RH140348 Marker Search Result - Rat Genome Database

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Marker: RH140348

Symbol: RH140348
Previously known as: AI101713; 
RGD ID: 5078446
Expected Size: 120 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21249,080,890 - 249,081,010 (+)MAPPERmRatBN7.2
Rnor_6.01269,966,053 - 269,966,172NCBIRnor6.0
Rnor_5.01277,405,225 - 277,405,344UniSTSRnor5.0
RGSC_v3.41255,760,113 - 255,760,232UniSTSRGSC3.4
Celera1244,821,099 - 244,821,218UniSTS
RH 3.4 Map11648.3UniSTS
Cytogenetic Map1q55UniSTS
Is Marker For: Genes:   Sorcs1  




#
Reference Title
Reference Citation
1. UniSTS Pipeline RGD automated pipelines


 
Forward Primer ATGACATTCGGAGTGGTTTAATTT
Reverse Primer TGCCTATTGAACCCATACCTTAAT
 


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1305910Sorcs1sortilin-related VPS10 domain containing receptor 11249080662249594520Rat
RefSeq Transcripts XM_003753421.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


1 to 10 of 47 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1354580Scort1Serum corticosterone level QTL 13.4blood corticosterone amount (VT:0005345)blood corticosterone level (CMO:0001172)1156677124256448636Rat
634313Niddm43Non-insulin dependent diabetes mellitus QTL 43blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1199050459259647894Rat
1549910Bw54Body weight QTL 540.05body mass (VT:0001259)body weight (CMO:0000012)1214647894259647894Rat
1578778Pur4Proteinuria QTL 43.30.003urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)1150700247252085048Rat
1354646Kidm18Kidney mass QTL 185.7kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1151162512256448636Rat
70211Niddm24Non-insulin dependent diabetes mellitus QTL 243.79blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1214647894259647894Rat
1357399Bw45Body weight QTL 453.05body mass (VT:0001259)body mass index (BMI) (CMO:0000105)1206329708251329708Rat
724552Glom2Glomerulus QTL 23.30.0001kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli directly contacting the kidney surface (CMO:0001001)1222363780260522016Rat
631690Scl5Serum cholesterol level QTL 52.1blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)1236125214260522016Rat
1354652Kidm20Kidney mass QTL 204.3kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1177227632256448636Rat

1 to 10 of 47 rows


Database
Acc Id
Source(s)
NCBI Gene 309533 UniSTS