Gle1 (GLE1 RNA export mediator) - Rat Genome Database

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Advanced Search (OLGA)
Gene: Gle1 (GLE1 RNA export mediator) Rattus norvegicus
Analyze
Symbol: Gle1
Name: GLE1 RNA export mediator
RGD ID: 1307329
Description: Predicted to enable several functions, including identical protein binding activity; inositol hexakisphosphate binding activity; and translation initiation factor binding activity. Predicted to be involved in poly(A)+ mRNA export from nucleus. Predicted to be located in cytosol; microtubule organizing center; and nucleus. Predicted to be part of nuclear pore cytoplasmic filaments. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in lethal congenital contracture syndrome 1. Orthologous to human GLE1 (GLE1 RNA export mediator); PARTICIPATES IN NXF1-NXT1 export pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; gentamycin; levetiracetam.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: GLE1 RNA export mediator (yeast); GLE1 RNA export mediator homolog; GLE1 RNA export mediator homolog (yeast); GLE1 RNA export mediator-like (yeast; GLE1 RNA export mediator-like (yeast); GLE1-like protein; Gle1l; LOC362098; MGC116182; mRNA export factor GLE1; nucleoporin GLE1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Gle1-ps1  
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8333,607,160 - 33,638,879 (+)NCBIGRCr8
mRatBN7.2313,209,312 - 13,237,018 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl313,209,322 - 13,237,379 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx316,284,072 - 16,308,209 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0324,869,035 - 24,893,166 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0323,119,866 - 23,143,902 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.038,498,098 - 8,530,218 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl38,498,122 - 8,526,771 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0313,842,286 - 13,874,233 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.438,924,783 - 8,948,712 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.138,925,082 - 8,949,012 (+)NCBI
Celera37,986,359 - 8,010,609 (+)NCBICelera
Cytogenetic Map3p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Postage for the messenger: designating routes for nuclear mRNA export. Natalizio BJ and Wente SR, Trends Cell Biol. 2013 Aug;23(8):365-73. doi: 10.1016/j.tcb.2013.03.006. Epub 2013 Apr 11.
3. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
4. GOA pipeline RGD automated data pipeline
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. Comprehensive gene review and curation RGD comprehensive gene curation
Additional References at PubMed
PMID:12477932   PMID:15489334   PMID:19946888   PMID:22664934   PMID:24243016   PMID:28035044  


Genomics

Comparative Map Data
Gle1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8333,607,160 - 33,638,879 (+)NCBIGRCr8
mRatBN7.2313,209,312 - 13,237,018 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl313,209,322 - 13,237,379 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx316,284,072 - 16,308,209 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0324,869,035 - 24,893,166 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0323,119,866 - 23,143,902 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.038,498,098 - 8,530,218 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl38,498,122 - 8,526,771 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0313,842,286 - 13,874,233 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.438,924,783 - 8,948,712 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.138,925,082 - 8,949,012 (+)NCBI
Celera37,986,359 - 8,010,609 (+)NCBICelera
Cytogenetic Map3p12NCBI
GLE1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh389128,504,692 - 128,542,288 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl9128,504,655 - 128,543,874 (+)EnsemblGRCh38hg38GRCh38
GRCh379131,266,971 - 131,304,567 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 369130,306,792 - 130,344,401 (+)NCBINCBI36Build 36hg18NCBI36
Build 349128,346,524 - 128,381,708NCBI
Celera9101,917,784 - 101,955,385 (+)NCBICelera
Cytogenetic Map9q34.11NCBI
HuRef9100,879,534 - 100,916,497 (+)NCBIHuRef
CHM1_19131,417,671 - 131,455,555 (+)NCBICHM1_1
T2T-CHM13v2.09140,711,552 - 140,749,139 (+)NCBIT2T-CHM13v2.0
Gle1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39229,825,421 - 29,849,444 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl229,825,438 - 29,850,383 (+)EnsemblGRCm39 Ensembl
GRCm38229,935,409 - 29,959,432 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl229,935,426 - 29,960,371 (+)EnsemblGRCm38mm10GRCm38
MGSCv37229,790,929 - 29,814,952 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36229,757,436 - 29,780,664 (+)NCBIMGSCv36mm8
Celera229,639,347 - 29,663,372 (+)NCBICelera
Cytogenetic Map2BNCBI
cM Map220.88NCBI
Gle1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955570970,249 - 1,004,443 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955570970,267 - 1,004,525 (+)NCBIChiLan1.0ChiLan1.0
GLE1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21110,809,781 - 10,847,036 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1910,813,007 - 10,849,391 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0999,627,336 - 99,664,537 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.19128,294,607 - 128,331,301 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl9128,294,607 - 128,331,301 (+)Ensemblpanpan1.1panPan2
GLE1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1955,024,673 - 55,059,297 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl955,024,679 - 55,059,220 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha954,219,221 - 54,254,594 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0955,945,910 - 55,981,669 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl955,945,738 - 55,981,654 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1954,705,230 - 54,741,086 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0955,019,202 - 55,055,497 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0955,111,743 - 55,147,456 (-)NCBIUU_Cfam_GSD_1.0
Gle1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947196,261,442 - 196,295,252 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648716,031,824 - 16,063,803 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648716,031,832 - 16,063,779 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GLE1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1268,894,276 - 268,922,742 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11268,894,281 - 268,922,752 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21302,917,800 - 302,946,270 (+)NCBISscrofa10.2Sscrofa10.2susScr3
GLE1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1129,595,379 - 9,631,193 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl129,594,910 - 9,631,405 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660796,616,681 - 6,652,731 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Gle1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247606,400,263 - 6,427,780 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247606,398,959 - 6,427,881 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Gle1
210 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:367
Count of miRNA genes:230
Interacting mature miRNAs:268
Transcripts:ENSRNOT00000020630
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1558647Cm46Cardiac mass QTL 465.40.0000055heart mass (VT:0007028)heart wet weight (CMO:0000069)31077882330356773Rat
1358357Srcrtb1Stress Responsive Cort Basal QTL 16.360.002blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)3865816227494778Rat
6893355Bw101Body weight QTL 1010.40.38body mass (VT:0001259)body weight (CMO:0000012)31077870430357018Rat
4889966Bss95Bone structure and strength QTL 954.4tibia area (VT:1000281)tibia-fibula cross-sectional area (CMO:0001718)3136847613Rat
1558654Bw56Body weight QTL 564.50.0000171body mass (VT:0001259)body weight (CMO:0000012)31077870430357018Rat
10401810Kidm53Kidney mass QTL 53kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)3822719447233430Rat
1298526Arunc3Aerobic running capacity QTL 32.2exercise endurance trait (VT:0002332)maximum distance run on treadmill (CMO:0001406)3822719433703538Rat
1558650Cm48Cardiac mass QTL 4840.0001heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)31077882330356773Rat
1358905Hrtrt17Heart rate QTL 175.90.000014heart pumping trait (VT:2000009)heart rate (CMO:0000002)31086191289878372Rat
8693641Alc30Alcohol consumption QTL 3020.739drinking behavior trait (VT:0001422)calculated ethanol drink intake rate (CMO:0001615)31043430624512004Rat
70191BpQTLcluster4Blood pressure QTL cluster 43arterial blood pressure trait (VT:2000000)absolute change in systolic blood pressure (CMO:0000607)31077870450302886Rat
631545Bp85Blood pressure QTL 853.1arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3133278763Rat
631679Cm10Cardiac mass QTL 107.340.0001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)3131158234Rat
1558657Cm43Cardiac mass QTL 436.63e-08heart mass (VT:0007028)heart wet weight (CMO:0000069)31077882330356773Rat
2290452Scl56Serum cholesterol level QTL 562.26blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)3191609953Rat
631568Bp92Blood pressure QTL 922.20.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3139874793Rat
70203Gcr2Gastric cancer resistance QTL 22.6stomach morphology trait (VT:0000470)stomach tumor susceptibility score (CMO:0002043)3865816227494778Rat
6893363Bw105Body weight QTL 1052.60.0036body mass (VT:0001259)body weight (CMO:0000012)31077870430357018Rat
70202Alc19Alcohol consumption QTL 192.5drinking behavior trait (VT:0001422)ethanol intake volume to total fluid intake volume ratio (CMO:0001591)3127494778Rat
2312664Scl62Serum cholesterol level QTL 620.05blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)3138710544Rat
61468Bp15Blood pressure QTL 154.4blood pressure trait (VT:0000183)pulse pressure (CMO:0000292)3133278763Rat
631831Alc8Alcohol consumption QTL 82.7consumption behavior trait (VT:0002069)calculated ethanol drink intake rate (CMO:0001615)3133230976Rat

Markers in Region
RH134216  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2313,233,975 - 13,234,177 (+)MAPPERmRatBN7.2
Rnor_6.038,527,199 - 8,527,400NCBIRnor6.0
Rnor_5.0313,871,192 - 13,871,393UniSTSRnor5.0
RGSC_v3.438,949,139 - 8,949,340UniSTSRGSC3.4
Celera38,011,036 - 8,011,237UniSTS
RH 3.4 Map321.9UniSTS
Cytogenetic Map3p12UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001025731 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006233836 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006233838 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010064649 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010064650 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010064651 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010064652 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010064653 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_352196 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_591443 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_591444 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC128578 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC099088 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH474001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217346 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ221837 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000020630   ⟹   ENSRNOP00000020630
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl313,209,322 - 13,228,248 (+)Ensembl
Rnor_6.0 Ensembl38,498,122 - 8,526,771 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000094558   ⟹   ENSRNOP00000078927
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl313,209,322 - 13,230,247 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000099233   ⟹   ENSRNOP00000092246
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl313,209,322 - 13,234,356 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000110881   ⟹   ENSRNOP00000094463
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl313,209,322 - 13,234,356 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000119521   ⟹   ENSRNOP00000086903
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl313,209,322 - 13,237,379 (+)Ensembl
RefSeq Acc Id: NM_001025731   ⟹   NP_001020902
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8333,607,196 - 33,631,401 (+)NCBI
mRatBN7.2313,209,343 - 13,233,549 (+)NCBI
Rnor_6.038,498,122 - 8,526,772 (+)NCBI
Rnor_5.0313,842,286 - 13,874,233 (+)NCBI
RGSC_v3.438,924,783 - 8,948,712 (+)RGD
Celera37,986,359 - 8,010,609 (+)RGD
Sequence:
RefSeq Acc Id: XM_006233836   ⟹   XP_006233898
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8333,607,160 - 33,638,879 (+)NCBI
mRatBN7.2313,209,312 - 13,237,018 (+)NCBI
Rnor_6.038,498,098 - 8,530,218 (+)NCBI
Rnor_5.0313,842,286 - 13,874,233 (+)NCBI
Sequence:
RefSeq Acc Id: XR_010064649
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8333,607,160 - 33,638,879 (+)NCBI
RefSeq Acc Id: XR_010064650
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8333,607,160 - 33,631,390 (+)NCBI
RefSeq Acc Id: XR_010064651
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8333,607,160 - 33,638,879 (+)NCBI
RefSeq Acc Id: XR_010064652
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8333,607,160 - 33,631,390 (+)NCBI
RefSeq Acc Id: XR_010064653
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8333,607,160 - 33,638,879 (+)NCBI
RefSeq Acc Id: NP_001020902   ⟸   NM_001025731
- UniProtKB: Q4KLN4 (UniProtKB/Swiss-Prot),   A6JTT7 (UniProtKB/TrEMBL),   A0A8I6GL68 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006233898   ⟸   XM_006233836
- Peptide Label: isoform X1
- UniProtKB: A0A8I6A4N4 (UniProtKB/TrEMBL),   A0A8I6G464 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000020630   ⟸   ENSRNOT00000020630
Ensembl Acc Id: ENSRNOP00000078927   ⟸   ENSRNOT00000094558
Ensembl Acc Id: ENSRNOP00000086903   ⟸   ENSRNOT00000119521
Ensembl Acc Id: ENSRNOP00000094463   ⟸   ENSRNOT00000110881
Ensembl Acc Id: ENSRNOP00000092246   ⟸   ENSRNOT00000099233

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q4KLN4-F1-model_v2 AlphaFold Q4KLN4 1-698 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13691947
Promoter ID:EPDNEW_R2472
Type:initiation region
Name:Gle1_1
Description:GLE1 RNA export mediator
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.038,498,136 - 8,498,196EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1307329 AgrOrtholog
BioCyc Gene G2FUF-50241 BioCyc
Ensembl Genes ENSRNOG00000015237 Ensembl, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSRNOG00055006443 UniProtKB/Swiss-Prot
  ENSRNOG00060026969 UniProtKB/Swiss-Prot
  ENSRNOG00065026068 UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000020630.8 UniProtKB/TrEMBL
  ENSRNOT00000094558.1 UniProtKB/TrEMBL
  ENSRNOT00000099233.1 UniProtKB/Swiss-Prot
  ENSRNOT00000110881.1 UniProtKB/TrEMBL
  ENSRNOT00000119521.1 UniProtKB/TrEMBL
  ENSRNOT00055010492 UniProtKB/Swiss-Prot
  ENSRNOT00060046894 UniProtKB/Swiss-Prot
  ENSRNOT00065044969 UniProtKB/Swiss-Prot
Gene3D-CATH 1.25.40.510 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7456179 IMAGE-MGC_LOAD
InterPro GLE1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GLE1-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:362098 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGC_CLONE MGC:116182 IMAGE-MGC_LOAD
NCBI Gene 362098 ENTREZGENE
PANTHER NUCLEOPORIN GLE1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR12960 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam GLE1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Gle1 PhenoGen
RatGTEx ENSRNOG00000015237 RatGTEx
  ENSRNOG00055006443 RatGTEx
  ENSRNOG00060026969 RatGTEx
  ENSRNOG00065026068 RatGTEx
UniProt A0A8I6A4N4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6G464 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6GL68 ENTREZGENE, UniProtKB/TrEMBL
  A0A8L2QAQ0_RAT UniProtKB/TrEMBL
  A6JTT7 ENTREZGENE, UniProtKB/TrEMBL
  GLE1_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-07-09 Gle1  GLE1 RNA export mediator  Gle1  GLE1 RNA export mediator homolog (yeast)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-08-29 Gle1  GLE1 RNA export mediator homolog (yeast)  Gle1  GLE1 RNA export mediator (yeast)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-03-04 Gle1  GLE1 RNA export mediator (yeast)  Gle1l  GLE1 RNA export mediator-like (yeast)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-12-06 Gle1l  GLE1 RNA export mediator-like (yeast  Gle1l_predicted  GLE1 RNA export mediator-like (yeast (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-12 Gle1l_predicted  GLE1 RNA export mediator-like (yeast (predicted)      Symbol and Name status set to approved 70820 APPROVED