GGACT (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 14 | 102,039,592 - 102,113,988 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 13 | 100,689,407 - 100,781,473 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 13 | 81,678,715 - 81,757,024 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 13 | 100,837,605 - 100,895,588 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 13 | 100,839,483 - 100,839,944 (-) | Ensembl | panpan1.1 | | panPan2 | |
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GGACT (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 13 | 100,530,180 - 100,588,789 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 13 | 100,530,164 - 100,589,528 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 13 | 101,182,434 - 101,241,043 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 13 | 99,980,002 - 99,987,974 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 13 | 82,026,987 - 82,085,620 (-) | NCBI | | Celera | | | Cytogenetic Map | 13 | q32.3 | NCBI | | | | | HuRef | 13 | 81,778,487 - 81,837,097 (-) | NCBI | | HuRef | | | CHM1_1 | 13 | 101,152,717 - 101,211,314 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 13 | 99,745,466 - 99,804,072 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Ggact (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 14 | 123,128,272 - 123,151,173 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 14 | 123,053,635 - 123,151,169 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 14 | 122,890,860 - 122,913,413 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 14 | 122,816,223 - 122,913,757 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 14 | 123,290,082 - 123,312,387 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 14 | 122,026,054 - 122,048,315 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 14 | 121,449,204 - 121,471,425 (-) | NCBI | | Celera | | | Cytogenetic Map | 14 | E5 | NCBI | | | | | cM Map | 14 | 66.04 | NCBI | | | | |
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Ggact (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 15 | 106,375,924 - 106,406,649 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 15 | 99,969,246 - 99,998,343 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 15 | 99,968,282 - 99,993,455 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 15 | 103,902,683 - 103,926,264 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 15 | 105,001,305 - 105,024,861 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 15 | 101,928,558 - 101,952,113 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 15 | 109,307,683 - 109,336,779 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 15 | 109,307,904 - 109,316,953 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 15 | 112,688,790 - 112,716,622 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 15 | 108,029,945 - 108,053,498 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 15 | 108,045,724 - 108,069,278 (-) | NCBI | | | | | Celera | 15 | 98,739,747 - 98,763,312 (-) | NCBI | | Celera | | | Cytogenetic Map | 15 | q25 | NCBI | | | | |
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Ggact (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 | NW_004955404 | 10,280,013 - 10,316,531 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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GGACT (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 22 | 50,429,066 - 50,471,624 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 22 | 50,429,190 - 50,470,657 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 22 | 50,209,180 - 50,251,705 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 22 | 50,871,064 - 50,913,818 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 22 | 50,871,200 - 50,914,106 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 22 | 50,517,921 - 50,560,440 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 22 | 50,554,164 - 50,596,796 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 22 | 50,591,542 - 50,634,058 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Ggact (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024404945 | 185,782,552 - 185,824,920 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936472 | 10,127,470 - 10,166,552 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936472 | 10,127,305 - 10,167,543 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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GGACT (Sus scrofa - pig) |
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GGACT (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 3 | 79,139,506 - 79,213,496 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 3 | 79,157,780 - 79,158,241 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666046 | 35,643,631 - 35,720,457 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Ggact (Heterocephalus glaber - naked mole-rat) |
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