Rf56 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Rf56 (Renal function QTL 56) Rattus norvegicus

Symbol: Rf56
Name: Renal function QTL 56
RGD ID: 1598839
Trait: renal blood flow trait   (VT:2000006)    
Measurement Type: ratio of change in renal blood flow to change in renal perfusion pressure   (CMO:0001239)    
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.01266,793,821 - 279,986,079RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01274,224,224 - 287,349,830RGDRnor5.0
RGSC_v3.41252,340,389 - 265,343,617RGDRGSC3.4
RGSC_v3.11252,604,962 - 265,554,662RGD
Cross Type: Not Available
Strains Crossed: FHH.FHH.1BN-(D1Mgh13-D1Rat89)/Mcwi 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain

References

References - curated
1. Lopez B, etal., Am J Physiol Renal Physiol. 2006 May;290(5):F1213-21. Epub 2005 Nov 22.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
61847Gpamglycerol-3-phosphate acyltransferase, mitochondrial1275843823275906880Rat
3128Mxi1MAX interactor 1, dimerization protein1274030748274090071Rat
3360Pnlippancreatic lipase1279798187279811372Rat
3780SlkSTE20-like kinase1267359761267415735Rat
2043Add3adducin 31273854195273961982Rat
70952Gsto1glutathione S-transferase omega 11267607437267617387Rat
62006Smc3structural maintenance of chromosomes 31274310120274352856Rat
2681Gfra1GDNF family receptor alpha 11279203046279572789Rat
631426Atp5mkATP synthase membrane subunit k1266859961266866753Rat
621853Gucy2gguanylate cyclase 2G1276187243276228574Rat
621274Xpnpep1X-prolyl aminopeptidase 11273708217273758247Rat
69402Acsl5acyl-CoA synthetase long-chain family member 51276240703276290012Rat
620944Casp7caspase 71277190557277242779Rat
2911Inainternexin neuronal intermediate filament protein, alpha1266782835266794389Rat
2915Ins1insulin 11272799784272800351Rat
1304933Pdcd11programmed cell death 111266866931266908042Rat
1302979Habp2hyaluronan binding protein 21277068715277104567Rat
620816Pdcd4programmed cell death 41274616625274648204Rat
620792Pnliprp1pancreatic lipase-related protein 11279867034279882663Rat
620793Pnliprp2pancreatic lipase related protein 21279896973279927600Rat
620854Dusp5dual specificity phosphatase 51274245184274258595Rat
1304657Zdhhc6zinc finger DHHC-type palmitoyltransferase 61276291411276309633Rat
621490Vti1avesicle transport through interaction with t-SNAREs 1A1276310072276508635Rat
1305531Hspa12aheat shock protein family A (Hsp70) member 12A1279946809280104366Rat
1305637Stn1STN1 subunit of CST complex1267281786267315714Rat
1307348Nhlrc2NHL repeat containing 21277355619277415940Rat
1306116Fhip2aFHF complex subunit HOOK interacting protein 2A1278198181278224365Rat
1307961Cfap58cilia and flagella associated protein 581271292320271400675Rat
2059Adrb1adrenoceptor beta 11277537585277538985Rat
1307158Ccdc186coiled-coil domain containing 1861277603601277635379Rat
1306731Nrapnebulin-related anchoring protein1277104519277181397Rat
1307021Neurl1neuralized E3 ubiquitin protein ligase 11266953006267038879Rat
1305835Tectbtectorin beta1275957698275976572Rat
1307427Rbm20RNA binding motif protein 201274391932274589816Rat
1305910Sorcs1sortilin-related VPS10 domain containing receptor 11269965824270473097Rat
1308276Calhm2calcium homeostasis modulator family member 21266908367266914093Rat
1308502Trub1TruB pseudouridine synthase family member 11278311362278418347Rat
1309151Smndc1survival motor neuron domain containing 11274096068274107138Rat
1359412Ccdc172coiled-coil domain containing 1721279633655279699234Rat
1311332Taf5TATA-box binding protein associated factor 51266844480266859965Rat
1310764Gsto2glutathione S-transferase omega 21267617517267640455Rat
1310974Sorcs3sortilin-related VPS10 domain containing receptor 31267986305268620331Rat
1560545Cfap43cilia and flagella associated protein 431267511359267598642Rat
1306904Pcgf6polycomb group ring finger 61266811418266831022Rat
1308146Shoc2SHOC2 leucine-rich repeat scaffold protein1274700621274751195Rat
1305481Sfr1SWI5-dependent homologous recombination repair protein 11267505336267509350Rat
1306140Tdrd1tudor domain containing 11277639670277685236Rat
1310668Afap1l2actin filament associated protein 1-like 21277730760277827299Rat
1306156Dclre1aDNA cross-link repair 1A1277335792277355701Rat
1559884Plekhs1pleckstrin homology domain containing S11277261493277294194Rat
1562000Vwa2von Willebrand factor A domain containing 21277689478277730407Rat
1311130Col17a1collagen type XVII alpha 1 chain1267416681267465049Rat
1332901Olr385olfactory receptor 3851272859580272892440Rat
1311185Sh3pxd2aSH3 and PX domains 2A1267039654267245868Rat
1564891Calhm1calcium homeostasis modulator 11266916312266919031Rat
2056Adra2aadrenoceptor alpha 2A1274766283274769083Rat
1584737LOC681006hypothetical protein LOC6810061279937414279944519Rat
1561154RGD1561154similar to heat shock protein 81269557669269559633Rat
1566300RGD1566300similar to RIKEN cDNA E430018M081273350192273376855Rat
1565768Ablim1actin-binding LIM protein 11277853877278043096Rat
1560215Calhm3calcium homeostasis modulator 31266928596266935678Rat
1561333RGD1561333similar to 60S ribosomal protein L81273563411273564250Rat
1563485Atrnl1attractin like 11278546113279098977Rat
1587125LOC679558hypothetical protein LOC6795581272373585272374719Rat
1583621Tcf7l2transcription factor 7 like 21276686911276730517Rat
1587108LOC679575similar to nucleoporin 1331272635442272638628Rat
1590633LOC680527hypothetical protein LOC6805271277332159277332725Rat
1596933LOC678751similar to CWF19-like 2, cell cycle control1271193668271194787Rat
2321699LOC100360658erythropoietin 4 immediate early response1272163273272164720Rat
2322523LOC100360227hypothetical LOC1003602271269893427269894045Rat
2321899Rps12l2ribosomal protein S12-like 21274305975274306634Rat
4888614Mir3584microRNA 35841271275895271275975Rat
6488464Itpripinositol 1,4,5-trisphosphate receptor interacting protein1271252447271272169Rat
6488464Itpripinositol 1,4,5-trisphosphate receptor interacting protein1267649385267673341Rat
6498801Bbip1BBSome interacting protein 11274649085274663544Rat
6502475LOC100909704coiled-coil domain-containing protein 147-like1271763617271771777Rat
6576126Trnak-cuutransfer RNA lysine (anticodon CUU)1271647641271647713Rat
6576126Trnak-cuutransfer RNA lysine (anticodon CUU)1271565594271565666Rat
6576126Trnak-cuutransfer RNA lysine (anticodon CUU)1268204746268204818Rat
6576126Trnak-cuutransfer RNA lysine (anticodon CUU)1267917405267917477Rat
7489025Mir6316microRNA 63161278298675278298775Rat
7525733LOC102547573uncharacterized LOC1025475731277462759277467607Rat
7499870LOC102551352uncharacterized LOC1025513521274167612274169490Rat
7531295LOC102553570uncharacterized LOC1025535701269052718269087074Rat
7536522LOC102554304uncharacterized LOC1025543041276578683276588146Rat
7538657LOC102550567uncharacterized LOC1025505671278185308278191459Rat
7635989LOC102551286uncharacterized LOC1025512861278492169278510244Rat
7651693LOC102554335uncharacterized LOC1025543351270529674270547757Rat
7656374Cfap58l1cilia and flagella associated protein 58-like 11267689258267798291Rat
7656496LOC102547224uncharacterized LOC1025472241277472011277476751Rat
7656844LOC102554592uncharacterized LOC1025545921279687675279697538Rat
7615943LOC102547071uncharacterized LOC1025470711277301333277304680Rat
7573768LOC102556644uncharacterized LOC1025566441279224414279249267Rat
7579721LOC102554215uncharacterized LOC1025542151269907893269938795Rat
7554379LOC102551125uncharacterized LOC1025511251278446119278448983Rat
7678887LOC102550691uncharacterized LOC1025506911274016932274022025Rat
7724246LOC102546997uncharacterized LOC1025469971277034057277060075Rat
7724630LOC102553657uncharacterized LOC1025536571275773325275777345Rat
7726077LOC102552097uncharacterized LOC1025520971275179408275257831Rat
7732484LOC102551695uncharacterized LOC1025516951278513500278525308Rat
7714588LOC102552004heterogeneous nuclear ribonucleoprotein A3-like1278508354278509086Rat
7669753LOC102552122uncharacterized LOC1025521221267075547267088515Rat
7699204LOC102547715uncharacterized LOC1025477151277527890277537329Rat
7718668LOC102546765uncharacterized LOC1025467651277056773277064986Rat
7702517LOC102547814uncharacterized LOC1025478141277554426277592515Rat
7747426LOC102553376uncharacterized LOC1025533761268770344268785318Rat
7709336LOC102553769uncharacterized LOC1025537691275847187275848837Rat
7749911LOC10255035839S ribosomal protein L2, mitochondrial-like1273752087273754357Rat
9099295LOC103691385uncharacterized LOC1036913851278659329278661816Rat
9077421LOC103691379uncharacterized LOC1036913791276643460276650728Rat
9071842LOC103691382uncharacterized LOC1036913821277393490277398952Rat
9311988LOC103691376uncharacterized LOC1036913761276454822276466620Rat
9227213LOC103695066uncharacterized LOC1036950661276407786276415366Rat
9333280LOC103691375uncharacterized LOC1036913751274131210274135595Rat
9250042LOC10369138440S ribosomal protein S19 pseudogene1278878225278882489Rat
9369327LOC103691394zinc finger protein 120-like1274421506274435600Rat
9261776LOC103691381uncharacterized LOC1036913811277323096277325843Rat
9317170LOC103691378uncharacterized LOC1036913781276324383276325943Rat
9432936LOC103691396putative cuticle collagen 1551278421433278429811Rat
9395760LOC103691383uncharacterized LOC1036913831277922877277927427Rat
9414347LOC103691380uncharacterized LOC1036913801276902174276957144Rat
9454647LOC103691371uncharacterized LOC1036913711267440213267474903Rat
11360253LOC108349827uncharacterized LOC1083498271278812558278815497Rat
11454345LOC10834979540S ribosomal protein S12 pseudogene1267603904267604344Rat
11435417LOC108349530uncharacterized LOC1083495301267009287267013687Rat
11458831LOC108349701uncharacterized LOC1083497011278459200278463109Rat
11459736LOC10834986660S ribosomal protein L17 pseudogene1267266451267267020Rat
11368029LOC108349675uncharacterized LOC1083496751277041308277047680Rat
11430725Trnak-cuu4transfer RNA lysine (anticodon CUU) 41271647641271647713Rat
11415116LOC108349045uncharacterized LOC1083490451273814339273817825Rat
11396518LOC10834979440S ribosomal protein S8 pseudogene1267349529267350766Rat
11392331LOC108349650uncharacterized LOC1083496501275803826275825516Rat
11496109Trnak-cuu2transfer RNA lysine (anticodon CUU) 21268204746268204818Rat
11509215LOC108349704uncharacterized LOC1083497041279652800279661387Rat
11498043LOC108349609uncharacterized LOC1083496091274067100274088364Rat
11498515LOC108349796uncharacterized LOC1083497961278116999278140064Rat
11499189LOC108349828uncharacterized LOC1083498281279121539279127159Rat
11514905Trnak-cuu1transfer RNA lysine (anticodon CUU) 11267917405267917477Rat
11483950Trnak-cuu3transfer RNA lysine (anticodon CUU) 31271565594271565666Rat
11516962LOC108349533uncharacterized LOC1083495331267282064267285408Rat
11516969LOC10834970860S ribosomal protein L21 pseudogene1267710950267711513Rat
11517691LOC108349710uncharacterized LOC1083497101274040628274045448Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10097D1Smu21291274755723274755851Ratregion
10105D1Smu11691277550706277550874Ratregion
10805D1Mgh131491266793821266793958Ratregion
34194D1Mgh141491278228767278228889Ratregion
34232D1Mgh151501276025915276026074Ratregion
36169D1Rat891711279985909279986079Ratregion
36828D1Rat851601273433632273433763Ratregion
37896D1Rat1261501277301397277301526Ratregion
37956D1Rat1952101279168097279168312Ratregion
36524D1Rat871671276479854276480020Ratregion
36703D1Rat861461273791893273792054Ratregion
35655D1Rat841661273986848273987019Ratregion
38618D1Rat1661391269279863269280007Ratregion
39420D1Rat3112481278312376278312615Ratregion
42090D1Arb462901266793776266794071Ratregion
42544D1Rat4542391267076330267076557Ratregion
42546D1Rat4772051272402479272402662Ratregion
42547D1Rat4562051276258539276258745Ratregion
42551D1Rat4621491276025915276026073Ratregion
40810D13Rat1092021277040928277041135Ratregion
41060D1Rat3071201266948159266948272Ratregion
41822D1Rat4522061267012043267012248Ratregion
43442D1Got2391181267240424267240541Ratregion
43443D1Got2471221268570074268570193Ratregion
43444D1Got2491491268003021268003169Ratregion
43447D1Got2502791273787505273787781Ratregion
43448D1Got2511661275138749275138914Ratregion
43449D1Got2531431273930544273930686Ratregion
43450D1Got2522021274129118274129316Ratregion
43451D1Got2571661275679109275679274Ratregion
43454D1Got2541831278977845278978026Ratregion
43456D1Got2562761276138396276138671Ratregion
43457D1Got2552271278666867278667093Ratregion
60228D1Got2421561269724798269724953Ratregion
60229D1Got2432961270343685270343980Ratregion
60230D1Got2442191269885608269885826Ratregion
629595D1Hmgc21771271634068271634244Ratregion
629595D1Hmgc21771267930651267930827Ratregion
629596D1Hmgc31541268665896268666049Ratregion
67781D1Uwm91641278612246278612411Ratregion
1576371D1Ztm52981272813582272813879Ratregion
1576377D1Ztm41651272801713272801877Ratregion
1576379D1Ztm62381272815807272816044Ratregion
1576390D1Ztm32791272801622272801900Ratregion
1632205D1Got3691151275227058275227167Ratregion
1600314D1Swe62821270435354270435635Ratregion
1600318D1Swe22041268752165268752368Ratregion
1600320D1Swe42011269633949269634149Ratregion
1600322D1Swe32581269078726269078983Ratregion
1600324D1Swe82101274353782274353991Ratregion
1600326D1Swe72061274104580274104785Ratregion
1600328D1Swe52941270282616270282909Ratregion
1641442D1Got3512151271299394271299608Ratregion
1641442D1Got3512151267696332267696546Ratregion
1641588D1Cebr42891278444654278444942Ratregion
1633133D1Got3522301272779876272780107Ratregion
1633380D1Got4081891269727358269727546Ratregion
7192160Gfra101279571144279572280Ratregion
7192160Gfra101278478808278479944Ratregion
7192876Ins21841272800145272800328Ratregion
7193086AA8931441061278652822278652927Ratregion
7192481Ins13121272799979272800290Ratregion
5035833PMC21231P13011272799968272800268Ratregion
5035835PMC21334P12291272800022272800250Ratregion
5038902RH1273981801274089854274090033Ratregion
5036374Ins23001272799972272800271Ratregion
5039060RH1274892001278224061278224260Ratregion
5036803AU0492561871275406644275406830Ratregion
5031268PMC123023P17071272799995272800203Ratregion
5026210RH1313362141279927384279927597Ratregion
5031538AU0479992931270132136270132423Ratregion
5034662BF3908301851274040659274040843Ratregion
5029349RH1444581841278192815278192998Ratregion
5034780AA8931442031278652723278652927Ratregion
5026840RH1337312031274647363274648181Ratregion
5029437Tcf7l22741276728538276728811Ratregion
5035084WIAF-16761371277109882277110018Ratregion
5026976RH1342512171266793965266794181Ratregion
5027018RH1344192141275844039275844252Ratregion
5029585BE1013861651274100183274100880Ratregion
5029653BF3866521661277936908277937073Ratregion
5035382BE1072511521266907798266907949Ratregion
5027115STS-F04204621275845159275845220Ratregion
5027179SHGC-1520962231268995694268995916Ratregion
5029869BE0970271681267037893267038060Ratregion
5027349AA9865401391272800189272800327Ratregion
5029965BF3882711911274092211274092401Ratregion
5027549AW5556411071279098532279098638Ratregion
5032943RH1370471531277335865277336017Ratregion
5030257BE0996641531279203095279203247Ratregion
502782502.MMHAP26FLA2.seq2131273464364273464585Ratregion
502787118.MMHAP22FRF9.seq1471277011464277011610Ratregion
5033405RH1387141511276721368276721518Ratregion
5025626RH1290411901273708246273708934Ratregion
5025626RH1290411901273708246273708435Ratregion
5030907BF4112741171278462859278462975Ratregion
5052031RH947993001272799949272800248Ratregion
5053423RH1426401371276728675276728811Ratregion
5053807RH1428621311270467911270468041Ratregion
5053993RH1429691641267044910267045073Ratregion
5053997RH1429711461277409123277409268Ratregion
5051935RH947431701274755679274755846Ratregion
5054327RH1431602201267387507267387726Ratregion
5055263RH1437001341278202783278202916Ratregion
5059426AW5307051571270456233270456389Ratregion
5055509RH1438421411277827017277827157Ratregion
5055703RH1439541091276385553276385661Ratregion
5058574AI5492141901277730848277731037Ratregion
5056203RH1442432921274803402274803693Ratregion
5056245RH1442672091270110403270110611Ratregion
5056327RH1443141111274648692274648802Ratregion
5056931RH1446631551275783827275783981Ratregion
5056809RH1445931661277896927277897092Ratregion
5055481RH1438261121274030891274031002Ratregion
5058956BF3872991801271243329271243508Ratregion
5058956BF3872991801267640267267640446Ratregion
5059844BF3880331741277966818277966991Ratregion
5055641RH1439181821274391254274391435Ratregion
5058320BG3762471101274088835274088944Ratregion
5058466BI2903371701271276144271276313Ratregion
5058466BI2903371701267673082267673251Ratregion
5050336RH1339971951267417566267417760Ratregion
5053355RH1426011471279096643279096789Ratregion
5059244BF3878471501277894509277894658Ratregion
5057824BF3862221511277588847277588997Ratregion
5052565AA5895082591267039752267040010Ratregion
5050914RH1343312151277217914277218128Ratregion
5051006RH1343832171267509028267509244Ratregion
5054833RH1434511411267417538267417678Ratregion
5043240RH1299122201266906963266907182Ratregion
5044520RH1306501821278418889278419070Ratregion
5044786RH1308031981276035920276036117Ratregion
5041308RH1287821981276578740276578937Ratregion
5045402RH1311572101279807267279808383Ratregion
5046228RH1316322151277464160277464374Ratregion
5041662RH1289861961269970439269970634Ratregion
5044618RH1307072041274752240274752434Ratregion
5044444RH1306061881279946883279947070Ratregion
5047564RH1324002051276289771276289975Ratregion
5047644RH1324462121279415771279415982Ratregion
5047644RH1324462121279311075279311286Ratregion
5047666RH1324581971277104652277105432Ratregion
5045712RH1313352091276291418276291626Ratregion
5047774RH1325212081278556693278556900Ratregion
5046666RH1318852131273836431273836643Ratregion
5049024RH1332422101278949394278949603Ratregion
5049730RH1336481651273364093273364257Ratregion
5049786RH1336812041267416710267416913Ratregion
5039690RH1278512031266811632266811834Ratregion
5039858RH1279471841271252564271252747Ratregion
5039858RH1279471841267649502267649685Ratregion
5039928RH1279882041267039922267040125Ratregion
5042090RH1292332161273708411273708626Ratregion
5043248RH1299172141277855476277855689Ratregion
5039674RH1278412191273961661273961879Ratregion
7191238Tcf7l211651276728695276729859Ratregion
5042374RH1293971881274096711274096898Ratregion
5040710RH1284392031274107434274108124Ratregion
5041098RH1286611891277854137277854325Ratregion
5041198RH1287182181266859680266859897Ratregion
5043646RH1301451951279098425279098619Ratregion
5072300RH1367692371267038573267038809Ratregion
5076472RH1391951321267414376267414507Ratregion
5074770RH1382081411277604531277604669Ratregion
5076202RH1390381281267044801267044928Ratregion
5078062RH1401221881276851264276851451Ratregion
5079780RH1411992031266908426266908628Ratregion
5077838RH1399891801274768741274768920Ratregion
5080206RH1414461821277908067277908248Ratregion
5078446RH1403481201269966053269966172Ratregion
5070696RH1346521911277284612277284802Ratregion
5080364RH1415372121266793628266793839Ratregion
5080470RH1415971811274586942274587122Ratregion
5071530RH1351351831275700711275700893Ratregion
5074216RH1378881431270285420270285562Ratregion
5064968BF405363901279052099279052190Ratregion
5066634AU0482412431271348264271348506Ratregion
5066634AU0482412431267745202267745444Ratregion
5067354AU0478051841278489759278489942Ratregion
5067648AU0476191461275458466275458611Ratregion
5067874AU0474841201272334562272334681Ratregion
5068482AU0471191801276951753276951929Ratregion
5068674AU0470021421273203510273203651Ratregion
5068674AU0470021421273200778273200919Ratregion
5069168AU0466792181269503409269503626Ratregion
5070410AI840429931279947166279947258Ratregion
5060080BF3884501521278460688278460839Ratregion
5061958BI2944722431278416990278417232Ratregion
5063674BE1079511841270114471270114654Ratregion
5062172BE1128772041274646850274647053Ratregion
5060904BF3959462111274677452274677662Ratregion
5064356BI3020811861273299480273299667Ratregion
5061876AW5339561561273841473273841630Ratregion
5063660BE1079302131274703392274703604Ratregion
5065228BE1212341601274309912274310071Ratregion
5063864AW5290531941279207644279207837Ratregion
5060790BF3891461601274754971274755130Ratregion
5060830BF4011231631270393697270393859Ratregion
5062570BE1068671501275985720275985869Ratregion
5064266BE1209421571279106026279106182Ratregion
5064432BF3992031631277408343277408505Ratregion
5062960BF3981151651276722056276722686Ratregion
5064556BF3993611741277854572277854745Ratregion
5061234BE1113041791274248144274248322Ratregion
5061396BF3963251461276007567276007712Ratregion
5063190BE1138782081279978320279978527Ratregion
5082295BE1191151851266879655266879839Ratregion
5087688UniSTS:1410431001277538836277538935Ratregion
5088931AU0488551461270709241270709340Ratregion
5088931AU0488551461270709195270709340Ratregion
5089857AU0494042311271278458271278688Ratregion
5089857AU0494042311267675396267675626Ratregion
5088163AU0484052561276823327276823577Ratregion
5085316BQ2012941711267041957267042101Ratregion
5085549BE0977691541276242350276242503Ratregion
5085559BM3905581761277494805277494980Ratregion
5080774RH1417742091277462822277463030Ratregion
5090385AU0497192711274299962274301025Ratregion
5090609AU0498541971273104940273105136Ratregion
5080858RH1418231841278223360278223543Ratregion
5084428AA9448481981277905584277905781Ratregion
5086284BQ2061422171274756072274756289Ratregion
5084778AI4108951441277414175277414318Ratregion
5083287BG3808721461279102828279102973Ratregion
5086506AI5020212161276721619276721834Ratregion
5083745AA8915861351276322689276322823Ratregion
5135430D1Hmgc161941271693775271693968Ratregion
5135430D1Hmgc161941267871151267871344Ratregion
5503918Adrb15221277537858277538379Ratregion
5527120D1Hmgc191491270462331270462479Ratregion
5527274D1Hmgc201301267241552267241681Ratregion
5527390D1Hmgc211931269024611269024803Ratregion
5504216RH799411861278880797278880982Ratregion
5504918Casp7941277242214277242307Ratregion
5505490GDB:602855201273067753273069056Ratregion
5501730UniSTS:2670032181272800073272800290Ratregion
550015917.MMHAP36FRF8.seq11741274374967274376140Ratregion
5500308GDB:1798751001273523119273523218Ratregion
5501019PMC123023P33321272799960272800291Ratregion
5501657PMC24644P61881272800098272800285Ratregion
5502228Ins13021272799971272800272Ratregion
5502678Acsl5741276284701276284973Ratregion
5502977Gfra101279571144279572281Ratregion
5502977Gfra101278478808278479945Ratregion
Position Markers

Flank 1: (D1Mgh13)
Rat AssemblyChrPosition (strand)Source
Rnor_6.01266,793,821 - 266,793,958NCBI
Rnor_5.01274,224,224 - 274,224,361UniSTS
RGSC_v3.41252,340,389 - 252,340,527RGD
RGSC_v3.41252,340,390 - 252,340,527UniSTS
RGSC_v3.11252,604,962 - 252,605,100RGD
Celera1241,679,423 - 241,679,560UniSTS
RH 3.4 Map11641.5RGD
RH 3.4 Map11641.5UniSTS
RH 2.0 Map11237.1RGD
Cytogenetic Map1q54UniSTS
Flank 2: (D1Rat89)
Rat AssemblyChrPosition (strand)Source
Rnor_6.01279,985,909 - 279,986,079NCBI
Rnor_5.01287,349,660 - 287,349,830UniSTS
RGSC_v3.41265,343,447 - 265,343,617UniSTS
RGSC_v3.41265,343,371 - 265,343,617RGD
RGSC_v3.11265,554,492 - 265,554,662RGD
Celera1253,635,242 - 253,635,412UniSTS
RH 3.4 Map11692.3RGD
RH 3.4 Map11692.3UniSTS
RH 2.0 Map11311.6999RGD
SHRSP x BN Map1145.88RGD
Cytogenetic Map1q55UniSTS


QTLs in Region (Rnor_6.0)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
70211Niddm24Non-insulin dependent diabetes mellitus QTL 243.79blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1236795785281795785Rat
631215Stl8Serum triglyceride level QTL 89.270.0001blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)1245529606282763074Rat
2302040Pia35Pristane induced arthritis QTL 353.80.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)1236265430281265430Rat
2302378Insul11Insulin level QTL 113.25blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1156446196274977688Rat
724531Uae5Urinary albumin excretion QTL 54urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)1161321152273792054Rat
724533Rf51Renal function QTL 515.30.0002kidney plasma flow trait (VT:0005524)renal plasma flow (CMO:0001914)1238830534278228767Rat
724538Kidm1Kidney mass QTL 13.2kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1233663100273792054Rat
724552Glom2Glomerulus QTL 23.30.0001kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli directly contacting the kidney surface (CMO:0001001)1243272341282763074Rat
734767Niddm57Non-insulin dependent diabetes mellitus QTL 57body mass (VT:0001259)body weight (CMO:0000012)1244401175282365384Rat
734768Niddm59Non-insulin dependent diabetes mellitus QTL 59body mass (VT:0001259)body weight (CMO:0000012)1235850810280850810Rat
734769Niddm58Non-insulin dependent diabetes mellitus QTL 58body mass (VT:0001259)body weight (CMO:0000012)1244992467282365384Rat
631669Iddm9Insulin dependent diabetes mellitus QTL 92.80.039blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)1252955158280632620Rat
631690Scl5Serum cholesterol level QTL 52.1blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)1258132568282763074Rat
1354580Scort1Serum corticosterone level QTL 13.4blood corticosterone amount (VT:0005345)blood corticosterone level (CMO:0001172)1167394665278228889Rat
1581544Rf52Renal function QTL 520.05total urine protein amount (VT:0000032)urine protein excretion rate to body weight ratio (CMO:0001099)1252948438281795785Rat
731175Uae20Urinary albumin excretion QTL 203.50.0018urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1241482188281795785Rat
738032Hcas5Hepatocarcinoma susceptibility QTL 53.12liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)1191825895279986079Rat
631536Lnnr2Liver neoplastic nodule remodeling QTL 22.90.0005liver integrity trait (VT:0010547)liver remodeling tumorous lesion number to liver total tumorous lesion number ratio (CMO:0001705)1255728828282763074Rat
1598821Rf55Renal function QTL 556.3renal blood flow trait (VT:2000006)ratio of change in renal blood flow to change in renal perfusion pressure (CMO:0001239)1238824734279986079Rat
1598839Rf56Renal function QTL 56renal blood flow trait (VT:2000006)ratio of change in renal blood flow to change in renal perfusion pressure (CMO:0001239)1266793821279986079Rat
2300175Bmd40Bone mineral density QTL 4015.40.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)1221901238266901238Rat
2293655Bss36Bone structure and strength QTL 3610.660.0001femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)1221901238266901238Rat
2293674Bss39Bone structure and strength QTL 397.10.0001femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)1221901238266901238Rat
2293694Bss38Bone structure and strength QTL 387.050.0001femur strength trait (VT:0010010)femur stiffness (CMO:0001674)1221901238266901238Rat
631836Stl31Serum triglyceride level QTL 314.640.00000487blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)1259295704282763074Rat
631837Niddm35Non-insulin dependent diabetes mellitus QTL 350.01blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1258709726281795785Rat
631843Bw116Body weight QTL 1164.10.016abdominal adipose amount (VT:1000220)abdominal fat pad weight (CMO:0000088)1244401175282365384Rat
634313Niddm43Non-insulin dependent diabetes mellitus QTL 43blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1217054291281795785Rat
1357399Bw45Body weight QTL 453.05body mass (VT:0001259)body mass index (BMI) (CMO:0000105)1225689973270689973Rat
1357404Bw42Body weight QTL 424.490.0001body mass (VT:0001259)body weight (CMO:0000012)1225689973270689973Rat
1600384Niddm66Non-insulin dependent diabetes mellitus QTL 660.000005blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1274353782275138914Rat
1600388Niddm67Non-insulin dependent diabetes mellitus QTL 675.840.000004blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1213476630278978026Rat
1600390Niddm64Non-insulin dependent diabetes mellitus QTL 640.003blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1268570074269078983Rat
1600392Bw123Body weight QTL 1230.001body mass (VT:0001259)body weight (CMO:0000012)1244087148282763074Rat
1600395Niddm69Non-insulin dependent diabetes mellitus QTL 694.140.0002blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)1213476630278978026Rat
1600396Niddm68Non-insulin dependent diabetes mellitus QTL 684.970.0003blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1213476630278978026Rat
1600397Edcs4Endometrial carcinoma susceptibility QTL 42.2uterus morphology trait (VT:0001120)percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)1226706329271706329Rat
1600399Niddm65Non-insulin dependent diabetes mellitus QTL 650.004blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1269633949270137485Rat
1578759Uae30Urinary albumin excretion QTL 303.30.003urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1161321256273791893Rat
1578763Kidm29Kidney mass QTL 293.30.0001kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1196395041282763074Rat
1578778Pur4Proteinuria QTL 43.30.003total urine protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)1161321256273791893Rat
1300108Rf8Renal function QTL 83.75renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)1249206242281795785Rat
1354610Bw34Body weight QTL 344.1body mass (VT:0001259)body weight (CMO:0000012)1161784169278228889Rat
1354624Cm35Cardiac mass QTL355.7heart left ventricle mass (VT:0007031)calculated heart weight (CMO:0000073)1192639698278228889Rat
1354646Kidm18Kidney mass QTL 185.7kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1161784169278228889Rat
1354652Kidm20Kidney mass QTL 204.3kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1192639698278228889Rat
1354661Bw33Body weight QTL 335.2body mass (VT:0001259)body weight (CMO:0000012)1161784169278228889Rat
1549910Bw54Body weight QTL 540.05body mass (VT:0001259)body weight (CMO:0000012)1236795785281795785Rat
2316896Gluco57Glucose level QTL 577.2blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1249607907266793958Rat
1549837Hcar15Hepatocarcinoma resistance QTL 150.05liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)1163796316282763074Rat
1358890Bp259Blood pressure QTL 2593.06arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1230420627282645769Rat
1358898Bp255Blood pressure QTL 2553.6arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1208517798266948272Rat
61327Eae7Experimental allergic encephalomyelitis QTL 75.6body mass (VT:0001259)change in body weight (CMO:0002045)1236265430281265430Rat
61400Niddm1Non-insulin dependent diabetes mellitus QTL 111blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1238830408266793958Rat
7394701Uae46Urinary albumin excretion QTL 463.60.0056urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1221901238266901238Rat
7387289Uae45Urinary albumin excretion QTL 452.860.0021urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1244148899282763074Rat
10053715Scort24Serum corticosterone level QTL 242.130.0088blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)1242302911282763074Rat
10059587Bw173Body weight QTL 1733.230.025body mass (VT:0001259)body weight (CMO:0000012)1222492538267492538Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_disease QTL defines a region containing a gene or genes associated with impaired autoregulation of RBF, proteinuria, and glomerular disease in FHH rats 1579884