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Gene: Fermt2 (FERM domain containing kindlin 2) Ictidomys tridecemlineatus

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Symbol:

Fermt2

Name:

FERM domain containing kindlin 2

RGD ID:

12683352

Description:

ENCODES a protein that exhibits actin binding (inferred); actin filament binding (inferred); integrin binding (inferred); INVOLVED IN cell adhesion (ortholog); protein localization to cell junction (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); angle-closure glaucoma (ortholog); urinary bladder cancer (ortholog); FOUND IN adherens junction (inferred); anchoring junction (inferred); cell junction (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

fermitin family homolog 2; fermitin family member 2; fermitin family member 2, transcript variant X1; fermitin family member 2, transcript variant X2; fermitin family member 2, transcript variant X3; fermitin family member 2, transcript variant X4

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	76,153,793 - 76,234,113 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936697	1,927,812 - 2,008,268 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936697	1,927,817 - 2,008,268 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

acute myeloid leukemia (ISO)

angle-closure glaucoma (ISO)

urinary bladder cancer (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

adherens junction maintenance (IEA)

cell adhesion (IEA,ISO)

cell-matrix adhesion (IEA)

focal adhesion assembly (IEA)

integrin activation (IEA)

integrin-mediated signaling pathway (IEA)

limb development (IEA)

negative regulation of fat cell differentiation (IEA)

negative regulation of vascular permeability (IEA)

positive regulation of cell migration (IEA)

positive regulation of epithelial to mesenchymal transition (IEA)

positive regulation of ERK1 and ERK2 cascade (IEA)

positive regulation of focal adhesion assembly (IEA)

positive regulation of integrin activation (IEA)

positive regulation of mesenchymal stem cell proliferation (IEA)

positive regulation of osteoblast differentiation (IEA)

positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (IEA)

positive regulation of protein localization to nucleus (IEA)

positive regulation of Rho protein signal transduction (IEA)

positive regulation of stress fiber assembly (IEA)

positive regulation of substrate adhesion-dependent cell spreading (IEA)

positive regulation of wound healing, spreading of epidermal cells (IEA)

protein localization to cell junction (ISO)

protein localization to membrane (IEA)

regulation of cell morphogenesis (IEA)

substrate adhesion-dependent cell spreading (IEA)

transforming growth factor beta receptor signaling pathway (IEA)

Wnt signaling pathway (IEA)

Cellular Component

adherens junction (IEA)

anchoring junction (IEA)

cell junction (IEA)

cell projection (IEA)

cell-substrate junction (IEA)

cytoplasm (IEA)

cytoplasmic side of plasma membrane (IEA)

cytosol (IEA)

focal adhesion (IEA)

nucleoplasm (IEA)

nucleus (IEA)

plasma membrane (IEA)

stress fiber (IEA)

Molecular Function

actin binding (IEA)

actin filament binding (IEA)

integrin binding (IEA)

phosphatidylinositol-3,4,5-trisphosphate binding (IEA)

protein binding (ISO)

protein kinase binding (IEA)

protein serine/threonine kinase activator activity (IEA)

protein serine/threonine kinase binding (IEA)

SMAD binding (IEA)

type I transforming growth factor beta receptor binding (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

integrin mediated signaling pathway (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Fermt2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	76,153,793 - 76,234,113 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936697	1,927,812 - 2,008,268 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936697	1,927,817 - 2,008,268 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

FERMT2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	14	52,857,273 - 52,951,050 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	14	52,857,267 - 52,952,435 (-)	Ensembl			hg38	GRCh38
GRCh37	14	53,323,991 - 53,417,768 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	14	52,393,743 - 52,487,460 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	14	52,393,742 - 52,487,460	NCBI
Celera	14	33,373,704 - 33,467,553 (-)	NCBI		Celera
Cytogenetic Map	14	q22.1	NCBI
HuRef	14	33,486,674 - 33,581,054 (-)	NCBI		HuRef
CHM1_1	14	53,262,863 - 53,356,715 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	14	47,065,165 - 47,158,990 (-)	NCBI		T2T-CHM13v2.0

Fermt2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	14	45,696,252 - 45,767,767 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	14	45,696,252 - 45,767,575 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	14	45,458,792 - 45,530,310 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	14	45,458,795 - 45,530,118 (-)	Ensembl			mm10	GRCm38
MGSCv37	14	46,078,467 - 46,149,740 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	14	44,380,669 - 44,451,942 (-)	NCBI		MGSCv36	mm8
Celera	14	41,642,480 - 41,713,283 (-)	NCBI		Celera
Cytogenetic Map	14	C1	NCBI
cM Map	14	22.97	NCBI

Fermt2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	15	21,162,603 - 21,257,995 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	15	21,162,605 - 21,258,115 (-)	Ensembl				GRCr8
mRatBN7.2	15	18,682,927 - 18,751,959 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	15	18,682,927 - 18,751,811 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	15	21,475,374 - 21,544,137 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	15	22,432,342 - 22,501,106 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	15	20,688,917 - 20,757,681 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd	15	19,902,750 - 19,971,584 (-)	NCBI		Dahl_SR_JrHsd
Lyon_Normotensive	15	19,808,525 - 19,877,359 (-)	NCBI		Lyon_Normotensive
Lyon_Hypertensive	15	19,891,269 - 19,960,116 (-)	NCBI		Lyon_Hypertensive
F344_StmMcwi	15	20,490,856 - 20,559,709 (-)	NCBI		F344_StmMcwi
Rnor_6.0	15	19,807,806 - 19,876,557 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	15	19,807,808 - 19,876,408 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	15	23,771,816 - 23,840,554 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	15	21,358,411 - 21,427,264 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	15	19,110,289 - 19,178,605 (-)	NCBI		Celera
RGSC_v3.1	15	21,358,412 - 21,427,264 (-)	NCBI
Cytogenetic Map	15	p14	NCBI

Fermt2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955409	10,285,793 - 10,327,468 (+)	Ensembl
ChiLan1.0	NW_004955409	10,285,780 - 10,327,286 (+)	NCBI	ChiLan1.0	ChiLan1.0

FERMT2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	15	53,988,488 - 54,082,373 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	14	53,205,000 - 53,298,842 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	14	33,453,983 - 33,547,721 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	14	51,737,188 - 51,830,109 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	14	51,737,188 - 51,829,766 (-)	Ensembl			panPan2	panpan1.1

FERMT2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	8	29,083,538 - 29,135,915 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	8	29,084,531 - 29,133,391 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	8	28,829,003 - 28,907,889 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	8	29,250,020 - 29,326,046 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	8	29,250,010 - 29,395,871 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	8	28,924,206 - 29,004,100 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	8	28,996,473 - 29,076,651 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	8	29,325,136 - 29,405,152 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

FERMT2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	182,519,684 - 182,606,869 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	1	182,519,681 - 182,606,890 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	202,790,224 - 202,816,460 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

FERMT2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	24	29,954,706 - 30,053,012 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666053	18,220,669 - 18,321,976 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Fermt2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624731	16,168,207 - 16,246,778 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624731	16,168,179 - 16,247,747 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Fermt2
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	12	77,507,364 - 77,575,160 (+)	NCBI		Rrattus_CSIRO_v1

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005337972	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013364108	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021735066	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021735067	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040274145	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040274146	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040274147	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_078049917	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010003700	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JBPVTT010000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSTOT00000008577 ⟹ ENSSTOP00000007688

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936697	1,927,812 - 2,008,268 (+)	Ensembl

RefSeq Acc Id:

XM_005337972 ⟹ XP_005338029

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	76,153,793 - 76,234,113 (+)	NCBI
SpeTri2.0	NW_004936697	1,927,817 - 2,008,268 (+)	NCBI

Sequence:

show sequence

GCGGCCGCAGGGAGGGCGGCGGAGGGCGTGAGGCCGGCGAGCGGCCCTGGGCTGCTCTGCGCAA
CGGCGGAGGAGGGGCAGGCGCGCCCAGCCCGTGCTGGACTGAGCTGAGGGGCGGGGAGAGAGGG
GTGGAGCGCGGGGAGCCTGGCGAGGGGCAGCCACGACGGGACTCCATTAGCAGCTCGGGCCGGG
AGGCAGCGCTTCGCTGGCTGAGGAGCGTAAGGCGGACGCCGCCGCCCCGTTAGCCGCCGCCCCC
GCGCCTGCTGCCGCGCCAGCCCGGGTGAGGAGCGCGAGGACTGCAAGGAAGGAGCCATGGCTCT
GGACGGGATAAGGATGCCAGATGGCTGTTACGCGGATGGGACGTGGGAACTGAGTGTCCATGTG
ACAGACCTGAACCGCGATGTCACCCTGAGAGTGACCGGGGAGGTGCACATCGGAGGGGTGATGC
TTAAGTTGGTGGAAAAGCTCGATGTAAAAAAAGATTGGTCTGACCATGCTCTCTGGTGGGAAAA
GAAGAGAACTTGGCTGCTTAAGACACATTGGACCTTGGATAAGTATGGTATTCAGGCAGATGCC
AAGCTTCAGTTCACCCCCCAGCACAAACTGCTCCGCCTGCAACTTCCCAACATGAAGTATGTGA
AGGTGAAAGTGAATTTCTCTGATAGAGTCTTCAAAGCTGTTTCAGACATCTGTAAGACTTTTAA
TATACGACACCCTGAAGAACTTTCTCTCTTGAAAAAACCCAGAGATCCAACAAAGAAAAAAAAG
AAAAAGCTAGATGACCAATCTGAAGATGAGGCGCTTGAATTAGAGGGGCCTCTTATCACTCCTG
GATCAGGAAGTATATATTCAAGCCCAGGACTTTATAGTAAAACCATGACCCCCACTTATGATGC
TCATGATGGAAGCCCTTTGTCACCAACTTCTGCTTGGTTTGGTGACAGTGCTCTGTCAGAAGGC
AATCCTGGTATACTTGCTGTCAGTCAACCGATCACATCACCAGAAATCTTGGCAAAAATGTTCA
AGCCTCAAGCCCTTCTCGATAAAGCAAAAATCAACCAAGGGTGGCTTGATTCCTCAAGATCTCT
TATGGAACAAGATGTGAAGGAAAATGAGGCCTTGCTGCTTCGATTCAAGTATTACAGCTTTTTT
GATTTGAATCCAAAGTATGATGCAATCAGAATCAATCAGCTTTATGAGCAGGCTAAGTGGGCTA
TTCTCCTAGAAGAAATCGAATGCACAGAAGAAGAAATGATGATGTTTGCAGCCTTGCAGTATCA
TATCAACAAGCTGTCAATCATGACATCAGAGAATCATTTGAACAACAGTGACAAAGAAGTTGAT
GAAGTAGATGCTGCCCTCTCAGACTTGGAGATTACTTTGGAAGGGGGTAAAACATCAACAATTT
TGGGTGACATTACTTCCATTCCTGAACTTGCTGACTATATCAAAGTTTTCAAGCCAAAAAAGCT
GACTTTAAAAGGTTACAAGCAATATTGGTGCACTTTCAAAGATACATCTATTTCTTGCTATAAG
AGCAAAGAAGAATCCAGTGGCACACCTGCTCATCAGATGAACCTTCGAGGATGTGAAGTTACCC
CAGATGTAAACATTTCCGGCCAAAAATTTAACATTAAACTTCTGATTCCAGTCGCAGAGGGCAT
GAATGAAATCTGGCTTCGTTGTGACAATGAAAAACAGTATGCACACTGGATGGCAGCCTGCAGA
TTAGCCTCCAAAGGCAAGACCATGGCGGACAGTTCTTACAACTTAGAAGTTCAGAATATTCTTT
CCTTTCTGAAGATGCAGCATTTAAACCCAGATCCTCAATTAATACCAGAGCAGATTACAACTGA
TATAAATCCTGAATGTTTGGTGTCCCCACGGTATCTAAAAAAATATAAGAACAAACAGATAACA
GCAAGAATTTTGGAGGCCCATCAGAACGTAGCCCAGATGAGTCTGATTGAAGCTAAGATGAGAT
TCATTCAAGCTTGGCAGTCATTACCTGAATTTGGCATCACACACTTCATTGCAAGGTTCCAAGG
GGGCAAGAAAGAAGAGCTTATTGGAATTGCATACAACAGATTAATTAGGATGGATGCCAGCACA
GGAGATGCCATTAAAACATGGCGCTTCAGCAACATGAAGCAGTGGAATGTTAACTGGGAGATCA
AAATGGTCACCGTAGAGTTTGCAGATGAAGTCCGATTGTCCTTCATTTGTACTGAAGTAGATTG
CAAAGTGGTTCATGAATTTATTGGTGGCTACATATTTCTCTCAACACGTGCAAAAGACCAGAAT
GAGAGTTTAGATGAAGAGATGTTCTACAAACTTACTAGTGGTTGGGTGTGAATAGAAATACTAT
ATAATGAAACTCCATGGCCATAACAATATTTAACTTTAAAAGCTGTTGTTTGTTATATGCTGCT
TGATAAAGTAAGCTTGAAATTTATCATTTTATCATGAAAAACTTTTTTGCCTTACCAGACTGAT
TAATATGTGCACTAACAAGCACGACTAGTAATCTGCTAAAATGATACAATAAATGGACTATTGA
ATATGGCACACATTCCTTACGAAAGTGAAATAGTGGGCAAATCAGAAATAAACCATCAGTGATT
TAAGCAAGCCAAATTGTAAGAAATAAGCCATCTACTCTAAAGTTATGCAGGGCTTAACCTATAT
GAAGTCTATTTATCATGTTTAATGCATGTATTTTAATGTATTTTAATTTGATTTAATGTTTTAA
AATAACCTTCCAGTAGCCATTTAATCCCCCTCCCCAAATATAAAATCAGGCATACAAAAAATGC
CTGATATTTAATAATGTCATTATTTGACCTTGAAGGAAAATGCTGTTAGTCTGTTACGCTTTGT
TTTTGTCCTTGAATAAGCATGTGTGTATATTGTCTTGTGTTTTTATTTTTACACCATATTGTAT
TACTCTTATAGTATGCACCAGCATATTCACTATCTGCCTAAAATATGCAATTTTTGCATTACAA
TATGAAGTAAAGGTCTATGAAGTATAAATTTTGTGTAACTAATGTACAAACACAAATTTTATAA
AATTGTACAGTTTTTTTAAAAAACTTCACAACTAGAAATGGCTTAAATGTAGCATCCTTGCATT
AGTTAAATGCTTTTAAAAGATAATTAATATGCAGTTTTAATATCTGCTAAATTAAGAATGACTT
CATTTATGGTCATGATTTGCCACAATGTCCTTAACTCTTATGCCTGGACTAGGCAACGTTCTAG
TCTGTTGCGCTGTTACAATCTGCATTGGTGCTAGTCAGAAAATTCCTAGGTCACATAGCTCAAA
AGGGTGCCAGGGAGGGGTGGATTACCAGTATTGTCCAATAATCCATGGTTTAAAGACTGTATAA
ATGCATCTTATTTTAAATAAAAGCAAAACCTTTTATTTAATA

hide sequence

RefSeq Acc Id:

XM_013364108 ⟹ XP_013219562

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	76,153,816 - 76,234,113 (+)	NCBI
SpeTri2.0	NW_004936697	1,927,817 - 2,008,268 (+)	NCBI

Sequence:

show sequence

GCGGCCGCAGGGAGGGCGGCGGAGGGCGTGAGGCCGGCGAGCGGCCCTGGGCTGCTCTGCGCAA
CGGCGGAGGAGGGGCAGGCGCGCCCAGCCCGTGCTGGACTGAGCTGAGGGGCGGGGAGAGAGGG
GTGGAGCGCGGGGAGCCTGGCGAGGGGCAGCCACGACGGGACTCCATTAGCAGCTCGGGCCGGG
AGGCAGCGCTTCGCTGGCTGAGGAGCGTAAGGCGGACGCCGCCGCCCCGTTAGCCGCCGCCCCC
GCGCCTGCTGCCGCGCCAGCCCGGGTGAGGAGCGCGAGGACTGCAAGGAAGGAGCCATGGCTCT
GGACGGGATAAGGATGCCAGATGGCTGTTACGCGGATGGGACGTGGGAACTGAGTGTCCATGTG
ACAGACCTGAACCGCGATGTCACCCTGAGAGTGACCGGGGAGGTGCACATCGGAGGGGTGATGC
TTAAGTTGGTGGAAAAGCTCGATGTAAAAAAAGATTGGTCTGACCATGCTCTCTGGTGGGAAAA
GAAGAGAACTTGGCTGCTTAAGACACATTGGACCTTGGATAAGTATGGTATTCAGGCAGATGCC
AAGCTTCAGTTCACCCCCCAGCACAAACTGCTCCGCCTGCAACTTCCCAACATGAAGTATGTGA
AGGTGAAAGTGAATTTCTCTGATAGAGTCTTCAAAGCTGTTTCAGACATCTGTAAGACTTTTAA
TATACGACACCCTGAAGAACTTTCTCTCTTGAAAAAACCCAGAGATCCAACAAAGAAAAAAAAG
AAAAAGCTAGATGACCAATCTGAAGATGAGGCGCTTGAATTAGAGGGGCCTCTTATCACTCCTG
GATCAGGCACTGATGTTCTTTACATTGGCCCTCTGAAAGGAAGTATATATTCAAGCCCAGGACT
TTATAGTAAAACCATGACCCCCACTTATGATGCTCATGATGGAAGCCCTTTGTCACCAACTTCT
GCTTGGTTTGGTGACAGTGCTCTGTCAGAAGGCAATCCTGGTATACTTGCTGTCAGTCAACCGA
TCACATCACCAGAAATCTTGGCAAAAATGTTCAAGCCTCAAGCCCTTCTCGATAAAGCAAAAAT
CAACCAAGGGTGGCTTGATTCCTCAAGATCTCTTATGGAACAAGATGTGAAGGAAAATGAGGCC
TTGCTGCTTCGATTCAAGTATTACAGCTTTTTTGATTTGAATCCAAAGTATGATGCAATCAGAA
TCAATCAGCTTTATGAGCAGGCTAAGTGGGCTATTCTCCTAGAAGAAATCGAATGCACAGAAGA
AGAAATGATGATGTTTGCAGCCTTGCAGTATCATATCAACAAGCTGTCAATCATGACATCAGAG
AATCATTTGAACAACAGTGACAAAGAAGTTGATGAAGTAGATGCTGCCCTCTCAGACTTGGAGA
TTACTTTGGAAGGGGGTAAAACATCAACAATTTTGGGTGACATTACTTCCATTCCTGAACTTGC
TGACTATATCAAAGTTTTCAAGCCAAAAAAGCTGACTTTAAAAGGTTACAAGCAATATTGGTGC
ACTTTCAAAGATACATCTATTTCTTGCTATAAGAGCAAAGAAGAATCCAGTGGCACACCTGCTC
ATCAGATGAACCTTCGAGGATGTGAAGTTACCCCAGATGTAAACATTTCCGGCCAAAAATTTAA
CATTAAACTTCTGATTCCAGTCGCAGAGGGCATGAATGAAATCTGGCTTCGTTGTGACAATGAA
AAACAGTATGCACACTGGATGGCAGCCTGCAGATTAGCCTCCAAAGGCAAGACCATGGCGGACA
GTTCTTACAACTTAGAAGTTCAGAATATTCTTTCCTTTCTGAAGATGCAGCATTTAAACCCAGA
TCCTCAATTAATACCAGAGCAGATTACAACTGATATAAATCCTGAATGTTTGGTGTCCCCACGG
TATCTAAAAAAATATAAGAACAAACAGATAACAGCAAGAATTTTGGAGGCCCATCAGAACGTAG
CCCAGATGAGTCTGATTGAAGCTAAGATGAGATTCATTCAAGCTTGGCAGTCATTACCTGAATT
TGGCATCACACACTTCATTGCAAGGTTCCAAGGGGGCAAGAAAGAAGAGCTTATTGGAATTGCA
TACAACAGATTAATTAGGATGGATGCCAGCACAGGAGATGCCATTAAAACATGGCGCTTCAGCA
ACATGAAGCAGTGGAATGTTAACTGGGAGATCAAAATGGTCACCGTAGAGTTTGCAGATGAAGT
CCGATTGTCCTTCATTTGTACTGAAGTAGATTGCAAAGTGGTTCATGAATTTATTGGTGGCTAC
ATATTTCTCTCAACACGTGCAAAAGACCAGAATGAGAGTTTAGATGAAGAGATGTTCTACAAAC
TTACTAGTGGTTGGGTGTGAATAGAAATACTATATAATGAAACTCCATGGCCATAACAATATTT
AACTTTAAAAGCTGTTGTTTGTTATATGCTGCTTGATAAAGTAAGCTTGAAATTTATCATTTTA
TCATGAAAAACTTTTTTGCCTTACCAGACTGATTAATATGTGCACTAACAAGCACGACTAGTAA
TCTGCTAAAATGATACAATAAATGGACTATTGAATATGGCACACATTCCTTACGAAAGTGAAAT
AGTGGGCAAATCAGAAATAAACCATCAGTGATTTAAGCAAGCCAAATTGTAAGAAATAAGCCAT
CTACTCTAAAGTTATGCAGGGCTTAACCTATATGAAGTCTATTTATCATGTTTAATGCATGTAT
TTTAATGTATTTTAATTTGATTTAATGTTTTAAAATAACCTTCCAGTAGCCATTTAATCCCCCT
CCCCAAATATAAAATCAGGCATACAAAAAATGCCTGATATTTAATAATGTCATTATTTGACCTT
GAAGGAAAATGCTGTTAGTCTGTTACGCTTTGTTTTTGTCCTTGAATAAGCATGTGTGTATATT
GTCTTGTGTTTTTATTTTTACACCATATTGTATTACTCTTATAGTATGCACCAGCATATTCACT
ATCTGCCTAAAATATGCAATTTTTGCATTACAATATGAAGTAAAGGTCTATGAAGTATAAATTT
TGTGTAACTAATGTACAAACACAAATTTTATAAAATTGTACAGTTTTTTTAAAAAACTTCACAA
CTAGAAATGGCTTAAATGTAGCATCCTTGCATTAGTTAAATGCTTTTAAAAGATAATTAATATG
CAGTTTTAATATCTGCTAAATTAAGAATGACTTCATTTATGGTCATGATTTGCCACAATGTCCT
TAACTCTTATGCCTGGACTAGGCAACGTTCTAGTCTGTTGCGCTGTTACAATCTGCATTGGTGC
TAGTCAGAAAATTCCTAGGTCACATAGCTCAAAAGGGTGCCAGGGAGGGGTGGATTACCAGTAT
TGTCCAATAATCCATGGTTTAAAGACTGTATAAATGCATCTTATTTTAAATAAAAGCAAAACCT
TTTATTTAATA

hide sequence

RefSeq Acc Id:

XM_021735066 ⟹ XP_021590741

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	76,153,815 - 76,234,113 (+)	NCBI
SpeTri2.0	NW_004936697	1,927,817 - 2,008,266 (+)	NCBI

Sequence:

show sequence

GCGGCCGCAGGGAGGGCGGCGGAGGGCGTGAGGCCGGCGAGCGGCCCTGGGCTGCTCTGCGCAA
CGGCGGAGGAGGGGCAGGCGCGCCCAGCCCGTGCTGGACTGAGCTGAGGGGCGGGGAGAGAGGG
GTGGAGCGCGGGGAGCCTGGCGAGGGGCAGCCACGACGGGACTCCATTAGCAGCTCGGGCCGGG
AGGCAGCGCTTCGCTGGCTGAGGAGCGTAAGGCGGACGCCGCCGCCCCGTTAGCCGCCGCCCCC
GCGCCTGCTGCCGCGCCAGCCCGGGTGAGGAGCGCGAGGACTGCAAGGAAGGAGCCATGGCTCT
GGACGGGATAAGGATGCCAGATGGCTGTTACGCGGATGGGACGTGGGAACTGAGTGTCCATGTG
ACAGACCTGAACCGCGATGTCACCCTGAGAGTGACCGGGGAGGTGCACATCGGAGGGGTGATGC
TTAAGTTGGTGGAAAAGCTCGATGTAAAAAAAGATTGGTCTGACCATGCTCTCTGGTGGGAAAA
GAAGAGAACTTGGCTGCTTAAGACACATTGGACCTTGGATAAGTATGGTATTCAGGCAGATGCC
AAGCTTCAGTTCACCCCCCAGCACAAACTGCTCCGCCTGCAACTTCCCAACATGAAGTATGTGA
AGGTGAAAGTGAATTTCTCTGATAGAGTCTTCAAAGCTGTTTCAGACATCTGTAAGACTTTTAA
TATACGACACCCTGAAGAACTTTCTCTCTTGAAAAAACCCAGAGATCCAACAAAGAAAAAAAAG
AAAAAGCTAGATGACCAATCTGAAGATGAGGCGCTTGAATTAGAGGGGCCTCTTATCACTCCTG
GATCAGGCACTGATGTTCTTTACATTGGCCCTCTGAAAGGAAGTATATATTCAAGCCCAGGACT
TTATAGTAAAACCATGACCCCCACTTATGATGCTCATGATGGAAGCCCTTTGTCACCAACTTCT
GCTTGGTTTGGTGACAGTGCTCTGTCAGAAGGCAATCCTGGTATACTTGCTGTCAGTCAACCGA
TCACATCACCAGAAATCTTGGCAAAAATGTTCAAGCCTCAAGCCCTTCTCGATAAAGCAAAAAT
CAACCAAGGGTGGCTTGATTCCTCAAGATCTCTTATGGAACAAGATGTGAAGGAAAATGAGGCC
TTGCTGCTTCGATTCAAGTATTACAGCTTTTTTGATTTGAATCCAAAGTATGATGCAATCAGAA
TCAATCAGCTTTATGAGCAGGCTAAGTGGGCTATTCTCCTAGAAGAAATCGAATGCACAGAAGA
AGAAATGATGATGTTTGCAGCCTTGCAGTATCATATCAACAAGCTGTCAATCATGACATCAGAG
AATCATTTGAACAACAGTGACAAAGAAGTTGATGAAGTAGATGCTGCCCTCTCAGACTTGGAGA
TTACTTTGGAAGGGGGTAAAACATCAACAATTTTGGGTGACATTACTTCCATTCCTGAACTTGC
TGACTATATCAAAGTTTTCAAGCCAAAAAAGCTGACTTTAAAAGGTTACAAGCAATATTGGTGC
ACTTTCAAAGATACATCTATTTCTTGCTATAAGAGCAAAGAAGAATCCAGTGGCACACCTGCTC
ATCAGATGAACCTTCGAGGATGTGAAGTTACCCCAGATGTAAACATTTCCGGCCAAAAATTTAA
CATTAAACTTCTGATTCCAGTCGCAGAGGGCATGAATGAAATCTGGCTTCGTTGTGACAATGAA
AAACAGTATGCACACTGGATGGCAGCCTGCAGATTAGCCTCCAAAGGCAAGACCATGGCGGACA
GTTCTTACAACTTAGAAGTTCAGAATATTCTTTCCTTTCTGAAGATGCAGCATTTAAACCCAGA
TCCTCAATTAATACCAGAGCAGATTACAACTGATATAAATCCTGAATGTTTGGTGTCCCCACGG
TATCTAAAAAAATATAAGAACAAACAGCCAGGCTATGTAAGAGATTTGATAACAGCAAGAATTT
TGGAGGCCCATCAGAACGTAGCCCAGATGAGTCTGATTGAAGCTAAGATGAGATTCATTCAAGC
TTGGCAGTCATTACCTGAATTTGGCATCACACACTTCATTGCAAGGTTCCAAGGGGGCAAGAAA
GAAGAGCTTATTGGAATTGCATACAACAGATTAATTAGGATGGATGCCAGCACAGGAGATGCCA
TTAAAACATGGCGCTTCAGCAACATGAAGCAGTGGAATGTTAACTGGGAGATCAAAATGGTCAC
CGTAGAGTTTGCAGATGAAGTCCGATTGTCCTTCATTTGTACTGAAGTAGATTGCAAAGTGGTT
CATGAATTTATTGGTGGCTACATATTTCTCTCAACACGTGCAAAAGACCAGAATGAGAGTTTAG
ATGAAGAGATGTTCTACAAACTTACTAGTGGTTGGGTGTGAATAGAAATACTATATAATGAAAC
TCCATGGCCATAACAATATTTAACTTTAAAAGCTGTTGTTTGTTATATGCTGCTTGATAAAGTA
AGCTTGAAATTTATCATTTTATCATGAAAAACTTTTTTGCCTTACCAGACTGATTAATATGTGC
ACTAACAAGCACGACTAGTAATCTGCTAAAATGATACAATAAATGGACTATTGAATATGGCACA
CATTCCTTACGAAAGTGAAATAGTGGGCAAATCAGAAATAAACCATCAGTGATTTAAGCAAGCC
AAATTGTAAGAAATAAGCCATCTACTCTAAAGTTATGCAGGGCTTAACCTATATGAAGTCTATT
TATCATGTTTAATGCATGTATTTTAATGTATTTTAATTTGATTTAATGTTTTAAAATAACCTTC
CAGTAGCCATTTAATCCCCCTCCCCAAATATAAAATCAGGCATACAAAAAATGCCTGATATTTA
ATAATGTCATTATTTGACCTTGAAGGAAAATGCTGTTAGTCTGTTACGCTTTGTTTTTGTCCTT
GAATAAGCATGTGTGTATATTGTCTTGTGTTTTTATTTTTACACCATATTGTATTACTCTTATA
GTATGCACCAGCATATTCACTATCTGCCTAAAATATGCAATTTTTGCATTACAATATGAAGTAA
AGGTCTATGAAGTATAAATTTTGTGTAACTAATGTACAAACACAAATTTTATAAAATTGTACAG
TTTTTTTAAAAAACTTCACAACTAGAAATGGCTTAAATGTAGCATCCTTGCATTAGTTAAATGC
TTTTAAAAGATAATTAATATGCAGTTTTAATATCTGCTAAATTAAGAATGACTTCATTTATGGT
CATGATTTGCCACAATGTCCTTAACTCTTATGCCTGGACTAGGCAACGTTCTAGTCTGTTGCGC
TGTTACAATCTGCATTGGTGCTAGTCAGAAAATTCCTAGGTCACATAGCTCAAAAGGGTGCCAG
GGAGGGGTGGATTACCAGTATTGTCCAATAATCCATGGTTTAAAGACTGTATAAATGCATCTTA
TTTTAAATAAAAGCAAAACCTTTTATTTAA

hide sequence

RefSeq Acc Id:

XM_021735067 ⟹ XP_021590742

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	76,153,816 - 76,234,113 (+)	NCBI
SpeTri2.0	NW_004936697	1,927,817 - 2,008,268 (+)	NCBI

Sequence:

show sequence

GCGGCCGCAGGGAGGGCGGCGGAGGGCGTGAGGCCGGCGAGCGGCCCTGGGCTGCTCTGCGCAA
CGGCGGAGGAGGGGCAGGCGCGCCCAGCCCGTGCTGGACTGAGCTGAGGGGCGGGGAGAGAGGG
GTGGAGCGCGGGGAGCCTGGCGAGGGGCAGCCACGACGGGACTCCATTAGCAGCTCGGGCCGGG
AGGCAGCGCTTCGCTGGCTGAGGAGCGTAAGGCGGACGCCGCCGCCCCGTTAGCCGCCGCCCCC
GCGCCTGCTGCCGCGCCAGCCCGGGTGAGGAGCGCGAGGACTGCAAGGAAGGAGCCATGGCTCT
GGACGGGATAAGGATGCCAGATGGCTGTTACGCGGATGGGACGTGGGAACTGAGTGTCCATGTG
ACAGACCTGAACCGCGATGTCACCCTGAGAGTGACCGGGGAGGTGCACATCGGAGGGGTGATGC
TTAAGTTGGTGGAAAAGCTCGATGTAAAAAAAGATTGGTCTGACCATGCTCTCTGGTGGGAAAA
GAAGAGAACTTGGCTGCTTAAGACACATTGGACCTTGGATAAGTATGGTATTCAGGCAGATGCC
AAGCTTCAGTTCACCCCCCAGCACAAACTGCTCCGCCTGCAACTTCCCAACATGAAGTATGTGA
AGGTGAAAGTGAATTTCTCTGATAGAGTCTTCAAAGCTGTTTCAGACATCTGTAAGACTTTTAA
TATACGACACCCTGAAGAACTTTCTCTCTTGAAAAAACCCAGAGATCCAACAAAGAAAAAAAAG
AAAAAGCTAGATGACCAATCTGAAGATGAGGCGCTTGAATTAGAGGGGCCTCTTATCACTCCTG
GATCAGGAAGTATATATTCAAGCCCAGGACTTTATAGTAAAACCATGACCCCCACTTATGATGC
TCATGATGGAAGCCCTTTGTCACCAACTTCTGCTTGGTTTGGTGACAGTGCTCTGTCAGAAGGC
AATCCTGGTATACTTGCTGTCAGTCAACCGATCACATCACCAGAAATCTTGGCAAAAATGTTCA
AGCCTCAAGCCCTTCTCGATAAAGCAAAAATCAACCAAGGGTGGCTTGATTCCTCAAGATCTCT
TATGGAACAAGATGTGAAGGAAAATGAGGCCTTGCTGCTTCGATTCAAGTATTACAGCTTTTTT
GATTTGAATCCAAAGTATGATGCAATCAGAATCAATCAGCTTTATGAGCAGGCTAAGTGGGCTA
TTCTCCTAGAAGAAATCGAATGCACAGAAGAAGAAATGATGATGTTTGCAGCCTTGCAGTATCA
TATCAACAAGCTGTCAATCATGACATCAGAGAATCATTTGAACAACAGTGACAAAGAAGTTGAT
GAAGTAGATGCTGCCCTCTCAGACTTGGAGATTACTTTGGAAGGGGGTAAAACATCAACAATTT
TGGGTGACATTACTTCCATTCCTGAACTTGCTGACTATATCAAAGTTTTCAAGCCAAAAAAGCT
GACTTTAAAAGGTTACAAGCAATATTGGTGCACTTTCAAAGATACATCTATTTCTTGCTATAAG
AGCAAAGAAGAATCCAGTGGCACACCTGCTCATCAGATGAACCTTCGAGGATGTGAAGTTACCC
CAGATGTAAACATTTCCGGCCAAAAATTTAACATTAAACTTCTGATTCCAGTCGCAGAGGGCAT
GAATGAAATCTGGCTTCGTTGTGACAATGAAAAACAGTATGCACACTGGATGGCAGCCTGCAGA
TTAGCCTCCAAAGGCAAGACCATGGCGGACAGTTCTTACAACTTAGAAGTTCAGAATATTCTTT
CCTTTCTGAAGATGCAGCATTTAAACCCAGATCCTCAATTAATACCAGAGCAGATTACAACTGA
TATAAATCCTGAATGTTTGGTGTCCCCACGGTATCTAAAAAAATATAAGAACAAACAGCCAGGC
TATGTAAGAGATTTGATAACAGCAAGAATTTTGGAGGCCCATCAGAACGTAGCCCAGATGAGTC
TGATTGAAGCTAAGATGAGATTCATTCAAGCTTGGCAGTCATTACCTGAATTTGGCATCACACA
CTTCATTGCAAGGTTCCAAGGGGGCAAGAAAGAAGAGCTTATTGGAATTGCATACAACAGATTA
ATTAGGATGGATGCCAGCACAGGAGATGCCATTAAAACATGGCGCTTCAGCAACATGAAGCAGT
GGAATGTTAACTGGGAGATCAAAATGGTCACCGTAGAGTTTGCAGATGAAGTCCGATTGTCCTT
CATTTGTACTGAAGTAGATTGCAAAGTGGTTCATGAATTTATTGGTGGCTACATATTTCTCTCA
ACACGTGCAAAAGACCAGAATGAGAGTTTAGATGAAGAGATGTTCTACAAACTTACTAGTGGTT
GGGTGTGAATAGAAATACTATATAATGAAACTCCATGGCCATAACAATATTTAACTTTAAAAGC
TGTTGTTTGTTATATGCTGCTTGATAAAGTAAGCTTGAAATTTATCATTTTATCATGAAAAACT
TTTTTGCCTTACCAGACTGATTAATATGTGCACTAACAAGCACGACTAGTAATCTGCTAAAATG
ATACAATAAATGGACTATTGAATATGGCACACATTCCTTACGAAAGTGAAATAGTGGGCAAATC
AGAAATAAACCATCAGTGATTTAAGCAAGCCAAATTGTAAGAAATAAGCCATCTACTCTAAAGT
TATGCAGGGCTTAACCTATATGAAGTCTATTTATCATGTTTAATGCATGTATTTTAATGTATTT
TAATTTGATTTAATGTTTTAAAATAACCTTCCAGTAGCCATTTAATCCCCCTCCCCAAATATAA
AATCAGGCATACAAAAAATGCCTGATATTTAATAATGTCATTATTTGACCTTGAAGGAAAATGC
TGTTAGTCTGTTACGCTTTGTTTTTGTCCTTGAATAAGCATGTGTGTATATTGTCTTGTGTTTT
TATTTTTACACCATATTGTATTACTCTTATAGTATGCACCAGCATATTCACTATCTGCCTAAAA
TATGCAATTTTTGCATTACAATATGAAGTAAAGGTCTATGAAGTATAAATTTTGTGTAACTAAT
GTACAAACACAAATTTTATAAAATTGTACAGTTTTTTTAAAAAACTTCACAACTAGAAATGGCT
TAAATGTAGCATCCTTGCATTAGTTAAATGCTTTTAAAAGATAATTAATATGCAGTTTTAATAT
CTGCTAAATTAAGAATGACTTCATTTATGGTCATGATTTGCCACAATGTCCTTAACTCTTATGC
CTGGACTAGGCAACGTTCTAGTCTGTTGCGCTGTTACAATCTGCATTGGTGCTAGTCAGAAAAT
TCCTAGGTCACATAGCTCAAAAGGGTGCCAGGGAGGGGTGGATTACCAGTATTGTCCAATAATC
CATGGTTTAAAGACTGTATAAATGCATCTTATTTTAAATAAAAGCAAAACCTTTTATTTAATA

hide sequence

RefSeq Acc Id:

XM_040274145 ⟹ XP_040130079

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	76,153,815 - 76,234,113 (+)	NCBI

RefSeq Acc Id:

XM_040274146 ⟹ XP_040130080

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	76,153,816 - 76,234,113 (+)	NCBI

RefSeq Acc Id:

XM_040274147 ⟹ XP_040130081

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	76,153,835 - 76,234,113 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_005338029	(Get FASTA)	NCBI Sequence Viewer
	XP_013219562	(Get FASTA)	NCBI Sequence Viewer
	XP_021590741	(Get FASTA)	NCBI Sequence Viewer
	XP_021590742	(Get FASTA)	NCBI Sequence Viewer
	XP_077906043	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000007688.3
	ENSSTOP00015017650
GenBank Protein	KAG3261422	(Get FASTA)	NCBI Sequence Viewer
	KAG3261423	(Get FASTA)	NCBI Sequence Viewer
	KAG3261424	(Get FASTA)	NCBI Sequence Viewer
	KAG3261425	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

XP_013219562 ⟸ XM_013364108

- Peptide Label:

isoform X4

- Sequence:

show sequence

MALDGIRMPDGCYADGTWELSVHVTDLNRDVTLRVTGEVHIGGVMLKLVEKLDVKKDWSDHALW
WEKKRTWLLKTHWTLDKYGIQADAKLQFTPQHKLLRLQLPNMKYVKVKVNFSDRVFKAVSDICK
TFNIRHPEELSLLKKPRDPTKKKKKKLDDQSEDEALELEGPLITPGSGTDVLYIGPLKGSIYSS
PGLYSKTMTPTYDAHDGSPLSPTSAWFGDSALSEGNPGILAVSQPITSPEILAKMFKPQALLDK
AKINQGWLDSSRSLMEQDVKENEALLLRFKYYSFFDLNPKYDAIRINQLYEQAKWAILLEEIEC
TEEEMMMFAALQYHINKLSIMTSENHLNNSDKEVDEVDAALSDLEITLEGGKTSTILGDITSIP
ELADYIKVFKPKKLTLKGYKQYWCTFKDTSISCYKSKEESSGTPAHQMNLRGCEVTPDVNISGQ
KFNIKLLIPVAEGMNEIWLRCDNEKQYAHWMAACRLASKGKTMADSSYNLEVQNILSFLKMQHL
NPDPQLIPEQITTDINPECLVSPRYLKKYKNKQITARILEAHQNVAQMSLIEAKMRFIQAWQSL
PEFGITHFIARFQGGKKEELIGIAYNRLIRMDASTGDAIKTWRFSNMKQWNVNWEIKMVTVEFA
DEVRLSFICTEVDCKVVHEFIGGYIFLSTRAKDQNESLDEEMFYKLTSGWV

hide sequence

RefSeq Acc Id:	XP_005338029 ⟸ XM_005337972
- Peptide Label:	isoform X6
- UniProtKB:	I3MBW2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MALDGIRMPDGCYADGTWELSVHVTDLNRDVTLRVTGEVHIGGVMLKLVEKLDVKKDWSDHALW WEKKRTWLLKTHWTLDKYGIQADAKLQFTPQHKLLRLQLPNMKYVKVKVNFSDRVFKAVSDICK TFNIRHPEELSLLKKPRDPTKKKKKKLDDQSEDEALELEGPLITPGSGSIYSSPGLYSKTMTPT YDAHDGSPLSPTSAWFGDSALSEGNPGILAVSQPITSPEILAKMFKPQALLDKAKINQGWLDSS RSLMEQDVKENEALLLRFKYYSFFDLNPKYDAIRINQLYEQAKWAILLEEIECTEEEMMMFAAL QYHINKLSIMTSENHLNNSDKEVDEVDAALSDLEITLEGGKTSTILGDITSIPELADYIKVFKP KKLTLKGYKQYWCTFKDTSISCYKSKEESSGTPAHQMNLRGCEVTPDVNISGQKFNIKLLIPVA EGMNEIWLRCDNEKQYAHWMAACRLASKGKTMADSSYNLEVQNILSFLKMQHLNPDPQLIPEQI TTDINPECLVSPRYLKKYKNKQITARILEAHQNVAQMSLIEAKMRFIQAWQSLPEFGITHFIAR FQGGKKEELIGIAYNRLIRMDASTGDAIKTWRFSNMKQWNVNWEIKMVTVEFADEVRLSFICTE VDCKVVHEFIGGYIFLSTRAKDQNESLDEEMFYKLTSGWV hide sequence

RefSeq Acc Id:

XP_021590742 ⟸ XM_021735067

- Peptide Label:

isoform X5

- Sequence:

show sequence

MALDGIRMPDGCYADGTWELSVHVTDLNRDVTLRVTGEVHIGGVMLKLVEKLDVKKDWSDHALW
WEKKRTWLLKTHWTLDKYGIQADAKLQFTPQHKLLRLQLPNMKYVKVKVNFSDRVFKAVSDICK
TFNIRHPEELSLLKKPRDPTKKKKKKLDDQSEDEALELEGPLITPGSGSIYSSPGLYSKTMTPT
YDAHDGSPLSPTSAWFGDSALSEGNPGILAVSQPITSPEILAKMFKPQALLDKAKINQGWLDSS
RSLMEQDVKENEALLLRFKYYSFFDLNPKYDAIRINQLYEQAKWAILLEEIECTEEEMMMFAAL
QYHINKLSIMTSENHLNNSDKEVDEVDAALSDLEITLEGGKTSTILGDITSIPELADYIKVFKP
KKLTLKGYKQYWCTFKDTSISCYKSKEESSGTPAHQMNLRGCEVTPDVNISGQKFNIKLLIPVA
EGMNEIWLRCDNEKQYAHWMAACRLASKGKTMADSSYNLEVQNILSFLKMQHLNPDPQLIPEQI
TTDINPECLVSPRYLKKYKNKQPGYVRDLITARILEAHQNVAQMSLIEAKMRFIQAWQSLPEFG
ITHFIARFQGGKKEELIGIAYNRLIRMDASTGDAIKTWRFSNMKQWNVNWEIKMVTVEFADEVR
LSFICTEVDCKVVHEFIGGYIFLSTRAKDQNESLDEEMFYKLTSGWV

hide sequence

RefSeq Acc Id:

XP_021590741 ⟸ XM_021735066

- Peptide Label:

isoform X2

- Sequence:

show sequence

MALDGIRMPDGCYADGTWELSVHVTDLNRDVTLRVTGEVHIGGVMLKLVEKLDVKKDWSDHALW
WEKKRTWLLKTHWTLDKYGIQADAKLQFTPQHKLLRLQLPNMKYVKVKVNFSDRVFKAVSDICK
TFNIRHPEELSLLKKPRDPTKKKKKKLDDQSEDEALELEGPLITPGSGTDVLYIGPLKGSIYSS
PGLYSKTMTPTYDAHDGSPLSPTSAWFGDSALSEGNPGILAVSQPITSPEILAKMFKPQALLDK
AKINQGWLDSSRSLMEQDVKENEALLLRFKYYSFFDLNPKYDAIRINQLYEQAKWAILLEEIEC
TEEEMMMFAALQYHINKLSIMTSENHLNNSDKEVDEVDAALSDLEITLEGGKTSTILGDITSIP
ELADYIKVFKPKKLTLKGYKQYWCTFKDTSISCYKSKEESSGTPAHQMNLRGCEVTPDVNISGQ
KFNIKLLIPVAEGMNEIWLRCDNEKQYAHWMAACRLASKGKTMADSSYNLEVQNILSFLKMQHL
NPDPQLIPEQITTDINPECLVSPRYLKKYKNKQPGYVRDLITARILEAHQNVAQMSLIEAKMRF
IQAWQSLPEFGITHFIARFQGGKKEELIGIAYNRLIRMDASTGDAIKTWRFSNMKQWNVNWEIK
MVTVEFADEVRLSFICTEVDCKVVHEFIGGYIFLSTRAKDQNESLDEEMFYKLTSGWV

hide sequence

RefSeq Acc Id:	XP_040130079 ⟸ XM_040274145
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_040130080 ⟸ XM_040274146
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_040130081 ⟸ XM_040274147
- Peptide Label:	isoform X7

Ensembl Acc Id:

ENSSTOP00000007688 ⟸ ENSSTOT00000008577

Protein Domains

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000008563	Ensembl, UniProtKB/TrEMBL
	ENSSTOG00015014407	ENTREZGENE
Ensembl Transcript	ENSSTOT00000008577.3	UniProtKB/TrEMBL
Gene3D-CATH	2.30.29.30	UniProtKB/TrEMBL
	Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1	UniProtKB/TrEMBL
InterPro	Band_41_domain	UniProtKB/TrEMBL
	FERM_2	UniProtKB/TrEMBL
	FERM_central	UniProtKB/TrEMBL
	Kindlin/fermitin	UniProtKB/TrEMBL
	Kindlin_2_N	UniProtKB/TrEMBL
	PH-like_dom_sf	UniProtKB/TrEMBL
	PH_domain	UniProtKB/TrEMBL
	PH_Kindlin/fermitin	UniProtKB/TrEMBL
KEGG Report	iti:101968773	UniProtKB/TrEMBL
NCBI Gene	Fermt2	ENTREZGENE
PANTHER	FERMITIN FAMILY HOMOLOG 2	UniProtKB/TrEMBL
	PTHR16160	UniProtKB/TrEMBL
Pfam	FERM_M	UniProtKB/TrEMBL
	Kindlin_2_N	UniProtKB/TrEMBL
	PF00169	UniProtKB/TrEMBL
PROSITE	PH_DOMAIN	UniProtKB/TrEMBL
SMART	B41	UniProtKB/TrEMBL
	SM00233	UniProtKB/TrEMBL
Superfamily-SCOP	PH domain-like	UniProtKB/TrEMBL
	SSF47031	UniProtKB/TrEMBL
UniProt	I3MBW2	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2021-02-16	Fermt2	FERM domain containing kindlin 2	Fermt2	fermitin family member 2	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - CTD

RGD Manual Annotations

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Imported Disease Annotations - CTD

RGD Manual Annotations