Ggact (gamma-glutamylamine cyclotransferase)

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Gene: Ggact (gamma-glutamylamine cyclotransferase) Rattus norvegicus

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Symbol:

Ggact

Name:

gamma-glutamylamine cyclotransferase

RGD ID:

1304748

Description:

Predicted to enable gamma-glutamylaminecyclotransferase activity. Predicted to be involved in cellular modified amino acid catabolic process. Predicted to be active in cytosol. Orthologous to human GGACT (gamma-glutamylamine cyclotransferase); INTERACTS WITH 1,2-dimethylhydrazine; 4,4'-sulfonyldiphenol; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

A2ld1; AIG2-like domain 1; AIG2-like domain-containing protein 1; gamma-glutamylaminecyclotransferase; LOC290500; MGC112665; RGD1304748; similar to cDNA sequence BC006662

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	GGACT (gamma-glutamylamine cyclotransferase)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Ggact (gamma-glutamylamine cyclotransferase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Ggact (gamma-glutamylamine cyclotransferase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	GGACT (gamma-glutamylamine cyclotransferase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	GGACT (gamma-glutamylamine cyclotransferase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ggact (gamma-glutamylamine cyclotransferase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	GGACT (gamma-glutamylamine cyclotransferase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	GGACT (gamma-glutamylamine cyclotransferase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ggact (gamma-glutamylamine cyclotransferase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Mus musculus (house mouse):	Ggact (gamma-glutamylamine cyclotransferase)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	GGACT (gamma-glutamylamine cyclotransferase)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	ggact.1 (gamma-glutamylamine cyclotransferase, tandem duplicate 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	ggact.2 (gamma-glutamylamine cyclotransferase, tandem duplicate 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	ggact.3 (gamma-glutamylamine cyclotransferase, tandem duplicate 3)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG2811	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	F42A10.9	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Tina-1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	ggact	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	15	106,375,924 - 106,406,649 (-)	NCBI		GRCr8
mRatBN7.2	15	99,969,246 - 99,998,343 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	15	99,968,282 - 99,993,455 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	15	103,902,683 - 103,926,264 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	15	105,001,305 - 105,024,861 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	15	101,928,558 - 101,952,113 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	15	109,307,683 - 109,336,779 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	15	109,307,904 - 109,316,953 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	15	112,688,790 - 112,716,622 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	15	108,029,945 - 108,053,498 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	15	108,045,724 - 108,069,278 (-)	NCBI
Celera	15	98,739,747 - 98,763,312 (-)	NCBI		Celera
Cytogenetic Map	15	q25	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Anal Atresia, Hypospadias, and Penoscrotal Inversion (ISO)

holoprosencephaly (ISO)

holoprosencephaly 5 (ISO)

propionic acidemia (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-catechin (ISO)

(1->4)-beta-D-glucan (ISO)

1,1-dichloroethene (ISO)

1,2-dimethylhydrazine (EXP)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-sulfonyldiphenol (EXP)

4-hydroxyphenyl retinamide (ISO)

6-propyl-2-thiouracil (EXP)

amitrole (EXP)

amphetamine (EXP)

arsane (ISO)

arsenic atom (ISO)

avobenzone (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP)

bisphenol F (EXP,ISO)

cobalt dichloride (EXP)

cyclosporin A (ISO)

dexamethasone (ISO)

Dibutyl phosphate (ISO)

gentamycin (EXP)

indometacin (ISO)

iron dichloride (ISO)

ketamine (EXP)

methimazole (EXP)

methylmercury chloride (ISO)

paracetamol (EXP)

PCB138 (ISO)

perfluorooctane-1-sulfonic acid (ISO)

phenobarbital (ISO)

pirinixic acid (ISO)

pregnenolone 16alpha-carbonitrile (ISO)

propiconazole (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

tetrachloromethane (ISO)

thioacetamide (EXP)

tributylstannane (EXP)

trichloroethene (EXP)

triphenyl phosphate (ISO)

triticonazole (EXP)

tunicamycin (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular modified amino acid catabolic process (IEA,ISO,ISS)

Cellular Component

cytosol (IBA)

Molecular Function

gamma-glutamylaminecyclotransferase activity (IEA,ISO,ISS)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:20110353	PMID:23376485	PMID:23533145

Genomics

Comparative Map Data

Ggact
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	15	106,375,924 - 106,406,649 (-)	NCBI		GRCr8
mRatBN7.2	15	99,969,246 - 99,998,343 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	15	99,968,282 - 99,993,455 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	15	103,902,683 - 103,926,264 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	15	105,001,305 - 105,024,861 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	15	101,928,558 - 101,952,113 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	15	109,307,683 - 109,336,779 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	15	109,307,904 - 109,316,953 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	15	112,688,790 - 112,716,622 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	15	108,029,945 - 108,053,498 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	15	108,045,724 - 108,069,278 (-)	NCBI
Celera	15	98,739,747 - 98,763,312 (-)	NCBI		Celera
Cytogenetic Map	15	q25	NCBI

GGACT
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	13	100,530,180 - 100,588,789 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	13	100,530,164 - 100,589,528 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	13	101,182,434 - 101,241,043 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	13	99,980,002 - 99,987,974 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	13	82,026,987 - 82,085,620 (-)	NCBI		Celera
Cytogenetic Map	13	q32.3	NCBI
HuRef	13	81,778,487 - 81,837,097 (-)	NCBI		HuRef
CHM1_1	13	101,152,717 - 101,211,314 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	13	99,745,466 - 99,804,072 (-)	NCBI		T2T-CHM13v2.0

Ggact
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	14	123,128,272 - 123,151,173 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	14	123,053,635 - 123,151,169 (-)	Ensembl		GRCm39 Ensembl
GRCm38	14	122,890,860 - 122,913,413 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	14	122,816,223 - 122,913,757 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	14	123,290,082 - 123,312,387 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	14	122,026,054 - 122,048,315 (-)	NCBI		MGSCv36	mm8
Celera	14	121,449,204 - 121,471,425 (-)	NCBI		Celera
Cytogenetic Map	14	E5	NCBI
cM Map	14	66.04	NCBI

Ggact
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955404	10,280,013 - 10,316,531 (+)	NCBI	ChiLan1.0	ChiLan1.0

GGACT
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	14	102,039,592 - 102,113,988 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	13	100,689,407 - 100,781,473 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	13	81,678,715 - 81,757,024 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	13	100,837,605 - 100,895,588 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	13	100,839,483 - 100,839,944 (-)	Ensembl	panpan1.1		panPan2

GGACT
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	22	50,429,066 - 50,471,624 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	22	50,429,190 - 50,470,657 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	22	50,209,180 - 50,251,705 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	22	50,871,064 - 50,913,818 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	22	50,871,200 - 50,914,106 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	22	50,517,921 - 50,560,440 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	22	50,554,164 - 50,596,796 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	22	50,591,542 - 50,634,058 (-)	NCBI		UU_Cfam_GSD_1.0

Ggact
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	185,782,552 - 185,824,920 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936472	10,127,470 - 10,166,552 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936472	10,127,305 - 10,167,543 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

GGACT
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	11	69,287,685 - 69,349,540 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	11	76,548,815 - 76,611,833 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

GGACT
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	3	79,139,506 - 79,213,496 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	3	79,157,780 - 79,158,241 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666046	35,643,631 - 35,720,457 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ggact
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624793	10,677,662 - 10,690,034 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624793	10,655,447 - 10,691,334 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Ggact
99 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	112
Count of miRNA genes:	90
Interacting mature miRNAs:	102
Transcripts:	ENSRNOT00000019158
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
731177	Uae26	Urinary albumin excretion QTL 26	2.4	0.025	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	15	67588667	101769107	Rat
1549844	Bss7	Bone structure and strength QTL 7	6.4		femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	15	75788062	101769107	Rat
2300326	Plaw1	Placental weight QTL 1	15	0.005	placenta mass (VT:0004257)	placenta wet weight (CMO:0002088)	15	68327165	100062518	Rat
70155	Gcs1	Gastric cancer susceptibility QTL1	3.8		stomach morphology trait (VT:0000470)	stomach tumor susceptibility score (CMO:0002043)	15	76306099	101769107	Rat
2317055	Aia10	Adjuvant induced arthritis QTL 10	3.41		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	15	75788062	101769107	Rat
631655	Bp126	Blood pressure QTL 126	4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	15	58156477	101769107	Rat

Markers in Region

RH141187

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	15	99,969,819 - 99,970,031 (+)	MAPPER	mRatBN7.2
Rnor_6.0	15	109,308,430 - 109,308,641	NCBI	Rnor6.0
Rnor_5.0	15	112,689,340 - 112,689,551	UniSTS	Rnor5.0
RGSC_v3.4	15	108,030,480 - 108,030,691	UniSTS	RGSC3.4
Celera	15	98,740,282 - 98,740,493	UniSTS
RH 3.4 Map	15	716.8	UniSTS
Cytogenetic Map	15	q25	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001025634	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001310058	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006252512	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006252513	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006252514	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006252520	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006252521	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006252522	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008770971	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008770972	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017599640	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039093202	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039093203	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039093205	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063274176	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063274177	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063274178	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC098699	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473951	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000015	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000019158 ⟹ ENSRNOP00000000118

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	15	99,969,285 - 99,993,455 (-)	Ensembl
Rnor_6.0 Ensembl	15	109,307,904 - 109,316,953 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000119176 ⟹ ENSRNOP00000092826

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	15	99,968,282 - 99,993,455 (-)	Ensembl

RefSeq Acc Id:

NM_001025634 ⟹ NP_001020805

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	106,375,924 - 106,399,477 (-)	NCBI
mRatBN7.2	15	99,969,285 - 99,992,839 (-)	NCBI
Rnor_6.0	15	109,307,895 - 109,331,447 (-)	NCBI
Rnor_5.0	15	112,688,790 - 112,716,622 (-)	NCBI
RGSC_v3.4	15	108,029,945 - 108,053,498 (-)	RGD
Celera	15	98,739,747 - 98,763,312 (-)	RGD

Sequence:

show sequence

TTCCGCTCCGCGGCCGGGCTCGCTCCTGGTGATCCCCCTGACCCGTGCAGCTGCCGTCATGGTG
TCTCTTCCTGGCAATAGAGAAGTAATTAAAGCAGTGCCTCATCCACAGAGGGCAGAACAGGTGT
ACTTCAATAGCAGGACAAGTTGCTTCCTGAAGGATCCATGTGTATTGTTCAAAACACAATCAGA
AAAAGTGCCTGCAGCCAGATGGCCCACATCTTCGTGTATGGCACCCTGAAGCGGGGCCAGCCCA
ACCACAAAGTCATGCTGGACCAGTCACATGGCTTAGCCACCTTCCGAGGCCGAGGCTGCACAGT
TGAGTCCTTCCCACTGGTGATTGCGGGCGAGCACAACATACCTTGGCTGCTGCACCTGCCAGGC
AAGGGCCATTGCGTGGCAGGTGAAATCTATGAGGTGGATGAGCAGATGTTGCGCTTCCTGGATG
ACTTCGAAGGCTGCCCCAGCATGTACCAGCGTACAGCCCTGCAGGTGCGGGTGCTGGAGTGGGA
GGGTGCTGGAGGCCCTGGGGACAGTGTTCAGTGCTTCGTGTACAGTACAGCCACCTATGCACCC
GAGTGGCTGTTTCTTCCCTACCATAAAAACTATGATTCTGAGGGCCCACACGGGCTCCGCTACA
ACCCCCGGGAAAACAGATGAAGGGCTAGTGCCCCAAATGCCAACAGGGTGGAGGGAATTTGGTA
GCTGCCTGGCATAAGCAGAGCTCTCCCAGTTCAACTATAAAACTATGTTTGTCATATACGCTAA
TCTGATGTTACTTAATTCTGCTTCCGTCTTTAGTGGAGGAGCTTGCATGTACTAGATGAAAAAC
ACTCTAGGCTGAGTCCCCTAAACGGCAGTTACAGAGTACCTGGTGCTCCACACTGCTTTTTTTT
TTTTTTTTTAATTTGCTTTGCTCTAACCTGAACATGGAATCTTTTGAGACTAAAAGGACTGGGC
TGCAGTTGCATCTGAACAGTTTAACATATTGATTCCCATATATAGAACCTAGAAAGAAGTGGTA
AGAGATGCTGATTTTGATCGAATCAGTGTAAAAACATCAAGAAAAGCATGTTGTACCTAAACTA
TGTGCTCCATCCACCCCCACCTGCATTTTCTAAATCACACATAAACTATTAAAATGGCCATTAA
AATAAAA

hide sequence

RefSeq Acc Id:

NM_001310058 ⟹ NP_001296987

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	106,375,924 - 106,399,477 (-)	NCBI
mRatBN7.2	15	99,969,285 - 99,992,839 (-)	NCBI
Rnor_6.0	15	109,307,895 - 109,331,447 (-)	NCBI
Celera	15	98,739,747 - 98,763,312 (-)	NCBI

Sequence:

show sequence

TTCCGCTCCGCGGCCGGGCTCGCTCCTGGTGATCCCCCTGACCCGTGCAGGGACAAGTTGCTTC
CTGAAGGATCCATGTGTATTGTTCAAAACACAATCAGAAAAAGTGCCTGCAGCCAGATGGCCCA
CATCTTCGTGTATGGCACCCTGAAGCGGGGCCAGCCCAACCACAAAGTCATGCTGGACCAGTCA
CATGGCTTAGCCACCTTCCGAGGCCGAGGCTGCACAGTTGAGTCCTTCCCACTGGTGATTGCGG
GCGAGCACAACATACCTTGGCTGCTGCACCTGCCAGGCAAGGGCCATTGCGTGGCAGGTGAAAT
CTATGAGGTGGATGAGCAGATGTTGCGCTTCCTGGATGACTTCGAAGGCTGCCCCAGCATGTAC
CAGCGTACAGCCCTGCAGGTGCGGGTGCTGGAGTGGGAGGGTGCTGGAGGCCCTGGGGACAGTG
TTCAGTGCTTCGTGTACAGTACAGCCACCTATGCACCCGAGTGGCTGTTTCTTCCCTACCATAA
AAACTATGATTCTGAGGGCCCACACGGGCTCCGCTACAACCCCCGGGAAAACAGATGAAGGGCT
AGTGCCCCAAATGCCAACAGGGTGGAGGGAATTTGGTAGCTGCCTGGCATAAGCAGAGCTCTCC
CAGTTCAACTATAAAACTATGTTTGTCATATACGCTAATCTGATGTTACTTAATTCTGCTTCCG
TCTTTAGTGGAGGAGCTTGCATGTACTAGATGAAAAACACTCTAGGCTGAGTCCCCTAAACGGC
AGTTACAGAGTACCTGGTGCTCCACACTGCTTTTTTTTTTTTTTTTTAATTTGCTTTGCTCTAA
CCTGAACATGGAATCTTTTGAGACTAAAAGGACTGGGCTGCAGTTGCATCTGAACAGTTTAACA
TATTGATTCCCATATATAGAACCTAGAAAGAAGTGGTAAGAGATGCTGATTTTGATCGAATCAG
TGTAAAAACATCAAGAAAAGCATGTTGTACCTAAACTATGTGCTCCATCCACCCCCACCTGCAT
TTTCTAAATCACACATAAACTATTAAAATGGCCATTAAAATAAAA

hide sequence

RefSeq Acc Id:

XM_006252512 ⟹ XP_006252574

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	106,375,924 - 106,399,999 (-)	NCBI
mRatBN7.2	15	99,969,246 - 99,992,923 (-)	NCBI
Rnor_6.0	15	109,307,683 - 109,332,796 (-)	NCBI
Rnor_5.0	15	112,688,790 - 112,716,622 (-)	NCBI

Sequence:

show sequence

CGAAACCCTAAGACACCATAAAGTCATTATTTTTAAGGTTCAGTGACTATCAAAGACAGATGAA
TCCAATCTCATCATATTTACCTGGAACCTGGGGTTAGTTGCTTATTTACTCTGTGCACCAGTTG
CTTCCAATAAATACAATGTGATCATTACAGGTTTTATTAATTTCTCCACTGTGAAATGAGATTG
CAGTAAAGCAGTAACTTCAAGCATACTTAGGCCCTTAACTTTCTTCTTGAATGTGTTAGTCTTG
TGGATTAGCATGCCACATTATGAGCTGCTCTGAGACGTTCATATGCACTGTTTTGATTGCTCCC
CTTCTCCACCTCTTTCCTCATCCCTACCTATCTCTGACGTCACGGATATCCTATTACTCCCTGT
TTCTCGACTTCCTAGGTCTTCCTTCTCGTGGTCCCCCTTCTGTAAAGTTGGTGGTTTGTAAATA
TGATGGTCAGGTTTCTTCTAGACTTGGAAATCTATTTAAAATACAACCACTTAAGCATCATTTG
GCTCTACTGGGAATACAAAACAATTTCAAGTACTCCACATACACAAAAATGTCAAAGGGTTGGG
AAATGCTGAAAGGAAAACCAGTAATCACATACTCACTATGGGTCTCTAGGAAGAGACAATGGGC
CTCTTGTCTAGCTATCTCTGTGACATTGCTTTCACCTCCCGGTAGGGACATAAAACTCTCTGCT
ACCTCTCCAGCATCGTGCCTGCCTGCATTCTTCCATGAGGAAAATCTCTAGAGAAAAAGTTGCC
CTCACTTTTTGGTTCTCATACATCTTCTCTGCCTCTTAGTACTAAGGGTGGGATAGAGGGGAAA
GCTAGTTCTTCCATTAACTCCTGAACAAGTTTTATTTTAAAAAGAGTTGATTGCTACCATTACC
TGTATCCAGTAGGGCTGTGTATGAGCAGCTGTGATGCCTTGGCGGTGCATGAATCTGTCCTATG
GAGCCTTCCTCAGATCTGAGCTTAGCATCATCTCAGTGTCTATGTGAAAGGGGTGTGTCTCCAA
TTTTGTGTTTGTCTCTCGGAAGTAGTGAATCTTAGGTGTGTCCGGGTCTAACATGGTGTCAAAG
CATGTGTGTAATGTAGAGCTGAACCTGGTGGGAGCGGTTGTTCCTGTGTCTGGTGGGAGTAGTG
GTGGAGAGCTTGCTTTCATTTCAGAGGAAAGTGGTCTCAGGATAGGTATTTGAGCGGTTCCGGC
GCGTGGAAAAAAATGTGCTTGCCTCCAGGTGTGCGTAGTGGCTCTGGCGCCGCGGGGGCGGGCG
CAGCCGCGAGCAGCCTGCAGGGGGCGCCGCCCGAGGCGGTTTGGTTGCAGTACCTGCCCAGTCG
GGCATTTCCGCTCCGCGGCCGGGCTCGCTCCTGGTGATCCCCCTGACCCGTGCAGTTATTTTGA
GGCTGGCCTGGACCATTCAGTCCTCCTGACTTGGGTGCTCAAGTGCTGTGACTCGGACATGCCT
TACCACACCAGGGACAAGTTGCTTCCTGAAGGATCCATGTGTATTGTTCAAAACACAATCAGAA
AAAGTGCCTGCAGCCAGATGGCCCACATCTTCGTGTATGGCACCCTGAAGCGGGGCCAGCCCAA
CCACAAAGTCATGCTGGACCAGTCACATGGCTTAGCCACCTTCCGAGGCCGAGGCTGCACAGTT
GAGTCCTTCCCACTGGTGATTGCGGGCGAGCACAACATACCTTGGCTGCTGCACCTGCCAGGCA
AGGGCCATTGCGTGGCAGGTGAAATCTATGAGGTGGATGAGCAGATGTTGCGCTTCCTGGATGA
CTTCGAAGGCTGCCCCAGCATGTACCAGCGTACAGCCCTGCAGGTGCGGGTGCTGGAGTGGGAG
GGTGCTGGAGGCCCTGGGGACAGTGTTCAGTGCTTCGTGTACAGTACAGCCACCTATGCACCCG
AGTGGCTGTTTCTTCCCTACCATAAAAACTATGATTCTGAGGGCCCACACGGGCTCCGCTACAA
CCCCCGGGAAAACAGATGAAGGGCTAGTGCCCCAAATGCCAACAGGGTGGAGGGAATTTGGTAG
CTGCCTGGCATAAGCAGAGCTCTCCCAGTTCAACTATAAAACTATGTTTGTCATATACGCTAAT
CTGATGTTACTTAATTCTGCTTCCGTCTTTAGTGGAGGAGCTTGCATGTACTAGATGAAAAACA
CTCTAGGCTGAGTCCCCTAAACGGCAGTTACAGAGTACCTGGTGCTCCACACTGCTTTTTTTTT
TTTTTTTTAATTTGCTTTGCTCTAACCTGAACATGGAATCTTTTGAGACTAAAAGGACTGGGCT
GCAGTTGCATCTGAACAGTTTAACATATTGATTCCCATATATAGAACCTAGAAAGAAGTGGTAA
GAGATGCTGATTTTGATCGAATCAGTGTAAAAACATCAAGAAAAGCATGTTGTACCTAAACTAT
GTGCTCCATCCACCCCCACCTGCATTTTCTAAATCACACATAAACTATTAAAATGGCCATTAAA
ATAAAAGTTTGTTGTTGCTGTTTGGTCCTTCTTTTGGTGTACTTACTTGGTAGAAAGTGTTTTT
CATTCTCATTCAGCAAAGTCAGGAGCACCGACTTGCTGGGAGATGACACAGCTGAGCCCTCAGA
CTTTATGTCGTTGATAGGTGCCCAGCTCTCGGCAGTTTAGCCCGTCTCTGCCACCTGAAGGTGC
AGCCCTTGGGGGAGAGCCTTTCAGAA

hide sequence

RefSeq Acc Id:

XM_006252513 ⟹ XP_006252575

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	106,375,924 - 106,399,371 (-)	NCBI
mRatBN7.2	15	99,969,246 - 99,992,664 (-)	NCBI
Rnor_6.0	15	109,307,683 - 109,331,391 (-)	NCBI
Rnor_5.0	15	112,688,790 - 112,716,622 (-)	NCBI

Sequence:

show sequence

CTCGGAGACAGACTGGGACTGGGAGCCTGGGGCGGCTTAGGGACTCGGTCACCAGCCAGCGGAG
TGTTGGCCGTTAGCGTCTCAGGCGATGCGGGGTCTGCCGGACGGAACCCGCGGGGCGGAGCGTG
CATTTGACCCCGGAAAGCTGCCGGGACGGCCCATGCTGTGAACGCCTTGGCCAAGGCGAGCGGC
AGACAGACACAGACGCTGTCCCGAGCAGAGCAGATGCTTGCTCTCGCGGGACAGATGCCTCTAA
CAGTTATTTTGAGGCTGGCCTGGACCATTCAGTCCTCCTGACTTGGGTGCTCAAGTGCTGTGAC
TCGGACATGCCTTACCACACCAGGGACAAGTTGCTTCCTGAAGGATCCATGTGTATTGTTCAAA
ACACAATCAGAAAAAGTGCCTGCAGCCAGATGGCCCACATCTTCGTGTATGGCACCCTGAAGCG
GGGCCAGCCCAACCACAAAGTCATGCTGGACCAGTCACATGGCTTAGCCACCTTCCGAGGCCGA
GGCTGCACAGTTGAGTCCTTCCCACTGGTGATTGCGGGCGAGCACAACATACCTTGGCTGCTGC
ACCTGCCAGGCAAGGGCCATTGCGTGGCAGGTGAAATCTATGAGGTGGATGAGCAGATGTTGCG
CTTCCTGGATGACTTCGAAGGCTGCCCCAGCATGTACCAGCGTACAGCCCTGCAGGTGCGGGTG
CTGGAGTGGGAGGGTGCTGGAGGCCCTGGGGACAGTGTTCAGTGCTTCGTGTACAGTACAGCCA
CCTATGCACCCGAGTGGCTGTTTCTTCCCTACCATAAAAACTATGATTCTGAGGGCCCACACGG
GCTCCGCTACAACCCCCGGGAAAACAGATGAAGGGCTAGTGCCCCAAATGCCAACAGGGTGGAG
GGAATTTGGTAGCTGCCTGGCATAAGCAGAGCTCTCCCAGTTCAACTATAAAACTATGTTTGTC
ATATACGCTAATCTGATGTTACTTAATTCTGCTTCCGTCTTTAGTGGAGGAGCTTGCATGTACT
AGATGAAAAACACTCTAGGCTGAGTCCCCTAAACGGCAGTTACAGAGTACCTGGTGCTCCACAC
TGCTTTTTTTTTTTTTTTTTAATTTGCTTTGCTCTAACCTGAACATGGAATCTTTTGAGACTAA
AAGGACTGGGCTGCAGTTGCATCTGAACAGTTTAACATATTGATTCCCATATATAGAACCTAGA
AAGAAGTGGTAAGAGATGCTGATTTTGATCGAATCAGTGTAAAAACATCAAGAAAAGCATGTTG
TACCTAAACTATGTGCTCCATCCACCCCCACCTGCATTTTCTAAATCACACATAAACTATTAAA
ATGGCCATTAAAATAAAAGTTTGTTGTTGCTGTTTGGTCCTTCTTTTGGTGTACTTACTTGGTA
GAAAGTGTTTTTCATTCTCATTCAGCAAAGTCAGGAGCACCGACTTGCTGGGAGATGACACAGC
TGAGCCCTCAGACTTTATGTCGTTGATAGGTGCCCAGCTCTCGGCAGTTTAGCCCGTCTCTGCC
ACCTGAAGGTGCAGCCCTTGGGGGAGAGCCTTTCAGAA

hide sequence

RefSeq Acc Id:

XM_006252520 ⟹ XP_006252582

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	106,375,924 - 106,406,649 (-)	NCBI
mRatBN7.2	15	99,969,246 - 99,998,343 (-)	NCBI
Rnor_6.0	15	109,307,683 - 109,336,779 (-)	NCBI
Rnor_5.0	15	112,688,790 - 112,716,622 (-)	NCBI

Sequence:

show sequence

CCAGTCCTCCACTTCCTGATCAGTCCTCCACTTCCTGATTACAGCCCTCCACTTCCTGATTACA
GTCCTTCACTTCCTGATCACAGTCCTCCACTTCCTGACCACAGTCCTTCACTTCCTGATCACAG
TCCTCCACTTCCTGATTACAGTCCTTCACGTCCTGATCACAGTCCTCCACTTCCTGACCAGAGT
CCTTCACTTCCTGATCACAGTCCTCCACTTCCTGATCACAGTCCTTCACTTCCTGATCAGTCCT
CCACTTCCTGACCACAGTCCTTCACTTCCTGATCAGTCCTCCACCTCCTGATCACAGTCTTCCA
CTTCCTGACCACAGTCCTTCACTTCTTGATTACAGTCCTCCACTTCCTGATCACAGTCCTTCAC
TTCCTGATCACAGTCCTCCACTTCCTGATTACAGTCCTCCACTTCCTGATTACAGTCCTTCACT
TCCTGATCACAGTCCTCCACTTCCTGACCAGAGTCCTTCACTTCCTGATCAGTCCTCCACTTCC
TGATTACAGTCCTTCACTTCCTGATCATAGTCCTCCACTTCCTGATCAGTCCTCCACCTCCTGA
TCACAGTCCTTCACTTCCTGATCACAGTCCTCCACTTCCTGATTACAGTCCTTCACTTCCTGAT
CATAGTCCTCCACTTCCTATCAGTCCTCCACCTCCTGATCACAGTCCTTCACTTCCTGATCACA
GTCCTCCATCTCCTGATCACAGTCCTTCACTTCCTGATCACAGTCCTCCACTTCCTGATCAGTC
CTCCACCTCCTGATCACAGTCCTTCACTTCCTGATCAGTCCTCCACTTCCTGACCACAGTCCTT
CACTTCCTTGGGTTTGTTTCTCAGCTCAGCTGTGTTGCTGCAGGTTCTCTATCTGGTCACTCAG
ATTTGTTTCAGCTTACATGCATGCTTAAGTTCTTTTAGGTTTCATCTCATTAGACACAGCCATC
CATCCCCTCACAGGGCCTTCTGGTTTTGAGTCTCATATTACCTAGTGTATTCATTGCATATGGC
TTCAGATTACTGACTTGAAAAGTCATATAGAAGATTGAGCTCAGCATCGAAGCTTCGAACATCT
GTGTCTATATTCTTAATCAACCTGCCTGGACCTGGAGTTGACAGACACATCTTGGTACCCCTAG
GTAGATATACAAAGCTGGACGTGGAGATACAAGGCAGGAGGATGGGACAAGTTGCTTCCTGAAG
GATCCATGTGTATTGTTCAAAACACAATCAGAAAAAGTGCCTGCAGCCAGATGGCCCACATCTT
CGTGTATGGCACCCTGAAGCGGGGCCAGCCCAACCACAAAGTCATGCTGGACCAGTCACATGGC
TTAGCCACCTTCCGAGGCCGAGGCTGCACAGTTGAGTCCTTCCCACTGGTGATTGCGGGCGAGC
ACAACATACCTTGGCTGCTGCACCTGCCAGGCAAGGGCCATTGCGTGGCAGGTGAAATCTATGA
GGTGGATGAGCAGATGTTGCGCTTCCTGGATGACTTCGAAGGCTGCCCCAGCATGTACCAGCGT
ACAGCCCTGCAGGTGCGGGTGCTGGAGTGGGAGGGTGCTGGAGGCCCTGGGGACAGTGTTCAGT
GCTTCGTGTACAGTACAGCCACCTATGCACCCGAGTGGCTGTTTCTTCCCTACCATAAAAACTA
TGATTCTGAGGGCCCACACGGGCTCCGCTACAACCCCCGGGAAAACAGATGAAGGGCTAGTGCC
CCAAATGCCAACAGGGTGGAGGGAATTTGGTAGCTGCCTGGCATAAGCAGAGCTCTCCCAGTTC
AACTATAAAACTATGTTTGTCATATACGCTAATCTGATGTTACTTAATTCTGCTTCCGTCTTTA
GTGGAGGAGCTTGCATGTACTAGATGAAAAACACTCTAGGCTGAGTCCCCTAAACGGCAGTTAC
AGAGTACCTGGTGCTCCACACTGCTTTTTTTTTTTTTTTTTAATTTGCTTTGCTCTAACCTGAA
CATGGAATCTTTTGAGACTAAAAGGACTGGGCTGCAGTTGCATCTGAACAGTTTAACATATTGA
TTCCCATATATAGAACCTAGAAAGAAGTGGTAAGAGATGCTGATTTTGATCGAATCAGTGTAAA
AACATCAAGAAAAGCATGTTGTACCTAAACTATGTGCTCCATCCACCCCCACCTGCATTTTCTA
AATCACACATAAACTATTAAAATGGCCATTAAAATAAAAGTTTGTTGTTGCTGTTTGGTCCTTC
TTTTGGTGTACTTACTTGGTAGAAAGTGTTTTTCATTCTCATTCAGCAAAGTCAGGAGCACCGA
CTTGCTGGGAGATGACACAGCTGAGCCCTCAGACTTTATGTCGTTGATAGGTGCCCAGCTCTCG
GCAGTTTAGCCCGTCTCTGCCACCTGAAGGTGCAGCCCTTGGGGGAGAGCCTTTCAGAA

hide sequence

RefSeq Acc Id:

XM_006252521 ⟹ XP_006252583

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	106,375,924 - 106,399,372 (-)	NCBI
mRatBN7.2	15	99,969,246 - 99,992,674 (-)	NCBI
Rnor_6.0	15	109,307,683 - 109,331,391 (-)	NCBI
Rnor_5.0	15	112,688,790 - 112,716,622 (-)	NCBI

Sequence:

show sequence

CTCGGAGACAGACTGGGACTGGGAGCCTGGGGCGGCTTAGGGACTCGGTCACCAGCCAGCGGAG
TGTTGGCCGTTAGCGTCTCAGGCGATGCGGGGTCTGCCGGACGGAACCCGCGGGGCGGAGCGTG
CATTTGACCCCGGAAAGCTGCCGGGACGGCCCATGCTGTGAACGCCTTGGCCAAGGCGAGCGGC
AGACAGACACAGACGCTGTCCCGAGCAGAGCAGATGCTTGCTCTCGCGGGACAGATGCCTCTAA
CAGGGACAAGTTGCTTCCTGAAGGATCCATGTGTATTGTTCAAAACACAATCAGAAAAAGTGCC
TGCAGCCAGATGGCCCACATCTTCGTGTATGGCACCCTGAAGCGGGGCCAGCCCAACCACAAAG
TCATGCTGGACCAGTCACATGGCTTAGCCACCTTCCGAGGCCGAGGCTGCACAGTTGAGTCCTT
CCCACTGGTGATTGCGGGCGAGCACAACATACCTTGGCTGCTGCACCTGCCAGGCAAGGGCCAT
TGCGTGGCAGGTGAAATCTATGAGGTGGATGAGCAGATGTTGCGCTTCCTGGATGACTTCGAAG
GCTGCCCCAGCATGTACCAGCGTACAGCCCTGCAGGTGCGGGTGCTGGAGTGGGAGGGTGCTGG
AGGCCCTGGGGACAGTGTTCAGTGCTTCGTGTACAGTACAGCCACCTATGCACCCGAGTGGCTG
TTTCTTCCCTACCATAAAAACTATGATTCTGAGGGCCCACACGGGCTCCGCTACAACCCCCGGG
AAAACAGATGAAGGGCTAGTGCCCCAAATGCCAACAGGGTGGAGGGAATTTGGTAGCTGCCTGG
CATAAGCAGAGCTCTCCCAGTTCAACTATAAAACTATGTTTGTCATATACGCTAATCTGATGTT
ACTTAATTCTGCTTCCGTCTTTAGTGGAGGAGCTTGCATGTACTAGATGAAAAACACTCTAGGC
TGAGTCCCCTAAACGGCAGTTACAGAGTACCTGGTGCTCCACACTGCTTTTTTTTTTTTTTTTT
AATTTGCTTTGCTCTAACCTGAACATGGAATCTTTTGAGACTAAAAGGACTGGGCTGCAGTTGC
ATCTGAACAGTTTAACATATTGATTCCCATATATAGAACCTAGAAAGAAGTGGTAAGAGATGCT
GATTTTGATCGAATCAGTGTAAAAACATCAAGAAAAGCATGTTGTACCTAAACTATGTGCTCCA
TCCACCCCCACCTGCATTTTCTAAATCACACATAAACTATTAAAATGGCCATTAAAATAAAAGT
TTGTTGTTGCTGTTTGGTCCTTCTTTTGGTGTACTTACTTGGTAGAAAGTGTTTTTCATTCTCA
TTCAGCAAAGTCAGGAGCACCGACTTGCTGGGAGATGACACAGCTGAGCCCTCAGACTTTATGT
CGTTGATAGGTGCCCAGCTCTCGGCAGTTTAGCCCGTCTCTGCCACCTGAAGGTGCAGCCCTTG
GGGGAGAGCCTTTCAGAA

hide sequence

RefSeq Acc Id:

XM_006252522 ⟹ XP_006252584

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	106,375,924 - 106,399,372 (-)	NCBI
mRatBN7.2	15	99,969,246 - 99,992,503 (-)	NCBI
Rnor_6.0	15	109,307,683 - 109,331,125 (-)	NCBI
Rnor_5.0	15	112,688,790 - 112,716,622 (-)	NCBI

Sequence:

show sequence

AAGATCCTAAGGAAACGAGGCTAGCAGTTTTCAAAAGTAATGTTTTTTATTATTTTAGGAGTTA
TTTATGTGTGAAAAGACCAAAACCTGGAAAAGAATTCAAAACCGACTTCGGTTGGTCAGTTTCT
GATCTTGGTTCCCTTTGGAGCCATTAATAAAACACCTGGATCTTTGGCGATCCTTGCCTTTGAT
TCTGTTCGTGGCTATTATTGCTATTTAGCTCTAATCAACGAGTTACAACGGCACAGCCTCACTC
AAAACCCTTCAGAGGTGTGCATGTGTTTTAACTTAGCTTAATTCCAAGCTCATTTGTTTATGTT
AAAGGAAATCCATTAGAGTAAGAGCCTTTTTTTTTTTTTAAAGAGTGATAGGTTGGAGGTCCCA
GGAAGAAATAATGAGTTAAAAATAAAGGCTATTTTTGAATCAATTGGAATGACCTCTGGGGTGG
GGGGACAAGTTGCTTCCTGAAGGATCCATGTGTATTGTTCAAAACACAATCAGAAAAAGTGCCT
GCAGCCAGATGGCCCACATCTTCGTGTATGGCACCCTGAAGCGGGGCCAGCCCAACCACAAAGT
CATGCTGGACCAGTCACATGGCTTAGCCACCTTCCGAGGCCGAGGCTGCACAGTTGAGTCCTTC
CCACTGGTGATTGCGGGCGAGCACAACATACCTTGGCTGCTGCACCTGCCAGGCAAGGGCCATT
GCGTGGCAGGTGAAATCTATGAGGTGGATGAGCAGATGTTGCGCTTCCTGGATGACTTCGAAGG
CTGCCCCAGCATGTACCAGCGTACAGCCCTGCAGGTGCGGGTGCTGGAGTGGGAGGGTGCTGGA
GGCCCTGGGGACAGTGTTCAGTGCTTCGTGTACAGTACAGCCACCTATGCACCCGAGTGGCTGT
TTCTTCCCTACCATAAAAACTATGATTCTGAGGGCCCACACGGGCTCCGCTACAACCCCCGGGA
AAACAGATGAAGGGCTAGTGCCCCAAATGCCAACAGGGTGGAGGGAATTTGGTAGCTGCCTGGC
ATAAGCAGAGCTCTCCCAGTTCAACTATAAAACTATGTTTGTCATATACGCTAATCTGATGTTA
CTTAATTCTGCTTCCGTCTTTAGTGGAGGAGCTTGCATGTACTAGATGAAAAACACTCTAGGCT
GAGTCCCCTAAACGGCAGTTACAGAGTACCTGGTGCTCCACACTGCTTTTTTTTTTTTTTTTTA
ATTTGCTTTGCTCTAACCTGAACATGGAATCTTTTGAGACTAAAAGGACTGGGCTGCAGTTGCA
TCTGAACAGTTTAACATATTGATTCCCATATATAGAACCTAGAAAGAAGTGGTAAGAGATGCTG
ATTTTGATCGAATCAGTGTAAAAACATCAAGAAAAGCATGTTGTACCTAAACTATGTGCTCCAT
CCACCCCCACCTGCATTTTCTAAATCACACATAAACTATTAAAATGGCCATTAAAATAAAAGTT
TGTTGTTGCTGTTTGGTCCTTCTTTTGGTGTACTTACTTGGTAGAAAGTGTTTTTCATTCTCAT
TCAGCAAAGTCAGGAGCACCGACTTGCTGGGAGATGACACAGCTGAGCCCTCAGACTTTATGTC
GTTGATAGGTGCCCAGCTCTCGGCAGTTTAGCCCGTCTCTGCCACCTGAAGGTGCAGCCCTTGG
GGGAGAGCCTTTCAGAA

hide sequence

RefSeq Acc Id:

XM_039093202 ⟹ XP_038949130

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	106,375,924 - 106,399,510 (-)	NCBI
mRatBN7.2	15	99,969,246 - 99,992,872 (-)	NCBI

RefSeq Acc Id:

XM_039093203 ⟹ XP_038949131

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	106,375,924 - 106,399,371 (-)	NCBI
mRatBN7.2	15	99,969,246 - 99,992,541 (-)	NCBI

RefSeq Acc Id:

XM_039093205 ⟹ XP_038949133

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	106,375,924 - 106,399,371 (-)	NCBI
mRatBN7.2	15	99,969,246 - 99,992,502 (-)	NCBI

RefSeq Acc Id:

XM_063274176 ⟹ XP_063130246

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	106,375,924 - 106,406,649 (-)	NCBI

RefSeq Acc Id:

XM_063274177 ⟹ XP_063130247

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	106,375,924 - 106,399,371 (-)	NCBI

RefSeq Acc Id:

XM_063274178 ⟹ XP_063130248

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	106,375,924 - 106,406,649 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001020805	(Get FASTA)	NCBI Sequence Viewer
	NP_001296987	(Get FASTA)	NCBI Sequence Viewer
	XP_006252574	(Get FASTA)	NCBI Sequence Viewer
	XP_006252575	(Get FASTA)	NCBI Sequence Viewer
	XP_006252582	(Get FASTA)	NCBI Sequence Viewer
	XP_006252583	(Get FASTA)	NCBI Sequence Viewer
	XP_006252584	(Get FASTA)	NCBI Sequence Viewer
	XP_038949130	(Get FASTA)	NCBI Sequence Viewer
	XP_038949131	(Get FASTA)	NCBI Sequence Viewer
	XP_038949133	(Get FASTA)	NCBI Sequence Viewer
	XP_063130246	(Get FASTA)	NCBI Sequence Viewer
	XP_063130247	(Get FASTA)	NCBI Sequence Viewer
	XP_063130248	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH98699	(Get FASTA)	NCBI Sequence Viewer
	EDM02589	(Get FASTA)	NCBI Sequence Viewer
	EDM02590	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000000118.3
	ENSRNOP00000092826.1
	ENSRNOP00060004443
GenBank Protein	Q4KM86	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_001020805 ⟸ NM_001025634
- UniProtKB:	Q4KM86 (UniProtKB/Swiss-Prot), A6HUM7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MCIVQNTIRKSACSQMAHIFVYGTLKRGQPNHKVMLDQSHGLATFRGRGCTVESFPLVIAGEHN IPWLLHLPGKGHCVAGEIYEVDEQMLRFLDDFEGCPSMYQRTALQVRVLEWEGAGGPGDSVQCF VYSTATYAPEWLFLPYHKNYDSEGPHGLRYNPRENR hide sequence

RefSeq Acc Id:	XP_006252582 ⟸ XM_006252520
- Peptide Label:	isoform X2
- UniProtKB:	Q4KM86 (UniProtKB/Swiss-Prot), A6HUM7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MCIVQNTIRKSACSQMAHIFVYGTLKRGQPNHKVMLDQSHGLATFRGRGCTVESFPLVIAGEHN IPWLLHLPGKGHCVAGEIYEVDEQMLRFLDDFEGCPSMYQRTALQVRVLEWEGAGGPGDSVQCF VYSTATYAPEWLFLPYHKNYDSEGPHGLRYNPRENR hide sequence

RefSeq Acc Id:	XP_006252574 ⟸ XM_006252512
- Peptide Label:	isoform X1
- UniProtKB:	Q4KM86 (UniProtKB/Swiss-Prot), A0A8L2PXS0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPYHTRDKLLPEGSMCIVQNTIRKSACSQMAHIFVYGTLKRGQPNHKVMLDQSHGLATFRGRGC TVESFPLVIAGEHNIPWLLHLPGKGHCVAGEIYEVDEQMLRFLDDFEGCPSMYQRTALQVRVLE WEGAGGPGDSVQCFVYSTATYAPEWLFLPYHKNYDSEGPHGLRYNPRENR hide sequence

RefSeq Acc Id:	XP_006252575 ⟸ XM_006252513
- Peptide Label:	isoform X1
- UniProtKB:	Q4KM86 (UniProtKB/Swiss-Prot), A0A8L2PXS0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPYHTRDKLLPEGSMCIVQNTIRKSACSQMAHIFVYGTLKRGQPNHKVMLDQSHGLATFRGRGC TVESFPLVIAGEHNIPWLLHLPGKGHCVAGEIYEVDEQMLRFLDDFEGCPSMYQRTALQVRVLE WEGAGGPGDSVQCFVYSTATYAPEWLFLPYHKNYDSEGPHGLRYNPRENR hide sequence

RefSeq Acc Id:	XP_006252583 ⟸ XM_006252521
- Peptide Label:	isoform X2
- UniProtKB:	Q4KM86 (UniProtKB/Swiss-Prot), A6HUM7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MCIVQNTIRKSACSQMAHIFVYGTLKRGQPNHKVMLDQSHGLATFRGRGCTVESFPLVIAGEHN IPWLLHLPGKGHCVAGEIYEVDEQMLRFLDDFEGCPSMYQRTALQVRVLEWEGAGGPGDSVQCF VYSTATYAPEWLFLPYHKNYDSEGPHGLRYNPRENR hide sequence

RefSeq Acc Id:	XP_006252584 ⟸ XM_006252522
- Peptide Label:	isoform X2
- UniProtKB:	Q4KM86 (UniProtKB/Swiss-Prot), A6HUM7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MCIVQNTIRKSACSQMAHIFVYGTLKRGQPNHKVMLDQSHGLATFRGRGCTVESFPLVIAGEHN IPWLLHLPGKGHCVAGEIYEVDEQMLRFLDDFEGCPSMYQRTALQVRVLEWEGAGGPGDSVQCF VYSTATYAPEWLFLPYHKNYDSEGPHGLRYNPRENR hide sequence

RefSeq Acc Id:	NP_001296987 ⟸ NM_001310058
- UniProtKB:	Q4KM86 (UniProtKB/Swiss-Prot), A6HUM7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MCIVQNTIRKSACSQMAHIFVYGTLKRGQPNHKVMLDQSHGLATFRGRGCTVESFPLVIAGEHN IPWLLHLPGKGHCVAGEIYEVDEQMLRFLDDFEGCPSMYQRTALQVRVLEWEGAGGPGDSVQCF VYSTATYAPEWLFLPYHKNYDSEGPHGLRYNPRENR hide sequence

Ensembl Acc Id:

ENSRNOP00000000118 ⟸ ENSRNOT00000019158

RefSeq Acc Id:	XP_038949130 ⟸ XM_039093202
- Peptide Label:	isoform X2
- UniProtKB:	Q4KM86 (UniProtKB/Swiss-Prot), A6HUM7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038949131 ⟸ XM_039093203
- Peptide Label:	isoform X2
- UniProtKB:	Q4KM86 (UniProtKB/Swiss-Prot), A6HUM7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038949133 ⟸ XM_039093205
- Peptide Label:	isoform X2
- UniProtKB:	Q4KM86 (UniProtKB/Swiss-Prot), A6HUM7 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000092826 ⟸ ENSRNOT00000119176

RefSeq Acc Id:	XP_063130248 ⟸ XM_063274178
- Peptide Label:	isoform X2
- UniProtKB:	Q4KM86 (UniProtKB/Swiss-Prot), A6HUM7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063130246 ⟸ XM_063274176
- Peptide Label:	isoform X1
- UniProtKB:	Q4KM86 (UniProtKB/Swiss-Prot), A0A8L2PXS0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063130247 ⟸ XM_063274177
- Peptide Label:	isoform X1
- UniProtKB:	Q4KM86 (UniProtKB/Swiss-Prot), A0A8L2PXS0 (UniProtKB/TrEMBL)

Protein Domains

Gamma-glutamylcyclotransferase AIG2-like

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q4KM86-F1-model_v2	AlphaFold	Q4KM86	1-149	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1304748	AgrOrtholog
BioCyc Gene	G2FUF-12335	BioCyc
Ensembl Genes	ENSRNOG00000027040	Ensembl, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ENSRNOG00060003651	UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000019158.6	UniProtKB/TrEMBL
	ENSRNOT00000119176.1	UniProtKB/Swiss-Prot
	ENSRNOT00060006024	UniProtKB/Swiss-Prot
Gene3D-CATH	Gamma-glutamyl cyclotransferase-like	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7386922	IMAGE-MGC_LOAD
InterPro	AIG2-like	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	GGACT	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	GGCT-like	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	GGCT-like_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	rno:290500	UniProtKB/TrEMBL
MGC_CLONE	MGC:112665	IMAGE-MGC_LOAD
NCBI Gene	290500	ENTREZGENE
PANTHER	GAMMA-GLUTAMYLAMINECYCLOTRANSFERASE	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PTHR12510	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	GGACT	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Ggact	PhenoGen
RatGTEx	ENSRNOG00000027040	RatGTEx
	ENSRNOG00060003651	RatGTEx
Superfamily-SCOP	SSF110857	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A8L2PXS0	ENTREZGENE, UniProtKB/TrEMBL
	A6HUM7	ENTREZGENE, UniProtKB/TrEMBL
	GGACT_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-09-09	A2ld1	AIG2-like domain 1	RGD1304748	similar to cDNA sequence BC006662	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-12-06	RGD1304748	similar to cDNA sequence BC006662	RGD1304748_predicted	similar to cDNA sequence BC006662 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-20	RGD1304748_predicted	similar to cDNA sequence BC006662 (predicted)	LOC290500_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC290500_predicted	similar to cDNA sequence BC006662 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar