D4Got136 Marker Search Result - Rat Genome Database

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Marker: D4Got136

Symbol: D4Got136
Previously known as: oxsts2011; OT80.30; 
RGD ID: 60422
Expected Size: 142 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.24157,232,171 - 157,232,313 (+)MAPPERmRatBN7.2
Rnor_6.04156,945,430 - 156,945,571NCBIRnor6.0
Rnor_5.04223,964,554 - 223,964,695UniSTSRnor5.0
RGSC_v3.44160,528,306 - 160,528,447UniSTSRGSC3.4
RGSC_v3.44160,528,306 - 160,528,447RGDRGSC3.4
RGSC_v3.14160,773,242 - 160,773,383RGD
Celera4145,973,618 - 145,973,765UniSTS
RH 3.4 Map41003.8UniSTS
RH 3.4 Map41003.8RGD
Cytogenetic Map4q42UniSTS
Is Marker For: Strains:   DA.E3-(D4Wox49-D4Got136)/Rhd   DA.PVG.1AV1-(D4Rat62-D4Got136)/Kiru   DA.PVG.1AV1-(D4Got128-D4Got136)  
QTLs:   Oia7  
Genes:   1700013D24Rikl  




#
Reference Title
Reference Citation
1. Data downloaded from Wellcome Trust, University of Oxford Data downloaded from Wellcome Trust, University of Oxford
2. High-density rat radiation hybrid maps containing over 24,000 SSLPs, genes, and ESTs provide a direct link to the rat genome sequence. Kwitek AE, etal., Genome Res. 2004 Apr;14(4):750-7
3. UniSTS Pipeline RGD automated pipelines


 
Forward Primer CGATCAATGAAAGTTGCCCT
Reverse Primer AAGCTGTGTGAGAGGTAGAGGTC
 


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
13079161700013D24RiklRIKEN cDNA 1700013D24 gene like4157157264157241805Rat
GenBank Nucleotide AU025444 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


1 to 10 of 40 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
6478754Anxrr43Anxiety related response QTL 430.14035locomotor behavior trait (VT:0001392)distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)4144639524182687754Rat
724558Plsm2Polydactyly-luxate syndrome (PLS) morphotypes QTL 20.0003hindlimb integrity trait (VT:0010563)hind foot phalanges count (CMO:0001949)4132422778177422778Rat
1582237Kidm34Kidney mass QTL 3440.0001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)4148090542168069246Rat
61446Coreg2Compensatory renal growth QTL 23.5kidney mass (VT:0002707)compensatory renal growth score (CMO:0001894)4148423102157580971Rat
6478693Anxrr32Anxiety related response QTL 320.00092locomotor behavior trait (VT:0001392)measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)4144639524182687754Rat
10755501Bp390Blood pressure QTL 3902.5arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)426775591168368347Rat
631683Bp116Blood pressure QTL 1160.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)4124303370169303370Rat
61451Ciaa4CIA Autoantibody QTL 43.1blood autoantibody amount (VT:0003725)calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)4126395976167139601Rat
1331802Srn5Serum renin concentration QTL 53.045renin activity (VT:0005581)plasma renin activity level (CMO:0000116)4119428175157578333Rat
1331738Bp209Blood pressure QTL 2092.979arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)4138503169179293946Rat

1 to 10 of 40 rows


Database
Acc Id
Source(s)
NCBI Gene 362433 UniSTS
  408135 UniSTS