera
Cytogenetic Map	2	E5	NCBI
cM Map	2	60.24	NCBI

Pla2g4e
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955416	8,765,561 - 8,804,616 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955416	8,765,620 - 8,826,184 (-)	NCBI	ChiLan1.0	ChiLan1.0

PLA2G4E
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	16	31,227,604 - 31,264,889 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	15	35,376,429 - 35,416,124 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	15	20,937,573 - 20,975,388 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	15	39,095,777 - 39,165,161 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	15	39,095,777 - 39,165,161 (-)	Ensembl	panpan1.1		panPan2

PLA2G4E
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	30	9,018,238 - 9,077,258 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	30	9,020,079 - 9,075,999 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	30	9,076,973 - 9,135,690 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	30	9,153,388 - 9,212,395 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	30	9,155,138 - 9,212,408 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	30	9,074,123 - 9,132,817 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	30	9,178,334 - 9,237,062 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	30	9,313,127 - 9,372,095 (-)	NCBI		UU_Cfam_GSD_1.0

Pla2g4e
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	87,452,829 - 87,488,718 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936471	5,302,688 - 5,370,182 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936471	5,300,932 - 5,370,150 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PLA2G4E
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	129,289,732 - 129,364,021 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	129,288,727 - 129,364,034 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	144,339,794 - 144,349,251 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PLA2G4E
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	26	40,938,730 - 41,001,787 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	26	40,939,712 - 41,001,217 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666048	100,001,209 - 100,063,250 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Pla2g4e
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624804	9,140,353 - 9,227,102 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624804	9,142,525 - 9,227,049 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Pla2g4e
330 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	47
Count of miRNA genes:	44
Interacting mature miRNAs:	47
Transcripts:	ENSRNOT00000030502
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2312673	Scl63	Serum cholesterol level QTL 63		0.001	blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	3	98535255	168026850	Rat
2301414	Kidm37	Kidney mass QTL 37		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	3	70653097	121056321	Rat
1582238	Bw68	Body weight QTL 68	3.2	0.0064	body mass (VT:0001259)	body weight (CMO:0000012)	3	53184593	115665732	Rat
2302373	Gluco39	Glucose level QTL 39	5.01		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	3	98535386	161695835	Rat
1582239	Epfw1	Epididymal fat weight QTL 1	4.5	0.0006	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	3	53184593	115665732	Rat
70216	Cm14	Cardiac mass QTL 14	2.1		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	3	31172320	163586636	Rat
2292591	Esta4	Estrogen-induced thymic atrophy QTL 4			thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	3	47233211	147415807	Rat
1358362	Srcrt2	Stress Responsive Cort QTL 2	2.78		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	3	38192233	133483320	Rat
1582216	Bw65	Body weight QTL 65	6.3		body mass (VT:0001259)	body weight (CMO:0000012)	3	102200529	115665732	Rat
737818	Hcar12	Hepatocarcinoma resistance QTL 12	2.6		liver integrity trait (VT:0010547)	volume of individual liver tumorous lesion (CMO:0001078)	3	29463235	118376539	Rat
1582218	Bw74	Body weight QTL 74	3.9	0.0021	body mass (VT:0001259)	body weight (CMO:0000012)	3	53184593	115665732	Rat
1582219	Bw63	Body weight QTL 63	3.8	0.001	body mass (VT:0001259)	body weight (CMO:0000012)	3	96127817	115665732	Rat
1582221	Kidm30	Kidney mass QTL 30	3.5	0.0008	kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	3	64655305	115665732	Rat
1581568	Rf53	Renal function QTL 53			urine total protein amount (VT:0000032)	urine protein excretion rate to body weight ratio (CMO:0001099)	3	56395968	161299569	Rat
1582210	Bw71	Body weight QTL 71	3.3	0.0012	body mass (VT:0001259)	body weight (CMO:0000012)	3	64655305	115665732	Rat
7387306	Bw124	Body weight QTL 124	3.2	0.0003	body mass (VT:0001259)	body weight (CMO:0000012)	3	84091273	129091273	Rat
1300111	Rf12	Renal function QTL 12	3.78		renal blood flow trait (VT:2000006)	absolute change in renal blood flow rate (CMO:0001168)	3	61017749	121056321	Rat
724523	Tsu1	Thymus enlargement suppressive QTL 1	3.84		thymus mass (VT:0004954)	thymus weight to body weight ratio (CMO:0000612)	3	50437504	115638231	Rat
1600376	Arunc5	Aerobic running capacity QTL 5		0.21	exercise endurance trait (VT:0002332)	maximum distance run on treadmill (CMO:0001406)	3	73376539	118376539	Rat
8694437	Bw167	Body weight QTL 167	22.46	0.001	retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	3	91797474	136797474	Rat
2302273	Gluco35	Glucose level QTL 35	5.3	0.001	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	3	80800231	114297550	Rat
8662816	Vetf4	Vascular elastic tissue fragility QTL 4	4		renal artery integrity trait (VT:0010642)	number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)	3	59242096	157323038	Rat
1559282	Emca5	Estrogen-induced mammary cancer QTL 5	3.9		mammary gland integrity trait (VT:0010552)	percentage of study population developing mammary tumors during a period of time (CMO:0000948)	3	43827364	169034231	Rat
1581503	Cm58	Cardiac mass QTL 58	2.7	0.05	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	3	43827364	121056321	Rat
2292613	Ept16	Estrogen-induced pituitary tumorigenesis QTL 16	8.3		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	3	47233430	110362260	Rat
1354611	Despr2	Despair related QTL 2	3.03	0.0028	locomotor behavior trait (VT:0001392)	amount of time spent in voluntary immobility (CMO:0001043)	3	97084464	142084464	Rat
631649	Bp123	Blood pressure QTL 123	3.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	89772419	134772419	Rat
631841	Niddm39	Non-insulin dependent diabetes mellitus QTL 39	3.36		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	3	94856903	159898684	Rat
12879848	Bw181	Body weght QTL 181		0.015	body mass (VT:0001259)	body weight (CMO:0000012)	3	70348525	121056321	Rat
2301971	Cm71	Cardiac mass QTL 71	4.63		heart left ventricle mass (VT:0007031)	heart left ventricle weight (CMO:0000776)	3	41874578	155617519	Rat
2312659	Slep7	Serum leptin concentration QTL 7		0.001	blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	3	98535255	168026850	Rat
1358885	Bp251	Blood pressure QTL 251	3.8		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	14489145	121056321	Rat
2301970	Bw81	Body weight QTL 81	5.19		body mass (VT:0001259)	body weight (CMO:0000012)	3	41874578	155617519	Rat
1581546	Pur13	Proteinuria QTL 13	2.93	0.0335	urine total protein amount (VT:0000032)	urine protein excretion rate (CMO:0000759)	3	78196190	146592722	Rat
631665	Bw8	Body weight QTL 8	5.5		body mass (VT:0001259)	body weight (CMO:0000012)	3	50437042	119183768	Rat
1358888	Bp264	Blood pressure QTL 264	4.43		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	14489145	121056321	Rat
2293087	Iddm27	Insulin dependent diabetes mellitus QTL 27	2.68		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	3	97551417	147415807	Rat
2312670	Bw94	Body weight QTL 94		0.01	inguinal fat pad mass (VT:0010424)	inguinal fat pad weight to body weight ratio (CMO:0001253)	3	98535255	168026850	Rat
1358186	Ept2	Estrogen-induced pituitary tumorigenesis QTL 2	8.3		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	3	47233430	110362260	Rat
724532	Cm17	Cardiac mass QTL 17	2		heart mass (VT:0007028)	calculated heart weight (CMO:0000073)	3	95735366	140735366	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
4	11	28	100	35	47	16	13	16	6	99	51	93	20	56	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001430038	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001430039	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_001080884	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592199	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592200	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592201	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592202	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592203	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592204	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017602588	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017602589	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017602590	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017602591	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017602592	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017602593	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039106511	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039106513	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039106514	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039106516	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_230487	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473949	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	EF011108	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000030502 ⟹ ENSRNOP00000031380

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	107,132,541 - 107,198,233 (-)	Ensembl
Rnor_6.0 Ensembl	3	111,952,348 - 111,994,337 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000097961 ⟹ ENSRNOP00000093379

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	107,133,250 - 107,174,484 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000109239 ⟹ ENSRNOP00000095683

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	107,133,250 - 107,174,484 (-)	Ensembl

RefSeq Acc Id:

XM_017592199 ⟹ XP_017447688

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	127,586,318 - 127,628,282 (-)	NCBI
mRatBN7.2	3	107,132,540 - 107,174,693 (-)	NCBI
Rnor_6.0	3	111,952,396 - 111,994,375 (-)	NCBI

Sequence:

show sequence

CTTGTCTCATTCCAGAACCTTCCTGGGCAGTCAGTTCAGAAGCGGGCACACAGGAGGGCAAGTG
ACTTCTTATACATGTGTCCATTGGGTCCCCGCCATGAGAGGCTGTAGGCTCCACATAGGTCAGA
ACTGCCAGGAAAGGTATAGAGAGAGAAGCTCCTGCCACGACTCCCGTTGTTTCTATTCAACTGC
TTTAACCCGATTGGAATAAGTCGAGACTCTGCTCTTGAGGTCTCACCCATAGTTCCAAAATATA
TCCATCCTATCTATGGGCCAGAAAAGCCGGTTGTTGAGCCTCAGGCAAGAGCCCAGACAGGAAA
CTCCCAGTGTGGATTCAGGCAAGCCAGAGCTGGAGAGCCGCCACGATGCTTCAGAGGCAGATGC
CTGCTTGGGTTTCCCACTCCCTGTCAGACACATGCCAAGCAGAAGATGGCAGGTGCTCGGAGCG
GAGAGACACGGAAATGAAAGAGCAGCAGCATGTCTCACTCTAGAGATGTCTACAATAGGAGAGG
AGACTAGCCAAAACAAACAATGTCAGAAGAGCATGTGGGCTGCTGCACGGCAGGAGGGGTCGTC
TCCATGCCATCTATTGACAGTGAGGATCATTAGCATGAAAAATGTTCGGCAGGCTGATATATTG
AGTCAGACAGATTGCTTTGTGACCCTCTGGCTGCCTACTGCCTCTCAGAAGAAGCTGAGGACCA
GAACCATCTCCAACTGCCCACACCCAGAGTGGAATGAAAGCTTCACCTTTCAGATCCAGACTCG
AGTAAAGAATGTTCTAGAGTTCAGCATCTGTGATGAAGATACGCTGACACAAAGTGACCATCTC
TTGACAGTCCTCTATGACCTCTCCAAGCTCTGCCTTCGGAATAAAACCCACGTGAAGTTCCCAC
TCAACCCAGAGGGCATGGAAGAACTGGAAGTGGAGTTCCTGCTCGAAGAAAATGTCTCCTCATC
AGAGACCCTCATCACCAATGGCGTGCTGGTGTCTCGCCAAGTCTCTTGCCTGGAAGTTCATGCA
GAATCCAGGAGGCCAAGGAAGAGGAAGAAAAACAAAAACCTTCTGGTGATGGTGACAGACTCCT
TCGAGAACACCCAGTGTGTCCAGCCCTGTCTGGAGCCCTGCTGCCCCAATCCTGCCTGCTTCCA
CTACCCCAAATACTCCCAGCCCCAGCTTTATGCAGAGGCACCTAAGAGCCACTGGAGCTATAGG
CTTTGCTGCTGTGAAGCACAAAGGAATGACACAGTCTGCCAGCCCCTCGATTGCCTTTCTGATG
GCCAGCCGATGACCCTGCCTTTGGGAGAGAACTATGAGTTACACATGAAGTCCTCACCCTGCTC
TAACACACTGGATGTGCGGCTCGGGTTCAGCCTGTGCCAGGAAGAGGTGGAGTTTCTGCAGAAG
CGGAAGGTGGCGGTGACCAAGGCACTGAATCAAGTGCTGCAACTGGAGGAGGGCCTGCATGAGC
ATGAGGTACCGATGATAGCCATCATGGCCACAGGAGGTGGCACGAGGTCTATGGTCTCCTTGTA
TGGCCACTTGCTGGGGCTGCAGAAGCTGAACCTTCTGGACTGTTCTGTTTACCTCACCGGCTTG
TCAGGTGCAACCTGGACAATGGCTACCTTGTACAGTGATCCTGAGTGGTCATCCAAAGACCTGG
AGCCTGTAGTCTTTGAGGCCCGGAGACATGTTGTCAAAGACAAGATGCCTGCATTGTACCCAGA
TCAGCTCTGCAAATGGCAAGAGGAACTCCGACAACACAGCCAGGAGGGCTACAAGACCACGTTC
ACAGACTTTTGGGGCAAGCTGGTGGAGTACAGTCTGGGAGATAAGAAAAATGAATGCAAGCTGT
CAGAACAGCGAGCTGCTCTGTGCCGGGGACAGAACCCTCTGCCCATCTACCTCACTATCAATGT
CAAGGATGATGTAAGCAACCAGGATTTCAGAGAATGGTTCGAGTTCTCCCCCTACGAAGTGGGC
ATGCAGAAGTACGGAGCCTTCATCCCCACGGAGCTATTTGGCTCTGAGTTCTTCATGGGGCGGC
TGATGAAGAGGATTCCTGAGCCAGAGATGTGCTACATGCTAGGGTTGTGGAGTAGCATCTTTTC
CCTGAACCTGCTTGATGCTTGGAATCTGTCCCACACCTCGGAGGAGTTTTTCTATAGGTGGACC
AGGGAGAAACTGCATGACATCGAAGATGATCCCCTCCTGCCTGAAATCCCCAGATGTGATGCTA
ACCCCTTGGAGACCACAGTAGTGATCCCAGCCACATGGCTGTCCAACACCTTCCGAGAAATCCT
CACACACAGGCCCTTGGTGTCTGAGTTCCACAACTTCCTGTACGGGTTGCAGCTGCACACCGAC
TACTTACAGAACAAACAGTTCTGTATGTGGAAAGACACAGTACTGGACACTTTCCCAAACCAGC
TGACACAGTTTACAAAACACCTGAACCTGCTGGACACTGCATTCTTTGTCAACTCCAGCTATGC
GCCCCTCCTTAGGCCAGAGAGAAAAGTCGACCTTATCATCCATCTCAATTACTGCGCAGGATCC
CAGACAAAGCCCCTGAAACAAACCTGCGAGTACTGCACGGAGCAGAATATCCCCTTCCCCAACT
ACTCCATCCAGGAGGACGACAAAAGTCTCAAGGAGTGCTATGTGATGGAGAATCCCCAGGAGCC
TGATGCGCCCATCGTGGTCTACTTCCCACTCATCAATGACACCTTCCAGAAGTACAAGGCTCCA
GGTGTAGAGCGAAGTCCTGAGGAGCTAGAACTGGGCCAGCTGAACATCTATGGACCAAAGTCTC
CCTATGCCACCAAGGAGCTGACGTACACAGAGGCCGCCTTCGACAAGCTGGTGAAGCTCTCAGA
GTATAACATCCTCAATAACAAAGACAAGCTCATTCAGGCCGTGAGACTAGCAATGGAGAAGAAA
CGCATGAAGAGCCAGTGTCCCTCCTAGGCCCGAGGGAGTCCTATCCATCTTGTGTCTGCTTCTA
TTGTCAGAAGCATCACCCCTCAAACCAGACCTCACACAGCTGGCTGGCCCTGCTCTCTGGCTGG
GGGGTGCAGCAGCTTGGCCTGGGCTTTCTAGTAAAATGTTACAAATGAACAAAGGAGAGAGAGA
GAAAAGAAGAGTCTATTGGGTTTTATACCCCTGGAGTTTCTCTCCACTTTCTGACAAGGAAGGT
ACCATGGCCACAGACTCCCACACCGTCTCAAGTATAGAATGTGACTATGTGTGCACAGAGAGTG
GCTAGTTCCCAAGAGACCTCACTCACCCTTCCAGCTGGAGGCAAAGCTCCCCTAAGCCTCCCCT
TCCCTCCTCTCCTTTTCTTCCTCCCATGGCCAGCCTAGAGAAATGTTCAGGAAGACCAAAAACT
GCTTTAAGTTTCTCTAGAAAATGCTTTGTAAATTTAAGGTAATTCATTGCATCCGCGGAATTTT
TGTTGTCGATAATATTTTGTGATTTATTTTTATTTTTTACTACGATGAAGAGAATATTAGGGGA
AAGCCTGACCTCTGACACAGCAAAGCCAAACAGGTGACTAACCCATGTCACTAGTGCCTCTTCA
GCTACCAGAGCCCTGGGCTAGAGATCATGTGAGCTTGACTAGGACTAGGTCTAAGCCTCAGCTC
CAGTGAAACCAGGCACTGTGGACAACGCAGCAGAAGCTCACAGAGTGAGGATCCAGGATGCCAT
CCAGGGAGGCCTGGGCAGGCTGTGGGCAAGCAGCACTGGGTACACGACACTTCCCAGTGCCATT
AATGATCGCTGGCGTCTCTCTGGCTTGCAGATGGGGTTATTTATTTATAAGTATGATTCCTCTT
ATTTATCACAGAAACACTATGACCTGTTTATCTAAGCCCTTATACAGTGACTCAGACAATAAGG
TTAGGAAGGATGACCTCAGAATGGTGAGTTTGGATTCTGACAAAGACCTCAGCTTTGGAGGAGA
ATCTGTGGGGAAGCCCTGGTCACCCAGACACCCAGACTCCAGGCTTCACTAAAGGATAGAAGGG
GGCCCCTGCAGTGAGCAGGGAGAAGCAGAAGGGCAGTTAGGGATGCGGCCTTTGTGGAGCCCAA
CAAGCCTGGAGGACATGATCCCTCCACAGTTCTGGTTGTTGAAAGATGAGTGGTACCCAACAGT
TTGTTTCAAATGGGCTCCTGCTTCCATCGTTGCTACTTGAAGTATGATTGGGGCTGACTGTGAA
CTCAGACCCAGCCACACTGGCAGGAACCCATACTGTAAAAAGACCAGTGTCCTTCTCTCTTCTC
CAGACTTACCTGTCAGTCACATCTGGTGAGGGGATTTGACTCCTATGTGGATAACATTGGGGAA
GAATGGATTTATTACTGTCTTCTACCAGCTTGGGGAGCATGAGTCCACAGACCCCTTTGAGCCG
TTACTAAGCTGGGCTTCTGAGCCTGCAAAACTGACCCCTGCCCAGGTGCTGCTGTTGTGAGCAG
GACGTCCAGAACTTCCTCTAGCCCTCCAAGTAGCTGGCTGCTTTTGCTTCCCTCATGCAGGGAA
CAGGCTCTGAATTATCAGAGAAAGCCAGAACATTTTTGCAAGGCGAAGGCAGCCATGCCTTGGA
CTCACCATAGCATACAAAGTTTATAAGAGCACTGTACCATTTGAGCACAGAATAAAGTGGTTAT
GAAGGCGAA

hide sequence

RefSeq Acc Id:

XM_017592201 ⟹ XP_017447690

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	127,586,318 - 127,628,049 (-)	NCBI
mRatBN7.2	3	107,132,540 - 107,174,261 (-)	NCBI
Rnor_6.0	3	111,952,396 - 111,994,135 (-)	NCBI

Sequence:

show sequence

AATGATGAGGAAACTTTCAGAATGGATAGAGTGGCTGGGCTGTGTGTGGAGGCAGGCCATATGG
CTGGCTTCTGTAGCCAGTAGAGGACCAAATACTAATACTGTCTTGGAGTGGCACATCTGCCCTC
AGCAGACCTTACTGAGAAGGATGGAGGGATAGAAGATATGGGGTAGAGGAGTCTCCCTTGCTTT
GAGGATGGGGTAGTACTGTGGTCAGGTTGCCACAGCACCTCCTGATCCACCTTCTGTTGTCCTG
GGCTCTGTGTTCTCACTTCCCAGTCTTTTGCCCTTTGATAAACGATTCCTCTATCACTTCCCAT
GGCTCCACTGCTTCAACACCAATCGACCTTTCCTTCTAAAAGTTCAACTCTGAACATACTGCCC
TGCTCAGAAACCACTGATGGTTCCCTATTGCCTAGAGAATAAGTCTTAAAACACGGCCTTTGAG
AGGCCACTCTAAGGCCGAGGTTTATAGAATGCTGTCACACAGTGAAGAACCGGCTTGGGGGAGC
GTGCAAGGAGGTCACAGGCCCTACTCTGTCTTTCCAGCTGGAGAGCCGCCACGATGCTTCAGAG
GCAGATGCCTGCTTGGGTTTCCCACTCCCTGTCAGACACATGCCAAGCAGAAGATGGCAGGTGC
TCGGAGGAGGGGTCGTCTCCATGCCATCTATTGACAGTGAGGATCATTAGCATGAAAAATGTTC
GGCAGGCTGATATATTGAGTCAGACAGATTGCTTTGTGACCCTCTGGCTGCCTACTGCCTCTCA
GAAGAAGCTGAGGACCAGAACCATCTCCAACTGCCCACACCCAGAGTGGAATGAAAGCTTCACC
TTTCAGATCCAGACTCGAGTAAAGAATGTTCTAGAGTTCAGCATCTGTGATGAAGATACGCTGA
CACAAAGTGACCATCTCTTGACAGTCCTCTATGACCTCTCCAAGCTCTGCCTTCGGAATAAAAC
CCACGTGAAGTTCCCACTCAACCCAGAGGGCATGGAAGAACTGGAAGTGGAGTTCCTGCTCGAA
GAAAATGTCTCCTCATCAGAGACCCTCATCACCAATGGCGTGCTGGTGTCTCGCCAAGTCTCTT
GCCTGGAAGTTCATGCAGAATCCAGGAGGCCAAGGAAGAGGAAGAAAAACAAAAACCTTCTGGT
GATGGTGACAGACTCCTTCGAGAACACCCAGTGTGTCCAGCCCTGTCTGGAGCCCTGCTGCCCC
AATCCTGCCTGCTTCCACTACCCCAAATACTCCCAGCCCCAGCTTTATGCAGAGGCACCTAAGA
GCCACTGGAGCTATAGGCTTTGCTGCTGTGAAGCACAAAGGAATGACACAGTCTGCCAGCCCCT
CGATTGCCTTTCTGATGGCCAGCCGATGACCCTGCCTTTGGGAGAGAACTATGAGTTACACATG
AAGTCCTCACCCTGCTCTAACACACTGGATGTGCGGCTCGGGTTCAGCCTGTGCCAGGAAGAGG
TGGAGTTTCTGCAGAAGCGGAAGGTGGCGGTGACCAAGGCACTGAATCAAGTGCTGCAACTGGA
GGAGGGCCTGCATGAGCATGAGGTACCGATGATAGCCATCATGGCCACAGGAGGTGGCACGAGG
TCTATGGTCTCCTTGTATGGCCACTTGCTGGGGCTGCAGAAGCTGAACCTTCTGGACTGTTCTG
TTTACCTCACCGGCTTGTCAGGTGCAACCTGGACAATGGCTACCTTGTACAGTGATCCTGAGTG
GTCATCCAAAGACCTGGAGCCTGTAGTCTTTGAGGCCCGGAGACATGTTGTCAAAGACAAGATG
CCTGCATTGTACCCAGATCAGCTCTGCAAATGGCAAGAGGAACTCCGACAACACAGCCAGGAGG
GCTACAAGACCACGTTCACAGACTTTTGGGGCAAGCTGGTGGAGTACAGTCTGGGAGATAAGAA
AAATGAATGCAAGCTGTCAGAACAGCGAGCTGCTCTGTGCCGGGGACAGAACCCTCTGCCCATC
TACCTCACTATCAATGTCAAGGATGATGTAAGCAACCAGGATTTCAGAGAATGGTTCGAGTTCT
CCCCCTACGAAGTGGGCATGCAGAAGTACGGAGCCTTCATCCCCACGGAGCTATTTGGCTCTGA
GTTCTTCATGGGGCGGCTGATGAAGAGGATTCCTGAGCCAGAGATGTGCTACATGCTAGGGTTG
TGGAGTAGCATCTTTTCCCTGAACCTGCTTGATGCTTGGAATCTGTCCCACACCTCGGAGGAGT
TTTTCTATAGGTGGACCAGGGAGAAACTGCATGACATCGAAGATGATCCCCTCCTGCCTGAAAT
CCCCAGATGTGATGCTAACCCCTTGGAGACCACAGTAGTGATCCCAGCCACATGGCTGTCCAAC
ACCTTCCGAGAAATCCTCACACACAGGCCCTTGGTGTCTGAGTTCCACAACTTCCTGTACGGGT
TGCAGCTGCACACCGACTACTTACAGAACAAACAGTTCTGTATGTGGAAAGACACAGTACTGGA
CACTTTCCCAAACCAGCTGACACAGTTTACAAAACACCTGAACCTGCTGGACACTGCATTCTTT
GTCAACTCCAGCTATGCGCCCCTCCTTAGGCCAGAGAGAAAAGTCGACCTTATCATCCATCTCA
ATTACTGCGCAGGATCCCAGACAAAGCCCCTGAAACAAACCTGCGAGTACTGCACGGAGCAGAA
TATCCCCTTCCCCAACTACTCCATCCAGGAGGACGACAAAAGTCTCAAGGAGTGCTATGTGATG
GAGAATCCCCAGGAGCCTGATGCGCCCATCGTGGTCTACTTCCCACTCATCAATGACACCTTCC
AGAAGTACAAGGCTCCAGGTGTAGAGCGAAGTCCTGAGGAGCTAGAACTGGGCCAGCTGAACAT
CTATGGACCAAAGTCTCCCTATGCCACCAAGGAGCTGACGTACACAGAGGCCGCCTTCGACAAG
CTGGTGAAGCTCTCAGAGTATAACATCCTCAATAACAAAGACAAGCTCATTCAGGCCGTGAGAC
TAGCAATGGAGAAGAAACGCATGAAGAGCCAGTGTCCCTCCTAGGCCCGAGGGAGTCCTATCCA
TCTTGTGTCTGCTTCTATTGTCAGAAGCATCACCCCTCAAACCAGACCTCACACAGCTGGCTGG
CCCTGCTCTCTGGCTGGGGGGTGCAGCAGCTTGGCCTGGGCTTTCTAGTAAAATGTTACAAATG
AACAAAGGAGAGAGAGAGAAAAGAAGAGTCTATTGGGTTTTATACCCCTGGAGTTTCTCTCCAC
TTTCTGACAAGGAAGGTACCATGGCCACAGACTCCCACACCGTCTCAAGTATAGAATGTGACTA
TGTGTGCACAGAGAGTGGCTAGTTCCCAAGAGACCTCACTCACCCTTCCAGCTGGAGGCAAAGC
TCCCCTAAGCCTCCCCTTCCCTCCTCTCCTTTTCTTCCTCCCATGGCCAGCCTAGAGAAATGTT
CAGGAAGACCAAAAACTGCTTTAAGTTTCTCTAGAAAATGCTTTGTAAATTTAAGGTAATTCAT
TGCATCCGCGGAATTTTTGTTGTCGATAATATTTTGTGATTTATTTTTATTTTTTACTACGATG
AAGAGAATATTAGGGGAAAGCCTGACCTCTGACACAGCAAAGCCAAACAGGTGACTAACCCATG
TCACTAGTGCCTCTTCAGCTACCAGAGCCCTGGGCTAGAGATCATGTGAGCTTGACTAGGACTA
GGTCTAAGCCTCAGCTCCAGTGAAACCAGGCACTGTGGACAACGCAGCAGAAGCTCACAGAGTG
AGGATCCAGGATGCCATCCAGGGAGGCCTGGGCAGGCTGTGGGCAAGCAGCACTGGGTACACGA
CACTTCCCAGTGCCATTAATGATCGCTGGCGTCTCTCTGGCTTGCAGATGGGGTTATTTATTTA
TAAGTATGATTCCTCTTATTTATCACAGAAACACTATGACCTGTTTATCTAAGCCCTTATACAG
TGACTCAGACAATAAGGTTAGGAAGGATGACCTCAGAATGGTGAGTTTGGATTCTGACAAAGAC
CTCAGCTTTGGAGGAGAATCTGTGGGGAAGCCCTGGTCACCCAGACACCCAGACTCCAGGCTTC
ACTAAAGGATAGAAGGGGGCCCCTGCAGTGAGCAGGGAGAAGCAGAAGGGCAGTTAGGGATGCG
GCCTTTGTGGAGCCCAACAAGCCTGGAGGACATGATCCCTCCACAGTTCTGGTTGTTGAAAGAT
GAGTGGTACCCAACAGTTTGTTTCAAATGGGCTCCTGCTTCCATCGTTGCTACTTGAAGTATGA
TTGGGGCTGACTGTGAACTCAGACCCAGCCACACTGGCAGGAACCCATACTGTAAAAAGACCAG
TGTCCTTCTCTCTTCTCCAGACTTACCTGTCAGTCACATCTGGTGAGGGGATTTGACTCCTATG
TGGATAACATTGGGGAAGAATGGATTTATTACTGTCTTCTACCAGCTTGGGGAGCATGAGTCCA
CAGACCCCTTTGAGCCGTTACTAAGCTGGGCTTCTGAGCCTGCAAAACTGACCCCTGCCCAGGT
GCTGCTGTTGTGAGCAGGACGTCCAGAACTTCCTCTAGCCCTCCAAGTAGCTGGCTGCTTTTGC
TTCCCTCATGCAGGGAACAGGCTCTGAATTATCAGAGAAAGCCAGAACATTTTTGCAAGGCGAA
GGCAGCCATGCCTTGGACTCACCATAGCATACAAAGTTTATAAGAGCACTGTACCATTTGAGCA
CAGAATAAAGTGGTTATGAAGGCGAA

hide sequence

RefSeq Acc Id:

XM_017592202 ⟹ XP_017447691

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	127,586,318 - 127,628,282 (-)	NCBI
mRatBN7.2	3	107,132,540 - 107,174,693 (-)	NCBI
Rnor_6.0	3	111,952,396 - 111,994,373 (-)	NCBI

Sequence:

show sequence

TGTCTCATTCCAGAACCTTCCTGGGCAGTCAGTTCAGAAGCGGGCACACAGGAGGGCAAGTGAC
TTCTTATACATGTGTCCATTGGGTCCCCGCCATGAGAGGCTGTAGGCTCCACATAGGTCAGAAC
TGCCAGGAAAGGTATAGAGAGAGAAGCTCCTGCCACGACTCCCGTTGTTTCTATTCAACTGCTT
TAACCCGATTGGAATAAGTCGAGACTCTGCTCTTGAGCTGGAGAGCCGCCACGATGCTTCAGAG
GCAGATGCCTGCTTGGGTTTCCCACTCCCTGTCAGACACATGCCAAGCAGAAGATGGCAGGTGC
TCGGAGGAGGGGTCGTCTCCATGCCATCTATTGACAGTGAGGATCATTAGCATGAAAAATGTTC
GGCAGGCTGATATATTGAGTCAGACAGATTGCTTTGTGACCCTCTGGCTGCCTACTGCCTCTCA
GAAGAAGCTGAGGACCAGAACCATCTCCAACTGCCCACACCCAGAGTGGAATGAAAGCTTCACC
TTTCAGATCCAGACTCGAGTAAAGAATGTTCTAGAGTTCAGCATCTGTGATGAAGATACGCTGA
CACAAAGTGACCATCTCTTGACAGTCCTCTATGACCTCTCCAAGCTCTGCCTTCGGAATAAAAC
CCACGTGAAGTTCCCACTCAACCCAGAGGGCATGGAAGAACTGGAAGTGGAGTTCCTGCTCGAA
GAAAATGTCTCCTCATCAGAGACCCTCATCACCAATGGCGTGCTGGTGTCTCGCCAAGTCTCTT
GCCTGGAAGTTCATGCAGAATCCAGGAGGCCAAGGAAGAGGAAGAAAAACAAAAACCTTCTGGT
GATGGTGACAGACTCCTTCGAGAACACCCAGTGTGTCCAGCCCTGTCTGGAGCCCTGCTGCCCC
AATCCTGCCTGCTTCCACTACCCCAAATACTCCCAGCCCCAGCTTTATGCAGAGGCACCTAAGA
GCCACTGGAGCTATAGGCTTTGCTGCTGTGAAGCACAAAGGAATGACACAGTCTGCCAGCCCCT
CGATTGCCTTTCTGATGGCCAGCCGATGACCCTGCCTTTGGGAGAGAACTATGAGTTACACATG
AAGTCCTCACCCTGCTCTAACACACTGGATGTGCGGCTCGGGTTCAGCCTGTGCCAGGAAGAGG
TGGAGTTTCTGCAGAAGCGGAAGGTGGCGGTGACCAAGGCACTGAATCAAGTGCTGCAACTGGA
GGAGGGCCTGCATGAGCATGAGGTACCGATGATAGCCATCATGGCCACAGGAGGTGGCACGAGG
TCTATGGTCTCCTTGTATGGCCACTTGCTGGGGCTGCAGAAGCTGAACCTTCTGGACTGTTCTG
TTTACCTCACCGGCTTGTCAGGTGCAACCTGGACAATGGCTACCTTGTACAGTGATCCTGAGTG
GTCATCCAAAGACCTGGAGCCTGTAGTCTTTGAGGCCCGGAGACATGTTGTCAAAGACAAGATG
CCTGCATTGTACCCAGATCAGCTCTGCAAATGGCAAGAGGAACTCCGACAACACAGCCAGGAGG
GCTACAAGACCACGTTCACAGACTTTTGGGGCAAGCTGGTGGAGTACAGTCTGGGAGATAAGAA
AAATGAATGCAAGCTGTCAGAACAGCGAGCTGCTCTGTGCCGGGGACAGAACCCTCTGCCCATC
TACCTCACTATCAATGTCAAGGATGATGTAAGCAACCAGGATTTCAGAGAATGGTTCGAGTTCT
CCCCCTACGAAGTGGGCATGCAGAAGTACGGAGCCTTCATCCCCACGGAGCTATTTGGCTCTGA
GTTCTTCATGGGGCGGCTGATGAAGAGGATTCCTGAGCCAGAGATGTGCTACATGCTAGGGTTG
TGGAGTAGCATCTTTTCCCTGAACCTGCTTGATGCTTGGAATCTGTCCCACACCTCGGAGGAGT
TTTTCTATAGGTGGACCAGGGAGAAACTGCATGACATCGAAGATGATCCCCTCCTGCCTGAAAT
CCCCAGATGTGATGCTAACCCCTTGGAGACCACAGTAGTGATCCCAGCCACATGGCTGTCCAAC
ACCTTCCGAGAAATCCTCACACACAGGCCCTTGGTGTCTGAGTTCCACAACTTCCTGTACGGGT
TGCAGCTGCACACCGACTACTTACAGAACAAACAGTTCTGTATGTGGAAAGACACAGTACTGGA
CACTTTCCCAAACCAGCTGACACAGTTTACAAAACACCTGAACCTGCTGGACACTGCATTCTTT
GTCAACTCCAGCTATGCGCCCCTCCTTAGGCCAGAGAGAAAAGTCGACCTTATCATCCATCTCA
ATTACTGCGCAGGATCCCAGACAAAGCCCCTGAAACAAACCTGCGAGTACTGCACGGAGCAGAA
TATCCCCTTCCCCAACTACTCCATCCAGGAGGACGACAAAAGTCTCAAGGAGTGCTATGTGATG
GAGAATCCCCAGGAGCCTGATGCGCCCATCGTGGTCTACTTCCCACTCATCAATGACACCTTCC
AGAAGTACAAGGCTCCAGGTGTAGAGCGAAGTCCTGAGGAGCTAGAACTGGGCCAGCTGAACAT
CTATGGACCAAAGTCTCCCTATGCCACCAAGGAGCTGACGTACACAGAGGCCGCCTTCGACAAG
CTGGTGAAGCTCTCAGAGTATAACATCCTCAATAACAAAGACAAGCTCATTCAGGCCGTGAGAC
TAGCAATGGAGAAGAAACGCATGAAGAGCCAGTGTCCCTCCTAGGCCCGAGGGAGTCCTATCCA
TCTTGTGTCTGCTTCTATTGTCAGAAGCATCACCCCTCAAACCAGACCTCACACAGCTGGCTGG
CCCTGCTCTCTGGCTGGGGGGTGCAGCAGCTTGGCCTGGGCTTTCTAGTAAAATGTTACAAATG
AACAAAGGAGAGAGAGAGAAAAGAAGAGTCTATTGGGTTTTATACCCCTGGAGTTTCTCTCCAC
TTTCTGACAAGGAAGGTACCATGGCCACAGACTCCCACACCGTCTCAAGTATAGAATGTGACTA
TGTGTGCACAGAGAGTGGCTAGTTCCCAAGAGACCTCACTCACCCTTCCAGCTGGAGGCAAAGC
TCCCCTAAGCCTCCCCTTCCCTCCTCTCCTTTTCTTCCTCCCATGGCCAGCCTAGAGAAATGTT
CAGGAAGACCAAAAACTGCTTTAAGTTTCTCTAGAAAATGCTTTGTAAATTTAAGGTAATTCAT
TGCATCCGCGGAATTTTTGTTGTCGATAATATTTTGTGATTTATTTTTATTTTTTACTACGATG
AAGAGAATATTAGGGGAAAGCCTGACCTCTGACACAGCAAAGCCAAACAGGTGACTAACCCATG
TCACTAGTGCCTCTTCAGCTACCAGAGCCCTGGGCTAGAGATCATGTGAGCTTGACTAGGACTA
GGTCTAAGCCTCAGCTCCAGTGAAACCAGGCACTGTGGACAACGCAGCAGAAGCTCACAGAGTG
AGGATCCAGGATGCCATCCAGGGAGGCCTGGGCAGGCTGTGGGCAAGCAGCACTGGGTACACGA
CACTTCCCAGTGCCATTAATGATCGCTGGCGTCTCTCTGGCTTGCAGATGGGGTTATTTATTTA
TAAGTATGATTCCTCTTATTTATCACAGAAACACTATGACCTGTTTATCTAAGCCCTTATACAG
TGACTCAGACAATAAGGTTAGGAAGGATGACCTCAGAATGGTGAGTTTGGATTCTGACAAAGAC
CTCAGCTTTGGAGGAGAATCTGTGGGGAAGCCCTGGTCACCCAGACACCCAGACTCCAGGCTTC
ACTAAAGGATAGAAGGGGGCCCCTGCAGTGAGCAGGGAGAAGCAGAAGGGCAGTTAGGGATGCG
GCCTTTGTGGAGCCCAACAAGCCTGGAGGACATGATCCCTCCACAGTTCTGGTTGTTGAAAGAT
GAGTGGTACCCAACAGTTTGTTTCAAATGGGCTCCTGCTTCCATCGTTGCTACTTGAAGTATGA
TTGGGGCTGACTGTGAACTCAGACCCAGCCACACTGGCAGGAACCCATACTGTAAAAAGACCAG
TGTCCTTCTCTCTTCTCCAGACTTACCTGTCAGTCACATCTGGTGAGGGGATTTGACTCCTATG
TGGATAACATTGGGGAAGAATGGATTTATTACTGTCTTCTACCAGCTTGGGGAGCATGAGTCCA
CAGACCCCTTTGAGCCGTTACTAAGCTGGGCTTCTGAGCCTGCAAAACTGACCCCTGCCCAGGT
GCTGCTGTTGTGAGCAGGACGTCCAGAACTTCCTCTAGCCCTCCAAGTAGCTGGCTGCTTTTGC
TTCCCTCATGCAGGGAACAGGCTCTGAATTATCAGAGAAAGCCAGAACATTTTTGCAAGGCGAA
GGCAGCCATGCCTTGGACTCACCATAGCATACAAAGTTTATAAGAGCACTGTACCATTTGAGCA
CAGAATAAAGTGGTTATGAAGGCGAA

hide sequence

RefSeq Acc Id:

XM_017592203 ⟹ XP_017447692

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	127,586,318 - 127,626,879 (-)	NCBI
mRatBN7.2	3	107,132,540 - 107,173,105 (-)	NCBI
Rnor_6.0	3	111,952,396 - 111,992,925 (-)	NCBI

Sequence:

show sequence

ATGGGCCAGAAAAGCCGGTTGTTGAGCCTCAGGCAAGAGCCCAGACAGGAAACTCCCAGTGTGG
ATTCAGGCAAGCCAGAGCTGGAGAGCCGCCACGATGCTTCAGAGGCAGATGCCTGCTTGGGTTT
CCCACTCCCTGTCAGACACATGCCAAGCAGAAGATGGCAGGTGCTCGGAGGAGGGGTCGTCTCC
ATGCCATCTATTGACAGTGAGGATCATTAGCATGAAAAATGTTCGGCAGGCTGATATATTGAGT
CAGACAGATTGCTTTGTGACCCTCTGGCTGCCTACTGCCTCTCAGAAGAAGCTGAGGACCAGAA
CCATCTCCAACTGCCCACACCCAGAGTGGAATGAAAGCTTCACCTTTCAGATCCAGACTCGAGT
AAAGAATGTTCTAGAGTTCAGCATCTGTGATGAAGATACGCTGACACAAAGTGACCATCTCTTG
ACAGTCCTCTATGACCTCTCCAAGCTCTGCCTTCGGAATAAAACCCACGTGAAGTTCCCACTCA
ACCCAGAGGGCATGGAAGAACTGGAAGTGGAGTTCCTGCTCGAAGAAAATGTCTCCTCATCAGA
GACCCTCATCACCAATGGCGTGCTGGTGTCTCGCCAAGTCTCTTGCCTGGAAGTTCATGCAGAA
TCCAGGAGGCCAAGGAAGAGGAAGAAAAACAAAAACCTTCTGGTGATGGTGACAGACTCCTTCG
AGAACACCCAGTGTGTCCAGCCCTGTCTGGAGCCCTGCTGCCCCAATCCTGCCTGCTTCCACTA
CCCCAAATACTCCCAGCCCCAGCTTTATGCAGAGGCACCTAAGAGCCACTGGAGCTATAGGCTT
TGCTGCTGTGAAGCACAAAGGAATGACACAGTCTGCCAGCCCCTCGATTGCCTTTCTGATGGCC
AGCCGATGACCCTGCCTTTGGGAGAGAACTATGAGTTACACATGAAGTCCTCACCCTGCTCTAA
CACACTGGATGTGCGGCTCGGGTTCAGCCTGTGCCAGGAAGAGGTGGAGTTTCTGCAGAAGCGG
AAGGTGGCGGTGACCAAGGCACTGAATCAAGTGCTGCAACTGGAGGAGGGCCTGCATGAGCATG
AGGTACCGATGATAGCCATCATGGCCACAGGAGGTGGCACGAGGTCTATGGTCTCCTTGTATGG
CCACTTGCTGGGGCTGCAGAAGCTGAACCTTCTGGACTGTTCTGTTTACCTCACCGGCTTGTCA
GGTGCAACCTGGACAATGGCTACCTTGTACAGTGATCCTGAGTGGTCATCCAAAGACCTGGAGC
CTGTAGTCTTTGAGGCCCGGAGACATGTTGTCAAAGACAAGATGCCTGCATTGTACCCAGATCA
GCTCTGCAAATGGCAAGAGGAACTCCGACAACACAGCCAGGAGGGCTACAAGACCACGTTCACA
GACTTTTGGGGCAAGCTGGTGGAGTACAGTCTGGGAGATAAGAAAAATGAATGCAAGCTGTCAG
AACAGCGAGCTGCTCTGTGCCGGGGACAGAACCCTCTGCCCATCTACCTCACTATCAATGTCAA
GGATGATGTAAGCAACCAGGATTTCAGAGAATGGTTCGAGTTCTCCCCCTACGAAGTGGGCATG
CAGAAGTACGGAGCCTTCATCCCCACGGAGCTATTTGGCTCTGAGTTCTTCATGGGGCGGCTGA
TGAAGAGGATTCCTGAGCCAGAGATGTGCTACATGCTAGGGTTGTGGAGTAGCATCTTTTCCCT
GAACCTGCTTGATGCTTGGAATCTGTCCCACACCTCGGAGGAGTTTTTCTATAGGTGGACCAGG
GAGAAACTGCATGACATCGAAGATGATCCCCTCCTGCCTGAAATCCCCAGATGTGATGCTAACC
CCTTGGAGACCACAGTAGTGATCCCAGCCACATGGCTGTCCAACACCTTCCGAGAAATCCTCAC
ACACAGGCCCTTGGTGTCTGAGTTCCACAACTTCCTGTACGGGTTGCAGCTGCACACCGACTAC
TTACAGAACAAACAGTTCTGTATGTGGAAAGACACAGTACTGGACACTTTCCCAAACCAGCTGA
CACAGTTTACAAAACACCTGAACCTGCTGGACACTGCATTCTTTGTCAACTCCAGCTATGCGCC
CCTCCTTAGGCCAGAGAGAAAAGTCGACCTTATCATCCATCTCAATTACTGCGCAGGATCCCAG
ACAAAGCCCCTGAAACAAACCTGCGAGTACTGCACGGAGCAGAATATCCCCTTCCCCAACTACT
CCATCCAGGAGGACGACAAAAGTCTCAAGGAGTGCTATGTGATGGAGAATCCCCAGGAGCCTGA
TGCGCCCATCGTGGTCTACTTCCCACTCATCAATGACACCTTCCAGAAGTACAAGGCTCCAGGT
GTAGAGCGAAGTCCTGAGGAGCTAGAACTGGGCCAGCTGAACATCTATGGACCAAAGTCTCCCT
ATGCCACCAAGGAGCTGACGTACACAGAGGCCGCCTTCGACAAGCTGGTGAAGCTCTCAGAGTA
TAACATCCTCAATAACAAAGACAAGCTCATTCAGGCCGTGAGACTAGCAATGGAGAAGAAACGC
ATGAAGAGCCAGTGTCCCTCCTAGGCCCGAGGGAGTCCTATCCATCTTGTGTCTGCTTCTATTG
TCAGAAGCATCACCCCTCAAACCAGACCTCACACAGCTGGCTGGCCCTGCTCTCTGGCTGGGGG
GTGCAGCAGCTTGGCCTGGGCTTTCTAGTAAAATGTTACAAATGAACAAAGGAGAGAGAGAGAA
AAGAAGAGTCTATTGGGTTTTATACCCCTGGAGTTTCTCTCCACTTTCTGACAAGGAAGGTACC
ATGGCCACAGACTCCCACACCGTCTCAAGTATAGAATGTGACTATGTGTGCACAGAGAGTGGCT
AGTTCCCAAGAGACCTCACTCACCCTTCCAGCTGGAGGCAAAGCTCCCCTAAGCCTCCCCTTCC
CTCCTCTCCTTTTCTTCCTCCCATGGCCAGCCTAGAGAAATGTTCAGGAAGACCAAAAACTGCT
TTAAGTTTCTCTAGAAAATGCTTTGTAAATTTAAGGTAATTCATTGCATCCGCGGAATTTTTGT
TGTCGATAATATTTTGTGATTTATTTTTATTTTTTACTACGATGAAGAGAATATTAGGGGAAAG
CCTGACCTCTGACACAGCAAAGCCAAACAGGTGACTAACCCATGTCACTAGTGCCTCTTCAGCT
ACCAGAGCCCTGGGCTAGAGATCATGTGAGCTTGACTAGGACTAGGTCTAAGCCTCAGCTCCAG
TGAAACCAGGCACTGTGGACAACGCAGCAGAAGCTCACAGAGTGAGGATCCAGGATGCCATCCA
GGGAGGCCTGGGCAGGCTGTGGGCAAGCAGCACTGGGTACACGACACTTCCCAGTGCCATTAAT
GATCGCTGGCGTCTCTCTGGCTTGCAGATGGGGTTATTTATTTATAAGTATGATTCCTCTTATT
TATCACAGAAACACTATGACCTGTTTATCTAAGCCCTTATACAGTGACTCAGACAATAAGGTTA
GGAAGGATGACCTCAGAATGGTGAGTTTGGATTCTGACAAAGACCTCAGCTTTGGAGGAGAATC
TGTGGGGAAGCCCTGGTCACCCAGACACCCAGACTCCAGGCTTCACTAAAGGATAGAAGGGGGC
CCCTGCAGTGAGCAGGGAGAAGCAGAAGGGCAGTTAGGGATGCGGCCTTTGTGGAGCCCAACAA
GCCTGGAGGACATGATCCCTCCACAGTTCTGGTTGTTGAAAGATGAGTGGTACCCAACAGTTTG
TTTCAAATGGGCTCCTGCTTCCATCGTTGCTACTTGAAGTATGATTGGGGCTGACTGTGAACTC
AGACCCAGCCACACTGGCAGGAACCCATACTGTAAAAAGACCAGTGTCCTTCTCTCTTCTCCAG
ACTTACCTGTCAGTCACATCTGGTGAGGGGATTTGACTCCTATGTGGATAACATTGGGGAAGAA
TGGATTTATTACTGTCTTCTACCAGCTTGGGGAGCATGAGTCCACAGACCCCTTTGAGCCGTTA
CTAAGCTGGGCTTCTGAGCCTGCAAAACTGACCCCTGCCCAGGTGCTGCTGTTGTGAGCAGGAC
GTCCAGAACTTCCTCTAGCCCTCCAAGTAGCTGGCTGCTTTTGCTTCCCTCATGCAGGGAACAG
GCTCTGAATTATCAGAGAAAGCCAGAACATTTTTGCAAGGCGAAGGCAGCCATGCCTTGGACTC
ACCATAGCATACAAAGTTTATAAGAGCACTGTACCATTTGAGCACAGAATAAAGTGGTTATGAA
GGCGAA

hide sequence

RefSeq Acc Id:

XM_017592204 ⟹ XP_017447693

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	127,586,318 - 127,628,282 (-)	NCBI
mRatBN7.2	3	107,132,540 - 107,174,694 (-)	NCBI
Rnor_6.0	3	111,952,396 - 111,994,373 (-)	NCBI

Sequence:

show sequence

TGTCTCATTCCAGAACCTTCCTGGGCAGTCAGTTCAGAAGCGGGCACACAGGAGGGCAAGTGAC
TTCTTATACATGTGTCCATTGGGTCCCCGCCATGAGAGGCTGTAGGCTCCACATAGGTCAGAAC
TGCCAGGAAAGGTATAGAGAGAGAAGCTCCTGCCACGACTCCCGTTGTTTCTATTCAACTGCTT
TAACCCGATTGGAATAAGTCGAGACTCTGCTCTTGAGGAGGGGTCGTCTCCATGCCATCTATTG
ACAGTGAGGATCATTAGCATGAAAAATGTTCGGCAGGCTGATATATTGAGTCAGACAGATTGCT
TTGTGACCCTCTGGCTGCCTACTGCCTCTCAGAAGAAGCTGAGGACCAGAACCATCTCCAACTG
CCCACACCCAGAGTGGAATGAAAGCTTCACCTTTCAGATCCAGACTCGAGTAAAGAATGTTCTA
GAGTTCAGCATCTGTGATGAAGATACGCTGACACAAAGTGACCATCTCTTGACAGTCCTCTATG
ACCTCTCCAAGCTCTGCCTTCGGAATAAAACCCACGTGAAGTTCCCACTCAACCCAGAGGGCAT
GGAAGAACTGGAAGTGGAGTTCCTGCTCGAAGAAAATGTCTCCTCATCAGAGACCCTCATCACC
AATGGCGTGCTGGTGTCTCGCCAAGTCTCTTGCCTGGAAGTTCATGCAGAATCCAGGAGGCCAA
GGAAGAGGAAGAAAAACAAAAACCTTCTGGTGATGGTGACAGACTCCTTCGAGAACACCCAGTG
TGTCCAGCCCTGTCTGGAGCCCTGCTGCCCCAATCCTGCCTGCTTCCACTACCCCAAATACTCC
CAGCCCCAGCTTTATGCAGAGGCACCTAAGAGCCACTGGAGCTATAGGCTTTGCTGCTGTGAAG
CACAAAGGAATGACACAGTCTGCCAGCCCCTCGATTGCCTTTCTGATGGCCAGCCGATGACCCT
GCCTTTGGGAGAGAACTATGAGTTACACATGAAGTCCTCACCCTGCTCTAACACACTGGATGTG
CGGCTCGGGTTCAGCCTGTGCCAGGAAGAGGTGGAGTTTCTGCAGAAGCGGAAGGTGGCGGTGA
CCAAGGCACTGAATCAAGTGCTGCAACTGGAGGAGGGCCTGCATGAGCATGAGGTACCGATGAT
AGCCATCATGGCCACAGGAGGTGGCACGAGGTCTATGGTCTCCTTGTATGGCCACTTGCTGGGG
CTGCAGAAGCTGAACCTTCTGGACTGTTCTGTTTACCTCACCGGCTTGTCAGGTGCAACCTGGA
CAATGGCTACCTTGTACAGTGATCCTGAGTGGTCATCCAAAGACCTGGAGCCTGTAGTCTTTGA
GGCCCGGAGACATGTTGTCAAAGACAAGATGCCTGCATTGTACCCAGATCAGCTCTGCAAATGG
CAAGAGGAACTCCGACAACACAGCCAGGAGGGCTACAAGACCACGTTCACAGACTTTTGGGGCA
AGCTGGTGGAGTACAGTCTGGGAGATAAGAAAAATGAATGCAAGCTGTCAGAACAGCGAGCTGC
TCTGTGCCGGGGACAGAACCCTCTGCCCATCTACCTCACTATCAATGTCAAGGATGATGTAAGC
AACCAGGATTTCAGAGAATGGTTCGAGTTCTCCCCCTACGAAGTGGGCATGCAGAAGTACGGAG
CCTTCATCCCCACGGAGCTATTTGGCTCTGAGTTCTTCATGGGGCGGCTGATGAAGAGGATTCC
TGAGCCAGAGATGTGCTACATGCTAGGGTTGTGGAGTAGCATCTTTTCCCTGAACCTGCTTGAT
GCTTGGAATCTGTCCCACACCTCGGAGGAGTTTTTCTATAGGTGGACCAGGGAGAAACTGCATG
ACATCGAAGATGATCCCCTCCTGCCTGAAATCCCCAGATGTGATGCTAACCCCTTGGAGACCAC
AGTAGTGATCCCAGCCACATGGCTGTCCAACACCTTCCGAGAAATCCTCACACACAGGCCCTTG
GTGTCTGAGTTCCACAACTTCCTGTACGGGTTGCAGCTGCACACCGACTACTTACAGAACAAAC
AGTTCTGTATGTGGAAAGACACAGTACTGGACACTTTCCCAAACCAGCTGACACAGTTTACAAA
ACACCTGAACCTGCTGGACACTGCATTCTTTGTCAACTCCAGCTATGCGCCCCTCCTTAGGCCA
GAGAGAAAAGTCGACCTTATCATCCATCTCAATTACTGCGCAGGATCCCAGACAAAGCCCCTGA
AACAAACCTGCGAGTACTGCACGGAGCAGAATATCCCCTTCCCCAACTACTCCATCCAGGAGGA
CGACAAAAGTCTCAAGGAGTGCTATGTGATGGAGAATCCCCAGGAGCCTGATGCGCCCATCGTG
GTCTACTTCCCACTCATCAATGACACCTTCCAGAAGTACAAGGCTCCAGGTGTAGAGCGAAGTC
CTGAGGAGCTAGAACTGGGCCAGCTGAACATCTATGGACCAAAGTCTCCCTATGCCACCAAGGA
GCTGACGTACACAGAGGCCGCCTTCGACAAGCTGGTGAAGCTCTCAGAGTATAACATCCTCAAT
AACAAAGACAAGCTCATTCAGGCCGTGAGACTAGCAATGGAGAAGAAACGCATGAAGAGCCAGT
GTCCCTCCTAGGCCCGAGGGAGTCCTATCCATCTTGTGTCTGCTTCTATTGTCAGAAGCATCAC
CCCTCAAACCAGACCTCACACAGCTGGCTGGCCCTGCTCTCTGGCTGGGGGGTGCAGCAGCTTG
GCCTGGGCTTTCTAGTAAAATGTTACAAATGAACAAAGGAGAGAGAGAGAAAAGAAGAGTCTAT
TGGGTTTTATACCCCTGGAGTTTCTCTCCACTTTCTGACAAGGAAGGTACCATGGCCACAGACT
CCCACACCGTCTCAAGTATAGAATGTGACTATGTGTGCACAGAGAGTGGCTAGTTCCCAAGAGA
CCTCACTCACCCTTCCAGCTGGAGGCAAAGCTCCCCTAAGCCTCCCCTTCCCTCCTCTCCTTTT
CTTCCTCCCATGGCCAGCCTAGAGAAATGTTCAGGAAGACCAAAAACTGCTTTAAGTTTCTCTA
GAAAATGCTTTGTAAATTTAAGGTAATTCATTGCATCCGCGGAATTTTTGTTGTCGATAATATT
TTGTGATTTATTTTTATTTTTTACTACGATGAAGAGAATATTAGGGGAAAGCCTGACCTCTGAC
ACAGCAAAGCCAAACAGGTGACTAACCCATGTCACTAGTGCCTCTTCAGCTACCAGAGCCCTGG
GCTAGAGATCATGTGAGCTTGACTAGGACTAGGTCTAAGCCTCAGCTCCAGTGAAACCAGGCAC
TGTGGACAACGCAGCAGAAGCTCACAGAGTGAGGATCCAGGATGCCATCCAGGGAGGCCTGGGC
AGGCTGTGGGCAAGCAGCACTGGGTACACGACACTTCCCAGTGCCATTAATGATCGCTGGCGTC
TCTCTGGCTTGCAGATGGGGTTATTTATTTATAAGTATGATTCCTCTTATTTATCACAGAAACA
CTATGACCTGTTTATCTAAGCCCTTATACAGTGACTCAGACAATAAGGTTAGGAAGGATGACCT
CAGAATGGTGAGTTTGGATTCTGACAAAGACCTCAGCTTTGGAGGAGAATCTGTGGGGAAGCCC
TGGTCACCCAGACACCCAGACTCCAGGCTTCACTAAAGGATAGAAGGGGGCCCCTGCAGTGAGC
AGGGAGAAGCAGAAGGGCAGTTAGGGATGCGGCCTTTGTGGAGCCCAACAAGCCTGGAGGACAT
GATCCCTCCACAGTTCTGGTTGTTGAAAGATGAGTGGTACCCAACAGTTTGTTTCAAATGGGCT
CCTGCTTCCATCGTTGCTACTTGAAGTATGATTGGGGCTGACTGTGAACTCAGACCCAGCCACA
CTGGCAGGAACCCATACTGTAAAAAGACCAGTGTCCTTCTCTCTTCTCCAGACTTACCTGTCAG
TCACATCTGGTGAGGGGATTTGACTCCTATGTGGATAACATTGGGGAAGAATGGATTTATTACT
GTCTTCTACCAGCTTGGGGAGCATGAGTCCACAGACCCCTTTGAGCCGTTACTAAGCTGGGCTT
CTGAGCCTGCAAAACTGACCCCTGCCCAGGTGCTGCTGTTGTGAGCAGGACGTCCAGAACTTCC
TCTAGCCCTCCAAGTAGCTGGCTGCTTTTGCTTCCCTCATGCAGGGAACAGGCTCTGAATTATC
AGAGAAAGCCAGAACATTTTTGCAAGGCGAAGGCAGCCATGCCTTGGACTCACCATAGCATACA
AAGTTTATAAGAGCACTGTACCATTTGAGCACAGAATAAAGTGGTTATGAAGGCGAA

hide sequence

RefSeq Acc Id:

XM_039106511 ⟹ XP_038962439

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	127,586,318 - 127,628,282 (-)	NCBI
mRatBN7.2	3	107,132,540 - 107,174,693 (-)	NCBI

RefSeq Acc Id:

XM_039106513 ⟹ XP_038962441

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	127,588,574 - 127,628,284 (-)	NCBI
mRatBN7.2	3	107,134,801 - 107,174,711 (-)	NCBI

RefSeq Acc Id:

XM_039106514 ⟹ XP_038962442

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	127,591,690 - 127,628,287 (-)	NCBI
mRatBN7.2	3	107,137,912 - 107,174,714 (-)	NCBI

RefSeq Acc Id:

XM_039106516 ⟹ XP_038962444

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	127,599,689 - 127,628,284 (-)	NCBI
mRatBN7.2	3	107,146,034 - 107,174,708 (-)	NCBI

RefSeq Acc Id:

XM_230487 ⟹ XP_230487

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	127,586,318 - 127,652,369 (-)	NCBI
mRatBN7.2	3	107,132,540 - 107,198,609 (-)	NCBI
Rnor_6.0	3	111,952,396 - 112,018,470 (-)	NCBI
Rnor_5.0	3	118,500,163 - 118,566,233 (-)	NCBI
RGSC_v3.4	3	106,670,159 - 106,735,089 (-)	RGD

Sequence:

show sequence

GAGATGGCTCTGTTTCAGTGGTCAGGAGCGTCTGCGGCTCTTCCAGAGGACGTGGCTTGCTTTT
GTTTTTGTGATTTTAAACATAATACCATGGTGCATTCTCTTTAAACTTCATCATATCATTTATC
AAACTAGACGAAATGAGAGGCAGGGTTAATGACCAGTCTCCACCGTCAGCTCAGAGCCTAGAGG
TGGGTATTTGTTTTCATAGCTCAAAATAGAGATGCCGGGTGCGGAGCAACGACTGAGGAGCAAT
GGCTTTACGGACCGAGAATGTGAGTCTCGTTCAGAGCCTGCTAGCTTTAGTCATCTCGCCATCC
CCCCTCCCTTCTCTGGAATATATTGAGTTTCACGCTTAAAAATAGCTCTTACAATGCAGAACTG
GAGATAGCCCCGAGCCTGAATCGCAGCTCTGCAATGCCTGTCTTCCGGTCCCCCATCACCTAGT
GGTGTGGTGTGGGCGGTGCAGTCTTTGCTGCGCTGACCCTCTGCACAGCAGGGAACCTCTCTTT
TACTAGTGACCGCTGGGTTGCTCGAAATGTTTCCGGAGCTCCTCTAGCGAAGCTGTGATCTCTT
TCCCTCCCTCCTTAATAATTCATCTGACATTTCTCCAAGAGGAACCTGCTGGCACGTTTCCTTT
GTCACAAACCTCTCCTGAAATTCCGAGAGAATTGCCCCCAAGAGGACACCTTGCTTTTAAGAAT
CAACTCTAGCTCTACGCAGTCTATTCCACATTCCAATGACATGGACATGGCTGGTGTGACCCAC
GTCTCAGAAGGCCACCATGGCCTGGGGACCAGCATGTTTGTCCCACAGAACACCCAAGGGGAAG
AAGACAGCTGGCCAGGAAGAAATTGCAATGACTTTGAAGATGCACAGGACCCACAGACTGCTGT
GGCCCCGCCTTTACTTCCCATGGCTTCTGGCGGCTCTCAGGAGGGGTCGTCTCCATGCCATCTA
TTGACAGTGAGGATCATTAGCATGAAAAATGTTCGGCAGGCTGATATATTGAGTCAGACAGATT
GCTTTGTGACCCTCTGGCTGCCTACTGCCTCTCAGAAGAAGCTGAGGACCAGAACCATCTCCAA
CTGCCCACACCCAGAGTGGAATGAAAGCTTCACCTTTCAGATCCAGACTCGAGTAAAGAATGTT
CTAGAGTTCAGCATCTGTGATGAAGATACGCTGACACAAAGTGACCATCTCTTGACAGTCCTCT
ATGACCTCTCCAAGCTCTGCCTTCGGAATAAAACCCACGTGAAGTTCCCACTCAACCCAGAGGG
CATGGAAGAACTGGAAGTGGAGTTCCTGCTCGAAGAAAATGTCTCCTCATCAGAGACCCTCATC
ACCAATGGCGTGCTGGTGTCTCGCCAAGTCTCTTGCCTGGAAGTTCATGCAGAATCCAGGAGGC
CAAGGAAGAGGAAGAAAAACAAAAACCTTCTGGTGATGGTGACAGACTCCTTCGAGAACACCCA
GTGTGTCCAGCCCTGTCTGGAGCCCTGCTGCCCCAATCCTGCCTGCTTCCACTACCCCAAATAC
TCCCAGCCCCAGCTTTATGCAGAGGCACCTAAGAGCCACTGGAGCTATAGGCTTTGCTGCTGTG
AAGCACAAAGGAATGACACAGTCTGCCAGCCCCTCGATTGCCTTTCTGATGGCCAGCCGATGAC
CCTGCCTTTGGGAGAGAACTATGAGTTACACATGAAGTCCTCACCCTGCTCTAACACACTGGAT
GTGCGGCTCGGGTTCAGCCTGTGCCAGGAAGAGGTGGAGTTTCTGCAGAAGCGGAAGGTGGCGG
TGACCAAGGCACTGAATCAAGTGCTGCAACTGGAGGAGGGCCTGCATGAGCATGAGGTACCGAT
GATAGCCATCATGGCCACAGGAGGTGGCACGAGGTCTATGGTCTCCTTGTATGGCCACTTGCTG
GGGCTGCAGAAGCTGAACCTTCTGGACTGTTCTGTTTACCTCACCGGCTTGTCAGGTGCAACCT
GGACAATGGCTACCTTGTACAGTGATCCTGAGTGGTCATCCAAAGACCTGGAGCCTGTAGTCTT
TGAGGCCCGGAGACATGTTGTCAAAGACAAGATGCCTGCATTGTACCCAGATCAGCTCTGCAAA
TGGCAAGAGGAACTCCGACAACACAGCCAGGAGGGCTACAAGACCACGTTCACAGACTTTTGGG
GCAAGCTGGTGGAGTACAGTCTGGGAGATAAGAAAAATGAATGCAAGCTGTCAGAACAGCGAGC
TGCTCTGTGCCGGGGACAGAACCCTCTGCCCATCTACCTCACTATCAATGTCAAGGATGATGTA
AGCAACCAGGATTTCAGAGAATGGTTCGAGTTCTCCCCCTACGAAGTGGGCATGCAGAAGTACG
GAGCCTTCATCCCCACGGAGCTATTTGGCTCTGAGTTCTTCATGGGGCGGCTGATGAAGAGGAT
TCCTGAGCCAGAGATGTGCTACATGCTAGGGTTGTGGAGTAGCATCTTTTCCCTGAACCTGCTT
GATGCTTGGAATCTGTCCCACACCTCGGAGGAGTTTTTCTATAGGTGGACCAGGGAGAAACTGC
ATGACATCGAAGATGATCCCCTCCTGCCTGAAATCCCCAGATGTGATGCTAACCCCTTGGAGAC
CACAGTAGTGATCCCAGCCACATGGCTGTCCAACACCTTCCGAGAAATCCTCACACACAGGCCC
TTGGTGTCTGAGTTCCACAACTTCCTGTACGGGTTGCAGCTGCACACCGACTACTTACAGAACA
AACAGTTCTGTATGTGGAAAGACACAGTACTGGACACTTTCCCAAACCAGCTGACACAGTTTAC
AAAACACCTGAACCTGCTGGACACTGCATTCTTTGTCAACTCCAGCTATGCGCCCCTCCTTAGG
CCAGAGAGAAAAGTCGACCTTATCATCCATCTCAATTACTGCGCAGGATCCCAGACAAAGCCCC
TGAAACAAACCTGCGAGTACTGCACGGAGCAGAATATCCCCTTCCCCAACTACTCCATCCAGGA
GGACGACAAAAGTCTCAAGGAGTGCTATGTGATGGAGAATCCCCAGGAGCCTGATGCGCCCATC
GTGGTCTACTTCCCACTCATCAATGACACCTTCCAGAAGTACAAGGCTCCAGGTGTAGAGCGAA
GTCCTGAGGAGCTAGAACTGGGCCAGCTGAACATCTATGGACCAAAGTCTCCCTATGCCACCAA
GGAGCTGACGTACACAGAGGCCGCCTTCGACAAGCTGGTGAAGCTCTCAGAGTATAACATCCTC
AATAACAAAGACAAGCTCATTCAGGCCGTGAGACTAGCAATGGAGAAGAAACGCATGAAGAGCC
AGTGTCCCTCCTAGGCCCGAGGGAGTCCTATCCATCTTGTGTCTGCTTCTATTGTCAGAAGCAT
CACCCCTCAAACCAGACCTCACACAGCTGGCTGGCCCTGCTCTCTGGCTGGGGGGTGCAGCAGC
TTGGCCTGGGCTTTCTAGTAAAATGTTACAAATGAACAAAGGAGAGAGAGAGAAAAGAAGAGTC
TATTGGGTTTTATACCCCTGGAGTTTCTCTCCACTTTCTGACAAGGAAGGTACCATGGCCACAG
ACTCCCACACCGTCTCAAGTATAGAATGTGACTATGTGTGCACAGAGAGTGGCTAGTTCCCAAG
AGACCTCACTCACCCTTCCAGCTGGAGGCAAAGCTCCCCTAAGCCTCCCCTTCCCTCCTCTCCT
TTTCTTCCTCCCATGGCCAGCCTAGAGAAATGTTCAGGAAGACCAAAAACTGCTTTAAGTTTCT
CTAGAAAATGCTTTGTAAATTTAAGGTAATTCATTGCATCCGCGGAATTTTTGTTGTCGATAAT
ATTTTGTGATTTATTTTTATTTTTTACTACGATGAAGAGAATATTAGGGGAAAGCCTGACCTCT
GACACAGCAAAGCCAAACAGGTGACTAACCCATGTCACTAGTGCCTCTTCAGCTACCAGAGCCC
TGGGCTAGAGATCATGTGAGCTTGACTAGGACTAGGTCTAAGCCTCAGCTCCAGTGAAACCAGG
CACTGTGGACAACGCAGCAGAAGCTCACAGAGTGAGGATCCAGGATGCCATCCAGGGAGGCCTG
GGCAGGCTGTGGGCAAGCAGCACTGGGTACACGACACTTCCCAGTGCCATTAATGATCGCTGGC
GTCTCTCTGGCTTGCAGATGGGGTTATTTATTTATAAGTATGATTCCTCTTATTTATCACAGAA
ACACTATGACCTGTTTATCTAAGCCCTTATACAGTGACTCAGACAATAAGGTTAGGAAGGATGA
CCTCAGAATGGTGAGTTTGGATTCTGACAAAGACCTCAGCTTTGGAGGAGAATCTGTGGGGAAG
CCCTGGTCACCCAGACACCCAGACTCCAGGCTTCACTAAAGGATAGAAGGGGGCCCCTGCAGTG
AGCAGGGAGAAGCAGAAGGGCAGTTAGGGATGCGGCCTTTGTGGAGCCCAACAAGCCTGGAGGA
CATGATCCCTCCACAGTTCTGGTTGTTGAAAGATGAGTGGTACCCAACAGTTTGTTTCAAATGG
GCTCCTGCTTCCATCGTTGCTACTTGAAGTATGATTGGGGCTGACTGTGAACTCAGACCCAGCC
ACACTGGCAGGAACCCATACTGTAAAAAGACCAGTGTCCTTCTCTCTTCTCCAGACTTACCTGT
CAGTCACATCTGGTGAGGGGATTTGACTCCTATGTGGATAACATTGGGGAAGAATGGATTTATT
ACTGTCTTCTACCAGCTTGGGGAGCATGAGTCCACAGACCCCTTTGAGCCGTTACTAAGCTGGG
CTTCTGAGCCTGCAAAACTGACCCCTGCCCAGGTGCTGCTGTTGTGAGCAGGACGTCCAGAACT
TCCTCTAGCCCTCCAAGTAGCTGGCTGCTTTTGCTTCCCTCATGCAGGGAACAGGCTCTGAATT
ATCAGAGAAAGCCAGAACATTTTTGCAAGGCGAAGGCAGCCATGCCTTGGACTCACCATAGCAT
ACAAAGTTTATAAGAGCACTGTACCATTTGAGCACAGAATAAAGTGGTTATGAAGGCGAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001416967	(Get FASTA)	NCBI Sequence Viewer
	NP_001416968	(Get FASTA)	NCBI Sequence Viewer
	XP_017447688	(Get FASTA)	NCBI Sequence Viewer
	XP_017447690	(Get FASTA)	NCBI Sequence Viewer
	XP_017447691	(Get FASTA)	NCBI Sequence Viewer
	XP_017447692	(Get FASTA)	NCBI Sequence Viewer
	XP_017447693	(Get FASTA)	NCBI Sequence Viewer
	XP_038962439	(Get FASTA)	NCBI Sequence Viewer
	XP_038962441	(Get FASTA)	NCBI Sequence Viewer
	XP_038962442	(Get FASTA)	NCBI Sequence Viewer
	XP_038962444	(Get FASTA)	NCBI Sequence Viewer
	XP_230487	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	ABJ98877	(Get FASTA)	NCBI Sequence Viewer
	EDL79934	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000031380.6
	ENSRNOP00000093379.1
	ENSRNOP00000095683.1

RefSeq Acc Id:	XP_230487 ⟸ XM_230487
- Peptide Label:	isoform X2
- UniProtKB:	F1LPY6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDMAGVTHVSEGHHGLGTSMFVPQNTQGEEDSWPGRNCNDFEDAQDPQTAVAPPLLPMASGGSQ EGSSPCHLLTVRIISMKNVRQADILSQTDCFVTLWLPTASQKKLRTRTISNCPHPEWNESFTFQ IQTRVKNVLEFSICDEDTLTQSDHLLTVLYDLSKLCLRNKTHVKFPLNPEGMEELEVEFLLEEN VSSSETLITNGVLVSRQVSCLEVHAESRRPRKRKKNKNLLVMVTDSFENTQCVQPCLEPCCPNP ACFHYPKYSQPQLYAEAPKSHWSYRLCCCEAQRNDTVCQPLDCLSDGQPMTLPLGENYELHMKS SPCSNTLDVRLGFSLCQEEVEFLQKRKVAVTKALNQVLQLEEGLHEHEVPMIAIMATGGGTRSM VSLYGHLLGLQKLNLLDCSVYLTGLSGATWTMATLYSDPEWSSKDLEPVVFEARRHVVKDKMPA LYPDQLCKWQEELRQHSQEGYKTTFTDFWGKLVEYSLGDKKNECKLSEQRAALCRGQNPLPIYL TINVKDDVSNQDFREWFEFSPYEVGMQKYGAFIPTELFGSEFFMGRLMKRIPEPEMCYMLGLWS SIFSLNLLDAWNLSHTSEEFFYRWTREKLHDIEDDPLLPEIPRCDANPLETTVVIPATWLSNTF REILTHRPLVSEFHNFLYGLQLHTDYLQNKQFCMWKDTVLDTFPNQLTQFTKHLNLLDTAFFVN SSYAPLLRPERKVDLIIHLNYCAGSQTKPLKQTCEYCTEQNIPFPNYSIQEDDKSLKECYVMEN PQEPDAPIVVYFPLINDTFQKYKAPGVERSPEELELGQLNIYGPKSPYATKELTYTEAAFDKLV KLSEYNILNNKDKLIQAVRLAMEKKRMKSQCPS hide sequence

RefSeq Acc Id:	XP_017447688 ⟸ XM_017592199
- Peptide Label:	isoform X1
- UniProtKB:	F1LPY6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGQKSRLLSLRQEPRQETPSVDSGKPELESRHDASEADACLGFPLPVRHMPSRRWQVLGAERHG NERAAACLTLEMSTIGEETSQNKQCQKSMWAAARQEGSSPCHLLTVRIISMKNVRQADILSQTD CFVTLWLPTASQKKLRTRTISNCPHPEWNESFTFQIQTRVKNVLEFSICDEDTLTQSDHLLTVL YDLSKLCLRNKTHVKFPLNPEGMEELEVEFLLEENVSSSETLITNGVLVSRQVSCLEVHAESRR PRKRKKNKNLLVMVTDSFENTQCVQPCLEPCCPNPACFHYPKYSQPQLYAEAPKSHWSYRLCCC EAQRNDTVCQPLDCLSDGQPMTLPLGENYELHMKSSPCSNTLDVRLGFSLCQEEVEFLQKRKVA VTKALNQVLQLEEGLHEHEVPMIAIMATGGGTRSMVSLYGHLLGLQKLNLLDCSVYLTGLSGAT WTMATLYSDPEWSSKDLEPVVFEARRHVVKDKMPALYPDQLCKWQEELRQHSQEGYKTTFTDFW GKLVEYSLGDKKNECKLSEQRAALCRGQNPLPIYLTINVKDDVSNQDFREWFEFSPYEVGMQKY GAFIPTELFGSEFFMGRLMKRIPEPEMCYMLGLWSSIFSLNLLDAWNLSHTSEEFFYRWTREKL HDIEDDPLLPEIPRCDANPLETTVVIPATWLSNTFREILTHRPLVSEFHNFLYGLQLHTDYLQN KQFCMWKDTVLDTFPNQLTQFTKHLNLLDTAFFVNSSYAPLLRPERKVDLIIHLNYCAGSQTKP LKQTCEYCTEQNIPFPNYSIQEDDKSLKECYVMENPQEPDAPIVVYFPLINDTFQKYKAPGVER SPEELELGQLNIYGPKSPYATKELTYTEAAFDKLVKLSEYNILNNKDKLIQAVRLAMEKKRMKS QCPS hide sequence

RefSeq Acc Id:

XP_017447693 ⟸ XM_017592204

- Peptide Label:

isoform X5

- Sequence:

show sequence

MKNVRQADILSQTDCFVTLWLPTASQKKLRTRTISNCPHPEWNESFTFQIQTRVKNVLEFSICD
EDTLTQSDHLLTVLYDLSKLCLRNKTHVKFPLNPEGMEELEVEFLLEENVSSSETLITNGVLVS
RQVSCLEVHAESRRPRKRKKNKNLLVMVTDSFENTQCVQPCLEPCCPNPACFHYPKYSQPQLYA
EAPKSHWSYRLCCCEAQRNDTVCQPLDCLSDGQPMTLPLGENYELHMKSSPCSNTLDVRLGFSL
CQEEVEFLQKRKVAVTKALNQVLQLEEGLHEHEVPMIAIMATGGGTRSMVSLYGHLLGLQKLNL
LDCSVYLTGLSGATWTMATLYSDPEWSSKDLEPVVFEARRHVVKDKMPALYPDQLCKWQEELRQ
HSQEGYKTTFTDFWGKLVEYSLGDKKNECKLSEQRAALCRGQNPLPIYLTINVKDDVSNQDFRE
WFEFSPYEVGMQKYGAFIPTELFGSEFFMGRLMKRIPEPEMCYMLGLWSSIFSLNLLDAWNLSH
TSEEFFYRWTREKLHDIEDDPLLPEIPRCDANPLETTVVIPATWLSNTFREILTHRPLVSEFHN
FLYGLQLHTDYLQNKQFCMWKDTVLDTFPNQLTQFTKHLNLLDTAFFVNSSYAPLLRPERKVDL
IIHLNYCAGSQTKPLKQTCEYCTEQNIPFPNYSIQEDDKSLKECYVMENPQEPDAPIVVYFPLI
NDTFQKYKAPGVERSPEELELGQLNIYGPKSPYATKELTYTEAAFDKLVKLSEYNILNNKDKLI
QAVRLAMEKKRMKSQCPS

hide sequence

RefSeq Acc Id:

XP_017447691 ⟸ XM_017592202

- Peptide Label:

isoform X4

- Sequence:

show sequence

MLQRQMPAWVSHSLSDTCQAEDGRCSEEGSSPCHLLTVRIISMKNVRQADILSQTDCFVTLWLP
TASQKKLRTRTISNCPHPEWNESFTFQIQTRVKNVLEFSICDEDTLTQSDHLLTVLYDLSKLCL
RNKTHVKFPLNPEGMEELEVEFLLEENVSSSETLITNGVLVSRQVSCLEVHAESRRPRKRKKNK
NLLVMVTDSFENTQCVQPCLEPCCPNPACFHYPKYSQPQLYAEAPKSHWSYRLCCCEAQRNDTV
CQPLDCLSDGQPMTLPLGENYELHMKSSPCSNTLDVRLGFSLCQEEVEFLQKRKVAVTKALNQV
LQLEEGLHEHEVPMIAIMATGGGTRSMVSLYGHLLGLQKLNLLDCSVYLTGLSGATWTMATLYS
DPEWSSKDLEPVVFEARRHVVKDKMPALYPDQLCKWQEELRQHSQEGYKTTFTDFWGKLVEYSL
GDKKNECKLSEQRAALCRGQNPLPIYLTINVKDDVSNQDFREWFEFSPYEVGMQKYGAFIPTEL
FGSEFFMGRLMKRIPEPEMCYMLGLWSSIFSLNLLDAWNLSHTSEEFFYRWTREKLHDIEDDPL
LPEIPRCDANPLETTVVIPATWLSNTFREILTHRPLVSEFHNFLYGLQLHTDYLQNKQFCMWKD
TVLDTFPNQLTQFTKHLNLLDTAFFVNSSYAPLLRPERKVDLIIHLNYCAGSQTKPLKQTCEYC
TEQNIPFPNYSIQEDDKSLKECYVMENPQEPDAPIVVYFPLINDTFQKYKAPGVERSPEELELG
QLNIYGPKSPYATKELTYTEAAFDKLVKLSEYNILNNKDKLIQAVRLAMEKKRMKSQCPS

hide sequence

RefSeq Acc Id:	XP_017447690 ⟸ XM_017592201
- Peptide Label:	isoform X4
- UniProtKB:	F1LPY6 (UniProtKB/TrEMBL), A0A8I6ANS2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLQRQMPAWVSHSLSDTCQAEDGRCSEEGSSPCHLLTVRIISMKNVRQADILSQTDCFVTLWLP TASQKKLRTRTISNCPHPEWNESFTFQIQTRVKNVLEFSICDEDTLTQSDHLLTVLYDLSKLCL RNKTHVKFPLNPEGMEELEVEFLLEENVSSSETLITNGVLVSRQVSCLEVHAESRRPRKRKKNK NLLVMVTDSFENTQCVQPCLEPCCPNPACFHYPKYSQPQLYAEAPKSHWSYRLCCCEAQRNDTV CQPLDCLSDGQPMTLPLGENYELHMKSSPCSNTLDVRLGFSLCQEEVEFLQKRKVAVTKALNQV LQLEEGLHEHEVPMIAIMATGGGTRSMVSLYGHLLGLQKLNLLDCSVYLTGLSGATWTMATLYS DPEWSSKDLEPVVFEARRHVVKDKMPALYPDQLCKWQEELRQHSQEGYKTTFTDFWGKLVEYSL GDKKNECKLSEQRAALCRGQNPLPIYLTINVKDDVSNQDFREWFEFSPYEVGMQKYGAFIPTEL FGSEFFMGRLMKRIPEPEMCYMLGLWSSIFSLNLLDAWNLSHTSEEFFYRWTREKLHDIEDDPL LPEIPRCDANPLETTVVIPATWLSNTFREILTHRPLVSEFHNFLYGLQLHTDYLQNKQFCMWKD TVLDTFPNQLTQFTKHLNLLDTAFFVNSSYAPLLRPERKVDLIIHLNYCAGSQTKPLKQTCEYC TEQNIPFPNYSIQEDDKSLKECYVMENPQEPDAPIVVYFPLINDTFQKYKAPGVERSPEELELG QLNIYGPKSPYATKELTYTEAAFDKLVKLSEYNILNNKDKLIQAVRLAMEKKRMKSQCPS hide sequence

RefSeq Acc Id:	XP_017447692 ⟸ XM_017592203
- Peptide Label:	isoform X4
- UniProtKB:	F1LPY6 (UniProtKB/TrEMBL), A0A8I6ANS2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLQRQMPAWVSHSLSDTCQAEDGRCSEEGSSPCHLLTVRIISMKNVRQADILSQTDCFVTLWLP TASQKKLRTRTISNCPHPEWNESFTFQIQTRVKNVLEFSICDEDTLTQSDHLLTVLYDLSKLCL RNKTHVKFPLNPEGMEELEVEFLLEENVSSSETLITNGVLVSRQVSCLEVHAESRRPRKRKKNK NLLVMVTDSFENTQCVQPCLEPCCPNPACFHYPKYSQPQLYAEAPKSHWSYRLCCCEAQRNDTV CQPLDCLSDGQPMTLPLGENYELHMKSSPCSNTLDVRLGFSLCQEEVEFLQKRKVAVTKALNQV LQLEEGLHEHEVPMIAIMATGGGTRSMVSLYGHLLGLQKLNLLDCSVYLTGLSGATWTMATLYS DPEWSSKDLEPVVFEARRHVVKDKMPALYPDQLCKWQEELRQHSQEGYKTTFTDFWGKLVEYSL GDKKNECKLSEQRAALCRGQNPLPIYLTINVKDDVSNQDFREWFEFSPYEVGMQKYGAFIPTEL FGSEFFMGRLMKRIPEPEMCYMLGLWSSIFSLNLLDAWNLSHTSEEFFYRWTREKLHDIEDDPL LPEIPRCDANPLETTVVIPATWLSNTFREILTHRPLVSEFHNFLYGLQLHTDYLQNKQFCMWKD TVLDTFPNQLTQFTKHLNLLDTAFFVNSSYAPLLRPERKVDLIIHLNYCAGSQTKPLKQTCEYC TEQNIPFPNYSIQEDDKSLKECYVMENPQEPDAPIVVYFPLINDTFQKYKAPGVERSPEELELG QLNIYGPKSPYATKELTYTEAAFDKLVKLSEYNILNNKDKLIQAVRLAMEKKRMKSQCPS hide sequence

Ensembl Acc Id:

ENSRNOP00000031380 ⟸ ENSRNOT00000030502

RefSeq Acc Id:	XP_038962439 ⟸ XM_039106511
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6AKA4 (UniProtKB/TrEMBL), F1LPY6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038962441 ⟸ XM_039106513
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038962442 ⟸ XM_039106514
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_038962444 ⟸ XM_039106516
- Peptide Label:	isoform X8

Ensembl Acc Id:

ENSRNOP00000095683 ⟸ ENSRNOT00000109239

Ensembl Acc Id:

ENSRNOP00000093379 ⟸ ENSRNOT00000097961

Protein Domains

C2 PLA2c

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-F1LPY6-F1-model_v2	AlphaFold	F1LPY6	1-828	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13692342

Promoter ID:

EPDNEW_R2863

Type:

single initiation site

Name:

Pla2g4e_1

Description:

phospholipase A2, group IVE

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	3	111,994,343 - 111,994,403	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1310595	AgrOrtholog
BioCyc Gene	G2FUF-48181	BioCyc
Ensembl Genes	ENSRNOG00000024904	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000030502.6	UniProtKB/TrEMBL
	ENSRNOT00000097961.1	UniProtKB/TrEMBL
	ENSRNOT00000109239.1	UniProtKB/TrEMBL
Gene3D-CATH	2.60.40.150	UniProtKB/TrEMBL
	Cytosolic phospholipase A2 catalytic domain	UniProtKB/TrEMBL
InterPro	Acyl_Trfase/lysoPlipase	UniProtKB/TrEMBL
	C2_Ca-dep	UniProtKB/TrEMBL
	C2_cPLA2	UniProtKB/TrEMBL
	C2_domain_sf	UniProtKB/TrEMBL
	cPLA2_C2	UniProtKB/TrEMBL
	LysoPLipase_cat_dom	UniProtKB/TrEMBL
NCBI Gene	296091	ENTREZGENE
PANTHER	CYTOSOLIC PHOSPHOLIPASE A2	UniProtKB/TrEMBL
	CYTOSOLIC PHOSPHOLIPASE A2 EPSILON	UniProtKB/TrEMBL
Pfam	cPLA2_C2	UniProtKB/TrEMBL
	PF00168	UniProtKB/TrEMBL
	PLA2_B	UniProtKB/TrEMBL
PhenoGen	Pla2g4e	PhenoGen
PROSITE	PLA2C	UniProtKB/TrEMBL
	PS50004	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000024904	RatGTEx
SMART	PLAc	UniProtKB/TrEMBL
	SM00239	UniProtKB/TrEMBL
Superfamily-SCOP	Acyl_Trfase/lysoPlipase	UniProtKB/TrEMBL
	SSF49562	UniProtKB/TrEMBL
UniProt	A0A8I6AKA4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6ANS2	ENTREZGENE, UniProtKB/TrEMBL
	A0FIP9_RAT	UniProtKB/TrEMBL
	F1LPY6	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-02-27	Pla2g4e	phospholipase A2, group IVE	RGD1310595_predicted	similar to phospholipase A2, group IVB (cytosolic) (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-01-20	RGD1310595_predicted	similar to phospholipase A2, group IVB (cytosolic) (predicted)	LOC296091_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC296091_predicted	similar to phospholipase A2, group IVB (cytosolic) (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Annotations - KEGG (archival)

Send us a Message

Imported Disease Annotations - ClinVar

Imported Annotations - KEGG (archival)