AU049560 Marker Search Result - Rat Genome Database

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Marker: AU049560

Symbol: AU049560
Previously known as:
RGD ID: 5090117
Expected Size: 285 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8453,228,497 - 53,228,782 (+)Marker Load Pipeline
mRatBN7.2452,262,878 - 52,263,163 (+)MAPPERmRatBN7.2
Rnor_6.0450,804,890 - 50,805,174NCBIRnor6.0
Rnor_5.0450,584,618 - 50,584,902UniSTSRnor5.0
RGSC_v3.4450,159,492 - 50,159,776UniSTSRGSC3.4
Celera447,454,133 - 47,454,417UniSTS
Cytogenetic Map4q22UniSTS
Is Marker For: Genes:   Cadps2  




#
Reference Title
Reference Citation
1. UniSTS Pipeline RGD automated pipelines


 
Forward Primer CACACGGATACAGGACAGGA
Reverse Primer AAGGGTGGTTCTGCCCAT
 


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1559440Cadps2calcium dependent secretion activator 245178041552309641Rat

GenBank Nucleotide AU049560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


1 to 10 of 42 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2302371Stl22Serum triglyceride level QTL 225.15blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)4521829457114705Rat
2303585Bw86Body weight QTL 864body mass (VT:0001259)body weight (CMO:0000012)41467806559678065Rat
1358352Srcrt3Stress Responsive Cort QTL 32.29blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)438465774146803430Rat
61445Strs3Sensitivity to stroke QTL 33cerebrum integrity trait (VT:0010549)post-insult time to onset of cerebrovascular lesion (CMO:0002343)44043338885433388Rat
6893678Bw108Body weight QTL 1082.60.006body mass (VT:0001259)body weight (CMO:0000012)44345797688457976Rat
8552906Pigfal3Plasma insulin-like growth factor 1 level QTL 3blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)41008408955084089Rat
10755501Bp390Blood pressure QTL 3902.5arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)426775591168368347Rat
1331807Rf31Renal function QTL 312.988urine potassium amount (VT:0010539)urine potassium level (CMO:0000128)43952426474726312Rat
6478766Anxrr47Anxiety related response QTL 470.09637locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)41008408955084089Rat
8552782Vie1Viral induced encephalitis QTL 126.4brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)43443048482490359Rat

1 to 10 of 42 rows


Database
Acc Id
Source(s)
NCBI Gene 312166 UniSTS